Guide to the Human Genome
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Name: C17orf66 Sequence: fasta or formatted (570aa) NCBI GI: 76253680
Description:

hypothetical protein LOC256957

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         40           2
 C cysteine            2.5         14           2
 D aspartate           3.3         19           2
 E glutamate           8.2         47           2
 F phenylalanine       2.8         16           1
 G glycine             2.6         15           1
 H histidine           2.5         14           1
 I isoleucine          4.4         25           1
 K lysine              9.5         54           2
 L leucine            12.3         70           3
 M methionine          3.5         20           2
 N asparagine          2.6         15           1
 P proline             6.7         38           2
 Q glutamine           6.7         38           2
 R arginine            6.0         34           2
 S serine              5.6         32           3
 T threonine           4.7         27           1
 V valine              5.6         32           1
 W tryptophan          1.2          7           1
 Y tyrosine            2.3         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC256957 
HEATR4                0.011   HEAT repeat containing 4 
MTOR                  0.009   FK506 binding protein 12-rapamycin associated protein...
HEATR7A               0.007   HEAT repeat containing 7A isoform 1 
RNF219                0.007   ring finger protein 219 
CCDC89                0.006   coiled-coil domain containing 89 
COPA                  0.006   coatomer protein complex, subunit alpha isoform 2 [...
LOC730658             0.005   PREDICTED: similar to UPF0634 protein KIAA1641 [Hom...
ANKRD36               0.005   PREDICTED: ankyrin repeat domain 36 
ARHGAP4               0.005   Rho GTPase activating protein 4 
ANKRD36B              0.005   ankyrin repeat domain 36B 
TEX13A                0.005   testis expressed sequence 13A 
ITPR3                 0.005   inositol 1,4,5-triphosphate receptor, type 3 
STAG3                 0.005   stromal antigen 3 
RBM25                 0.004   RNA binding motif protein 25 
ABAT                  0.004   4-aminobutyrate aminotransferase precursor 
ABAT                  0.004   4-aminobutyrate aminotransferase precursor 
ABAT                  0.004   4-aminobutyrate aminotransferase precursor 
FAM75A4               0.004   PREDICTED: family with sequence similarity 75, memb...
FAM75A4               0.004   PREDICTED: family with sequence similarity 75, memb...
SWAP70                0.004   SWAP-70 protein 
LOC100289067          0.004   PREDICTED: hypothetical protein XP_002342619 
PKD1L2                0.004   polycystin 1-like 2 isoform a 
MAPKBP1               0.004   mitogen-activated protein kinase binding protein 1 ...
MAPKBP1               0.004   mitogen-activated protein kinase binding protein 1 ...
TTC12                 0.004   tetratricopeptide repeat domain 12 
ADCY5                 0.004   adenylate cyclase 5 
COPA                  0.004   coatomer protein complex, subunit alpha isoform 1 [...
TEX14                 0.004   testis expressed sequence 14 isoform a 
TEX14                 0.004   testis expressed sequence 14 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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