Guide to the Human Genome
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Name: AGXT2L2 Sequence: fasta or formatted (450aa) NCBI GI: 24119277
Description:

alanine-glyoxylate aminotransferase 2-like 2

Referenced in:

Amino Acid Biosynthesis and Selected Derivatives

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         43           2
 C cysteine            1.8          8           1
 D aspartate           5.6         25           1
 E glutamate           5.6         25           2
 F phenylalanine       4.4         20           2
 G glycine             7.3         33           2
 H histidine           3.8         17           1
 I isoleucine          4.4         20           2
 K lysine              4.4         20           1
 L leucine             8.9         40           2
 M methionine          1.6          7           1
 N asparagine          3.6         16           1
 P proline             5.3         24           2
 Q glutamine           5.8         26           2
 R arginine            5.3         24           1
 S serine              5.6         25           3
 T threonine           3.6         16           1
 V valine              9.6         43           3
 W tryptophan          0.4          2           1
 Y tyrosine            3.6         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   alanine-glyoxylate aminotransferase 2-like 2 
AGXT2L1               0.665   alanine-glyoxylate aminotransferase 2-like 1 isoform...
AGXT2L1               0.640   alanine-glyoxylate aminotransferase 2-like 1 isofor...
AGXT2L1               0.583   alanine-glyoxylate aminotransferase 2-like 1 isofor...
AGXT2                 0.253   alanine-glyoxylate aminotransferase 2 precursor [Hom...
OAT                   0.118   ornithine aminotransferase precursor 
ABAT                  0.062   4-aminobutyrate aminotransferase precursor 
ABAT                  0.062   4-aminobutyrate aminotransferase precursor 
ABAT                  0.062   4-aminobutyrate aminotransferase precursor 
LOC730658             0.008   PREDICTED: similar to UPF0634 protein KIAA1641 [Hom...
ANKRD36               0.008   PREDICTED: ankyrin repeat domain 36 
LOC645685             0.007   PREDICTED: hypothetical protein 
SFRS9                 0.006   splicing factor, arginine/serine-rich 9 
LOC645685             0.006   PREDICTED: hypothetical protein 
LOC645685             0.006   PREDICTED: hypothetical protein 
SFRS1                 0.006   splicing factor, arginine/serine-rich 1 isoform 2 [...
SFRS1                 0.006   splicing factor, arginine/serine-rich 1 isoform 1 [Ho...
ANKRD36B              0.005   ankyrin repeat domain 36B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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