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Search of human proteins with 7661910
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7661910 tetratricopeptide repeat domain 35 [Homo sapiens]
(297 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7661910 tetratricopeptide repeat domain 35 [Homo sapiens] 597 e-171
gi|60685231 tetratricopeptide repeat domain 7B [Homo sapiens] 44 1e-04
gi|116089292 tetratricopeptide repeat domain 21B [Homo sapiens] 43 3e-04
gi|110225358 tetratricopeptide repeat domain 7A [Homo sapiens] 42 7e-04
gi|33457330 tetratricopeptide repeat domain 14 isoform a [Homo s... 40 0.002
gi|5453980 DnaJ (Hsp40) homolog, subfamily C, member 3 [Homo sap... 40 0.003
gi|83415184 transmembrane and tetratricopeptide repeat containin... 39 0.007
gi|14589866 aspartate beta-hydroxylase isoform a [Homo sapiens] 37 0.016
gi|126273559 plasma carboxypeptidase B2 isoform b [Homo sapiens] 35 0.10
gi|169204626 PREDICTED: hypothetical protein [Homo sapiens] 33 0.23
gi|239750266 PREDICTED: hypothetical protein [Homo sapiens] 33 0.23
gi|239744574 PREDICTED: hypothetical protein [Homo sapiens] 33 0.23
gi|154813191 IQ motif containing E isoform 1 [Homo sapiens] 33 0.23
gi|27262638 sperm associated antigen 1 [Homo sapiens] 33 0.23
gi|27262636 sperm associated antigen 1 [Homo sapiens] 33 0.23
gi|154813193 IQ motif containing E isoform 2 [Homo sapiens] 33 0.23
gi|7661950 SH2 domain binding protein 1 [Homo sapiens] 33 0.30
gi|30581135 structural maintenance of chromosomes 1A [Homo sapiens] 33 0.39
gi|110611917 tetratricopeptide repeat domain 14 isoform b [Homo ... 33 0.39
gi|32307150 O-linked GlcNAc transferase isoform 2 [Homo sapiens] 32 0.67
gi|32307148 O-linked GlcNAc transferase isoform 1 [Homo sapiens] 32 0.67
gi|221219056 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform... 32 0.67
gi|221219053 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform... 32 0.67
gi|22095349 WD and tetratricopeptide repeats 1 [Homo sapiens] 32 0.88
gi|31542980 interferon-induced protein with tetratricopeptide re... 32 0.88
gi|72534658 interferon-induced protein with tetratricopeptide re... 32 0.88
gi|58761544 amine oxidase (flavin containing) domain 2 isoform a... 32 0.88
gi|58761546 amine oxidase (flavin containing) domain 2 isoform b... 32 0.88
gi|239756104 PREDICTED: tetratricopeptide repeat domain 6 [Homo ... 31 1.1
gi|239750633 PREDICTED: tetratricopeptide repeat domain 6 [Homo ... 31 1.1
>gi|7661910 tetratricopeptide repeat domain 35 [Homo sapiens]
Length = 297
Score = 597 bits (1538), Expect = e-171
Identities = 297/297 (100%), Positives = 297/297 (100%)
Query: 1 MAKVSELYDVTWEEMRDKMRKWREENSRNSEQIVEVGEELINEYASKLGDDIWIIYEQVM 60
MAKVSELYDVTWEEMRDKMRKWREENSRNSEQIVEVGEELINEYASKLGDDIWIIYEQVM
Sbjct: 1 MAKVSELYDVTWEEMRDKMRKWREENSRNSEQIVEVGEELINEYASKLGDDIWIIYEQVM 60
Query: 61 IAALDYGRDDLALFCLQELRRQFPGSHRVKRLTGMRFEAMERYDDAIQLYDRILQEDPTN 120
IAALDYGRDDLALFCLQELRRQFPGSHRVKRLTGMRFEAMERYDDAIQLYDRILQEDPTN
Sbjct: 61 IAALDYGRDDLALFCLQELRRQFPGSHRVKRLTGMRFEAMERYDDAIQLYDRILQEDPTN 120
Query: 121 TAARKRKIAIRKAQGKNVEAIRELNEYLEQFVGDQEAWHELAELYINEHDYAKAAFCLEE 180
TAARKRKIAIRKAQGKNVEAIRELNEYLEQFVGDQEAWHELAELYINEHDYAKAAFCLEE
Sbjct: 121 TAARKRKIAIRKAQGKNVEAIRELNEYLEQFVGDQEAWHELAELYINEHDYAKAAFCLEE 180
Query: 181 LMMTNPHNHLYCQQYAEVKYTQGGLENLELSRKYFAQALKLNNRNMRALFGLYMSASHIA 240
LMMTNPHNHLYCQQYAEVKYTQGGLENLELSRKYFAQALKLNNRNMRALFGLYMSASHIA
Sbjct: 181 LMMTNPHNHLYCQQYAEVKYTQGGLENLELSRKYFAQALKLNNRNMRALFGLYMSASHIA 240
Query: 241 SNPKASAKTKKDNMKYASWAASQINRAYQFAGRSKKETKYSLKAVEDMLETLQITQS 297
SNPKASAKTKKDNMKYASWAASQINRAYQFAGRSKKETKYSLKAVEDMLETLQITQS
Sbjct: 241 SNPKASAKTKKDNMKYASWAASQINRAYQFAGRSKKETKYSLKAVEDMLETLQITQS 297
>gi|60685231 tetratricopeptide repeat domain 7B [Homo sapiens]
Length = 843
Score = 44.3 bits (103), Expect = 1e-04
Identities = 38/152 (25%), Positives = 62/152 (40%), Gaps = 12/152 (7%)
Query: 38 EELINEYASKLGDDI--------WIIYEQVMIAALDY----GRDDLALFCLQELRRQFPG 85
E+ ++E AS L W+ Q+ + A + G+ A C QE FP
Sbjct: 669 EQALSEVASSLQSSAPKQGPLHPWMTLAQIWLHAAEVYIGIGKPAEATACTQEAANLFPM 728
Query: 86 SHRVKRLTGMRFEAMERYDDAIQLYDRILQEDPTNTAARKRKIAIRKAQGKNVEAIRELN 145
SH V + G E D+A + Y+ L PT+ + +R I G+ A + L
Sbjct: 729 SHNVLYMRGQIAELRGSMDEARRWYEEALAISPTHVKSMQRLALILHQLGRYSLAEKILR 788
Query: 146 EYLEQFVGDQEAWHELAELYINEHDYAKAAFC 177
+ ++ E W+ L E+ + + A A C
Sbjct: 789 DAVQVNSTAHEVWNGLGEVLQAQGNDAAATEC 820
Score = 30.4 bits (67), Expect = 2.0
Identities = 27/134 (20%), Positives = 58/134 (43%), Gaps = 7/134 (5%)
Query: 156 EAWHELAELYINEHDYAKAAFCLEELMMTNPHNHLYCQQYAEVKYTQGGLENLELSRKYF 215
+ W AE+YI A+A C +E P +H ++ +G ++ +R+++
Sbjct: 697 QIWLHAAEVYIGIGKPAEATACTQEAANLFPMSHNVLYMRGQIAELRGSMDE---ARRWY 753
Query: 216 AQALKLNNRNMRALFGLYMSASHIASNPKASAKTKKDNMKYASWAA---SQINRAYQFAG 272
+AL ++ +++++ L + H + K +D ++ S A + + Q G
Sbjct: 754 EEALAISPTHVKSMQRLAL-ILHQLGRYSLAEKILRDAVQVNSTAHEVWNGLGEVLQAQG 812
Query: 273 RSKKETKYSLKAVE 286
T+ L A+E
Sbjct: 813 NDAAATECFLTALE 826
>gi|116089292 tetratricopeptide repeat domain 21B [Homo sapiens]
Length = 1316
Score = 43.1 bits (100), Expect = 3e-04
Identities = 40/197 (20%), Positives = 79/197 (40%), Gaps = 32/197 (16%)
Query: 99 AMERYDDAIQLYDRILQEDPTNTAARKRKIAIRKAQGKNVEAIRELNEYLEQFVGDQEAW 158
A Y+ AI+ Y L T+ + AQ +R+ L+ ++ A
Sbjct: 896 AQRDYEKAIKFYREALVHCETDNKIMLELARLYLAQDDPDSCLRQCALLLQSDQDNEAAT 955
Query: 159 HELAELYINEHDYAKAAFCLEELMMTNPHNHLYCQQYAEVKYTQGGLENLELSRKYFAQA 218
+A+L + DY +A F L++L+ P N++ + ++ G LE++ ++F+ A
Sbjct: 956 MMMADLMFRKQDYEQAVFHLQQLLERKPDNYMTLSRLIDLLRRCGKLEDVP---RFFSMA 1012
Query: 219 LKLNNR-----NMRALFGLYMSASHIASNPKASAKTKKDNMKYASWAASQINRAYQFAGR 273
K N+R + GLY+ W + N A + +
Sbjct: 1013 EKRNSRAKLEPGFQYCKGLYL------------------------WYTGEPNDALRHFNK 1048
Query: 274 SKKETKYSLKAVEDMLE 290
++K+ + A+ +M+E
Sbjct: 1049 ARKDRDWGQNALYNMIE 1065
>gi|110225358 tetratricopeptide repeat domain 7A [Homo sapiens]
Length = 858
Score = 42.0 bits (97), Expect = 7e-04
Identities = 31/117 (26%), Positives = 47/117 (40%), Gaps = 4/117 (3%)
Query: 52 IWIIYEQVMIAALDYGRDDLAL----FCLQELRRQFPGSHRVKRLTGMRFEAMERYDDAI 107
+W EQ+ + A + + L FC+QE FP SH V + G E ++A
Sbjct: 706 LWTTLEQIWLQAAELFMEQQHLKEAGFCIQEAAGLFPTSHSVLYMRGRLAEVKGNLEEAK 765
Query: 108 QLYDRILQEDPTNTAARKRKIAIRKAQGKNVEAIRELNEYLEQFVGDQEAWHELAEL 164
QLY L +P + G A + L + +E+ EAW L E+
Sbjct: 766 QLYKEALTVNPDGVRIMHSLGLMLSRLGHKSLAQKVLRDAVERQSTCHEAWQGLGEV 822
Score = 41.6 bits (96), Expect = 8e-04
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 14/146 (9%)
Query: 155 QEAWHELAELYINEHDYAKAAFCLEEL--MMTNPHNHLYCQ-QYAEVKYTQGGLENLELS 211
++ W + AEL++ + +A FC++E + H+ LY + + AEVK NLE +
Sbjct: 711 EQIWLQAAELFMEQQHLKEAGFCIQEAAGLFPTSHSVLYMRGRLAEVK------GNLEEA 764
Query: 212 RKYFAQALKLNNRNMRALFGLYMSASHIASNPKASAKTKKDNMKYASWAASQINRAYQFA 271
++ + +AL +N +R + L + S + A K +D ++ S + A+Q
Sbjct: 765 KQLYKEALTVNPDGVRIMHSLGLMLSRLGHKSLAQ-KVLRDAVE----RQSTCHEAWQGL 819
Query: 272 GRSKKETKYSLKAVEDMLETLQITQS 297
G + + AV+ L L++ S
Sbjct: 820 GEVLQAQGQNEAAVDCFLTALELEAS 845
>gi|33457330 tetratricopeptide repeat domain 14 isoform a [Homo
sapiens]
Length = 770
Score = 40.0 bits (92), Expect = 0.002
Identities = 52/251 (20%), Positives = 102/251 (40%), Gaps = 25/251 (9%)
Query: 65 DYGRDDLALFCLQELRRQFPGSHRVKRLT-GMRFEAMERYDDAIQLYDRILQEDPTNTAA 123
++ DD A LR++ S +K + G+ + + R+ DA+ Y++ L+ D N A
Sbjct: 288 NFSEDDFA----SALRKKQSASWALKCVKIGVDYFKVGRHVDAMNEYNKALEIDKQNVEA 343
Query: 124 RKRKIAIRKAQGKNVEAI-------------RELNEYLEQFVGDQEAWHELAELYINEHD 170
+ A+ +G +AI R +YL Q + ++ E E ++N
Sbjct: 344 LVARGALYATKGSLNKAIEDFELALENCPTHRNARKYLCQTLVERGGQLEEEEKFLNAES 403
Query: 171 YAKAAFCLEELMMTNPHN----HLYCQQYAEVKYTQGGLENLELSRKYFAQALKLNNRNM 226
Y K A L+E H Y Q+ E++ Q E + ++K A KL
Sbjct: 404 YYKKALALDETFKDAEDALQKLHKYMQKSLELREKQAEKEEKQKTKKIETSAEKLRKLLK 463
Query: 227 RALFGLYMSASHIASNPKASAKTKKDNMKYASWAASQINRAYQFAGRSKKETKYSLKAVE 286
+ S +S + +++ +S ++S ++ ++ R++ E+ S +
Sbjct: 464 EE---KRLKKKRRKSTSSSSVSSADESVSSSSSSSSSGHKRHKKHKRNRSESSRSSRRHS 520
Query: 287 DMLETLQITQS 297
+ QI Q+
Sbjct: 521 SRASSNQIDQN 531
>gi|5453980 DnaJ (Hsp40) homolog, subfamily C, member 3 [Homo
sapiens]
Length = 504
Score = 39.7 bits (91), Expect = 0.003
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 19/160 (11%)
Query: 45 ASKLGDDIWIIYEQVMIAALDYGRDDLALF----CL---QELRRQFPGSHRVKRLTGMRF 97
ASKL +D + ++ G +L+L CL Q+ +R F +VK+L +
Sbjct: 214 ASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIE 273
Query: 98 EAME-----RYDDAIQLYDRILQEDPT----NTAARKRKIAIRKAQGKNVEAIRELNEYL 148
A E RY DA Y+ +++ +P+ +++R K VEAIR +E L
Sbjct: 274 SAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVL 333
Query: 149 EQFVGDQEAWHELAELYINEHDYAKAAFCLEELMMTNPHN 188
+ + A + AE Y+ E Y +A +++ HN
Sbjct: 334 QMEPDNVNALKDRAEAYLIEEMYDEA---IQDYETAQEHN 370
Score = 29.3 bits (64), Expect = 4.4
Identities = 26/126 (20%), Positives = 54/126 (42%), Gaps = 7/126 (5%)
Query: 94 GMRFEAMERYDDAIQLYDRILQEDPTNTAARKRKIAIRKAQGKNVEAIRELNEYLEQFVG 153
G + A + DA+ + + DP N A R+ + A GK+ A+ +L + ++ +
Sbjct: 44 GKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMD 103
Query: 154 DQEAWHELAELYINEHDYAKAAFCLEELMMTNPHNHLYCQQYAEVKYTQGGLENLELSRK 213
A + L + + +A ++++ +NP + E K Q L + ++
Sbjct: 104 FTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEN-------EEKEAQSQLIKSDEMQR 156
Query: 214 YFAQAL 219
+QAL
Sbjct: 157 LRSQAL 162
>gi|83415184 transmembrane and tetratricopeptide repeat containing 1
[Homo sapiens]
Length = 774
Score = 38.5 bits (88), Expect = 0.007
Identities = 46/219 (21%), Positives = 88/219 (40%), Gaps = 20/219 (9%)
Query: 80 RRQFPGSHRVKRLT--GMRFEAMERYDDAIQLYDRILQEDPTNTAARKRKIAIRKAQGKN 137
+R +H+ + L+ G + RY++A+Q+Y P+ R + G+
Sbjct: 566 KRALQVAHKAEILSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQT 625
Query: 138 VEAIRELNEYLEQFVGDQEAWHELAELYINEHDYAKAAFCLEELMMTNPHNHLYCQQYAE 197
EA + N + + G E + L+ +Y + ++ KA +++ + P + +
Sbjct: 626 KEAEKMTNHIVSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVISELFF 685
Query: 198 VKYTQGGLEN-LELSRKYFAQALKLNNRNMRALFGLYMSASHIASNPKASAKTKKDNMKY 256
K Q +N L+ + + + A++LN +A + HI KY
Sbjct: 686 TKGNQLREQNLLDKAFESYRVAVQLNPDQAQAWMNM-GGIQHIKG-------------KY 731
Query: 257 ASWAASQINRAYQFAGRSK--KETKYSLKAVEDMLETLQ 293
S A + RA Q SK KE L +E L+ ++
Sbjct: 732 VS-ARAYYERALQLVPDSKLLKENLAKLDRLEKRLQEVR 769
Score = 28.9 bits (63), Expect = 5.7
Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 15/153 (9%)
Query: 105 DAIQLYDRILQEDPTNTAARKRKIAIRKAQGKNVEAIRELNEYLEQFVGDQEAWHELAEL 164
+A Y R LQ P + A + K+Q K EAI L + ++ +A+ LA L
Sbjct: 424 EAKMYYQRALQLHPQHNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASL 483
Query: 165 YINEHDYAKAAFCLEELMMTNPHNHLYCQQYAEVKYTQG------GLENLELSRKYFAQA 218
+ + +A EE+ T N C +++ G GL E + ++ QA
Sbjct: 484 LAEQERFKEA----EEIYQTGIKN---CPDSSDLHNNYGVFLVDTGLP--EKAVAHYQQA 534
Query: 219 LKLNNRNMRALFGLYMSASHIASNPKASAKTKK 251
+KL+ + A+ L + N A K+
Sbjct: 535 IKLSPSHHVAMVNLGRLYRSLGENSMAEEWYKR 567
>gi|14589866 aspartate beta-hydroxylase isoform a [Homo sapiens]
Length = 758
Score = 37.4 bits (85), Expect = 0.016
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 21/111 (18%)
Query: 72 ALFCLQELRRQFPGSHRVKRLTGMRFEAMERYDDAIQLYDRILQEDPTNTAARKRKIAIR 131
+L LQ L + FP +K G+ + + D+A ++Y+ +L P + A+ I
Sbjct: 439 SLLTLQRLVQLFPNDTSLKNDLGVGYLLIGDNDNAKKVYEEVLSVTPNDGFAKVHYGFIL 498
Query: 132 KAQGKNVEAIRELNEYLE-------------------QFVGDQEA--WHEL 161
KAQ K E+I L E +E Q VG++EA W+EL
Sbjct: 499 KAQNKIAESIPYLKEGIESGDPGTDDGRFYFHLGDAMQRVGNKEAYKWYEL 549
>gi|126273559 plasma carboxypeptidase B2 isoform b [Homo sapiens]
Length = 360
Score = 34.7 bits (78), Expect = 0.10
Identities = 32/139 (23%), Positives = 57/139 (41%), Gaps = 23/139 (16%)
Query: 151 FVGDQEAWHELAELYINEH--------DYAKAAFCLEELMMTNPHNHLYCQQYAEVKYTQ 202
F+G W + Y N H ++A +C EE ++ + YC Y E
Sbjct: 194 FIGHNRMWRKNRSFYANNHCIGTDLNRNFASKHWC-EEGASSSSCSETYCGLYPE----- 247
Query: 203 GGLENLELSRKYFAQALKLNNRNMRALFGLYMSASHIASNPKASAKTKKDNMKYASWAAS 262
E K A L+ N ++A ++ + HI P + ++K + + S AS
Sbjct: 248 -----SEPEVKAVASFLRRNINQIKAYISMHSYSQHIVF-PYSYTRSKSKDHEELSLVAS 301
Query: 263 QINRAYQFAGRSKKETKYS 281
+ RA + ++ K T+Y+
Sbjct: 302 EAVRAIE---KTSKNTRYT 317
>gi|169204626 PREDICTED: hypothetical protein [Homo sapiens]
Length = 501
Score = 33.5 bits (75), Expect = 0.23
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 20 RKWREENSRNSEQIVEVGEELINEYASKLGDDIWIIYEQVMIAALDYGRDDLALFCLQEL 79
RK EEN++ ++ E + E S+L +D + QV A R +L L+EL
Sbjct: 369 RKLEEENNK-----FKLALETLEETNSQLSEDCTELRLQVKSAHQAIMRTNLLKEELEEL 423
Query: 80 RRQFPGSHRVKRLTGMRFEAMERYDDAIQLYDRILQEDPTNTAAR 124
+ S K + + + +E + A+ L RILQE+ ++T R
Sbjct: 424 KLSMNASEEQKSMIVAQSKQLETENRALILKIRILQEEMSDTYQR 468
>gi|239750266 PREDICTED: hypothetical protein [Homo sapiens]
Length = 501
Score = 33.5 bits (75), Expect = 0.23
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 20 RKWREENSRNSEQIVEVGEELINEYASKLGDDIWIIYEQVMIAALDYGRDDLALFCLQEL 79
RK EEN++ ++ E + E S+L +D + QV A R +L L+EL
Sbjct: 369 RKLEEENNK-----FKLALETLEETNSQLSEDCTELRLQVKSAHQAIMRTNLLKEELEEL 423
Query: 80 RRQFPGSHRVKRLTGMRFEAMERYDDAIQLYDRILQEDPTNTAAR 124
+ S K + + + +E + A+ L RILQE+ ++T R
Sbjct: 424 KLSMNASEEQKSMIVAQSKQLETENRALILKIRILQEEMSDTYQR 468
>gi|239744574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 501
Score = 33.5 bits (75), Expect = 0.23
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 20 RKWREENSRNSEQIVEVGEELINEYASKLGDDIWIIYEQVMIAALDYGRDDLALFCLQEL 79
RK EEN++ ++ E + E S+L +D + QV A R +L L+EL
Sbjct: 369 RKLEEENNK-----FKLALETLEETNSQLSEDCTELRLQVKSAHQAIMRTNLLKEELEEL 423
Query: 80 RRQFPGSHRVKRLTGMRFEAMERYDDAIQLYDRILQEDPTNTAAR 124
+ S K + + + +E + A+ L RILQE+ ++T R
Sbjct: 424 KLSMNASEEQKSMIVAQSKQLETENRALILKIRILQEEMSDTYQR 468
>gi|154813191 IQ motif containing E isoform 1 [Homo sapiens]
Length = 695
Score = 33.5 bits (75), Expect = 0.23
Identities = 33/154 (21%), Positives = 59/154 (38%), Gaps = 15/154 (9%)
Query: 15 MRDKMRKWREENSRNSEQIVEV-----GEELINEYASKLGDDIWII---YEQVMIAALDY 66
MR K+R+ EENSR QI ++ G + + A K D W+I ++++
Sbjct: 167 MRTKLRRLEEENSRKDRQIEQLLDPSRGTDFVRTLAEKRPDASWVINGLKQRILKLEQQC 226
Query: 67 GRDDLALFCLQELRRQFPGSHRVKRLTGMRFEAMERYDDAIQLYDRILQEDPTNTAARKR 126
D + LQ + L MR Y++ +L + + T
Sbjct: 227 KEKDGTISKLQT-------DMKTTNLEEMRIAMETYYEEVHRLQTLLASSETTGKKPLGE 279
Query: 127 KIAIRKAQGKNVEAIRELNEYLEQFVGDQEAWHE 160
K K Q K A+ L+ +++ + ++ E
Sbjct: 280 KKTGAKRQKKMGSALLSLSRSVQELTEENQSLKE 313
>gi|27262638 sperm associated antigen 1 [Homo sapiens]
Length = 926
Score = 33.5 bits (75), Expect = 0.23
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 103 YDDAIQLYDRILQEDPTNTAARKRKIAIRKAQGKNVEAIRELNEYLEQFVGDQEAWHELA 162
Y++A+ Y R + PT A R A K Q N A ++ + LE G+ +A A
Sbjct: 225 YEEAVMYYTRSISALPTVVAYNNRAQAEIKLQNWN-SAFQDCEKVLELEPGNVKALLRRA 283
Query: 163 ELYINEHDYAKAAFCLEELMMTNPHNHLYCQQYAEVK 199
Y +++ +A L +++ P N L + +EV+
Sbjct: 284 TTYKHQNKLREATEDLSKVLDVEPDNDLAKKTLSEVE 320
Score = 29.6 bits (65), Expect = 3.3
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 40 LINEYASKLGDDIWIIYEQVMIAALDYGRDDLALFCLQELRRQF---PGSHRVKRLTGMR 96
L+ S++ DD+ I+Y A Y ++ C+Q+ R P S + M
Sbjct: 474 LLEPAGSEIADDLSILYSN---RAACYLKEGNCSGCIQDCNRALELHPFSMKPLLRRAMA 530
Query: 97 FEAMERYDDAIQLYDRILQED 117
+E +E+Y A Y +LQ D
Sbjct: 531 YETLEQYGKAYVDYKTVLQID 551
>gi|27262636 sperm associated antigen 1 [Homo sapiens]
Length = 926
Score = 33.5 bits (75), Expect = 0.23
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 103 YDDAIQLYDRILQEDPTNTAARKRKIAIRKAQGKNVEAIRELNEYLEQFVGDQEAWHELA 162
Y++A+ Y R + PT A R A K Q N A ++ + LE G+ +A A
Sbjct: 225 YEEAVMYYTRSISALPTVVAYNNRAQAEIKLQNWN-SAFQDCEKVLELEPGNVKALLRRA 283
Query: 163 ELYINEHDYAKAAFCLEELMMTNPHNHLYCQQYAEVK 199
Y +++ +A L +++ P N L + +EV+
Sbjct: 284 TTYKHQNKLREATEDLSKVLDVEPDNDLAKKTLSEVE 320
Score = 29.6 bits (65), Expect = 3.3
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 40 LINEYASKLGDDIWIIYEQVMIAALDYGRDDLALFCLQELRRQF---PGSHRVKRLTGMR 96
L+ S++ DD+ I+Y A Y ++ C+Q+ R P S + M
Sbjct: 474 LLEPAGSEIADDLSILYSN---RAACYLKEGNCSGCIQDCNRALELHPFSMKPLLRRAMA 530
Query: 97 FEAMERYDDAIQLYDRILQED 117
+E +E+Y A Y +LQ D
Sbjct: 531 YETLEQYGKAYVDYKTVLQID 551
>gi|154813193 IQ motif containing E isoform 2 [Homo sapiens]
Length = 679
Score = 33.5 bits (75), Expect = 0.23
Identities = 33/154 (21%), Positives = 59/154 (38%), Gaps = 15/154 (9%)
Query: 15 MRDKMRKWREENSRNSEQIVEV-----GEELINEYASKLGDDIWII---YEQVMIAALDY 66
MR K+R+ EENSR QI ++ G + + A K D W+I ++++
Sbjct: 151 MRTKLRRLEEENSRKDRQIEQLLDPSRGTDFVRTLAEKRPDASWVINGLKQRILKLEQQC 210
Query: 67 GRDDLALFCLQELRRQFPGSHRVKRLTGMRFEAMERYDDAIQLYDRILQEDPTNTAARKR 126
D + LQ + L MR Y++ +L + + T
Sbjct: 211 KEKDGTISKLQT-------DMKTTNLEEMRIAMETYYEEVHRLQTLLASSETTGKKPLGE 263
Query: 127 KIAIRKAQGKNVEAIRELNEYLEQFVGDQEAWHE 160
K K Q K A+ L+ +++ + ++ E
Sbjct: 264 KKTGAKRQKKMGSALLSLSRSVQELTEENQSLKE 297
>gi|7661950 SH2 domain binding protein 1 [Homo sapiens]
Length = 1173
Score = 33.1 bits (74), Expect = 0.30
Identities = 21/86 (24%), Positives = 39/86 (45%)
Query: 97 FEAMERYDDAIQLYDRILQEDPTNTAARKRKIAIRKAQGKNVEAIRELNEYLEQFVGDQE 156
+EAM + +A +LY IL+E P R A+ + +G EA E L+ +
Sbjct: 507 YEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPD 566
Query: 157 AWHELAELYINEHDYAKAAFCLEELM 182
AW + L++ + ++ E ++
Sbjct: 567 AWSLIGNLHLAKQEWGPGQKKFERIL 592
Score = 31.2 bits (69), Expect = 1.1
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 104 DDAIQLYDRILQEDPTNTAARK---RKIAIRKAQGKNVEAIRELNEYLEQFVGDQEAWHE 160
++A Q ++++L+ P N K A + Q K A L + EQ+ D EAW E
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417
Query: 161 LAEL 164
LA++
Sbjct: 418 LAQI 421
Score = 30.4 bits (67), Expect = 2.0
Identities = 19/79 (24%), Positives = 32/79 (40%)
Query: 104 DDAIQLYDRILQEDPTNTAARKRKIAIRKAQGKNVEAIRELNEYLEQFVGDQEAWHELAE 163
D A+ +Y ++L+ D N A A+ +G EA + E + W LA
Sbjct: 630 DRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATADISDVWLNLAH 689
Query: 164 LYINEHDYAKAAFCLEELM 182
+Y+ + Y A E +
Sbjct: 690 IYVEQKQYISAVQMYENCL 708
>gi|30581135 structural maintenance of chromosomes 1A [Homo sapiens]
Length = 1233
Score = 32.7 bits (73), Expect = 0.39
Identities = 63/295 (21%), Positives = 112/295 (37%), Gaps = 56/295 (18%)
Query: 13 EEMRDKMRKWREENSRNSEQIVEVGEELINEYASKLGDDIWIIYEQVMIAALDYGRDDLA 72
EE + + EE +I E+ +EL N+ +LGD I + R
Sbjct: 450 EEQKKLEGELTEEVEMAKRRIDEINKEL-NQVMEQLGD--------ARIDRQESSRQQRK 500
Query: 73 LFCLQELRRQFPGSHRVKRLTGMRFEAMERYDDAIQLYDRILQEDPTNTAARKRKIAIRK 132
++ ++R +PGS +Y R++ D +K +IA+ K
Sbjct: 501 AEIMESIKRLYPGS----------------------VYGRLI--DLCQPTQKKYQIAVTK 536
Query: 133 AQGKNVEAI--------RELNEYLEQFVGDQEAWHELAELYINEHD----YAKAAFCLEE 180
GKN++AI R+ +Y+++ G+ E + L L + D K A + +
Sbjct: 537 VLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVID 596
Query: 181 LMMTNPHNHLYCQQYAEVKYTQGGLENLELSRKYFAQALKLNNRNMR-ALFGLYMSASHI 239
++ P + QYA +N+E +R+ A + R+ AL G S +
Sbjct: 597 VIRYEPPHIKKALQYACGNALV--CDNVEDARRI---AFGGHQRHKTVALDGTLFQKSGV 651
Query: 240 ASNPKASAKTKKDNMKYASWAASQINRAYQFAGRSKKETKYSLKAVEDMLETLQI 294
S + K K W +++ + R +E K +KA E Q+
Sbjct: 652 ISGGASDLKAKA-----RRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQV 701
>gi|110611917 tetratricopeptide repeat domain 14 isoform b [Homo
sapiens]
Length = 439
Score = 32.7 bits (73), Expect = 0.39
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 18/130 (13%)
Query: 65 DYGRDDLALFCLQELRRQFPGSHRVKRLT-GMRFEAMERYDDAIQLYDRILQEDPTNTAA 123
++ DD A LR++ S +K + G+ + + R+ DA+ Y++ L+ D N A
Sbjct: 288 NFSEDDFA----SALRKKQSASWALKCVKIGVDYFKVGRHVDAMNEYNKALEIDKQNVEA 343
Query: 124 RKRKIAIRKAQGKNVEAI-------------RELNEYLEQFVGDQEAWHELAELYINEHD 170
+ A+ +G +AI R +YL Q + ++ E E ++N
Sbjct: 344 LVARGALYATKGSLNKAIEDFELALENCPTHRNARKYLCQTLVERGGQLEEEEKFLNAES 403
Query: 171 YAKAAFCLEE 180
Y K A L+E
Sbjct: 404 YYKKALALDE 413
>gi|32307150 O-linked GlcNAc transferase isoform 2 [Homo sapiens]
Length = 1036
Score = 32.0 bits (71), Expect = 0.67
Identities = 38/174 (21%), Positives = 77/174 (44%), Gaps = 21/174 (12%)
Query: 54 IIYEQVMI-AALDYGRDDLALFCLQELRRQFPGSH----RVKRLTGMRFEAMERYDDAIQ 108
+ YEQ +I A+D R + EL+ FP ++ + G EA + Y+ A++
Sbjct: 258 VYYEQGLIDLAIDTYRRAI------ELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALR 311
Query: 109 LYDRILQEDPTNTAARKRKIAIRKAQGKNVEAIRELNEYLEQFVGDQEAWHELAELYINE 168
L PT+ + I++ QG EA+R + LE F A LA + +
Sbjct: 312 LC-------PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQ 364
Query: 169 HDYAKAAFCLEELMMTNPHNHLYCQQYAEVKYTQGGLENLELSRKYFAQALKLN 222
+A +E + +P + Y+ + T +++++ + + + +A+++N
Sbjct: 365 GKLQEALMHYKEAIRISP---TFADAYSNMGNTLKEMQDVQGALQCYTRAIQIN 415
Score = 30.8 bits (68), Expect = 1.5
Identities = 19/83 (22%), Positives = 34/83 (40%)
Query: 104 DDAIQLYDRILQEDPTNTAARKRKIAIRKAQGKNVEAIRELNEYLEQFVGDQEAWHELAE 163
++A++LY + L+ P AA ++ + QGK EA+ E + +A+ +
Sbjct: 334 EEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGN 393
Query: 164 LYINEHDYAKAAFCLEELMMTNP 186
D A C + NP
Sbjct: 394 TLKEMQDVQGALQCYTRAIQINP 416
>gi|32307148 O-linked GlcNAc transferase isoform 1 [Homo sapiens]
Length = 1046
Score = 32.0 bits (71), Expect = 0.67
Identities = 38/174 (21%), Positives = 77/174 (44%), Gaps = 21/174 (12%)
Query: 54 IIYEQVMI-AALDYGRDDLALFCLQELRRQFPGSH----RVKRLTGMRFEAMERYDDAIQ 108
+ YEQ +I A+D R + EL+ FP ++ + G EA + Y+ A++
Sbjct: 268 VYYEQGLIDLAIDTYRRAI------ELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALR 321
Query: 109 LYDRILQEDPTNTAARKRKIAIRKAQGKNVEAIRELNEYLEQFVGDQEAWHELAELYINE 168
L PT+ + I++ QG EA+R + LE F A LA + +
Sbjct: 322 LC-------PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQ 374
Query: 169 HDYAKAAFCLEELMMTNPHNHLYCQQYAEVKYTQGGLENLELSRKYFAQALKLN 222
+A +E + +P + Y+ + T +++++ + + + +A+++N
Sbjct: 375 GKLQEALMHYKEAIRISP---TFADAYSNMGNTLKEMQDVQGALQCYTRAIQIN 425
Score = 30.8 bits (68), Expect = 1.5
Identities = 19/83 (22%), Positives = 34/83 (40%)
Query: 104 DDAIQLYDRILQEDPTNTAARKRKIAIRKAQGKNVEAIRELNEYLEQFVGDQEAWHELAE 163
++A++LY + L+ P AA ++ + QGK EA+ E + +A+ +
Sbjct: 344 EEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGN 403
Query: 164 LYINEHDYAKAAFCLEELMMTNP 186
D A C + NP
Sbjct: 404 TLKEMQDVQGALQCYTRAIQINP 426
>gi|221219056 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform 2
[Homo sapiens]
Length = 438
Score = 32.0 bits (71), Expect = 0.67
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 55 IYEQVMIAALDYGRDDL--ALFCLQELRRQFPGSHRVKRLTGMRFEAMERYDDAIQLYDR 112
+ E IA D+ + D +FC+ P HR K L + RY +A +
Sbjct: 86 VMEYEKIAETDFEKRDFRKVVFCMDRALEFAPACHRFKILKAECLAMLGRYPEAQSVASD 145
Query: 113 ILQEDPTNTAA 123
IL+ D TN A
Sbjct: 146 ILRMDSTNADA 156
>gi|221219053 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform 1
[Homo sapiens]
Length = 494
Score = 32.0 bits (71), Expect = 0.67
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 55 IYEQVMIAALDYGRDDL--ALFCLQELRRQFPGSHRVKRLTGMRFEAMERYDDAIQLYDR 112
+ E IA D+ + D +FC+ P HR K L + RY +A +
Sbjct: 142 VMEYEKIAETDFEKRDFRKVVFCMDRALEFAPACHRFKILKAECLAMLGRYPEAQSVASD 201
Query: 113 ILQEDPTNTAA 123
IL+ D TN A
Sbjct: 202 ILRMDSTNADA 212
>gi|22095349 WD and tetratricopeptide repeats 1 [Homo sapiens]
Length = 676
Score = 31.6 bits (70), Expect = 0.88
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Query: 84 PGSHRVKRLTGMRFEAMERYDDAIQLYDRILQEDPTNTAARKRKIAI---RKAQGKNVEA 140
P RVK+ F A +++ AIQLY + +Q P N + A RK G + +A
Sbjct: 359 PYLERVKQQANEAF-ACQQWTQAIQLYSKAVQRAPHNAMLYGNRAAAYMKRKWDGDHYDA 417
Query: 141 IRELNEYLEQFVGDQEAWHELAELYINEHDYAKAAFCLEE 180
+R+ + + +A LA A+A CL++
Sbjct: 418 LRDCLKAISLNPCHLKAHFRLARCLFELKYVAEALECLDD 457
>gi|31542980 interferon-induced protein with tetratricopeptide
repeats 3 [Homo sapiens]
Length = 490
Score = 31.6 bits (70), Expect = 0.88
Identities = 30/134 (22%), Positives = 57/134 (42%), Gaps = 14/134 (10%)
Query: 130 IRKAQGKN---VEAIRELNEYLEQFVGDQE------AWHELAELYINEHDYAKAAFCLEE 180
I+ G N +E +R+ E ++Q DQ W A +Y + + A +++
Sbjct: 60 IKHLDGNNEAALECLRQAEELIQQEHADQAEIRSLVTWGNYAWVYYHLGRLSDAQIYVDK 119
Query: 181 LMMT-----NPHNHLYCQQYAEVKYTQGGLENLELSRKYFAQALKLNNRNMRALFGLYMS 235
+ T NP++ Y + E +TQ E ++ F +AL+ N GL ++
Sbjct: 120 VKQTCKKFSNPYSIEYSELDCEEGWTQLKCGRNERAKVCFEKALEEKPNNPEFSSGLAIA 179
Query: 236 ASHIASNPKASAKT 249
H+ ++P+ T
Sbjct: 180 MYHLDNHPEKQFST 193
Score = 30.4 bits (67), Expect = 2.0
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 28/164 (17%)
Query: 76 LQELRRQFPGSHRVKRLTGMRFEAMERYDDAIQLYDRILQEDPTNTAARKR-----KIAI 130
++E + P V R + D AI+L+ R+L+ P N + K +
Sbjct: 230 VEEALEKSPCQTDVLRSAAKFYRRKGDLDKAIELFQRVLESTPNNGYLYHQIGCCYKAKV 289
Query: 131 RKAQGK-------NVEAIRELNEY--------LEQFVGDQEAWHELAELYINEHDYAKAA 175
R+ Q N E I L +Y LE+ + A+ +LAE E + +
Sbjct: 290 RQMQNTGESEASGNKEMIEALKQYAMDYSNKALEKGLNPLNAYSDLAEFL--ETECYQTP 347
Query: 176 FCLEELMMTNPHNH-LYC--QQY---AEVKYTQGGLENLELSRK 213
F E +H YC Q+Y +E Q GLE L +S+K
Sbjct: 348 FNKEVPDAEKQQSHQRYCNLQKYNGKSEDTAVQHGLEGLSISKK 391
>gi|72534658 interferon-induced protein with tetratricopeptide
repeats 3 [Homo sapiens]
Length = 490
Score = 31.6 bits (70), Expect = 0.88
Identities = 30/134 (22%), Positives = 57/134 (42%), Gaps = 14/134 (10%)
Query: 130 IRKAQGKN---VEAIRELNEYLEQFVGDQE------AWHELAELYINEHDYAKAAFCLEE 180
I+ G N +E +R+ E ++Q DQ W A +Y + + A +++
Sbjct: 60 IKHLDGNNEAALECLRQAEELIQQEHADQAEIRSLVTWGNYAWVYYHLGRLSDAQIYVDK 119
Query: 181 LMMT-----NPHNHLYCQQYAEVKYTQGGLENLELSRKYFAQALKLNNRNMRALFGLYMS 235
+ T NP++ Y + E +TQ E ++ F +AL+ N GL ++
Sbjct: 120 VKQTCKKFSNPYSIEYSELDCEEGWTQLKCGRNERAKVCFEKALEEKPNNPEFSSGLAIA 179
Query: 236 ASHIASNPKASAKT 249
H+ ++P+ T
Sbjct: 180 MYHLDNHPEKQFST 193
Score = 30.4 bits (67), Expect = 2.0
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 28/164 (17%)
Query: 76 LQELRRQFPGSHRVKRLTGMRFEAMERYDDAIQLYDRILQEDPTNTAARKR-----KIAI 130
++E + P V R + D AI+L+ R+L+ P N + K +
Sbjct: 230 VEEALEKSPCQTDVLRSAAKFYRRKGDLDKAIELFQRVLESTPNNGYLYHQIGCCYKAKV 289
Query: 131 RKAQGK-------NVEAIRELNEY--------LEQFVGDQEAWHELAELYINEHDYAKAA 175
R+ Q N E I L +Y LE+ + A+ +LAE E + +
Sbjct: 290 RQMQNTGESEASGNKEMIEALKQYAMDYSNKALEKGLNPLNAYSDLAEFL--ETECYQTP 347
Query: 176 FCLEELMMTNPHNH-LYC--QQY---AEVKYTQGGLENLELSRK 213
F E +H YC Q+Y +E Q GLE L +S+K
Sbjct: 348 FNKEVPDAEKQQSHQRYCNLQKYNGKSEDTAVQHGLEGLSISKK 391
>gi|58761544 amine oxidase (flavin containing) domain 2 isoform a
[Homo sapiens]
Length = 876
Score = 31.6 bits (70), Expect = 0.88
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 136 KNVEAIRELNEYLEQFVGDQEAWHELAELYINEHDYAKAAFCLEELMMTNPHNHL--YCQ 193
K V+ EL E L + V +E EL + Y + E ++ + H L C+
Sbjct: 457 KIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCK 516
Query: 194 QYAEVKYTQGGLE 206
+Y E+ TQG LE
Sbjct: 517 EYDELAETQGKLE 529
>gi|58761546 amine oxidase (flavin containing) domain 2 isoform b
[Homo sapiens]
Length = 852
Score = 31.6 bits (70), Expect = 0.88
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 136 KNVEAIRELNEYLEQFVGDQEAWHELAELYINEHDYAKAAFCLEELMMTNPHNHL--YCQ 193
K V+ EL E L + V +E EL + Y + E ++ + H L C+
Sbjct: 433 KIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCK 492
Query: 194 QYAEVKYTQGGLE 206
+Y E+ TQG LE
Sbjct: 493 EYDELAETQGKLE 505
>gi|239756104 PREDICTED: tetratricopeptide repeat domain 6 [Homo
sapiens]
Length = 1614
Score = 31.2 bits (69), Expect = 1.1
Identities = 39/218 (17%), Positives = 82/218 (37%), Gaps = 27/218 (12%)
Query: 64 LDYGRDDLALFCLQELRRQF---PGSHRVKRLTGMRFEAMERYDDAIQLYDRILQEDPTN 120
++YG D+ ++ + P + + G +A ++ A + + DP N
Sbjct: 1349 MEYGHDEATKQAQKDFLKALHINPAYIKARISFGYNLQAQGKFQKAWNHFTIAIDTDPKN 1408
Query: 121 TAARKRKIAIRKAQGKNVEAIRELNEYLE-----QFVGDQEAWHELAELYINE-HDYAKA 174
A + + + G N A++++N ++ +F+ ++ HE N DY
Sbjct: 1409 YLAYEGRAVVCLQMGNNFAAMQDINAAMKISTTAEFLTNRGVIHEFMGHKQNAMKDY--- 1465
Query: 175 AFCLEELMMTNPHNHLYCQQYAEVKYTQGGL----ENLELSRKYFAQALKLNNRNMRALF 230
++ + NP +Y+ + G + + YF++ALK + N L
Sbjct: 1466 ----QDAITLNP-------KYSLAYFNAGNIYFHHRQFSQASDYFSKALKFDPENEYVLM 1514
Query: 231 GLYMSASHIASNPKASAKTKKDNMKYASWAASQINRAY 268
++ + + +A WAA NRA+
Sbjct: 1515 NRAITNTILKKYEEAKEDFANVIESCPFWAAVYFNRAH 1552
>gi|239750633 PREDICTED: tetratricopeptide repeat domain 6 [Homo
sapiens]
Length = 1614
Score = 31.2 bits (69), Expect = 1.1
Identities = 39/218 (17%), Positives = 82/218 (37%), Gaps = 27/218 (12%)
Query: 64 LDYGRDDLALFCLQELRRQF---PGSHRVKRLTGMRFEAMERYDDAIQLYDRILQEDPTN 120
++YG D+ ++ + P + + G +A ++ A + + DP N
Sbjct: 1349 MEYGHDEATKQAQKDFLKALHINPAYIKARISFGYNLQAQGKFQKAWNHFTIAIDTDPKN 1408
Query: 121 TAARKRKIAIRKAQGKNVEAIRELNEYLE-----QFVGDQEAWHELAELYINE-HDYAKA 174
A + + + G N A++++N ++ +F+ ++ HE N DY
Sbjct: 1409 YLAYEGRAVVCLQMGNNFAAMQDINAAMKISTTAEFLTNRGVIHEFMGHKQNAMKDY--- 1465
Query: 175 AFCLEELMMTNPHNHLYCQQYAEVKYTQGGL----ENLELSRKYFAQALKLNNRNMRALF 230
++ + NP +Y+ + G + + YF++ALK + N L
Sbjct: 1466 ----QDAITLNP-------KYSLAYFNAGNIYFHHRQFSQASDYFSKALKFDPENEYVLM 1514
Query: 231 GLYMSASHIASNPKASAKTKKDNMKYASWAASQINRAY 268
++ + + +A WAA NRA+
Sbjct: 1515 NRAITNTILKKYEEAKEDFANVIESCPFWAAVYFNRAH 1552
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.130 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,680,073
Number of Sequences: 37866
Number of extensions: 372167
Number of successful extensions: 1486
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 1405
Number of HSP's gapped (non-prelim): 112
length of query: 297
length of database: 18,247,518
effective HSP length: 102
effective length of query: 195
effective length of database: 14,385,186
effective search space: 2805111270
effective search space used: 2805111270
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.