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Search of human proteins with 7661870
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7661870 homocysteine-inducible, endoplasmic reticulum
stress-inducible, ubiquitin-like domain member 1 isoform 1 [Homo
sapiens]
(391 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7661870 homocysteine-inducible, endoplasmic reticulum stress-... 814 0.0
gi|58530857 homocysteine-inducible, endoplasmic reticulum stress... 807 0.0
gi|58530859 homocysteine-inducible, endoplasmic reticulum stress... 749 0.0
gi|188497632 HERPUD family member 2 [Homo sapiens] 270 2e-72
gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens] 37 0.023
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 37 0.040
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 37 0.040
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 37 0.040
gi|7661990 mastermind-like 1 [Homo sapiens] 37 0.040
gi|209915561 dynamin 3 isoform b [Homo sapiens] 34 0.20
gi|7662274 epidermal Langerhans cell protein LCP1 [Homo sapiens] 34 0.20
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens] 34 0.26
gi|5032033 RNA binding motif protein 6 [Homo sapiens] 33 0.34
gi|122056683 FRAS1 related extracellular matrix 1 [Homo sapiens] 33 0.34
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 33 0.34
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 33 0.34
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 33 0.34
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 33 0.44
gi|149944548 neurobeachin-like 2 [Homo sapiens] 33 0.44
gi|169173314 PREDICTED: hypothetical protein LOC286177 [Homo sap... 33 0.58
gi|42544243 dynamin 3 isoform a [Homo sapiens] 33 0.58
gi|8659574 transcription factor E3 [Homo sapiens] 32 0.98
gi|38787935 BMP-2 inducible kinase isoform a [Homo sapiens] 32 0.98
gi|38787904 BMP-2 inducible kinase isoform b [Homo sapiens] 32 0.98
gi|50428940 mediator complex subunit 25 [Homo sapiens] 32 0.98
gi|13376439 ubiquitin domain containing 1 [Homo sapiens] 32 0.98
gi|169205253 PREDICTED: hypothetical protein [Homo sapiens] 32 1.3
gi|154354972 phosphatase and actin regulator 2 isoform 4 [Homo s... 32 1.3
gi|154354974 phosphatase and actin regulator 2 isoform 3 [Homo s... 32 1.3
gi|154354970 phosphatase and actin regulator 2 isoform 2 [Homo s... 32 1.3
>gi|7661870 homocysteine-inducible, endoplasmic reticulum
stress-inducible, ubiquitin-like domain member 1 isoform
1 [Homo sapiens]
Length = 391
Score = 814 bits (2102), Expect = 0.0
Identities = 391/391 (100%), Positives = 391/391 (100%)
Query: 1 MESETEPEPVTLLVKSPNQRHRDLELSGDRGWSVGHLKAHLSRVYPERPRPEDQRLIYSG 60
MESETEPEPVTLLVKSPNQRHRDLELSGDRGWSVGHLKAHLSRVYPERPRPEDQRLIYSG
Sbjct: 1 MESETEPEPVTLLVKSPNQRHRDLELSGDRGWSVGHLKAHLSRVYPERPRPEDQRLIYSG 60
Query: 61 KLLLDHQCLRDLLPKQEKRHVLHLVCNVKSPSKMPEINAKVAESTEEPAGSNRGQYPEDS 120
KLLLDHQCLRDLLPKQEKRHVLHLVCNVKSPSKMPEINAKVAESTEEPAGSNRGQYPEDS
Sbjct: 61 KLLLDHQCLRDLLPKQEKRHVLHLVCNVKSPSKMPEINAKVAESTEEPAGSNRGQYPEDS 120
Query: 121 SSDGLRQREVLRNLSSPGWENISRPEAAQQAFQGLGPGFSGYTPYGWLQLSWFQQIYARQ 180
SSDGLRQREVLRNLSSPGWENISRPEAAQQAFQGLGPGFSGYTPYGWLQLSWFQQIYARQ
Sbjct: 121 SSDGLRQREVLRNLSSPGWENISRPEAAQQAFQGLGPGFSGYTPYGWLQLSWFQQIYARQ 180
Query: 181 YYMQYLAATAASGAFVPPPSAQEIPVVSAPAPAPIHNQFPAENQPANQNAAPQVVVNPGA 240
YYMQYLAATAASGAFVPPPSAQEIPVVSAPAPAPIHNQFPAENQPANQNAAPQVVVNPGA
Sbjct: 181 YYMQYLAATAASGAFVPPPSAQEIPVVSAPAPAPIHNQFPAENQPANQNAAPQVVVNPGA 240
Query: 241 NQNLRMNAQGGPIVEEDDEINRDWLDWTYSAATFSVFLSILYFYSSLSRFLMVMGATVVM 300
NQNLRMNAQGGPIVEEDDEINRDWLDWTYSAATFSVFLSILYFYSSLSRFLMVMGATVVM
Sbjct: 241 NQNLRMNAQGGPIVEEDDEINRDWLDWTYSAATFSVFLSILYFYSSLSRFLMVMGATVVM 300
Query: 301 YLHHVGWFPFRPRPVQNFPNDGPPPDVVNQDPNNNLQEGTDPETEDPNHLPPDRDVLDGE 360
YLHHVGWFPFRPRPVQNFPNDGPPPDVVNQDPNNNLQEGTDPETEDPNHLPPDRDVLDGE
Sbjct: 301 YLHHVGWFPFRPRPVQNFPNDGPPPDVVNQDPNNNLQEGTDPETEDPNHLPPDRDVLDGE 360
Query: 361 QTSPSFMSTAWLVFKTFFASLLPEGPPAIAN 391
QTSPSFMSTAWLVFKTFFASLLPEGPPAIAN
Sbjct: 361 QTSPSFMSTAWLVFKTFFASLLPEGPPAIAN 391
>gi|58530857 homocysteine-inducible, endoplasmic reticulum
stress-inducible, ubiquitin-like domain member 1 isoform
2 [Homo sapiens]
Length = 390
Score = 807 bits (2085), Expect = 0.0
Identities = 390/391 (99%), Positives = 390/391 (99%), Gaps = 1/391 (0%)
Query: 1 MESETEPEPVTLLVKSPNQRHRDLELSGDRGWSVGHLKAHLSRVYPERPRPEDQRLIYSG 60
MESETEPEPVTLLVKSPNQRHRDLELSGDRGWSVGHLKAHLSRVYPERPRPEDQRLIYSG
Sbjct: 1 MESETEPEPVTLLVKSPNQRHRDLELSGDRGWSVGHLKAHLSRVYPERPRPEDQRLIYSG 60
Query: 61 KLLLDHQCLRDLLPKQEKRHVLHLVCNVKSPSKMPEINAKVAESTEEPAGSNRGQYPEDS 120
KLLLDHQCLRDLLPK EKRHVLHLVCNVKSPSKMPEINAKVAESTEEPAGSNRGQYPEDS
Sbjct: 61 KLLLDHQCLRDLLPK-EKRHVLHLVCNVKSPSKMPEINAKVAESTEEPAGSNRGQYPEDS 119
Query: 121 SSDGLRQREVLRNLSSPGWENISRPEAAQQAFQGLGPGFSGYTPYGWLQLSWFQQIYARQ 180
SSDGLRQREVLRNLSSPGWENISRPEAAQQAFQGLGPGFSGYTPYGWLQLSWFQQIYARQ
Sbjct: 120 SSDGLRQREVLRNLSSPGWENISRPEAAQQAFQGLGPGFSGYTPYGWLQLSWFQQIYARQ 179
Query: 181 YYMQYLAATAASGAFVPPPSAQEIPVVSAPAPAPIHNQFPAENQPANQNAAPQVVVNPGA 240
YYMQYLAATAASGAFVPPPSAQEIPVVSAPAPAPIHNQFPAENQPANQNAAPQVVVNPGA
Sbjct: 180 YYMQYLAATAASGAFVPPPSAQEIPVVSAPAPAPIHNQFPAENQPANQNAAPQVVVNPGA 239
Query: 241 NQNLRMNAQGGPIVEEDDEINRDWLDWTYSAATFSVFLSILYFYSSLSRFLMVMGATVVM 300
NQNLRMNAQGGPIVEEDDEINRDWLDWTYSAATFSVFLSILYFYSSLSRFLMVMGATVVM
Sbjct: 240 NQNLRMNAQGGPIVEEDDEINRDWLDWTYSAATFSVFLSILYFYSSLSRFLMVMGATVVM 299
Query: 301 YLHHVGWFPFRPRPVQNFPNDGPPPDVVNQDPNNNLQEGTDPETEDPNHLPPDRDVLDGE 360
YLHHVGWFPFRPRPVQNFPNDGPPPDVVNQDPNNNLQEGTDPETEDPNHLPPDRDVLDGE
Sbjct: 300 YLHHVGWFPFRPRPVQNFPNDGPPPDVVNQDPNNNLQEGTDPETEDPNHLPPDRDVLDGE 359
Query: 361 QTSPSFMSTAWLVFKTFFASLLPEGPPAIAN 391
QTSPSFMSTAWLVFKTFFASLLPEGPPAIAN
Sbjct: 360 QTSPSFMSTAWLVFKTFFASLLPEGPPAIAN 390
>gi|58530859 homocysteine-inducible, endoplasmic reticulum
stress-inducible, ubiquitin-like domain member 1 isoform
3 [Homo sapiens]
Length = 366
Score = 749 bits (1934), Expect = 0.0
Identities = 366/391 (93%), Positives = 366/391 (93%), Gaps = 25/391 (6%)
Query: 1 MESETEPEPVTLLVKSPNQRHRDLELSGDRGWSVGHLKAHLSRVYPERPRPEDQRLIYSG 60
MESETEPEPVTLLVKSPNQRHRDLELSGDRGWSVGHLKAHLSRVYPERPRPEDQRLIYSG
Sbjct: 1 MESETEPEPVTLLVKSPNQRHRDLELSGDRGWSVGHLKAHLSRVYPERPRPEDQRLIYSG 60
Query: 61 KLLLDHQCLRDLLPKQEKRHVLHLVCNVKSPSKMPEINAKVAESTEEPAGSNRGQYPEDS 120
KLLLDHQCLRDLLPK VAESTEEPAGSNRGQYPEDS
Sbjct: 61 KLLLDHQCLRDLLPK-------------------------VAESTEEPAGSNRGQYPEDS 95
Query: 121 SSDGLRQREVLRNLSSPGWENISRPEAAQQAFQGLGPGFSGYTPYGWLQLSWFQQIYARQ 180
SSDGLRQREVLRNLSSPGWENISRPEAAQQAFQGLGPGFSGYTPYGWLQLSWFQQIYARQ
Sbjct: 96 SSDGLRQREVLRNLSSPGWENISRPEAAQQAFQGLGPGFSGYTPYGWLQLSWFQQIYARQ 155
Query: 181 YYMQYLAATAASGAFVPPPSAQEIPVVSAPAPAPIHNQFPAENQPANQNAAPQVVVNPGA 240
YYMQYLAATAASGAFVPPPSAQEIPVVSAPAPAPIHNQFPAENQPANQNAAPQVVVNPGA
Sbjct: 156 YYMQYLAATAASGAFVPPPSAQEIPVVSAPAPAPIHNQFPAENQPANQNAAPQVVVNPGA 215
Query: 241 NQNLRMNAQGGPIVEEDDEINRDWLDWTYSAATFSVFLSILYFYSSLSRFLMVMGATVVM 300
NQNLRMNAQGGPIVEEDDEINRDWLDWTYSAATFSVFLSILYFYSSLSRFLMVMGATVVM
Sbjct: 216 NQNLRMNAQGGPIVEEDDEINRDWLDWTYSAATFSVFLSILYFYSSLSRFLMVMGATVVM 275
Query: 301 YLHHVGWFPFRPRPVQNFPNDGPPPDVVNQDPNNNLQEGTDPETEDPNHLPPDRDVLDGE 360
YLHHVGWFPFRPRPVQNFPNDGPPPDVVNQDPNNNLQEGTDPETEDPNHLPPDRDVLDGE
Sbjct: 276 YLHHVGWFPFRPRPVQNFPNDGPPPDVVNQDPNNNLQEGTDPETEDPNHLPPDRDVLDGE 335
Query: 361 QTSPSFMSTAWLVFKTFFASLLPEGPPAIAN 391
QTSPSFMSTAWLVFKTFFASLLPEGPPAIAN
Sbjct: 336 QTSPSFMSTAWLVFKTFFASLLPEGPPAIAN 366
>gi|188497632 HERPUD family member 2 [Homo sapiens]
Length = 406
Score = 270 bits (689), Expect = 2e-72
Identities = 163/420 (38%), Positives = 230/420 (54%), Gaps = 59/420 (14%)
Query: 9 PVTLLVKSPNQRHRDLELSGDRGWSVGHLKAHLSRVYPERPRPEDQRLIYSGKLLLDHQC 68
PVTL++K+PNQ++ D +S W+VG LK HLS VYP +P +DQRL+YSG+LL DH
Sbjct: 9 PVTLIIKAPNQKYSDQTISCFLNWTVGKLKTHLSNVYPSKPLTKDQRLVYSGRLLPDHLQ 68
Query: 69 LRDLLPKQEKRHVLHLVCNVKSPSKMP---------EINAKVAESTEEPAGSNRGQYPED 119
L+D+L KQ++ H++HLVC ++P P E A + S+ + +GS ++
Sbjct: 69 LKDILRKQDEYHMVHLVCTSRTPPSSPKSSTNRESHEALASSSNSSSDHSGSTTPSSGQE 128
Query: 120 -------SSSDGLRQREVLR----NLSSPGWENISRPEAAQQ-AFQGLGPGFSGYTPYGW 167
SSS+GLRQR + + S + + + Q Q PGF Y +
Sbjct: 129 TLSLAVGSSSEGLRQRTLPQAQTDQAQSHQFPYVMQGNVDNQFPGQAAPPGFPVYPAFSP 188
Query: 168 LQLSWFQQIYARQYYMQYLAATAASGAF----VPPPSAQEIPVVSAPA--PAPIHNQFPA 221
LQ+ W+QQ+YA QYYMQY AA +A P ++Q + + P P P N
Sbjct: 189 LQMLWWQQMYAHQYYMQYQAAVSAQATSNVNPTQPTTSQPLNLAHVPGEEPPPAPNLVAQ 248
Query: 222 ENQPANQNAAPQVVVNPGANQNLRMNAQGGPIVEEDDEINRDWLDWTYSAATFSVFLSIL 281
EN+P N+N++MNAQGGP++ E+D NRDWLDW Y+ + ++ LSI+
Sbjct: 249 ENRP--------------MNENVQMNAQGGPVLNEED-FNRDWLDWMYTFSRAAILLSIV 293
Query: 282 YFYSSLSRFLMVMGATVVMYLHHVGWFPFRPR-PVQNFPNDGPPPDVVNQDPNNNLQEGT 340
YFYSS SRF+MVMGA +++YLH GWFPFR Q PN+ N + NN+ Q
Sbjct: 294 YFYSSFSRFIMVMGAMLLVYLHQAGWFPFRQEGGHQQAPNN-------NAEVNNDGQNAN 346
Query: 341 DPETEDPNHLP----PDRDVLDGEQTS-----PSFMSTAWLVFKTFFASLLPEGPPAIAN 391
+ E E+ L D DG + + P M++AW TFF SL+PEGPP +AN
Sbjct: 347 NLELEEMERLMDDGLEDESGEDGGEDASAIQRPGLMASAWSFITTFFTSLIPEGPPQVAN 406
>gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens]
Length = 825
Score = 37.4 bits (85), Expect = 0.023
Identities = 27/64 (42%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 183 MQYLAATAASG----AFVPPPSAQEIPVVSAPAPAPIHNQFPAENQPANQNAAPQVVVNP 238
+Q LAAT AS A V PP A+E P P PA + PAE QP AP V P
Sbjct: 593 IQLLAATEASAEEAPAEVQPPPAEEAPAEVQPPPA---EEAPAEVQPPPAEEAPAEVQPP 649
Query: 239 GANQ 242
A +
Sbjct: 650 PAEE 653
Score = 32.0 bits (71), Expect = 0.98
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 194 AFVPPPSAQEIPVVSAPAPAPIHNQFPAENQPANQNAAPQVVVNPGANQ 242
A V PP A+E P P PA + PAE QP AP V P A +
Sbjct: 632 AEVQPPPAEEAPAEVQPPPA---EEAPAEVQPPPAEEAPAEVQPPPAEE 677
Score = 29.6 bits (65), Expect = 4.9
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 10/47 (21%)
Query: 188 ATAASGAFVPPPSAQEIPVVSAPAPAPIHNQFPAENQPANQNAAPQV 234
A A + V PP A+E P+V +FPAE QP + +P V
Sbjct: 308 AVAENSVKVQPPPAEEAPLV----------EFPAEIQPPSAEESPSV 344
Score = 29.3 bits (64), Expect = 6.4
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Query: 194 AFVPPPSAQEIPVVSAPAPAPIHNQFPAENQPANQNAAPQVV 235
A V PP A+E P P PA + PAE QP AP V
Sbjct: 644 AEVQPPPAEEAPAEVQPPPA---EEAPAEVQPPPAEEAPAEV 682
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 36.6 bits (83), Expect = 0.040
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 186 LAATAASGAFVPPPSAQEIPVVSAPAPAPIHNQFPAENQPANQNAAPQVVVNPGANQNLR 245
+A A + A P P+ PV +APAPAP PA +AAPQ GANQ R
Sbjct: 164 VAVLAPAPAPAPAPAPAPAPV-AAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQR 222
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 36.6 bits (83), Expect = 0.040
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 186 LAATAASGAFVPPPSAQEIPVVSAPAPAPIHNQFPAENQPANQNAAPQVVVNPGANQNLR 245
+A A + A P P+ PV +APAPAP PA +AAPQ GANQ R
Sbjct: 164 VAVLAPAPAPAPAPAPAPAPV-AAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQR 222
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 36.6 bits (83), Expect = 0.040
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 186 LAATAASGAFVPPPSAQEIPVVSAPAPAPIHNQFPAENQPANQNAAPQVVVNPGANQNLR 245
+A A + A P P+ PV +APAPAP PA +AAPQ GANQ R
Sbjct: 175 VAVLAPAPAPAPAPAPAPAPV-AAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQR 233
>gi|7661990 mastermind-like 1 [Homo sapiens]
Length = 1016
Score = 36.6 bits (83), Expect = 0.040
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 15/132 (11%)
Query: 115 QYPEDSSSDGLRQREVLRNLSSPGWENISRPEAAQQAFQGLGPGFSGYTPY-GWLQLSWF 173
Q+ + + + GL + V R + G +N S G PG S +P+
Sbjct: 810 QHNKGTLNPGLTKPPVPRVSPAMGGQNSSWQHQGMPNLSGQTPGNSNVSPFTAASSFHMQ 869
Query: 174 QQIYARQYYMQY-----------LAATAASGAFVPPPSAQEIPVVSAPAPAPIHNQFPAE 222
QQ + + Q+ +++ AA G+ +PP SAQ+ APAP P P +
Sbjct: 870 QQAHLKMSSPQFSQAVPNRPMAPMSSAAAVGSLLPPVSAQQRTSAPAPAPPP---TAPQQ 926
Query: 223 NQPANQNAAPQV 234
P A P++
Sbjct: 927 GLPGLSPAGPEL 938
>gi|209915561 dynamin 3 isoform b [Homo sapiens]
Length = 859
Score = 34.3 bits (77), Expect = 0.20
Identities = 59/247 (23%), Positives = 97/247 (39%), Gaps = 64/247 (25%)
Query: 21 HRDLELSGDRGWSVGHLKAHLSR--VYPERP---------------RPEDQRLIYSGKLL 63
+R LEL+ D V KA L R VYP++ P+ +R + + + L
Sbjct: 596 YRFLELACDSQEDVDSWKASLLRAGVYPDKSVAENDENGQAENFSMDPQLERQVETIRNL 655
Query: 64 LD------HQCLRDLLPKQEKRHVLHLVCNVKSPSKMPEINAKVAESTEEPAGSNRGQYP 117
+D ++C+RDL+PK ++HL+ N E+ A++ S ++
Sbjct: 656 VDSYMSIINKCIRDLIPKT----IMHLMINNVKDFINSELLAQLYSSEDQ------NTLM 705
Query: 118 EDSSSDGLRQREVLRNLSSPGWENISRPEAAQQAFQGLGPGFSG--YTPY-GWLQLSWFQ 174
E+S+ R+ E+LR +A ++A +G + TP + SW Q
Sbjct: 706 EESAEQAQRRDEMLRMY-----------QALKEALGIIGDISTATVSTPAPPPVDDSWIQ 754
Query: 175 QIYARQYYMQYLAATAASGAFVPPPSAQEIPVVSAPAPAPIHNQFPAE--NQPANQNAAP 232
+ + P P+ Q P +SAP P + PA P + AP
Sbjct: 755 H---------------SRRSPPPSPTTQRRPTLSAPLARPTSGRGPAPAIPSPGPHSGAP 799
Query: 233 QVVVNPG 239
V PG
Sbjct: 800 PVPFRPG 806
>gi|7662274 epidermal Langerhans cell protein LCP1 [Homo sapiens]
Length = 621
Score = 34.3 bits (77), Expect = 0.20
Identities = 28/92 (30%), Positives = 35/92 (38%), Gaps = 6/92 (6%)
Query: 161 GYTPYGWLQLSWFQQIYARQYYMQYLAATAASGAFVPPPSAQEIPVVSAPAPAPIHNQFP 220
G T +Q S QI R AA AA+ +PPP Q P+ P P P Q
Sbjct: 403 GQTSTATIQPSQQAQIVTRSVLQAAAAAAAAASMQLPPPRLQPPPLQQMPQP-PTQQQVT 461
Query: 221 AENQPANQNAAPQVVVNPGANQNLRMNAQGGP 252
QP P + Q +R+N Q P
Sbjct: 462 ILQQP-----PPLQAMQQPPPQKVRINLQQQP 488
>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
Length = 1499
Score = 33.9 bits (76), Expect = 0.26
Identities = 28/105 (26%), Positives = 41/105 (39%), Gaps = 20/105 (19%)
Query: 153 QGLGPGFSGYTPYGWLQLSWFQQIYARQYYMQYLAATAASGAFVP--PPSAQEIPVVSAP 210
QG GPG S P Q ++ AA + G +P P + E P P
Sbjct: 1131 QGSGPGISNSQP--------------SQMHLNSAAAQSPMGMNLPGQQPLSHEPPPAMLP 1176
Query: 211 APAPIHNQFPAENQPANQNAAPQ--VVVNPGANQNLRMNAQGGPI 253
+P P+ + P PQ +++ PG +L NA GP+
Sbjct: 1177 SPTPLGSNIPLHPNAQGTGGPPQNSMMMAPGGPDSL--NAPCGPV 1219
>gi|5032033 RNA binding motif protein 6 [Homo sapiens]
Length = 1123
Score = 33.5 bits (75), Expect = 0.34
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 12/142 (8%)
Query: 4 ETEP-EPVTLLVKSPNQRHRDLELSGDRGWSVGHLKAHLSRVYP----ERP--RPEDQRL 56
E +P +P+ K P R R+ G +GH K R P E P R + +R
Sbjct: 588 EKQPNQPLRPADKEPEPRKRE---EGQES-RLGHQKREAERYLPPSRREGPTFRRDRERE 643
Query: 57 IYSGKLLLDHQCLRDLLPKQEKRHVLHLVCNVKSPS-KMPEINAKVAESTEEPAGSNRGQ 115
+SG+ D + +L + + ++ V P ++ N ++ ++ P G G
Sbjct: 644 SWSGETRQDGESKTIMLKRIYRSTPPEVIVEVLEPYVRLTTANVRIIKNRTGPMGHTYGF 703
Query: 116 YPEDSSSDGLRQREVLRNLSSP 137
DS ++ LR ++L+NL P
Sbjct: 704 IDLDSHAEALRVVKILQNLDPP 725
>gi|122056683 FRAS1 related extracellular matrix 1 [Homo sapiens]
Length = 2179
Score = 33.5 bits (75), Expect = 0.34
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Query: 141 NISRPEAAQQAFQGLGPGFSGYTPYGWLQLSWFQQIYARQYYMQYLAATAASGAFVPPPS 200
NI++P A + + GPG GY +G+LQ F I YY +
Sbjct: 560 NITKPPQAGEIMKKPGPGLIGYPVHGFLQRDLFNGII---YYRHFGGEIFEDSFQFVLWD 616
Query: 201 AQEIPVVSAPAPAPIH-----NQFPAE 222
+ E P +S P A IH +Q P E
Sbjct: 617 SHEPPNLSVPQVATIHITPVDDQLPKE 643
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 33.5 bits (75), Expect = 0.34
Identities = 34/136 (25%), Positives = 52/136 (38%), Gaps = 34/136 (25%)
Query: 145 PEAAQQAFQGLGPGFSGY-TPYGWLQ--LSWFQQIYARQYYMQYLAATAASGAFVPPPSA 201
P+ AQ Q GP S + +P G + +S FQQ + Y ++ G + PP+
Sbjct: 742 PQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAY 801
Query: 202 QEIPVVSAPAPAP---------IHNQFPA----------------ENQPANQNAAPQVVV 236
+P S P P +H Q P+ +N+P N +
Sbjct: 802 SGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPS 861
Query: 237 NPGANQNLRMNAQGGP 252
+PG M+ QGGP
Sbjct: 862 SPG------MSQQGGP 871
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 33.5 bits (75), Expect = 0.34
Identities = 34/136 (25%), Positives = 52/136 (38%), Gaps = 34/136 (25%)
Query: 145 PEAAQQAFQGLGPGFSGY-TPYGWLQ--LSWFQQIYARQYYMQYLAATAASGAFVPPPSA 201
P+ AQ Q GP S + +P G + +S FQQ + Y ++ G + PP+
Sbjct: 729 PQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAY 788
Query: 202 QEIPVVSAPAPAP---------IHNQFPA----------------ENQPANQNAAPQVVV 236
+P S P P +H Q P+ +N+P N +
Sbjct: 789 SGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPS 848
Query: 237 NPGANQNLRMNAQGGP 252
+PG M+ QGGP
Sbjct: 849 SPG------MSQQGGP 858
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 33.5 bits (75), Expect = 0.34
Identities = 34/136 (25%), Positives = 52/136 (38%), Gaps = 34/136 (25%)
Query: 145 PEAAQQAFQGLGPGFSGY-TPYGWLQ--LSWFQQIYARQYYMQYLAATAASGAFVPPPSA 201
P+ AQ Q GP S + +P G + +S FQQ + Y ++ G + PP+
Sbjct: 729 PQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAY 788
Query: 202 QEIPVVSAPAPAP---------IHNQFPA----------------ENQPANQNAAPQVVV 236
+P S P P +H Q P+ +N+P N +
Sbjct: 789 SGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPS 848
Query: 237 NPGANQNLRMNAQGGP 252
+PG M+ QGGP
Sbjct: 849 SPG------MSQQGGP 858
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 33.1 bits (74), Expect = 0.44
Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 30/176 (17%)
Query: 9 PVTLLVKSPNQRHRDLELSGDRGWSVGHLKAHLSRVYPERPRPEDQRLIYSGKLLLDHQC 68
P L+ N + R ++ ++G + L++ P P PE I + LD +C
Sbjct: 470 PSPLVTPGSNSQERYIQAEREKGILQ---ELFLNKESPHEPDPEPYEPIPPKLIPLDEEC 526
Query: 69 LRDLLPKQEKRHVLHLVCNVKSP-----SKMPEINAKVAESTEEPAGSNRGQYPEDSSSD 123
D P E L + SP SK+P + A + S G+ +G P+
Sbjct: 527 SMDETPYVE---TLEPGGSGGSPDGAGGSKLPPVLANLMGS----MGAGKG--PQGPGGG 577
Query: 124 GLRQREVLRNL-----SSPGWENISRPEAAQQAFQ--------GLGPGFSGYTPYG 166
G+ +E+L ++ S P E + +P+ + + Q G GP +G+ P G
Sbjct: 578 GINVQEILTSIMGSPNSHPSEELLKQPDYSDKIKQMLVPHGLLGPGPIANGFPPGG 633
>gi|149944548 neurobeachin-like 2 [Homo sapiens]
Length = 2754
Score = 33.1 bits (74), Expect = 0.44
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
Query: 169 QLSWFQQIYARQYYMQYLAATAASGAFVPPPSAQEIPVVSAPAPAPIHNQFPAE 222
Q W Q + R Y ++ AATA S PPPS+ E P PAP + PAE
Sbjct: 1281 QAGW-QDVLTRLYVLE--AATAGS----PPPSSPESPTSPKPAPPKPPTESPAE 1327
>gi|169173314 PREDICTED: hypothetical protein LOC286177 [Homo
sapiens]
Length = 287
Score = 32.7 bits (73), Expect = 0.58
Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 24/85 (28%)
Query: 151 AFQGLGPGFSGYTPYGWLQL----------SWFQQIYARQYY-----------MQYLAAT 189
A GL FS P W+QL +W Y R YY + + AT
Sbjct: 14 AAAGLELAFSPIPPLPWVQLQPPPEYGGVSNWGNPGYFRDYYRGPQGQTLPWRLSHAVAT 73
Query: 190 AASGAFVPPPSAQEIPVVSAPAPAP 214
AA+G + P PS +V+A PAP
Sbjct: 74 AAAGGWKPVPSP---ILVAAECPAP 95
>gi|42544243 dynamin 3 isoform a [Homo sapiens]
Length = 863
Score = 32.7 bits (73), Expect = 0.58
Identities = 59/251 (23%), Positives = 97/251 (38%), Gaps = 68/251 (27%)
Query: 21 HRDLELSGDRGWSVGHLKAHLSR--VYPERP-------------------RPEDQRLIYS 59
+R LEL+ D V KA L R VYP++ P+ +R + +
Sbjct: 596 YRFLELACDSQEDVDSWKASLLRAGVYPDKSVGNNKAENDENGQAENFSMDPQLERQVET 655
Query: 60 GKLLLD------HQCLRDLLPKQEKRHVLHLVCNVKSPSKMPEINAKVAESTEEPAGSNR 113
+ L+D ++C+RDL+PK ++HL+ N E+ A++ S ++
Sbjct: 656 IRNLVDSYMSIINKCIRDLIPKT----IMHLMINNVKDFINSELLAQLYSSEDQ------ 705
Query: 114 GQYPEDSSSDGLRQREVLRNLSSPGWENISRPEAAQQAFQGLGPGFSG--YTPY-GWLQL 170
E+S+ R+ E+LR +A ++A +G + TP +
Sbjct: 706 NTLMEESAEQAQRRDEMLRMY-----------QALKEALGIIGDISTATVSTPAPPPVDD 754
Query: 171 SWFQQIYARQYYMQYLAATAASGAFVPPPSAQEIPVVSAPAPAPIHNQFPAE--NQPANQ 228
SW Q + + P P+ Q P +SAP P + PA P
Sbjct: 755 SWIQH---------------SRRSPPPSPTTQRRPTLSAPLARPTSGRGPAPAIPSPGPH 799
Query: 229 NAAPQVVVNPG 239
+ AP V PG
Sbjct: 800 SGAPPVPFRPG 810
>gi|8659574 transcription factor E3 [Homo sapiens]
Length = 575
Score = 32.0 bits (71), Expect = 0.98
Identities = 36/141 (25%), Positives = 55/141 (39%), Gaps = 13/141 (9%)
Query: 136 SPGWENISRPEAAQQAFQGLGPGFSGYTPYGW-LQLSWFQQIYARQYYMQYLAATAASGA 194
S G +SRP AQ + L P + LQ + QQ+ +QY L AS A
Sbjct: 158 SAGGHTLSRPPPAQVPREVLKVQTHLENPTRYHLQQARRQQV--KQYLSTTLGPKLASQA 215
Query: 195 FVPPPSAQEIPVVSAPAPAP--IHNQFPAENQPANQNAAPQVVVNPGANQNLRMNAQGGP 252
PPP P + P PAP H P + P +P ++ G++ ++
Sbjct: 216 LTPPPG----PASAQPLPAPEAAHTTGPTGSAP----NSPMALLTIGSSSEKEIDDVIDE 267
Query: 253 IVEEDDEINRDWLDWTYSAAT 273
I+ + N + L + T
Sbjct: 268 IISLESSYNDEMLSYLPGGTT 288
>gi|38787935 BMP-2 inducible kinase isoform a [Homo sapiens]
Length = 1161
Score = 32.0 bits (71), Expect = 0.98
Identities = 25/100 (25%), Positives = 42/100 (42%), Gaps = 15/100 (15%)
Query: 174 QQIYARQYYMQYLAATAASGAFVPPPSAQEIPVVSAP-APAPIHNQFPAENQPANQNAAP 232
QQ+ +Q+ M + P PSA + P + A Q A++QP+ Q A+P
Sbjct: 511 QQMLQQQFLMH--------SVYQPQPSASQYPTMMPQYQQAFFQQQMLAQHQPSQQQASP 562
Query: 233 QVVVNPG------ANQNLRMNAQGGPIVEEDDEINRDWLD 266
+ + +P + + AQ G I++ NR D
Sbjct: 563 EYLTSPQEFSPALVSYTSSLPAQVGTIMDSSYSANRSVAD 602
>gi|38787904 BMP-2 inducible kinase isoform b [Homo sapiens]
Length = 662
Score = 32.0 bits (71), Expect = 0.98
Identities = 25/100 (25%), Positives = 42/100 (42%), Gaps = 15/100 (15%)
Query: 174 QQIYARQYYMQYLAATAASGAFVPPPSAQEIPVVSAP-APAPIHNQFPAENQPANQNAAP 232
QQ+ +Q+ M + P PSA + P + A Q A++QP+ Q A+P
Sbjct: 511 QQMLQQQFLMH--------SVYQPQPSASQYPTMMPQYQQAFFQQQMLAQHQPSQQQASP 562
Query: 233 QVVVNPG------ANQNLRMNAQGGPIVEEDDEINRDWLD 266
+ + +P + + AQ G I++ NR D
Sbjct: 563 EYLTSPQEFSPALVSYTSSLPAQVGTIMDSSYSANRSVAD 602
>gi|50428940 mediator complex subunit 25 [Homo sapiens]
Length = 747
Score = 32.0 bits (71), Expect = 0.98
Identities = 46/169 (27%), Positives = 63/169 (37%), Gaps = 25/169 (14%)
Query: 108 PAGSNRGQYPEDSSSDGLRQREVLRNLSSPGWENISRPEAAQQAFQGLGPGFSGYTPYGW 167
P+G+ P+ Q +V NLS+ + EAA+ GLGP FS TP
Sbjct: 252 PSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITP--- 308
Query: 168 LQLSW------FQQIYARQYYMQYLAATAASGAFVPPPSAQEIPVVSAPAPAPIHNQFPA 221
LQ + F Q A Q GA PPP++Q +VS AP +
Sbjct: 309 LQQAAPGVGPPFSQAPAPQ------LPPGPPGAPKPPPASQP-SLVSTVAPG-------S 354
Query: 222 ENQPANQNAAPQV--VVNPGANQNLRMNAQGGPIVEEDDEINRDWLDWT 268
P Q AP + V PG G P + ++ L W+
Sbjct: 355 GLAPTAQPGAPSMAGTVAPGGVSGPSPAQLGAPALGGQQSVSNKLLAWS 403
>gi|13376439 ubiquitin domain containing 1 [Homo sapiens]
Length = 227
Score = 32.0 bits (71), Expect = 0.98
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 22 RDLELSGDRGWSVGHLKAHLSRVYPERPRPEDQRLIYSGKLLLDHQCLRDLLPKQEKRHV 81
+D+ LS +VG LK L E P QR +SGKLL D L++ K +K V
Sbjct: 159 KDVRLSASLPDTVGQLKRQLHA--QEGIEPSWQRWFFSGKLLTDRTRLQE--TKIQKDFV 214
Query: 82 LHLVCNVKSP 91
+ ++ N P
Sbjct: 215 IQVIINQPPP 224
>gi|169205253 PREDICTED: hypothetical protein [Homo sapiens]
Length = 3859
Score = 31.6 bits (70), Expect = 1.3
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 189 TAASGAFVPPPSAQEIPVVSAPAPAPIHNQFPAENQPANQNAAPQVVVNPGANQNLRMNA 248
T A F+P +A ++ V PA +P+ + PAE +P + V P + + +
Sbjct: 511 TPADSPFIPVTTADDLIVPVTPADSPVLSVTPAE--------SPAIPVTPADSPIVPVTP 562
Query: 249 QGGPIV 254
GP+V
Sbjct: 563 ANGPVV 568
Score = 29.6 bits (65), Expect = 4.9
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Query: 189 TAASGAFVPPPSAQEIPVVSAPAPAPIHNQFPAEN--QPANQNAAPQVVVNPGANQNLRM 246
T+A G VP SA +PV PA P+ A+ P + P V V P + + +
Sbjct: 1731 TSADGPVVPVTSADSLPVPVTPADGPVVPVTSADGPVAPVSSADGPVVPVTPADSPVVPV 1790
Query: 247 NAQGGPIV 254
P V
Sbjct: 1791 TTADDPTV 1798
>gi|154354972 phosphatase and actin regulator 2 isoform 4 [Homo
sapiens]
Length = 554
Score = 31.6 bits (70), Expect = 1.3
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 7/48 (14%)
Query: 194 AFVPPPSAQEIPVVSAPAPAPIHNQFPAENQPANQNAAPQVVVNPGAN 241
+ VPPP PV APAP+P+ P E+Q + P V+V+ GA+
Sbjct: 242 SMVPPP-----PV--APAPSPLAPPLPLEDQCITASDTPVVLVSVGAD 282
>gi|154354974 phosphatase and actin regulator 2 isoform 3 [Homo
sapiens]
Length = 634
Score = 31.6 bits (70), Expect = 1.3
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 7/48 (14%)
Query: 194 AFVPPPSAQEIPVVSAPAPAPIHNQFPAENQPANQNAAPQVVVNPGAN 241
+ VPPP PV APAP+P+ P E+Q + P V+V+ GA+
Sbjct: 322 SMVPPP-----PV--APAPSPLAPPLPLEDQCITASDTPVVLVSVGAD 362
>gi|154354970 phosphatase and actin regulator 2 isoform 2 [Homo
sapiens]
Length = 565
Score = 31.6 bits (70), Expect = 1.3
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 7/48 (14%)
Query: 194 AFVPPPSAQEIPVVSAPAPAPIHNQFPAENQPANQNAAPQVVVNPGAN 241
+ VPPP PV APAP+P+ P E+Q + P V+V+ GA+
Sbjct: 253 SMVPPP-----PV--APAPSPLAPPLPLEDQCITASDTPVVLVSVGAD 293
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,139,259
Number of Sequences: 37866
Number of extensions: 1041605
Number of successful extensions: 4393
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 4232
Number of HSP's gapped (non-prelim): 207
length of query: 391
length of database: 18,247,518
effective HSP length: 104
effective length of query: 287
effective length of database: 14,309,454
effective search space: 4106813298
effective search space used: 4106813298
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.