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Search of human proteins with 7661592
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7661592 ASF1 anti-silencing function 1 homolog A [Homo
sapiens]
(204 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7661592 ASF1 anti-silencing function 1 homolog A [Homo sapiens] 417 e-117
gi|8922549 anti-silencing function 1B [Homo sapiens] 293 5e-80
gi|56682966 transforming growth factor, beta receptor III [Homo ... 30 1.1
gi|4827024 T-box 19 [Homo sapiens] 30 1.9
gi|110349719 titin isoform N2-A [Homo sapiens] 28 4.1
gi|110349717 titin isoform novex-2 [Homo sapiens] 28 4.1
gi|110349713 titin isoform novex-1 [Homo sapiens] 28 4.1
gi|110349715 titin isoform N2-B [Homo sapiens] 28 4.1
gi|23238214 angiotensin I converting enzyme 1 isoform 2 precurso... 28 4.1
gi|8923842 forkhead box J2 [Homo sapiens] 28 4.1
gi|21361458 Rho guanine nucleotide exchange factor (GEF) 17 [Hom... 28 5.4
gi|126131099 guanine nucleotide exchange factor p532 [Homo sapiens] 28 5.4
gi|125628636 keratin 80 isoform a [Homo sapiens] 28 7.1
gi|125628632 keratin 80 isoform b [Homo sapiens] 28 7.1
gi|133778961 testis expressed 15 [Homo sapiens] 28 7.1
gi|239756399 PREDICTED: similar to hCG32587 [Homo sapiens] 27 9.2
gi|169209349 PREDICTED: similar to golgi autoantigen, golgin sub... 27 9.2
gi|169208321 PREDICTED: similar to golgi autoantigen, golgin sub... 27 9.2
>gi|7661592 ASF1 anti-silencing function 1 homolog A [Homo sapiens]
Length = 204
Score = 417 bits (1073), Expect = e-117
Identities = 204/204 (100%), Positives = 204/204 (100%)
Query: 1 MAKVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLDSV 60
MAKVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLDSV
Sbjct: 1 MAKVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLDSV 60
Query: 61 LVGPVPAGRHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTET 120
LVGPVPAGRHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTET
Sbjct: 61 LVGPVPAGRHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTET 120
Query: 121 ELRENPPVKPDFSKLQRNILASNPRVTRFHINWEDNTEKLEDAESSNPNLQSLLSTDALP 180
ELRENPPVKPDFSKLQRNILASNPRVTRFHINWEDNTEKLEDAESSNPNLQSLLSTDALP
Sbjct: 121 ELRENPPVKPDFSKLQRNILASNPRVTRFHINWEDNTEKLEDAESSNPNLQSLLSTDALP 180
Query: 181 SASKGWSTSENSLNVMLESHMDCM 204
SASKGWSTSENSLNVMLESHMDCM
Sbjct: 181 SASKGWSTSENSLNVMLESHMDCM 204
>gi|8922549 anti-silencing function 1B [Homo sapiens]
Length = 202
Score = 293 bits (751), Expect = 5e-80
Identities = 144/204 (70%), Positives = 168/204 (82%), Gaps = 2/204 (0%)
Query: 1 MAKVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLDSV 60
MAKV V NV VL+NPSPF++PF+FEI+FEC E L++DLEWKIIYVGSAESEE+DQ+LDSV
Sbjct: 1 MAKVSVLNVAVLENPSPFHSPFRFEISFECSEALADDLEWKIIYVGSAESEEFDQILDSV 60
Query: 61 LVGPVPAGRHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTET 120
LVGPVPAGRHMFVFQADAPNP LIP+ DAVGVTVVLITCTY GQEFIRVGYYVNNEY
Sbjct: 61 LVGPVPAGRHMFVFQADAPNPSLIPETDAVGVTVVLITCTYHGQEFIRVGYYVNNEYLNP 120
Query: 121 ELRENPPVKPDFSKLQRNILASNPRVTRFHINWEDNTEKLEDAESSNPNLQSLLSTDALP 180
ELRENPP+KPDFS+LQRNILASNPRVTRFHINW++N ++LE E+ +P+L L + P
Sbjct: 121 ELRENPPMKPDFSQLQRNILASNPRVTRFHINWDNNMDRLEAIETQDPSLGCGLPLNCTP 180
Query: 181 SASKGWSTSENSLNVMLESHMDCM 204
KG ++ E+ MDC+
Sbjct: 181 --IKGLGLPGCIPGLLPENSMDCI 202
>gi|56682966 transforming growth factor, beta receptor III [Homo
sapiens]
Length = 851
Score = 30.4 bits (67), Expect = 1.1
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 144 PRVTRFHINWEDNTEKLEDAE--SSNPNLQSLLSTDALPS 181
P RFH+ E+N E++ D E + P L+ LL ALP+
Sbjct: 346 PVANRFHLRLENNAEEMGDEEVHTIPPELRILLDPGALPA 385
>gi|4827024 T-box 19 [Homo sapiens]
Length = 448
Score = 29.6 bits (65), Expect = 1.9
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 95 VLITCTYRGQEFIRVGYYVNNEYTETELRENPPVKPDFSKLQRNILASNP 144
++ C++ +FI V Y N E T +++ NP K +RN L P
Sbjct: 180 MVTNCSFPETQFIAVTAYQNEEITALKIKYNPFAKAFLDAKERNHLRDVP 229
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 28.5 bits (62), Expect = 4.1
Identities = 32/132 (24%), Positives = 50/132 (37%), Gaps = 30/132 (22%)
Query: 9 VVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLDSVLVGPVPAG 68
V++LD P P P I + I+ S + W E E D G P
Sbjct: 29826 VIILDKPGPPTGP----IKIDEIDATSITISW--------EPPELD--------GGAPLS 29865
Query: 69 RHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFI---------RVGYYVNNEYTE 119
++ V Q DA PG +P +++V + T G E++ +G Y+ +E E
Sbjct: 29866 GYV-VEQRDAHRPGWLPVSESVTRSTFKFTRLTEGNEYVFRVAATNRFGIGSYLQSEVIE 29924
Query: 120 TELRENPPVKPD 131
P P+
Sbjct: 29925 CRSSIRIPGPPE 29936
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 28.5 bits (62), Expect = 4.1
Identities = 32/132 (24%), Positives = 50/132 (37%), Gaps = 30/132 (22%)
Query: 9 VVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLDSVLVGPVPAG 68
V++LD P P P I + I+ S + W E E D G P
Sbjct: 23521 VIILDKPGPPTGP----IKIDEIDATSITISW--------EPPELD--------GGAPLS 23560
Query: 69 RHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFI---------RVGYYVNNEYTE 119
++ V Q DA PG +P +++V + T G E++ +G Y+ +E E
Sbjct: 23561 GYV-VEQRDAHRPGWLPVSESVTRSTFKFTRLTEGNEYVFRVAATNRFGIGSYLQSEVIE 23619
Query: 120 TELRENPPVKPD 131
P P+
Sbjct: 23620 CRSSIRIPGPPE 23631
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 28.5 bits (62), Expect = 4.1
Identities = 32/132 (24%), Positives = 50/132 (37%), Gaps = 30/132 (22%)
Query: 9 VVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLDSVLVGPVPAG 68
V++LD P P P I + I+ S + W E E D G P
Sbjct: 23454 VIILDKPGPPTGP----IKIDEIDATSITISW--------EPPELD--------GGAPLS 23493
Query: 69 RHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFI---------RVGYYVNNEYTE 119
++ V Q DA PG +P +++V + T G E++ +G Y+ +E E
Sbjct: 23494 GYV-VEQRDAHRPGWLPVSESVTRSTFKFTRLTEGNEYVFRVAATNRFGIGSYLQSEVIE 23552
Query: 120 TELRENPPVKPD 131
P P+
Sbjct: 23553 CRSSIRIPGPPE 23564
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 28.5 bits (62), Expect = 4.1
Identities = 32/132 (24%), Positives = 50/132 (37%), Gaps = 30/132 (22%)
Query: 9 VVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLDSVLVGPVPAG 68
V++LD P P P I + I+ S + W E E D G P
Sbjct: 23329 VIILDKPGPPTGP----IKIDEIDATSITISW--------EPPELD--------GGAPLS 23368
Query: 69 RHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFI---------RVGYYVNNEYTE 119
++ V Q DA PG +P +++V + T G E++ +G Y+ +E E
Sbjct: 23369 GYV-VEQRDAHRPGWLPVSESVTRSTFKFTRLTEGNEYVFRVAATNRFGIGSYLQSEVIE 23427
Query: 120 TELRENPPVKPD 131
P P+
Sbjct: 23428 CRSSIRIPGPPE 23439
>gi|23238214 angiotensin I converting enzyme 1 isoform 2 precursor
[Homo sapiens]
Length = 732
Score = 28.5 bits (62), Expect = 4.1
Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 23/113 (20%)
Query: 75 QADAPNPGLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTETELRENPPVKPDFSK 134
Q A +P L+ D V +E+ R V NEY E N + + SK
Sbjct: 60 QTSAQSPNLVTDEAEASKFV---------EEYDRTSQVVWNEYAEANWNYNTNITTETSK 110
Query: 135 --LQRNILASN------PRVTRFHINWEDNT------EKLEDAESSNPNLQSL 173
LQ+N+ +N + +F +N NT +K++D E + Q L
Sbjct: 111 ILLQKNMQIANHTLKYGTQARKFDVNQLQNTTIKRIIKKVQDLERAALPAQEL 163
>gi|8923842 forkhead box J2 [Homo sapiens]
Length = 574
Score = 28.5 bits (62), Expect = 4.1
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 13 DNPSPFYNPFQFEITFECIEDLSEDLEWKI--IYVGSAE-SEEYDQVLDSVLVGPVPAGR 69
+ P P YN + F E +DL W +Y E S Q S L+G +P
Sbjct: 227 EGPPPLYNT-NHDFKFSYSEINFQDLSWSFRNLYKSMLEKSSSSSQHGFSSLLGDIPPSN 285
Query: 70 HMFVFQADAPNP 81
+ +++Q P P
Sbjct: 286 NYYMYQQQQPPP 297
>gi|21361458 Rho guanine nucleotide exchange factor (GEF) 17 [Homo
sapiens]
Length = 2063
Score = 28.1 bits (61), Expect = 5.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 45 VGSAESEEYDQVLDSVLVGPVPAGR 69
VGS ES+ Y +V+ S++ GP GR
Sbjct: 788 VGSEESKGYQEVIQSIVQGPGTLGR 812
>gi|126131099 guanine nucleotide exchange factor p532 [Homo sapiens]
Length = 4861
Score = 28.1 bits (61), Expect = 5.4
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 32 EDLSEDLEWKIIYVGSAESEEYDQVLDSVLVGPVPAGRHMFVFQADAPNPGLIPDADAVG 91
+D + +W ++ V E ++ + +L GP+ V P P PD+D +G
Sbjct: 3069 QDSVYEEDWDMLDVDEDEKLTGEEEFE-LLAGPLGLNDRRIV-----PEPVQFPDSDPLG 3122
Query: 92 VTVVLITCTYRGQE 105
+V ++T T +E
Sbjct: 3123 ASVAMVTATNSMEE 3136
>gi|125628636 keratin 80 isoform a [Homo sapiens]
Length = 452
Score = 27.7 bits (60), Expect = 7.1
Identities = 18/68 (26%), Positives = 29/68 (42%)
Query: 112 YVNNEYTETELRENPPVKPDFSKLQRNILASNPRVTRFHINWEDNTEKLEDAESSNPNLQ 171
++ EY E V + +L+ N+L +V F I +ED K D E + L+
Sbjct: 130 HLYEEYQGRLQEELRKVSQERGQLEANLLQVLEKVEEFRIRYEDEISKRTDMEFTFVQLK 189
Query: 172 SLLSTDAL 179
L + L
Sbjct: 190 KDLDAECL 197
>gi|125628632 keratin 80 isoform b [Homo sapiens]
Length = 422
Score = 27.7 bits (60), Expect = 7.1
Identities = 18/68 (26%), Positives = 29/68 (42%)
Query: 112 YVNNEYTETELRENPPVKPDFSKLQRNILASNPRVTRFHINWEDNTEKLEDAESSNPNLQ 171
++ EY E V + +L+ N+L +V F I +ED K D E + L+
Sbjct: 130 HLYEEYQGRLQEELRKVSQERGQLEANLLQVLEKVEEFRIRYEDEISKRTDMEFTFVQLK 189
Query: 172 SLLSTDAL 179
L + L
Sbjct: 190 KDLDAECL 197
>gi|133778961 testis expressed 15 [Homo sapiens]
Length = 2789
Score = 27.7 bits (60), Expect = 7.1
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Query: 109 VGYYVNNEYTETELRENPPVKPDFSKLQRNILASNPRVTRFHINWEDNTEKLEDAESSNP 168
+G + N E+ E++L + + + N SNP ++ H + T L + S+
Sbjct: 1123 MGEFCNQEHPESQLPVSSTSQSTSQSVYYNSSVSNPSLSEEHQPFSGKTAYLFSPDHSDE 1182
Query: 169 NL---QSLLSTDALPSASKGWSTSENSLN 194
L ++ + T L S SK ++S N
Sbjct: 1183 KLIEKENQIDTAFLSSTSKYEKLEKHSAN 1211
>gi|239756399 PREDICTED: similar to hCG32587 [Homo sapiens]
Length = 306
Score = 27.3 bits (59), Expect = 9.2
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 150 HINWEDNTEKLEDAESSNPNLQSLLSTDALPSASKGWSTSE 190
H ++ E+LE N LQS +S ALP G + E
Sbjct: 255 HQELKETQERLEATSQQNQQLQSQMSLMALPGEGTGHHSEE 295
>gi|169209349 PREDICTED: similar to golgi autoantigen, golgin
subfamily a, 2, partial [Homo sapiens]
Length = 97
Score = 27.3 bits (59), Expect = 9.2
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 150 HINWEDNTEKLEDAESSNPNLQSLLSTDALPSASKGWSTSE 190
H ++ E+LE N LQS +S ALP G + E
Sbjct: 46 HQELKETQERLEATSQQNQQLQSQMSLMALPGEGTGHHSEE 86
>gi|169208321 PREDICTED: similar to golgi autoantigen, golgin
subfamily a, 2, partial [Homo sapiens]
Length = 97
Score = 27.3 bits (59), Expect = 9.2
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 150 HINWEDNTEKLEDAESSNPNLQSLLSTDALPSASKGWSTSE 190
H ++ E+LE N LQS +S ALP G + E
Sbjct: 46 HQELKETQERLEATSQQNQQLQSQMSLMALPGEGTGHHSEE 86
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,223,225
Number of Sequences: 37866
Number of extensions: 363167
Number of successful extensions: 725
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 691
Number of HSP's gapped (non-prelim): 47
length of query: 204
length of database: 18,247,518
effective HSP length: 97
effective length of query: 107
effective length of database: 14,574,516
effective search space: 1559473212
effective search space used: 1559473212
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.