Guide to the Human Genome
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Name: ZFP30 Sequence: fasta or formatted (519aa) NCBI GI: 7662408
Description:

zinc finger protein 30 homolog

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.9         15           1
 C cysteine            6.6         34           1
 D aspartate           2.5         13           1
 E glutamate           9.6         50           2
 F phenylalanine       4.2         22           2
 G glycine             5.8         30           1
 H histidine           6.6         34           2
 I isoleucine          4.2         22           1
 K lysine             10.4         54           2
 L leucine             7.9         41           2
 M methionine          1.2          6           1
 N asparagine          1.7          9           1
 P proline             3.1         16           1
 Q glutamine           6.7         35           2
 R arginine            7.7         40           2
 S serine              5.4         28           2
 T threonine           5.2         27           2
 V valine              3.1         16           2
 W tryptophan          0.8          4           1
 Y tyrosine            4.4         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 30 homolog 
ZFP82                 0.754   zinc finger protein 82 homolog 
ZFP14                 0.669   zinc finger protein 14-like 
ZNF420                0.547   zinc finger protein 420 
ZNF780A               0.526   zinc finger protein 780A isoform a 
ZNF780B               0.525   zinc finger protein 780B 
ZNF546                0.522   zinc finger protein 546 
ZNF780A               0.521   zinc finger protein 780A isoform b 
ZNF780A               0.521   zinc finger protein 780A isoform b 
ZNF565                0.513   zinc finger protein 565 
ZNF565                0.513   zinc finger protein 565 
ZNF790                0.511   zinc finger protein 790 
ZNF461                0.507   gonadotropin inducible transcription repressor 1 [Ho...
ZNF283                0.507   zinc finger protein 283 
ZNF540                0.502   zinc finger protein 540 
ZNF30                 0.500   zinc finger protein 30 isoform a 
ZNF30                 0.500   zinc finger protein 30 isoform a 
ZNF607                0.497   zinc finger protein 607 
ZNF30                 0.494   zinc finger protein 30 isoform b 
ZNF571                0.493   zinc finger protein 571 
ZNF471                0.492   zinc finger protein 471 
LOC100291520          0.491   PREDICTED: hypothetical protein XP_002347975 isofor...
ZNF583                0.484   zinc finger protein 583 
ZNF583                0.484   zinc finger protein 583 
ZNF583                0.484   zinc finger protein 583 
ZNF708                0.478   zinc finger protein 708 
ZNF383                0.478   zinc finger protein 383 
ZNF85                 0.477   zinc finger protein 85 
ZNF98                 0.475   zinc finger protein 98 
DKFZp686E2433         0.471   hypothetical protein LOC345462 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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