Guide to the Human Genome
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Name: MRPL22 Sequence: fasta or formatted (206aa) NCBI GI: 21265040
Description:

mitochondrial ribosomal protein L22 isoform a

Referenced in:

Ribosomes

Other entries for this name:
alt prot [126aa] mitochondrial ribosomal protein L22 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         17           3
 C cysteine            1.5          3           1
 D aspartate           2.9          6           1
 E glutamate           5.8         12           1
 F phenylalanine       1.9          4           1
 G glycine             6.3         13           1
 H histidine           3.9          8           1
 I isoleucine          7.3         15           2
 K lysine              8.7         18           2
 L leucine             9.7         20           2
 M methionine          2.4          5           1
 N asparagine          2.4          5           1
 P proline             6.3         13           5
 Q glutamine           4.9         10           2
 R arginine            8.3         17           2
 S serine              5.3         11           1
 T threonine           2.4          5           1
 V valine              5.3         11           1
 W tryptophan          1.5          3           1
 Y tyrosine            4.9         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial ribosomal protein L22 isoform a 
MRPL22                0.589   mitochondrial ribosomal protein L22 isoform b 
LOC100292865          0.015   PREDICTED: hypothetical protein 
HYDIN                 0.015   hydrocephalus inducing isoform a 
CD96                  0.010   CD96 antigen isoform 1 precursor 
CD96                  0.010   CD96 antigen isoform 2 precursor 
PPM1B                 0.010   protein phosphatase 1B isoform 3 
PPM1B                 0.010   protein phosphatase 1B isoform 1 
ZC3H18                0.010   zinc finger CCCH-type containing 18 
IDH1                  0.010   isocitrate dehydrogenase 1 (NADP+), soluble 
DKFZp686L13185        0.010   PREDICTED: hypothetical protein LOC401287 
C11orf41              0.010   hypothetical protein LOC25758 
PLA2G2E               0.010   phospholipase A2, group IIE 
PRR11                 0.010   proline rich 11 
CASKIN1               0.008   CASK interacting protein 1 
TTN                   0.008   titin isoform N2-A 
SULF2                 0.008   sulfatase 2 isoform a precursor 
SULF2                 0.008   sulfatase 2 isoform b precursor 
SULF2                 0.008   sulfatase 2 isoform a precursor 
DKFZp686L13185        0.008   PREDICTED: hypothetical protein LOC401287 
DKFZp686L13185        0.008   PREDICTED: hypothetical protein LOC401287 
SOBP                  0.008   sine oculis binding protein homolog 
ZFHX2                 0.008   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.008   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.008   PREDICTED: zinc finger homeobox 2 
LOC100129571          0.005   PREDICTED: similar to hCG1646049 
LOC100129571          0.005   PREDICTED: similar to hCG1646049 
LOC100129571          0.005   PREDICTED: similar to hCG1646049 
PGK2                  0.005   phosphoglycerate kinase 2 
EFS                   0.005   embryonal Fyn-associated substrate isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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