BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|74048537 praja 1 isoform b [Homo sapiens] (588 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|74048537 praja 1 isoform b [Homo sapiens] 1213 0.0 gi|41281725 praja 1 isoform a [Homo sapiens] 1213 0.0 gi|21539663 praja 1 isoform c [Homo sapiens] 746 0.0 gi|157412255 praja 2, RING-H2 motif containing [Homo sapiens] 477 e-134 gi|37622894 ring finger protein 126 [Homo sapiens] 82 1e-15 gi|33859668 Rabring 7 [Homo sapiens] 77 6e-14 gi|7706039 ring finger protein 181 [Homo sapiens] 72 1e-12 gi|5174653 ring finger protein 6 [Homo sapiens] 59 2e-08 gi|34305295 ring finger protein 6 [Homo sapiens] 59 2e-08 gi|34305293 ring finger protein 6 [Homo sapiens] 59 2e-08 gi|34452686 ring finger protein, LIM domain interacting [Homo sa... 56 1e-07 gi|34452684 ring finger protein, LIM domain interacting [Homo sa... 56 1e-07 gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo ... 55 2e-07 gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo ... 55 2e-07 gi|21040269 ring finger protein 133 [Homo sapiens] 55 2e-07 gi|7662486 ring finger protein 44 [Homo sapiens] 55 2e-07 gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens] 54 4e-07 gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens] 54 4e-07 gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens] 54 4e-07 gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens] 54 4e-07 gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens] 54 4e-07 gi|29788758 ring finger protein 130 [Homo sapiens] 53 7e-07 gi|150378447 zinc and ring finger 3 [Homo sapiens] 53 9e-07 gi|37675277 ring finger protein 148 [Homo sapiens] 52 1e-06 gi|27436927 synoviolin 1 isoform b [Homo sapiens] 52 2e-06 gi|27436925 synoviolin 1 isoform a [Homo sapiens] 52 2e-06 gi|14149702 ring finger protein 167 [Homo sapiens] 52 2e-06 gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens] 51 3e-06 gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens] 51 3e-06 gi|58331204 ring finger protein 150 [Homo sapiens] 51 3e-06 >gi|74048537 praja 1 isoform b [Homo sapiens] Length = 588 Score = 1213 bits (3139), Expect = 0.0 Identities = 588/588 (100%), Positives = 588/588 (100%) Query: 1 MHRSAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRYPPREYRASGSRRGMAY 60 MHRSAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRYPPREYRASGSRRGMAY Sbjct: 1 MHRSAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRYPPREYRASGSRRGMAY 60 Query: 61 GHIDSYGADDSEEEGAGPVERPPVRGKTGKFKDDKLYDPEKGARSLAGPPPHFSSFSRDV 120 GHIDSYGADDSEEEGAGPVERPPVRGKTGKFKDDKLYDPEKGARSLAGPPPHFSSFSRDV Sbjct: 61 GHIDSYGADDSEEEGAGPVERPPVRGKTGKFKDDKLYDPEKGARSLAGPPPHFSSFSRDV 120 Query: 121 REERDKLDPVPAARCSASRADFLPQSSVASQSSSEGKLATKGDSSERERREQNLPARPSR 180 REERDKLDPVPAARCSASRADFLPQSSVASQSSSEGKLATKGDSSERERREQNLPARPSR Sbjct: 121 REERDKLDPVPAARCSASRADFLPQSSVASQSSSEGKLATKGDSSERERREQNLPARPSR 180 Query: 181 APVSICGGGENTSKSAEEPVVRPKIRNLASPNCVKPKIFFDTDDDDDMPHSTSRWRDTAN 240 APVSICGGGENTSKSAEEPVVRPKIRNLASPNCVKPKIFFDTDDDDDMPHSTSRWRDTAN Sbjct: 181 APVSICGGGENTSKSAEEPVVRPKIRNLASPNCVKPKIFFDTDDDDDMPHSTSRWRDTAN 240 Query: 241 DNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVPRRRRTMADPDFWTHSD 300 DNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVPRRRRTMADPDFWTHSD Sbjct: 241 DNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVPRRRRTMADPDFWTHSD 300 Query: 301 DYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSASTGT 360 DYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSASTGT Sbjct: 301 DYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSASTGT 360 Query: 361 SPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDSSSEG 420 SPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDSSSEG Sbjct: 361 SPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDSSSEG 420 Query: 421 DNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFADGLGVAEAISYVDPQFL 480 DNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFADGLGVAEAISYVDPQFL Sbjct: 421 DNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFADGLGVAEAISYVDPQFL 480 Query: 481 TYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCC 540 TYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCC Sbjct: 481 TYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCC 540 Query: 541 PICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPPPL 588 PICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPPPL Sbjct: 541 PICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPPPL 588 >gi|41281725 praja 1 isoform a [Homo sapiens] Length = 643 Score = 1213 bits (3139), Expect = 0.0 Identities = 588/588 (100%), Positives = 588/588 (100%) Query: 1 MHRSAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRYPPREYRASGSRRGMAY 60 MHRSAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRYPPREYRASGSRRGMAY Sbjct: 56 MHRSAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRYPPREYRASGSRRGMAY 115 Query: 61 GHIDSYGADDSEEEGAGPVERPPVRGKTGKFKDDKLYDPEKGARSLAGPPPHFSSFSRDV 120 GHIDSYGADDSEEEGAGPVERPPVRGKTGKFKDDKLYDPEKGARSLAGPPPHFSSFSRDV Sbjct: 116 GHIDSYGADDSEEEGAGPVERPPVRGKTGKFKDDKLYDPEKGARSLAGPPPHFSSFSRDV 175 Query: 121 REERDKLDPVPAARCSASRADFLPQSSVASQSSSEGKLATKGDSSERERREQNLPARPSR 180 REERDKLDPVPAARCSASRADFLPQSSVASQSSSEGKLATKGDSSERERREQNLPARPSR Sbjct: 176 REERDKLDPVPAARCSASRADFLPQSSVASQSSSEGKLATKGDSSERERREQNLPARPSR 235 Query: 181 APVSICGGGENTSKSAEEPVVRPKIRNLASPNCVKPKIFFDTDDDDDMPHSTSRWRDTAN 240 APVSICGGGENTSKSAEEPVVRPKIRNLASPNCVKPKIFFDTDDDDDMPHSTSRWRDTAN Sbjct: 236 APVSICGGGENTSKSAEEPVVRPKIRNLASPNCVKPKIFFDTDDDDDMPHSTSRWRDTAN 295 Query: 241 DNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVPRRRRTMADPDFWTHSD 300 DNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVPRRRRTMADPDFWTHSD Sbjct: 296 DNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVPRRRRTMADPDFWTHSD 355 Query: 301 DYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSASTGT 360 DYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSASTGT Sbjct: 356 DYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSASTGT 415 Query: 361 SPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDSSSEG 420 SPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDSSSEG Sbjct: 416 SPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDSSSEG 475 Query: 421 DNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFADGLGVAEAISYVDPQFL 480 DNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFADGLGVAEAISYVDPQFL Sbjct: 476 DNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFADGLGVAEAISYVDPQFL 535 Query: 481 TYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCC 540 TYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCC Sbjct: 536 TYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCC 595 Query: 541 PICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPPPL 588 PICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPPPL Sbjct: 596 PICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPPPL 643 >gi|21539663 praja 1 isoform c [Homo sapiens] Length = 455 Score = 746 bits (1926), Expect = 0.0 Identities = 359/364 (98%), Positives = 361/364 (99%) Query: 225 DDDMPHSTSRWRDTANDNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVP 284 D++ STSRWRDTANDNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVP Sbjct: 92 DNEDYSSTSRWRDTANDNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVP 151 Query: 285 RRRRTMADPDFWTHSDDYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGK 344 RRRRTMADPDFWTHSDDYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGK Sbjct: 152 RRRRTMADPDFWTHSDDYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGK 211 Query: 345 EEREPPQAKVSASTGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEG 404 EEREPPQAKVSASTGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEG Sbjct: 212 EEREPPQAKVSASTGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEG 271 Query: 405 EIPWLQYHENDSSSEGDNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFAD 464 EIPWLQYHENDSSSEGDNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFAD Sbjct: 272 EIPWLQYHENDSSSEGDNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFAD 331 Query: 465 GLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPE 524 GLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPE Sbjct: 332 GLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPE 391 Query: 525 ILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMF 584 ILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMF Sbjct: 392 ILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMF 451 Query: 585 PPPL 588 PPPL Sbjct: 452 PPPL 455 Score = 92.8 bits (229), Expect = 8e-19 Identities = 73/196 (37%), Positives = 92/196 (46%), Gaps = 12/196 (6%) Query: 1 MHRSAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRYPPREYRASGSRRGMAY 60 MHRSAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYS A+ + Sbjct: 56 MHRSAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSSTSRWRDTANDNE----- 110 Query: 61 GHIDSYGADDSEEEGAGPVERPPVRGKTGKFKDDKLYDPEKGARSLAGPPPHFSSFSRDV 120 GH D E +G E P + + D++ + R P F + S D Sbjct: 111 GHSDGLARRGRGESSSGYPE-PKYPEDKREARSDQVKPEKVPRRRRTMADPDFWTHSDDY 169 Query: 121 REERDKLDPVPAARCSASRADFLPQSSVASQSSSEGKLATKGDSSERERREQNLPARPSR 180 + D+ +A R + +S + SSS T ERE + + A Sbjct: 170 YKYCDEDSDSDKEWIAALRRKY--RSREQTLSSSGESWETLPGKEEREPPQAKVSASTGT 227 Query: 181 APVSICGGGENTSKSA 196 +P G G + S A Sbjct: 228 SP----GPGASASAGA 239 >gi|157412255 praja 2, RING-H2 motif containing [Homo sapiens] Length = 708 Score = 477 bits (1228), Expect = e-134 Identities = 283/605 (46%), Positives = 363/605 (60%), Gaps = 53/605 (8%) Query: 4 SAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRYPPREYRASGSRRGMAYGHI 63 SA +QTT+ S+S F S + ++ G++ N+ N Y P AS + G+A H Sbjct: 107 SALNQTTESSQS-FVAVHHSEEGRDTLGSSTNLHNHSEGEYIPGACSASSVQNGIALVHT 165 Query: 64 DSYGADDSEEEGAGPVERPPVRGKTGKFKD---DKLYDPE-KGARSLAGPPPHFSSFSRD 119 DSY D E ++ + ++++ + +++ E + A + G P SF+ + Sbjct: 166 DSYDPDGKHGEDNDHLQLSAEVVEGSRYQESLGNTVFELENREAEAYTGLSPPVPSFNCE 225 Query: 120 VREERDKLDPVPAARCSASRADFLPQSSVASQSSSEGKLAT--KGDSSERERREQNLPAR 177 VR+E ++LD VP + SA +F+ Q+S Q SS+ ++ + + +++ +ER+ ++ P Sbjct: 226 VRDEFEELDSVPLVKSSAGDTEFVHQNSQEIQRSSQDEMVSTKQQNNTSQERQTEHSPED 285 Query: 178 PSRAPVSICG-----GGENTSKSAEEPVVRPKIRNLASPNCVKPKIFFDTDDDDDMPHST 232 + P IC E S+ E VVRPK+R L S + V + F+ + S Sbjct: 286 AACGPGHICSEQNTNDREKNHGSSPEQVVRPKVRKLISSSQVDQETGFNRHEAKQ--RSV 343 Query: 233 SRWRDTANDNEGHSDGLARRGR---GESSSGYPEPKYPE--DKREARSDQVKPEKVPRRR 287 RWR+ E SD L + GE + +P Y +RE ++Q+ E Sbjct: 344 QRWREALEVEESGSDDLLIKCEEYDGEHDCMFLDPPYSRVITQRETENNQMTSESGATAG 403 Query: 288 RTMADPDFWTHSDDYYKYCDEDSDS----DKEWIAALRRKYRSREQTLSSSGESWETLPG 343 R D FW DYY+ D+D DS D EW A+L ++ E+ SSS ESWETLPG Sbjct: 404 RQEVDNTFWNGCGDYYQLYDKDEDSSECSDGEWSASLPHRFSGTEKDQSSSDESWETLPG 463 Query: 344 KEEREPPQAKVSASTGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQE-EQASLE 402 K+E EP S+ S EE +E SLQE EQ SLE Sbjct: 464 KDENEP---------------------------ELQSDSSGPEEENQELSLQEGEQTSLE 496 Query: 403 EGEIPWLQYHE-NDSSSEGDNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDG 461 EGEIPWLQY+E N+SSS+ N+ +E QP FMLDGNNNLEDDSSVSEDL+VDWSLFDG Sbjct: 497 EGEIPWLQYNEVNESSSDEGNEPANEFAQPA-FMLDGNNNLEDDSSVSEDLDVDWSLFDG 555 Query: 462 FADGLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDA 521 FADGLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESID Sbjct: 556 FADGLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDG 615 Query: 522 LPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 581 LPE LV EDH A+GQE CCPICCSEY+K ++ATELPCHH+FHKPCVSIWLQKSGTCPVCR Sbjct: 616 LPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCR 675 Query: 582 CMFPP 586 FPP Sbjct: 676 RHFPP 680 >gi|37622894 ring finger protein 126 [Homo sapiens] Length = 311 Score = 82.0 bits (201), Expect = 1e-15 Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 2/70 (2%) Query: 512 PPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWL 571 PPA KE I ALP + VTE+H VG + CP+C +Y GE +LPC+H FH C+ WL Sbjct: 203 PPADKEKIQALPTVPVTEEH--VGSGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWL 260 Query: 572 QKSGTCPVCR 581 ++ +CPVCR Sbjct: 261 EQHDSCPVCR 270 >gi|33859668 Rabring 7 [Homo sapiens] Length = 304 Score = 76.6 bits (187), Expect = 6e-14 Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 2/70 (2%) Query: 512 PPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWL 571 PPA KE I +LP + VT++ +G E CP+C +Y E +LPC+H+FH C+ WL Sbjct: 202 PPADKEKITSLPTVTVTQEQVDMGLE--CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWL 259 Query: 572 QKSGTCPVCR 581 + TCPVCR Sbjct: 260 ELHDTCPVCR 269 >gi|7706039 ring finger protein 181 [Homo sapiens] Length = 153 Score = 72.4 bits (176), Expect = 1e-12 Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 4/74 (5%) Query: 512 PPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWL 571 PPA+K ++ LP ++ E+ CP+C E+ + E A E+PCHH FH C+ WL Sbjct: 52 PPAAKTVVENLPRTVIRGSQA----ELKCPVCLLEFEEEETAIEMPCHHLFHSSCILPWL 107 Query: 572 QKSGTCPVCRCMFP 585 K+ +CP+CR P Sbjct: 108 SKTNSCPLCRYELP 121 >gi|5174653 ring finger protein 6 [Homo sapiens] Length = 685 Score = 58.5 bits (140), Expect = 2e-08 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 4/69 (5%) Query: 515 SKESIDALPEILVTEDHGAVGQEM--CCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQ 572 +KE ID L +H ++ E+ C +C S+YV G +LPC H FH C+ WL Sbjct: 607 TKEQIDNLSTRHY--EHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLS 664 Query: 573 KSGTCPVCR 581 ++ TCP+CR Sbjct: 665 ENCTCPICR 673 >gi|34305295 ring finger protein 6 [Homo sapiens] Length = 685 Score = 58.5 bits (140), Expect = 2e-08 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 4/69 (5%) Query: 515 SKESIDALPEILVTEDHGAVGQEM--CCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQ 572 +KE ID L +H ++ E+ C +C S+YV G +LPC H FH C+ WL Sbjct: 607 TKEQIDNLSTRHY--EHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLS 664 Query: 573 KSGTCPVCR 581 ++ TCP+CR Sbjct: 665 ENCTCPICR 673 >gi|34305293 ring finger protein 6 [Homo sapiens] Length = 685 Score = 58.5 bits (140), Expect = 2e-08 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 4/69 (5%) Query: 515 SKESIDALPEILVTEDHGAVGQEM--CCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQ 572 +KE ID L +H ++ E+ C +C S+YV G +LPC H FH C+ WL Sbjct: 607 TKEQIDNLSTRHY--EHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLS 664 Query: 573 KSGTCPVCR 581 ++ TCP+CR Sbjct: 665 ENCTCPICR 673 >gi|34452686 ring finger protein, LIM domain interacting [Homo sapiens] Length = 624 Score = 55.8 bits (133), Expect = 1e-07 Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 4/67 (5%) Query: 515 SKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKS 574 +KE ID L G C +C +EY +G +LPC H +H C+ WL ++ Sbjct: 549 TKEQIDNL----AMRSFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSEN 604 Query: 575 GTCPVCR 581 TCP+CR Sbjct: 605 STCPICR 611 Score = 32.7 bits (73), Expect = 0.96 Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 6/150 (4%) Query: 302 YYKYCDEDSD-----SDKEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSA 356 Y+ Y D DS+ S++ A R R SSSG S + + S Sbjct: 418 YFMYSDSDSEPTGSVSNRNMERAESRSGRGGSGGGSSSGSSSSSSSSSSSSSSSSSSSSP 477 Query: 357 STGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDS 416 S+ +S G + S+ G++ GS+ S RE + E G +P+L + Sbjct: 478 SS-SSGGESSETSSDLFEGSNEGSSSSGSSGARREGRHRAPVTFDESGSLPFLSLAQFFL 536 Query: 417 SSEGDNDSGHELMQPGVFMLDGNNNLEDDS 446 +E D+D L + + L + E+D+ Sbjct: 537 LNEDDDDQPRGLTKEQIDNLAMRSFGENDA 566 >gi|34452684 ring finger protein, LIM domain interacting [Homo sapiens] Length = 624 Score = 55.8 bits (133), Expect = 1e-07 Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 4/67 (5%) Query: 515 SKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKS 574 +KE ID L G C +C +EY +G +LPC H +H C+ WL ++ Sbjct: 549 TKEQIDNL----AMRSFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSEN 604 Query: 575 GTCPVCR 581 TCP+CR Sbjct: 605 STCPICR 611 Score = 32.7 bits (73), Expect = 0.96 Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 6/150 (4%) Query: 302 YYKYCDEDSD-----SDKEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSA 356 Y+ Y D DS+ S++ A R R SSSG S + + S Sbjct: 418 YFMYSDSDSEPTGSVSNRNMERAESRSGRGGSGGGSSSGSSSSSSSSSSSSSSSSSSSSP 477 Query: 357 STGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDS 416 S+ +S G + S+ G++ GS+ S RE + E G +P+L + Sbjct: 478 SS-SSGGESSETSSDLFEGSNEGSSSSGSSGARREGRHRAPVTFDESGSLPFLSLAQFFL 536 Query: 417 SSEGDNDSGHELMQPGVFMLDGNNNLEDDS 446 +E D+D L + + L + E+D+ Sbjct: 537 LNEDDDDQPRGLTKEQIDNLAMRSFGENDA 566 >gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo sapiens] Length = 183 Score = 55.1 bits (131), Expect = 2e-07 Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 519 IDALPEILVTEDHGAVGQEMC-CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTC 577 + LPE + +EM C IC E+V G+ LPC H+FH C+ WL +S TC Sbjct: 66 LQCLPEEVYDPGRDKSEEEMPECVICLLEFVCGDPIRCLPCKHFFHLDCIDTWLLRSFTC 125 Query: 578 PVCR 581 P CR Sbjct: 126 PYCR 129 >gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo sapiens] Length = 183 Score = 55.1 bits (131), Expect = 2e-07 Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 519 IDALPEILVTEDHGAVGQEMC-CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTC 577 + LPE + +EM C IC E+V G+ LPC H+FH C+ WL +S TC Sbjct: 66 LQCLPEEVYDPGRDKSEEEMPECVICLLEFVCGDPIRCLPCKHFFHLDCIDTWLLRSFTC 125 Query: 578 PVCR 581 P CR Sbjct: 126 PYCR 129 >gi|21040269 ring finger protein 133 [Homo sapiens] Length = 376 Score = 54.7 bits (130), Expect = 2e-07 Identities = 18/43 (41%), Positives = 25/43 (58%) Query: 540 CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRC 582 C IC Y ++ L C H+FHK C+ W+ GTCP+C+C Sbjct: 256 CVICFERYKPNDIVRILTCKHFFHKNCIDPWILPHGTCPICKC 298 >gi|7662486 ring finger protein 44 [Homo sapiens] Length = 432 Score = 54.7 bits (130), Expect = 2e-07 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 515 SKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKS 574 +K I+ LP D Q +C +C S++ ++ LPC+H FH CV WL+ + Sbjct: 356 TKADIEQLPSYRFNPDSHQSEQTLCV-VCFSDFEARQLLRVLPCNHEFHTKCVDKWLKAN 414 Query: 575 GTCPVCR 581 TCP+CR Sbjct: 415 RTCPICR 421 >gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens] Length = 432 Score = 53.9 bits (128), Expect = 4e-07 Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%) Query: 475 VDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAV 534 V P F + +E+ + E L E L E +K I+ LP ++ Sbjct: 319 VGPTFSFELDVEDGEVENYEALLNLAERLG---EAKPRGLTKADIEQLPSYRFNPNNHQS 375 Query: 535 GQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 581 Q +C +C ++ ++ LPC+H FH CV WL+ + TCP+CR Sbjct: 376 EQTLCV-VCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421 >gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens] Length = 432 Score = 53.9 bits (128), Expect = 4e-07 Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%) Query: 475 VDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAV 534 V P F + +E+ + E L E L E +K I+ LP ++ Sbjct: 319 VGPTFSFELDVEDGEVENYEALLNLAERLG---EAKPRGLTKADIEQLPSYRFNPNNHQS 375 Query: 535 GQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 581 Q +C +C ++ ++ LPC+H FH CV WL+ + TCP+CR Sbjct: 376 EQTLCV-VCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421 >gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens] Length = 465 Score = 53.9 bits (128), Expect = 4e-07 Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%) Query: 475 VDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAV 534 V P F + +E+ + E L E L E +K I+ LP ++ Sbjct: 352 VGPTFSFELDVEDGEVENYEALLNLAERLG---EAKPRGLTKADIEQLPSYRFNPNNHQS 408 Query: 535 GQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 581 Q +C +C ++ ++ LPC+H FH CV WL+ + TCP+CR Sbjct: 409 EQTLCV-VCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 454 >gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens] Length = 432 Score = 53.9 bits (128), Expect = 4e-07 Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%) Query: 475 VDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAV 534 V P F + +E+ + E L E L E +K I+ LP ++ Sbjct: 319 VGPTFSFELDVEDGEVENYEALLNLAERLG---EAKPRGLTKADIEQLPSYRFNPNNHQS 375 Query: 535 GQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 581 Q +C +C ++ ++ LPC+H FH CV WL+ + TCP+CR Sbjct: 376 EQTLCV-VCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421 >gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens] Length = 515 Score = 53.9 bits (128), Expect = 4e-07 Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%) Query: 475 VDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAV 534 V P F + +E+ + E L E L E +K I+ LP ++ Sbjct: 402 VGPTFSFELDVEDGEVENYEALLNLAERLG---EAKPRGLTKADIEQLPSYRFNPNNHQS 458 Query: 535 GQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 581 Q +C +C ++ ++ LPC+H FH CV WL+ + TCP+CR Sbjct: 459 EQTLCV-VCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 504 >gi|29788758 ring finger protein 130 [Homo sapiens] Length = 419 Score = 53.1 bits (126), Expect = 7e-07 Identities = 19/42 (45%), Positives = 25/42 (59%) Query: 540 CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 581 C +C Y + +V LPC H FHK CV WL + TCP+C+ Sbjct: 264 CAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCK 305 >gi|150378447 zinc and ring finger 3 [Homo sapiens] Length = 836 Score = 52.8 bits (125), Expect = 9e-07 Identities = 20/42 (47%), Positives = 25/42 (59%) Query: 540 CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 581 C IC +Y+ GE +PC H FH+ CV WL + TCP CR Sbjct: 193 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCR 234 >gi|37675277 ring finger protein 148 [Homo sapiens] Length = 305 Score = 52.4 bits (124), Expect = 1e-06 Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 516 KESIDALP-EILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKS 574 K++ID L +L D E C +C Y +V L C H+FHK C+ WL Sbjct: 233 KKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAH 292 Query: 575 GTCPVCRC 582 TCP+C+C Sbjct: 293 RTCPMCKC 300 >gi|27436927 synoviolin 1 isoform b [Homo sapiens] Length = 617 Score = 52.0 bits (123), Expect = 2e-06 Identities = 27/62 (43%), Positives = 31/62 (50%), Gaps = 9/62 (14%) Query: 520 DALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPV 579 DA PE L D+ C IC E V G A LPC+H FH C+ W Q+ TCP Sbjct: 278 DATPEELQAMDN-------VCIICREEMVTG--AKRLPCNHIFHTSCLRSWFQRQQTCPT 328 Query: 580 CR 581 CR Sbjct: 329 CR 330 >gi|27436925 synoviolin 1 isoform a [Homo sapiens] Length = 616 Score = 52.0 bits (123), Expect = 2e-06 Identities = 27/62 (43%), Positives = 31/62 (50%), Gaps = 9/62 (14%) Query: 520 DALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPV 579 DA PE L D+ C IC E V G A LPC+H FH C+ W Q+ TCP Sbjct: 278 DATPEELQAMDN-------VCIICREEMVTG--AKRLPCNHIFHTSCLRSWFQRQQTCPT 328 Query: 580 CR 581 CR Sbjct: 329 CR 330 >gi|14149702 ring finger protein 167 [Homo sapiens] Length = 350 Score = 52.0 bits (123), Expect = 2e-06 Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 5/68 (7%) Query: 515 SKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWL-QK 573 +KE + +P T D+ Q C IC EY G+ LPC H +H CV WL Q Sbjct: 209 TKEQLKQIP----THDYQKGDQYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQT 264 Query: 574 SGTCPVCR 581 TCP+C+ Sbjct: 265 RKTCPICK 272 >gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens] Length = 428 Score = 50.8 bits (120), Expect = 3e-06 Identities = 18/43 (41%), Positives = 25/43 (58%) Query: 540 CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRC 582 C +C Y ++ L C+H FHK CV WL + TCP+C+C Sbjct: 277 CAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKC 319 >gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens] Length = 402 Score = 50.8 bits (120), Expect = 3e-06 Identities = 18/43 (41%), Positives = 25/43 (58%) Query: 540 CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRC 582 C +C Y ++ L C+H FHK CV WL + TCP+C+C Sbjct: 251 CAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKC 293 >gi|58331204 ring finger protein 150 [Homo sapiens] Length = 438 Score = 50.8 bits (120), Expect = 3e-06 Identities = 19/42 (45%), Positives = 23/42 (54%) Query: 540 CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 581 C +C Y +V LPC H FHK CV WL TCP+C+ Sbjct: 278 CAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCK 319 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.310 0.128 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,735,175 Number of Sequences: 37866 Number of extensions: 1465322 Number of successful extensions: 8552 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 118 Number of HSP's successfully gapped in prelim test: 311 Number of HSP's that attempted gapping in prelim test: 7733 Number of HSP's gapped (non-prelim): 957 length of query: 588 length of database: 18,247,518 effective HSP length: 108 effective length of query: 480 effective length of database: 14,157,990 effective search space: 6795835200 effective search space used: 6795835200 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.