Guide to the Human Genome
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Name: MRPL22 Sequence: fasta or formatted (126aa) NCBI GI: 62530388
Description:

mitochondrial ribosomal protein L22 isoform b

Referenced in:

Ribosomes

Other entries for this name:
alt prot [206aa] mitochondrial ribosomal protein L22 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         10           1
 C cysteine            1.6          2           1
 D aspartate           3.2          4           1
 E glutamate           7.1          9           1
 F phenylalanine       3.2          4           1
 G glycine             6.3          8           1
 H histidine           4.0          5           1
 I isoleucine          7.1          9           2
 K lysine              7.9         10           2
 L leucine             8.7         11           2
 M methionine          3.2          4           1
 N asparagine          2.4          3           1
 P proline             5.6          7           5
 Q glutamine           4.8          6           2
 R arginine            7.9         10           1
 S serine              4.0          5           1
 T threonine           3.2          4           1
 V valine              6.3          8           1
 W tryptophan          0.8          1           1
 Y tyrosine            4.8          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial ribosomal protein L22 isoform b 
MRPL22                1.000   mitochondrial ribosomal protein L22 isoform a 
LOC100292865          0.026   PREDICTED: hypothetical protein 
CD96                  0.017   CD96 antigen isoform 1 precursor 
CD96                  0.017   CD96 antigen isoform 2 precursor 
PPM1B                 0.017   protein phosphatase 1B isoform 3 
PPM1B                 0.017   protein phosphatase 1B isoform 1 
ZC3H18                0.017   zinc finger CCCH-type containing 18 
DKFZp686L13185        0.017   PREDICTED: hypothetical protein LOC401287 
C11orf41              0.017   hypothetical protein LOC25758 
PLA2G2E               0.017   phospholipase A2, group IIE 
PRR11                 0.017   proline rich 11 
CASKIN1               0.013   CASK interacting protein 1 
TTN                   0.013   titin isoform N2-A 
DKFZp686L13185        0.013   PREDICTED: hypothetical protein LOC401287 
DKFZp686L13185        0.013   PREDICTED: hypothetical protein LOC401287 
SOBP                  0.013   sine oculis binding protein homolog 
ZFHX2                 0.013   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.013   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.013   PREDICTED: zinc finger homeobox 2 
LOC100129571          0.009   PREDICTED: similar to hCG1646049 
LOC100129571          0.009   PREDICTED: similar to hCG1646049 
LOC100129571          0.009   PREDICTED: similar to hCG1646049 
PGK2                  0.009   phosphoglycerate kinase 2 
EFS                   0.009   embryonal Fyn-associated substrate isoform 2 
EFS                   0.009   embryonal Fyn-associated substrate isoform 1 
BCL9L                 0.009   B-cell CLL/lymphoma 9-like 
MANEAL                0.009   mannosidase, endo-alpha-like isoform 3 
MANEAL                0.009   mannosidase, endo-alpha-like isoform 1 
RBL2                  0.009   retinoblastoma-like 2 (p130) 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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