UBTD1 3216

Name: UBTD1	Sequence: fasta or formatted (227aa)		NCBI GI: 13376439
Description: ubiquitin domain containing 1		Referenced in: Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.5 17 3 C cysteine 1.8 4 1 D aspartate 5.7 13 1 E glutamate 8.8 20 3 F phenylalanine 2.6 6 2 G glycine 5.7 13 1 H histidine 2.2 5 1 I isoleucine 4.0 9 2 K lysine 6.2 14 2 L leucine 10.6 24 3 M methionine 0.9 2 1 N asparagine 2.6 6 1 P proline 9.7 22 4 Q glutamine 5.7 13 1 R arginine 8.8 20 2 S serine 4.8 11 1 T threonine 4.4 10 1 V valine 3.5 8 1 W tryptophan 2.2 5 1 Y tyrosine 2.2 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ubiquitin domain containing 1 UBTD2 0.630 dendritic cell-derived ubiquitin-like protein [Homo... UBB 0.051 ubiquitin B precursor RPS27A 0.051 ubiquitin and ribosomal protein S27a precursor [Hom... RPS27A 0.051 ubiquitin and ribosomal protein S27a precursor UBC 0.051 ubiquitin C UBA52 0.051 ubiquitin and ribosomal protein L40 precursor UBA52 0.051 ubiquitin and ribosomal protein L40 precursor LOC100128355 0.047 PREDICTED: similar to hCG1790904 LOC100128355 0.047 PREDICTED: similar to hCG1790904 LOC100128355 0.047 PREDICTED: similar to hCG1790904 NEDD8 0.045 neural precursor cell expressed, developmentally down... UHRF1 0.022 ubiquitin-like with PHD and ring finger domains 1 i... UHRF1 0.020 ubiquitin-like with PHD and ring finger domains 1 i... HERPUD1 0.016 homocysteine-inducible, endoplasmic reticulum stress-... UBQLN3 0.016 ubiquilin 3 UBFD1 0.016 ubiquitin-binding protein homolog OPHN1 0.013 oligophrenin 1 N4BP3 0.013 Nedd4 binding protein 3 SH2D5 0.013 SH2 domain containing 5 isoform 2 SH2D5 0.013 SH2 domain containing 5 isoform 1 DOCK8 0.011 dedicator of cytokinesis 8 KANK4 0.011 ankyrin repeat domain 38 HERPUD1 0.011 homocysteine-inducible, endoplasmic reticulum stress... ISG15 0.011 ISG15 ubiquitin-like modifier UBL4B 0.011 ubiquitin-like 4B EFHC2 0.009 EF-hand domain (C-terminal) containing 2 RAD23A 0.009 UV excision repair protein RAD23 homolog A NKX2-4 0.009 NK2 homeobox 4 UBQLN4 0.009 ataxin-1 ubiquitin-like interacting protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.