Guide to the Human Genome
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Name: ASF1B Sequence: fasta or formatted (202aa) NCBI GI: 8922549
Description:

anti-silencing function 1B

Referenced in:

Histones, Related Proteins, and Modifying Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         11           1
 C cysteine            3.0          6           1
 D aspartate           5.4         11           2
 E glutamate           7.9         16           2
 F phenylalanine       5.0         10           1
 G glycine             5.9         12           1
 H histidine           2.0          4           1
 I isoleucine          6.4         13           2
 K lysine              2.0          4           1
 L leucine             9.9         20           2
 M methionine          2.5          5           1
 N asparagine          6.9         14           2
 P proline             9.4         19           2
 Q glutamine           3.0          6           1
 R arginine            4.0          8           1
 S serine              6.4         13           1
 T threonine           3.5          7           1
 V valine              7.9         16           2
 W tryptophan          1.0          2           1
 Y tyrosine            2.5          5           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   anti-silencing function 1B 
ASF1A                 0.678   ASF1 anti-silencing function 1 homolog A 
ABHD3                 0.010   alpha/beta hydrolase domain containing protein 3 [Ho...
CDK4                  0.010   cyclin-dependent kinase 4 
PKHD1                 0.010   fibrocystin isoform 2 
PKHD1                 0.010   fibrocystin isoform 1 
PMPCB                 0.008   mitochondrial processing peptidase beta subunit prec...
FOXJ2                 0.008   forkhead box J2 
CERCAM                0.008   cerebral endothelial cell adhesion molecule 1 [Homo...
MAP3K4                0.008   mitogen-activated protein kinase kinase kinase 4 iso...
MAP3K4                0.008   mitogen-activated protein kinase kinase kinase 4 iso...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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