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Search of human proteins with 74048537
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|74048537 praja 1 isoform b [Homo sapiens]
(588 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|74048537 praja 1 isoform b [Homo sapiens] 1213 0.0
gi|41281725 praja 1 isoform a [Homo sapiens] 1213 0.0
gi|21539663 praja 1 isoform c [Homo sapiens] 746 0.0
gi|157412255 praja 2, RING-H2 motif containing [Homo sapiens] 477 e-134
gi|37622894 ring finger protein 126 [Homo sapiens] 82 1e-15
gi|33859668 Rabring 7 [Homo sapiens] 77 6e-14
gi|7706039 ring finger protein 181 [Homo sapiens] 72 1e-12
gi|5174653 ring finger protein 6 [Homo sapiens] 59 2e-08
gi|34305295 ring finger protein 6 [Homo sapiens] 59 2e-08
gi|34305293 ring finger protein 6 [Homo sapiens] 59 2e-08
gi|34452686 ring finger protein, LIM domain interacting [Homo sa... 56 1e-07
gi|34452684 ring finger protein, LIM domain interacting [Homo sa... 56 1e-07
gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo ... 55 2e-07
gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo ... 55 2e-07
gi|21040269 ring finger protein 133 [Homo sapiens] 55 2e-07
gi|7662486 ring finger protein 44 [Homo sapiens] 55 2e-07
gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens] 54 4e-07
gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens] 54 4e-07
gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens] 54 4e-07
gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens] 54 4e-07
gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens] 54 4e-07
gi|29788758 ring finger protein 130 [Homo sapiens] 53 7e-07
gi|150378447 zinc and ring finger 3 [Homo sapiens] 53 9e-07
gi|37675277 ring finger protein 148 [Homo sapiens] 52 1e-06
gi|27436927 synoviolin 1 isoform b [Homo sapiens] 52 2e-06
gi|27436925 synoviolin 1 isoform a [Homo sapiens] 52 2e-06
gi|14149702 ring finger protein 167 [Homo sapiens] 52 2e-06
gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens] 51 3e-06
gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens] 51 3e-06
gi|58331204 ring finger protein 150 [Homo sapiens] 51 3e-06
>gi|74048537 praja 1 isoform b [Homo sapiens]
Length = 588
Score = 1213 bits (3139), Expect = 0.0
Identities = 588/588 (100%), Positives = 588/588 (100%)
Query: 1 MHRSAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRYPPREYRASGSRRGMAY 60
MHRSAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRYPPREYRASGSRRGMAY
Sbjct: 1 MHRSAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRYPPREYRASGSRRGMAY 60
Query: 61 GHIDSYGADDSEEEGAGPVERPPVRGKTGKFKDDKLYDPEKGARSLAGPPPHFSSFSRDV 120
GHIDSYGADDSEEEGAGPVERPPVRGKTGKFKDDKLYDPEKGARSLAGPPPHFSSFSRDV
Sbjct: 61 GHIDSYGADDSEEEGAGPVERPPVRGKTGKFKDDKLYDPEKGARSLAGPPPHFSSFSRDV 120
Query: 121 REERDKLDPVPAARCSASRADFLPQSSVASQSSSEGKLATKGDSSERERREQNLPARPSR 180
REERDKLDPVPAARCSASRADFLPQSSVASQSSSEGKLATKGDSSERERREQNLPARPSR
Sbjct: 121 REERDKLDPVPAARCSASRADFLPQSSVASQSSSEGKLATKGDSSERERREQNLPARPSR 180
Query: 181 APVSICGGGENTSKSAEEPVVRPKIRNLASPNCVKPKIFFDTDDDDDMPHSTSRWRDTAN 240
APVSICGGGENTSKSAEEPVVRPKIRNLASPNCVKPKIFFDTDDDDDMPHSTSRWRDTAN
Sbjct: 181 APVSICGGGENTSKSAEEPVVRPKIRNLASPNCVKPKIFFDTDDDDDMPHSTSRWRDTAN 240
Query: 241 DNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVPRRRRTMADPDFWTHSD 300
DNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVPRRRRTMADPDFWTHSD
Sbjct: 241 DNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVPRRRRTMADPDFWTHSD 300
Query: 301 DYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSASTGT 360
DYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSASTGT
Sbjct: 301 DYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSASTGT 360
Query: 361 SPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDSSSEG 420
SPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDSSSEG
Sbjct: 361 SPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDSSSEG 420
Query: 421 DNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFADGLGVAEAISYVDPQFL 480
DNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFADGLGVAEAISYVDPQFL
Sbjct: 421 DNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFADGLGVAEAISYVDPQFL 480
Query: 481 TYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCC 540
TYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCC
Sbjct: 481 TYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCC 540
Query: 541 PICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPPPL 588
PICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPPPL
Sbjct: 541 PICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPPPL 588
>gi|41281725 praja 1 isoform a [Homo sapiens]
Length = 643
Score = 1213 bits (3139), Expect = 0.0
Identities = 588/588 (100%), Positives = 588/588 (100%)
Query: 1 MHRSAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRYPPREYRASGSRRGMAY 60
MHRSAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRYPPREYRASGSRRGMAY
Sbjct: 56 MHRSAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRYPPREYRASGSRRGMAY 115
Query: 61 GHIDSYGADDSEEEGAGPVERPPVRGKTGKFKDDKLYDPEKGARSLAGPPPHFSSFSRDV 120
GHIDSYGADDSEEEGAGPVERPPVRGKTGKFKDDKLYDPEKGARSLAGPPPHFSSFSRDV
Sbjct: 116 GHIDSYGADDSEEEGAGPVERPPVRGKTGKFKDDKLYDPEKGARSLAGPPPHFSSFSRDV 175
Query: 121 REERDKLDPVPAARCSASRADFLPQSSVASQSSSEGKLATKGDSSERERREQNLPARPSR 180
REERDKLDPVPAARCSASRADFLPQSSVASQSSSEGKLATKGDSSERERREQNLPARPSR
Sbjct: 176 REERDKLDPVPAARCSASRADFLPQSSVASQSSSEGKLATKGDSSERERREQNLPARPSR 235
Query: 181 APVSICGGGENTSKSAEEPVVRPKIRNLASPNCVKPKIFFDTDDDDDMPHSTSRWRDTAN 240
APVSICGGGENTSKSAEEPVVRPKIRNLASPNCVKPKIFFDTDDDDDMPHSTSRWRDTAN
Sbjct: 236 APVSICGGGENTSKSAEEPVVRPKIRNLASPNCVKPKIFFDTDDDDDMPHSTSRWRDTAN 295
Query: 241 DNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVPRRRRTMADPDFWTHSD 300
DNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVPRRRRTMADPDFWTHSD
Sbjct: 296 DNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVPRRRRTMADPDFWTHSD 355
Query: 301 DYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSASTGT 360
DYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSASTGT
Sbjct: 356 DYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSASTGT 415
Query: 361 SPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDSSSEG 420
SPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDSSSEG
Sbjct: 416 SPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDSSSEG 475
Query: 421 DNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFADGLGVAEAISYVDPQFL 480
DNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFADGLGVAEAISYVDPQFL
Sbjct: 476 DNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFADGLGVAEAISYVDPQFL 535
Query: 481 TYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCC 540
TYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCC
Sbjct: 536 TYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCC 595
Query: 541 PICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPPPL 588
PICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPPPL
Sbjct: 596 PICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPPPL 643
>gi|21539663 praja 1 isoform c [Homo sapiens]
Length = 455
Score = 746 bits (1926), Expect = 0.0
Identities = 359/364 (98%), Positives = 361/364 (99%)
Query: 225 DDDMPHSTSRWRDTANDNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVP 284
D++ STSRWRDTANDNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVP
Sbjct: 92 DNEDYSSTSRWRDTANDNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVP 151
Query: 285 RRRRTMADPDFWTHSDDYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGK 344
RRRRTMADPDFWTHSDDYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGK
Sbjct: 152 RRRRTMADPDFWTHSDDYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGK 211
Query: 345 EEREPPQAKVSASTGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEG 404
EEREPPQAKVSASTGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEG
Sbjct: 212 EEREPPQAKVSASTGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEG 271
Query: 405 EIPWLQYHENDSSSEGDNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFAD 464
EIPWLQYHENDSSSEGDNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFAD
Sbjct: 272 EIPWLQYHENDSSSEGDNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFAD 331
Query: 465 GLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPE 524
GLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPE
Sbjct: 332 GLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPE 391
Query: 525 ILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMF 584
ILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMF
Sbjct: 392 ILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMF 451
Query: 585 PPPL 588
PPPL
Sbjct: 452 PPPL 455
Score = 92.8 bits (229), Expect = 8e-19
Identities = 73/196 (37%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 1 MHRSAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRYPPREYRASGSRRGMAY 60
MHRSAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYS A+ +
Sbjct: 56 MHRSAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSSTSRWRDTANDNE----- 110
Query: 61 GHIDSYGADDSEEEGAGPVERPPVRGKTGKFKDDKLYDPEKGARSLAGPPPHFSSFSRDV 120
GH D E +G E P + + D++ + R P F + S D
Sbjct: 111 GHSDGLARRGRGESSSGYPE-PKYPEDKREARSDQVKPEKVPRRRRTMADPDFWTHSDDY 169
Query: 121 REERDKLDPVPAARCSASRADFLPQSSVASQSSSEGKLATKGDSSERERREQNLPARPSR 180
+ D+ +A R + +S + SSS T ERE + + A
Sbjct: 170 YKYCDEDSDSDKEWIAALRRKY--RSREQTLSSSGESWETLPGKEEREPPQAKVSASTGT 227
Query: 181 APVSICGGGENTSKSA 196
+P G G + S A
Sbjct: 228 SP----GPGASASAGA 239
>gi|157412255 praja 2, RING-H2 motif containing [Homo sapiens]
Length = 708
Score = 477 bits (1228), Expect = e-134
Identities = 283/605 (46%), Positives = 363/605 (60%), Gaps = 53/605 (8%)
Query: 4 SAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRYPPREYRASGSRRGMAYGHI 63
SA +QTT+ S+S F S + ++ G++ N+ N Y P AS + G+A H
Sbjct: 107 SALNQTTESSQS-FVAVHHSEEGRDTLGSSTNLHNHSEGEYIPGACSASSVQNGIALVHT 165
Query: 64 DSYGADDSEEEGAGPVERPPVRGKTGKFKD---DKLYDPE-KGARSLAGPPPHFSSFSRD 119
DSY D E ++ + ++++ + +++ E + A + G P SF+ +
Sbjct: 166 DSYDPDGKHGEDNDHLQLSAEVVEGSRYQESLGNTVFELENREAEAYTGLSPPVPSFNCE 225
Query: 120 VREERDKLDPVPAARCSASRADFLPQSSVASQSSSEGKLAT--KGDSSERERREQNLPAR 177
VR+E ++LD VP + SA +F+ Q+S Q SS+ ++ + + +++ +ER+ ++ P
Sbjct: 226 VRDEFEELDSVPLVKSSAGDTEFVHQNSQEIQRSSQDEMVSTKQQNNTSQERQTEHSPED 285
Query: 178 PSRAPVSICG-----GGENTSKSAEEPVVRPKIRNLASPNCVKPKIFFDTDDDDDMPHST 232
+ P IC E S+ E VVRPK+R L S + V + F+ + S
Sbjct: 286 AACGPGHICSEQNTNDREKNHGSSPEQVVRPKVRKLISSSQVDQETGFNRHEAKQ--RSV 343
Query: 233 SRWRDTANDNEGHSDGLARRGR---GESSSGYPEPKYPE--DKREARSDQVKPEKVPRRR 287
RWR+ E SD L + GE + +P Y +RE ++Q+ E
Sbjct: 344 QRWREALEVEESGSDDLLIKCEEYDGEHDCMFLDPPYSRVITQRETENNQMTSESGATAG 403
Query: 288 RTMADPDFWTHSDDYYKYCDEDSDS----DKEWIAALRRKYRSREQTLSSSGESWETLPG 343
R D FW DYY+ D+D DS D EW A+L ++ E+ SSS ESWETLPG
Sbjct: 404 RQEVDNTFWNGCGDYYQLYDKDEDSSECSDGEWSASLPHRFSGTEKDQSSSDESWETLPG 463
Query: 344 KEEREPPQAKVSASTGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQE-EQASLE 402
K+E EP S+ S EE +E SLQE EQ SLE
Sbjct: 464 KDENEP---------------------------ELQSDSSGPEEENQELSLQEGEQTSLE 496
Query: 403 EGEIPWLQYHE-NDSSSEGDNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDG 461
EGEIPWLQY+E N+SSS+ N+ +E QP FMLDGNNNLEDDSSVSEDL+VDWSLFDG
Sbjct: 497 EGEIPWLQYNEVNESSSDEGNEPANEFAQPA-FMLDGNNNLEDDSSVSEDLDVDWSLFDG 555
Query: 462 FADGLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDA 521
FADGLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESID
Sbjct: 556 FADGLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDG 615
Query: 522 LPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 581
LPE LV EDH A+GQE CCPICCSEY+K ++ATELPCHH+FHKPCVSIWLQKSGTCPVCR
Sbjct: 616 LPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCR 675
Query: 582 CMFPP 586
FPP
Sbjct: 676 RHFPP 680
>gi|37622894 ring finger protein 126 [Homo sapiens]
Length = 311
Score = 82.0 bits (201), Expect = 1e-15
Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 512 PPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWL 571
PPA KE I ALP + VTE+H VG + CP+C +Y GE +LPC+H FH C+ WL
Sbjct: 203 PPADKEKIQALPTVPVTEEH--VGSGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWL 260
Query: 572 QKSGTCPVCR 581
++ +CPVCR
Sbjct: 261 EQHDSCPVCR 270
>gi|33859668 Rabring 7 [Homo sapiens]
Length = 304
Score = 76.6 bits (187), Expect = 6e-14
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 512 PPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWL 571
PPA KE I +LP + VT++ +G E CP+C +Y E +LPC+H+FH C+ WL
Sbjct: 202 PPADKEKITSLPTVTVTQEQVDMGLE--CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWL 259
Query: 572 QKSGTCPVCR 581
+ TCPVCR
Sbjct: 260 ELHDTCPVCR 269
>gi|7706039 ring finger protein 181 [Homo sapiens]
Length = 153
Score = 72.4 bits (176), Expect = 1e-12
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 512 PPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWL 571
PPA+K ++ LP ++ E+ CP+C E+ + E A E+PCHH FH C+ WL
Sbjct: 52 PPAAKTVVENLPRTVIRGSQA----ELKCPVCLLEFEEEETAIEMPCHHLFHSSCILPWL 107
Query: 572 QKSGTCPVCRCMFP 585
K+ +CP+CR P
Sbjct: 108 SKTNSCPLCRYELP 121
>gi|5174653 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 58.5 bits (140), Expect = 2e-08
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 515 SKESIDALPEILVTEDHGAVGQEM--CCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQ 572
+KE ID L +H ++ E+ C +C S+YV G +LPC H FH C+ WL
Sbjct: 607 TKEQIDNLSTRHY--EHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLS 664
Query: 573 KSGTCPVCR 581
++ TCP+CR
Sbjct: 665 ENCTCPICR 673
>gi|34305295 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 58.5 bits (140), Expect = 2e-08
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 515 SKESIDALPEILVTEDHGAVGQEM--CCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQ 572
+KE ID L +H ++ E+ C +C S+YV G +LPC H FH C+ WL
Sbjct: 607 TKEQIDNLSTRHY--EHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLS 664
Query: 573 KSGTCPVCR 581
++ TCP+CR
Sbjct: 665 ENCTCPICR 673
>gi|34305293 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 58.5 bits (140), Expect = 2e-08
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 515 SKESIDALPEILVTEDHGAVGQEM--CCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQ 572
+KE ID L +H ++ E+ C +C S+YV G +LPC H FH C+ WL
Sbjct: 607 TKEQIDNLSTRHY--EHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLS 664
Query: 573 KSGTCPVCR 581
++ TCP+CR
Sbjct: 665 ENCTCPICR 673
>gi|34452686 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 55.8 bits (133), Expect = 1e-07
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 515 SKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKS 574
+KE ID L G C +C +EY +G +LPC H +H C+ WL ++
Sbjct: 549 TKEQIDNL----AMRSFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSEN 604
Query: 575 GTCPVCR 581
TCP+CR
Sbjct: 605 STCPICR 611
Score = 32.7 bits (73), Expect = 0.96
Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 6/150 (4%)
Query: 302 YYKYCDEDSD-----SDKEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSA 356
Y+ Y D DS+ S++ A R R SSSG S + + S
Sbjct: 418 YFMYSDSDSEPTGSVSNRNMERAESRSGRGGSGGGSSSGSSSSSSSSSSSSSSSSSSSSP 477
Query: 357 STGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDS 416
S+ +S G + S+ G++ GS+ S RE + E G +P+L +
Sbjct: 478 SS-SSGGESSETSSDLFEGSNEGSSSSGSSGARREGRHRAPVTFDESGSLPFLSLAQFFL 536
Query: 417 SSEGDNDSGHELMQPGVFMLDGNNNLEDDS 446
+E D+D L + + L + E+D+
Sbjct: 537 LNEDDDDQPRGLTKEQIDNLAMRSFGENDA 566
>gi|34452684 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 55.8 bits (133), Expect = 1e-07
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 515 SKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKS 574
+KE ID L G C +C +EY +G +LPC H +H C+ WL ++
Sbjct: 549 TKEQIDNL----AMRSFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSEN 604
Query: 575 GTCPVCR 581
TCP+CR
Sbjct: 605 STCPICR 611
Score = 32.7 bits (73), Expect = 0.96
Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 6/150 (4%)
Query: 302 YYKYCDEDSD-----SDKEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSA 356
Y+ Y D DS+ S++ A R R SSSG S + + S
Sbjct: 418 YFMYSDSDSEPTGSVSNRNMERAESRSGRGGSGGGSSSGSSSSSSSSSSSSSSSSSSSSP 477
Query: 357 STGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDS 416
S+ +S G + S+ G++ GS+ S RE + E G +P+L +
Sbjct: 478 SS-SSGGESSETSSDLFEGSNEGSSSSGSSGARREGRHRAPVTFDESGSLPFLSLAQFFL 536
Query: 417 SSEGDNDSGHELMQPGVFMLDGNNNLEDDS 446
+E D+D L + + L + E+D+
Sbjct: 537 LNEDDDDQPRGLTKEQIDNLAMRSFGENDA 566
>gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo
sapiens]
Length = 183
Score = 55.1 bits (131), Expect = 2e-07
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 519 IDALPEILVTEDHGAVGQEMC-CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTC 577
+ LPE + +EM C IC E+V G+ LPC H+FH C+ WL +S TC
Sbjct: 66 LQCLPEEVYDPGRDKSEEEMPECVICLLEFVCGDPIRCLPCKHFFHLDCIDTWLLRSFTC 125
Query: 578 PVCR 581
P CR
Sbjct: 126 PYCR 129
>gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo
sapiens]
Length = 183
Score = 55.1 bits (131), Expect = 2e-07
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 519 IDALPEILVTEDHGAVGQEMC-CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTC 577
+ LPE + +EM C IC E+V G+ LPC H+FH C+ WL +S TC
Sbjct: 66 LQCLPEEVYDPGRDKSEEEMPECVICLLEFVCGDPIRCLPCKHFFHLDCIDTWLLRSFTC 125
Query: 578 PVCR 581
P CR
Sbjct: 126 PYCR 129
>gi|21040269 ring finger protein 133 [Homo sapiens]
Length = 376
Score = 54.7 bits (130), Expect = 2e-07
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 540 CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRC 582
C IC Y ++ L C H+FHK C+ W+ GTCP+C+C
Sbjct: 256 CVICFERYKPNDIVRILTCKHFFHKNCIDPWILPHGTCPICKC 298
>gi|7662486 ring finger protein 44 [Homo sapiens]
Length = 432
Score = 54.7 bits (130), Expect = 2e-07
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 515 SKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKS 574
+K I+ LP D Q +C +C S++ ++ LPC+H FH CV WL+ +
Sbjct: 356 TKADIEQLPSYRFNPDSHQSEQTLCV-VCFSDFEARQLLRVLPCNHEFHTKCVDKWLKAN 414
Query: 575 GTCPVCR 581
TCP+CR
Sbjct: 415 RTCPICR 421
>gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 53.9 bits (128), Expect = 4e-07
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Query: 475 VDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAV 534
V P F + +E+ + E L E L E +K I+ LP ++
Sbjct: 319 VGPTFSFELDVEDGEVENYEALLNLAERLG---EAKPRGLTKADIEQLPSYRFNPNNHQS 375
Query: 535 GQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 581
Q +C +C ++ ++ LPC+H FH CV WL+ + TCP+CR
Sbjct: 376 EQTLCV-VCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421
>gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 53.9 bits (128), Expect = 4e-07
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Query: 475 VDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAV 534
V P F + +E+ + E L E L E +K I+ LP ++
Sbjct: 319 VGPTFSFELDVEDGEVENYEALLNLAERLG---EAKPRGLTKADIEQLPSYRFNPNNHQS 375
Query: 535 GQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 581
Q +C +C ++ ++ LPC+H FH CV WL+ + TCP+CR
Sbjct: 376 EQTLCV-VCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421
>gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens]
Length = 465
Score = 53.9 bits (128), Expect = 4e-07
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Query: 475 VDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAV 534
V P F + +E+ + E L E L E +K I+ LP ++
Sbjct: 352 VGPTFSFELDVEDGEVENYEALLNLAERLG---EAKPRGLTKADIEQLPSYRFNPNNHQS 408
Query: 535 GQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 581
Q +C +C ++ ++ LPC+H FH CV WL+ + TCP+CR
Sbjct: 409 EQTLCV-VCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 454
>gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 53.9 bits (128), Expect = 4e-07
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Query: 475 VDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAV 534
V P F + +E+ + E L E L E +K I+ LP ++
Sbjct: 319 VGPTFSFELDVEDGEVENYEALLNLAERLG---EAKPRGLTKADIEQLPSYRFNPNNHQS 375
Query: 535 GQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 581
Q +C +C ++ ++ LPC+H FH CV WL+ + TCP+CR
Sbjct: 376 EQTLCV-VCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421
>gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens]
Length = 515
Score = 53.9 bits (128), Expect = 4e-07
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Query: 475 VDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAV 534
V P F + +E+ + E L E L E +K I+ LP ++
Sbjct: 402 VGPTFSFELDVEDGEVENYEALLNLAERLG---EAKPRGLTKADIEQLPSYRFNPNNHQS 458
Query: 535 GQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 581
Q +C +C ++ ++ LPC+H FH CV WL+ + TCP+CR
Sbjct: 459 EQTLCV-VCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 504
>gi|29788758 ring finger protein 130 [Homo sapiens]
Length = 419
Score = 53.1 bits (126), Expect = 7e-07
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 540 CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 581
C +C Y + +V LPC H FHK CV WL + TCP+C+
Sbjct: 264 CAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCK 305
>gi|150378447 zinc and ring finger 3 [Homo sapiens]
Length = 836
Score = 52.8 bits (125), Expect = 9e-07
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 540 CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 581
C IC +Y+ GE +PC H FH+ CV WL + TCP CR
Sbjct: 193 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCR 234
>gi|37675277 ring finger protein 148 [Homo sapiens]
Length = 305
Score = 52.4 bits (124), Expect = 1e-06
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 516 KESIDALP-EILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKS 574
K++ID L +L D E C +C Y +V L C H+FHK C+ WL
Sbjct: 233 KKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAH 292
Query: 575 GTCPVCRC 582
TCP+C+C
Sbjct: 293 RTCPMCKC 300
>gi|27436927 synoviolin 1 isoform b [Homo sapiens]
Length = 617
Score = 52.0 bits (123), Expect = 2e-06
Identities = 27/62 (43%), Positives = 31/62 (50%), Gaps = 9/62 (14%)
Query: 520 DALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPV 579
DA PE L D+ C IC E V G A LPC+H FH C+ W Q+ TCP
Sbjct: 278 DATPEELQAMDN-------VCIICREEMVTG--AKRLPCNHIFHTSCLRSWFQRQQTCPT 328
Query: 580 CR 581
CR
Sbjct: 329 CR 330
>gi|27436925 synoviolin 1 isoform a [Homo sapiens]
Length = 616
Score = 52.0 bits (123), Expect = 2e-06
Identities = 27/62 (43%), Positives = 31/62 (50%), Gaps = 9/62 (14%)
Query: 520 DALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPV 579
DA PE L D+ C IC E V G A LPC+H FH C+ W Q+ TCP
Sbjct: 278 DATPEELQAMDN-------VCIICREEMVTG--AKRLPCNHIFHTSCLRSWFQRQQTCPT 328
Query: 580 CR 581
CR
Sbjct: 329 CR 330
>gi|14149702 ring finger protein 167 [Homo sapiens]
Length = 350
Score = 52.0 bits (123), Expect = 2e-06
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 515 SKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWL-QK 573
+KE + +P T D+ Q C IC EY G+ LPC H +H CV WL Q
Sbjct: 209 TKEQLKQIP----THDYQKGDQYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQT 264
Query: 574 SGTCPVCR 581
TCP+C+
Sbjct: 265 RKTCPICK 272
>gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens]
Length = 428
Score = 50.8 bits (120), Expect = 3e-06
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 540 CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRC 582
C +C Y ++ L C+H FHK CV WL + TCP+C+C
Sbjct: 277 CAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKC 319
>gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens]
Length = 402
Score = 50.8 bits (120), Expect = 3e-06
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 540 CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRC 582
C +C Y ++ L C+H FHK CV WL + TCP+C+C
Sbjct: 251 CAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKC 293
>gi|58331204 ring finger protein 150 [Homo sapiens]
Length = 438
Score = 50.8 bits (120), Expect = 3e-06
Identities = 19/42 (45%), Positives = 23/42 (54%)
Query: 540 CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 581
C +C Y +V LPC H FHK CV WL TCP+C+
Sbjct: 278 CAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCK 319
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.128 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,735,175
Number of Sequences: 37866
Number of extensions: 1465322
Number of successful extensions: 8552
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 311
Number of HSP's that attempted gapping in prelim test: 7733
Number of HSP's gapped (non-prelim): 957
length of query: 588
length of database: 18,247,518
effective HSP length: 108
effective length of query: 480
effective length of database: 14,157,990
effective search space: 6795835200
effective search space used: 6795835200
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.