Guide to the Human Genome
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Name: ASF1A Sequence: fasta or formatted (204aa) NCBI GI: 7661592
Description:

ASF1 anti-silencing function 1 homolog A

Referenced in:

Histones, Related Proteins, and Modifying Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         11           1
 C cysteine            1.5          3           1
 D aspartate           6.4         13           1
 E glutamate           9.3         19           2
 F phenylalanine       4.4          9           1
 G glycine             3.9          8           1
 H histidine           1.5          3           1
 I isoleucine          4.4          9           2
 K lysine              2.9          6           1
 L leucine             8.3         17           2
 M methionine          2.5          5           1
 N asparagine          7.8         16           2
 P proline             6.9         14           2
 Q glutamine           3.4          7           1
 R arginine            3.4          7           1
 S serine              8.3         17           2
 T threonine           4.9         10           1
 V valine              9.8         20           3
 W tryptophan          1.5          3           1
 Y tyrosine            3.4          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ASF1 anti-silencing function 1 homolog A 
ASF1B                 0.684   anti-silencing function 1B 
TGFBR3                0.013   transforming growth factor, beta receptor III 
TBX19                 0.013   T-box 19 
TTN                   0.008   titin isoform N2-A 
TTN                   0.008   titin isoform novex-2 
TTN                   0.008   titin isoform novex-1 
TTN                   0.008   titin isoform N2-B 
ACE                   0.008   angiotensin I converting enzyme 1 isoform 2 precurso...
FOXJ2                 0.008   forkhead box J2 
ARHGEF17              0.008   Rho guanine nucleotide exchange factor (GEF) 17 [Hom...
HERC1                 0.008   guanine nucleotide exchange factor p532 
KRT80                 0.008   keratin 80 isoform a 
KRT80                 0.008   keratin 80 isoform b 
TEX15                 0.008   testis expressed 15 
LOC390638             0.005   PREDICTED: similar to hCG32587 
LOC100131061          0.005   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC100131061          0.005   PREDICTED: similar to golgi autoantigen, golgin sub...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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