BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homolog isoform b [Homo sapiens] (373 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 754 0.0 gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolo... 753 0.0 gi|23308699 transcription factor MAFB [Homo sapiens] 331 6e-91 gi|71274111 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 272 3e-73 gi|5453802 neural retina leucine zipper [Homo sapiens] 127 1e-29 gi|4505073 v-maf musculoaponeurotic fibrosarcoma oncogene homolo... 109 5e-24 gi|49619228 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 109 5e-24 gi|4505075 v-maf musculoaponeurotic fibrosarcoma oncogene homolo... 106 3e-23 gi|239048388 transcription factor MAFF isoform a [Homo sapiens] 100 2e-21 gi|239048350 transcription factor MAFF isoform a [Homo sapiens] 100 2e-21 gi|6912490 transcription factor MAFF isoform a [Homo sapiens] 100 2e-21 gi|239048390 transcription factor MAFF isoform b [Homo sapiens] 94 2e-19 gi|110347449 POU domain, class 4, transcription factor 1 [Homo s... 80 3e-15 gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 75 1e-13 gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 75 1e-13 gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 75 1e-13 gi|122937319 even-skipped homeobox 2 [Homo sapiens] 69 9e-12 gi|21322252 androgen receptor isoform 1 [Homo sapiens] 65 1e-10 gi|109148552 keratin 3 [Homo sapiens] 64 3e-10 gi|238859557 regulatory factor X1 [Homo sapiens] 63 4e-10 gi|55956899 keratin 9 [Homo sapiens] 62 8e-10 gi|154355000 KH-type splicing regulatory protein [Homo sapiens] 61 1e-09 gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens] 61 1e-09 gi|5902724 neuro-oncological ventral antigen 2 [Homo sapiens] 61 1e-09 gi|89145413 short stature homeobox 2 isoform a [Homo sapiens] 61 2e-09 gi|119395750 keratin 1 [Homo sapiens] 60 4e-09 gi|4885597 sine oculis homeobox homolog 3 [Homo sapiens] 60 4e-09 gi|4502565 calpain, small subunit 1 [Homo sapiens] 58 1e-08 gi|51599151 calpain, small subunit 1 [Homo sapiens] 58 1e-08 gi|40288197 GATA binding protein 6 [Homo sapiens] 58 2e-08 >gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homolog isoform b [Homo sapiens] Length = 373 Score = 754 bits (1948), Expect = 0.0 Identities = 373/373 (100%), Positives = 373/373 (100%) Query: 1 MASELAMSNSDLPTSPLAMEYVNDFDLMKFEVKKEPVETDRIISQCGRLIAGGSLSSTPM 60 MASELAMSNSDLPTSPLAMEYVNDFDLMKFEVKKEPVETDRIISQCGRLIAGGSLSSTPM Sbjct: 1 MASELAMSNSDLPTSPLAMEYVNDFDLMKFEVKKEPVETDRIISQCGRLIAGGSLSSTPM 60 Query: 61 STPCSSVPPSPSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEALGFSPEDAVEALISN 120 STPCSSVPPSPSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEALGFSPEDAVEALISN Sbjct: 61 STPCSSVPPSPSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEALGFSPEDAVEALISN 120 Query: 121 SHQLQGGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPH 180 SHQLQGGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPH Sbjct: 121 SHQLQGGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPH 180 Query: 181 YHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAA 240 YHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAA Sbjct: 181 YHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAA 240 Query: 241 GAGGALHPHHAAGGLHFDDRFSDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRG 300 GAGGALHPHHAAGGLHFDDRFSDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRG Sbjct: 241 GAGGALHPHHAAGGLHFDDRFSDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRG 300 Query: 301 YAQSCRFKRVQQRHVLESEKNQLLQQVDHLKQEISRLVRERDAYKEKYEKLVSSGFRENG 360 YAQSCRFKRVQQRHVLESEKNQLLQQVDHLKQEISRLVRERDAYKEKYEKLVSSGFRENG Sbjct: 301 YAQSCRFKRVQQRHVLESEKNQLLQQVDHLKQEISRLVRERDAYKEKYEKLVSSGFRENG 360 Query: 361 SSSDNPSSPEFFM 373 SSSDNPSSPEFFM Sbjct: 361 SSSDNPSSPEFFM 373 >gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolog isoform a [Homo sapiens] Length = 403 Score = 753 bits (1944), Expect = 0.0 Identities = 372/373 (99%), Positives = 373/373 (100%) Query: 1 MASELAMSNSDLPTSPLAMEYVNDFDLMKFEVKKEPVETDRIISQCGRLIAGGSLSSTPM 60 MASELAMSNSDLPTSPLAMEYVNDFDLMKFEVKKEPVETDRIISQCGRLIAGGSLSSTPM Sbjct: 1 MASELAMSNSDLPTSPLAMEYVNDFDLMKFEVKKEPVETDRIISQCGRLIAGGSLSSTPM 60 Query: 61 STPCSSVPPSPSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEALGFSPEDAVEALISN 120 STPCSSVPPSPSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEALGFSPEDAVEALISN Sbjct: 61 STPCSSVPPSPSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEALGFSPEDAVEALISN 120 Query: 121 SHQLQGGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPH 180 SHQLQGGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPH Sbjct: 121 SHQLQGGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPH 180 Query: 181 YHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAA 240 YHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAA Sbjct: 181 YHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAA 240 Query: 241 GAGGALHPHHAAGGLHFDDRFSDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRG 300 GAGGALHPHHAAGGLHFDDRFSDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRG Sbjct: 241 GAGGALHPHHAAGGLHFDDRFSDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRG 300 Query: 301 YAQSCRFKRVQQRHVLESEKNQLLQQVDHLKQEISRLVRERDAYKEKYEKLVSSGFRENG 360 YAQSCRFKRVQQRHVLESEKNQLLQQVDHLKQEISRLVRERDAYKEKYEKLVSSGFRENG Sbjct: 301 YAQSCRFKRVQQRHVLESEKNQLLQQVDHLKQEISRLVRERDAYKEKYEKLVSSGFRENG 360 Query: 361 SSSDNPSSPEFFM 373 SSSDNPSSPEFF+ Sbjct: 361 SSSDNPSSPEFFI 373 >gi|23308699 transcription factor MAFB [Homo sapiens] Length = 323 Score = 331 bits (849), Expect = 6e-91 Identities = 201/378 (53%), Positives = 234/378 (61%), Gaps = 60/378 (15%) Query: 1 MASELAMSNSDLPTSPLAMEYVNDFDLMKFEVKKEPV-ETDRIISQCGRLIAGGSLSSTP 59 MA+EL+M +LPTSPLAMEYVNDFDL+KF+VKKEP+ +R C RL GS+SSTP Sbjct: 1 MAAELSMG-PELPTSPLAMEYVNDFDLLKFDVKKEPLGRAERPGRPCTRLQPAGSVSSTP 59 Query: 60 MSTPCSSVPPSPSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEALGFSPEDAVEALIS 119 +STPCSSVP SPSFS +EQK HLED YWM QQ+NPEAL +PEDAVEALI Sbjct: 60 LSTPCSSVPSSPSFSP------TEQKTHLEDLYWMASNYQQMNPEALNLTPEDAVEALI- 112 Query: 120 NSH---QLQGGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSG 176 SH Q FD + RGA + G+G A Sbjct: 113 GSHPVPQPLQSFDSF-RGAHHHHHHHHPHPHHAYPGAG-----------------VAHDE 154 Query: 177 AGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGA-GGAGGGGPASAGGGGGGGGGGG 235 GPH H HH HHHH + P +A S A + G G ASA GG G Sbjct: 155 LGPHAHPHH-----HHHHQASPPPSSAASPAQQLPTSHPGPGPHATASATAAGGNGS--- 206 Query: 236 GGGAAGAGGALHPHHAAGGLHFDDRFSDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRT 295 +DRFSD+QLV+MSVRELNR LRG +K+EVIRLKQKRRT Sbjct: 207 ---------------------VEDRFSDDQLVSMSVRELNRHLRGFTKDEVIRLKQKRRT 245 Query: 296 LKNRGYAQSCRFKRVQQRHVLESEKNQLLQQVDHLKQEISRLVRERDAYKEKYEKLVSSG 355 LKNRGYAQSCR+KRVQQ+H LE+EK QL+QQV+ LKQE+SRL RERDAYK K EKL +SG Sbjct: 246 LKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKCEKLANSG 305 Query: 356 FRENGSSSDNPSSPEFFM 373 FRE GS+SD+PSSPEFF+ Sbjct: 306 FREAGSTSDSPSSPEFFL 323 >gi|71274111 v-maf musculoaponeurotic fibrosarcoma oncogene homolog A [Homo sapiens] Length = 353 Score = 272 bits (696), Expect = 3e-73 Identities = 185/396 (46%), Positives = 212/396 (53%), Gaps = 88/396 (22%) Query: 1 MASELAMSNSDLPTSPLAMEYVNDFDLMKFEVKKEPVETDRIISQCGRLIAGGSLSSTPM 60 MA+ELAM ++LP+SPLA+EYVNDFDLMKFEVKKEP E +R C RL GSLSSTP+ Sbjct: 1 MAAELAMG-AELPSSPLAIEYVNDFDLMKFEVKKEPPEAERF---CHRL-PPGSLSSTPL 55 Query: 61 STPCSSVPPSPSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEALGFSPEDAVEALISN 120 STPCSSVP SPSF APSPG+G Sbjct: 56 STPCSSVPSSPSFCAPSPGTGG-------------------------------------- 77 Query: 121 SHQLQGGFDGYARGAQQLAAAAG---AGAGASLGGSGE--------------EMGPAAAV 163 GG G G+ Q A G G GA G SG+ + P A Sbjct: 78 -----GGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSGKPALEDLYWMSGYQHHLNPEALN 132 Query: 164 VSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPAS 223 ++ A A G+G HH HH A HHP AA +A + G G AGGGG Sbjct: 133 LTPEDAVEAL-IGSG---HHGAHHGA---HHP------AAAAAYEAFRGPGFAGGGGADD 179 Query: 224 AGGGGGGGGGGGGGGAAGAGGALHPHHAAGG----------LHFDDRFSDEQLVTMSVRE 273 G G G A H HH GG + ++RFSD+QLV+MSVRE Sbjct: 180 MGAGHHHGAHHAAHHHHAAHHHHHHHHHHGGAGHGGGAGHHVRLEERFSDDQLVSMSVRE 239 Query: 274 LNRQLRGVSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHVLESEKNQLLQQVDHLKQE 333 LNRQLRG SKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRH+LESEK QL QV+ LK E Sbjct: 240 LNRQLRGFSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHILESEKCQLQSQVEQLKLE 299 Query: 334 ISRLVRERDAYKEKYEKLVSSGFRENGSSSDNPSSP 369 + RL +ERD YKEKYEKL G + + P P Sbjct: 300 VGRLAKERDLYKEKYEKLAGRGGPGSAGGAGFPREP 335 >gi|5453802 neural retina leucine zipper [Homo sapiens] Length = 237 Score = 127 bits (320), Expect = 1e-29 Identities = 73/144 (50%), Positives = 92/144 (63%) Query: 212 GAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGGLHFDDRFSDEQLVTMSV 271 GAG A G P A G G G G A + +RFSD LV+MSV Sbjct: 83 GAGEALGLSPEEAMELLQGQGPVPVDGPHGYYPGSPEETGAQHVQLAERFSDAALVSMSV 142 Query: 272 RELNRQLRGVSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHVLESEKNQLLQQVDHLK 331 RELNRQLRG ++E +RLKQ+RRTLKNRGYAQ+CR KR+QQR LE+E+ +L Q+D L+ Sbjct: 143 RELNRQLRGCGRDEALRLKQRRRTLKNRGYAQACRSKRLQQRRGLEAERARLAAQLDALR 202 Query: 332 QEISRLVRERDAYKEKYEKLVSSG 355 E++RL RERD YK + ++L SSG Sbjct: 203 AEVARLARERDLYKARCDRLTSSG 226 Score = 96.3 bits (238), Expect = 4e-20 Identities = 63/132 (47%), Positives = 76/132 (57%), Gaps = 13/132 (9%) Query: 12 LPTSPLAMEYVNDFDLMKFEVKKEPVETDRIISQCGRLIAGGSLSSTPMSTPCSSVPPSP 71 LP SPLAMEYVNDFDLMKFEVK+EP E GR G +++ STP SSVPPSP Sbjct: 3 LPPSPLAMEYVNDFDLMKFEVKREPSE--------GR---PGPPTASLGSTPYSSVPPSP 51 Query: 72 SFSAPS-PGSGSEQKAHLEDYYWMTGYPQQLNP-EALGFSPEDAVEALISNSHQLQGGFD 129 +FS P G+ + LE+ YW+ QQL EALG SPE+A+E L G Sbjct: 52 TFSEPGMVGATEGTRPGLEELYWLATLQQQLGAGEALGLSPEEAMELLQGQGPVPVDGPH 111 Query: 130 GYARGAQQLAAA 141 GY G+ + A Sbjct: 112 GYYPGSPEETGA 123 >gi|4505073 v-maf musculoaponeurotic fibrosarcoma oncogene homolog G [Homo sapiens] Length = 162 Score = 109 bits (272), Expect = 5e-24 Identities = 54/90 (60%), Positives = 70/90 (77%) Query: 262 SDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHVLESEKN 321 +DE+LVTMSVRELN+ LRG+SKEE+++LKQ+RRTLKNRGYA SCR KRV Q+ LE +K Sbjct: 25 TDEELVTMSVRELNQHLRGLSKEEIVQLKQRRRTLKNRGYAASCRVKRVTQKEELEKQKA 84 Query: 322 QLLQQVDHLKQEISRLVRERDAYKEKYEKL 351 +L Q+V+ L E + + E DA + KYE L Sbjct: 85 ELQQEVEKLASENASMKLELDALRSKYEAL 114 >gi|49619228 v-maf musculoaponeurotic fibrosarcoma oncogene homolog G [Homo sapiens] Length = 162 Score = 109 bits (272), Expect = 5e-24 Identities = 54/90 (60%), Positives = 70/90 (77%) Query: 262 SDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHVLESEKN 321 +DE+LVTMSVRELN+ LRG+SKEE+++LKQ+RRTLKNRGYA SCR KRV Q+ LE +K Sbjct: 25 TDEELVTMSVRELNQHLRGLSKEEIVQLKQRRRTLKNRGYAASCRVKRVTQKEELEKQKA 84 Query: 322 QLLQQVDHLKQEISRLVRERDAYKEKYEKL 351 +L Q+V+ L E + + E DA + KYE L Sbjct: 85 ELQQEVEKLASENASMKLELDALRSKYEAL 114 >gi|4505075 v-maf musculoaponeurotic fibrosarcoma oncogene homolog K [Homo sapiens] Length = 156 Score = 106 bits (265), Expect = 3e-23 Identities = 54/90 (60%), Positives = 70/90 (77%) Query: 262 SDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHVLESEKN 321 SD++LV+MSVRELN+ LRG++KEEV RLKQ+RRTLKNRGYA SCR KRV Q+ LE ++ Sbjct: 25 SDDELVSMSVRELNQHLRGLTKEEVTRLKQRRRTLKNRGYAASCRIKRVTQKEELERQRV 84 Query: 322 QLLQQVDHLKQEISRLVRERDAYKEKYEKL 351 +L Q+V+ L +E S + E DA + KYE L Sbjct: 85 ELQQEVEKLARENSSMRLELDALRSKYEAL 114 >gi|239048388 transcription factor MAFF isoform a [Homo sapiens] Length = 164 Score = 100 bits (250), Expect = 2e-21 Identities = 55/107 (51%), Positives = 76/107 (71%), Gaps = 2/107 (1%) Query: 262 SDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHVLESEKN 321 SDE L+ +SVRELNR LRG+S EEV RLKQ+RRTLKNRGYA SCR KRV Q+ L+ +K+ Sbjct: 25 SDEALMGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKS 84 Query: 322 QLLQQVDHLKQEISRLVRERDAYKEKYEKLVSSGFRENGSSSDNPSS 368 +L ++VD L +E + + E DA + K E L GF + +++ P++ Sbjct: 85 ELEREVDKLARENAAMRLELDALRGKCEAL--QGFARSVAAARGPAT 129 >gi|239048350 transcription factor MAFF isoform a [Homo sapiens] Length = 164 Score = 100 bits (250), Expect = 2e-21 Identities = 55/107 (51%), Positives = 76/107 (71%), Gaps = 2/107 (1%) Query: 262 SDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHVLESEKN 321 SDE L+ +SVRELNR LRG+S EEV RLKQ+RRTLKNRGYA SCR KRV Q+ L+ +K+ Sbjct: 25 SDEALMGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKS 84 Query: 322 QLLQQVDHLKQEISRLVRERDAYKEKYEKLVSSGFRENGSSSDNPSS 368 +L ++VD L +E + + E DA + K E L GF + +++ P++ Sbjct: 85 ELEREVDKLARENAAMRLELDALRGKCEAL--QGFARSVAAARGPAT 129 >gi|6912490 transcription factor MAFF isoform a [Homo sapiens] Length = 164 Score = 100 bits (250), Expect = 2e-21 Identities = 55/107 (51%), Positives = 76/107 (71%), Gaps = 2/107 (1%) Query: 262 SDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHVLESEKN 321 SDE L+ +SVRELNR LRG+S EEV RLKQ+RRTLKNRGYA SCR KRV Q+ L+ +K+ Sbjct: 25 SDEALMGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKS 84 Query: 322 QLLQQVDHLKQEISRLVRERDAYKEKYEKLVSSGFRENGSSSDNPSS 368 +L ++VD L +E + + E DA + K E L GF + +++ P++ Sbjct: 85 ELEREVDKLARENAAMRLELDALRGKCEAL--QGFARSVAAARGPAT 129 >gi|239048390 transcription factor MAFF isoform b [Homo sapiens] Length = 135 Score = 94.4 bits (233), Expect = 2e-19 Identities = 51/100 (51%), Positives = 71/100 (71%), Gaps = 2/100 (2%) Query: 269 MSVRELNRQLRGVSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHVLESEKNQLLQQVD 328 +SVRELNR LRG+S EEV RLKQ+RRTLKNRGYA SCR KRV Q+ L+ +K++L ++VD Sbjct: 3 LSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELEREVD 62 Query: 329 HLKQEISRLVRERDAYKEKYEKLVSSGFRENGSSSDNPSS 368 L +E + + E DA + K E L GF + +++ P++ Sbjct: 63 KLARENAAMRLELDALRGKCEAL--QGFARSVAAARGPAT 100 >gi|110347449 POU domain, class 4, transcription factor 1 [Homo sapiens] Length = 419 Score = 80.1 bits (196), Expect = 3e-15 Identities = 44/99 (44%), Positives = 49/99 (49%), Gaps = 23/99 (23%) Query: 180 HYHHHHHHAA-------GHHHHPTAGAPGAAGSAAASAGGAGG----AGGGGPASAGGGG 228 H+HHHHHH A H P+ AG A A+AGG G GGGGP GG G Sbjct: 101 HHHHHHHHQALEPGDLLDHISSPSLALMAGAGGAGAAAGGGGAHDGPGGGGGPGGGGGPG 160 Query: 229 GGGGGGGGGGAAGA---------GGALHPH---HAAGGL 255 GG GGGGGGG G GG+ HPH H+ G L Sbjct: 161 GGPGGGGGGGPGGGGGGPGGGLLGGSAHPHPHMHSLGHL 199 Score = 44.7 bits (104), Expect = 1e-04 Identities = 39/140 (27%), Positives = 45/140 (32%), Gaps = 4/140 (2%) Query: 110 PEDAVEALISNSHQLQGGFDGYARGAQQLAAAAGAGAGASLGGSGEEMG-PAAAVVSAVI 168 P D ++ + S S L G G A A G G G GG G G P Sbjct: 113 PGDLLDHISSPSLALMAGAGGAGAAAGGGGAHDGPGGGGGPGGGGGPGGGPGGGGGGGPG 172 Query: 169 AAAAAQSGA---GPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAG 225 G G + H H H+ GH HP A A S G A G A+A Sbjct: 173 GGGGGPGGGLLGGSAHPHPHMHSLGHLSHPAAAAAMNMPSGLPHPGLVAAAAHHGAAAAA 232 Query: 226 GGGGGGGGGGGGGAAGAGGA 245 G AA GA Sbjct: 233 AAAAAGQVAAASAAAAVVGA 252 Score = 38.1 bits (87), Expect = 0.013 Identities = 35/118 (29%), Positives = 41/118 (34%), Gaps = 18/118 (15%) Query: 121 SHQLQGGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVI------------ 168 +H GG G G G G G GG G GP ++ Sbjct: 143 AHDGPGGGGGPGGGGGPGGGPGGGGGGGPGGGGG---GPGGGLLGGSAHPHPHMHSLGHL 199 Query: 169 ---AAAAAQSGAGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPAS 223 AAAAA + H AA HH A A AAG AA++ A G G AS Sbjct: 200 SHPAAAAAMNMPSGLPHPGLVAAAAHHGAAAAAAAAAAGQVAAASAAAAVVGAAGLAS 257 >gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 [Homo sapiens] Length = 2191 Score = 74.7 bits (182), Expect = 1e-13 Identities = 45/129 (34%), Positives = 56/129 (43%), Gaps = 7/129 (5%) Query: 128 FDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGA-GPHYHHHHH 186 F+ Y A + G AG G + P ++ + AAAA G+ P + H Sbjct: 172 FNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEG 231 Query: 187 HAAGH-HHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGA 245 + +H+P PGA G GG GG GGGG GGGGG G GG G GA A A Sbjct: 232 YPNSQCNHYPGYSRPGAGGG-----GGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAA 286 Query: 246 LHPHHAAGG 254 A GG Sbjct: 287 AAAAAAGGG 295 Score = 47.4 bits (111), Expect = 2e-05 Identities = 42/131 (32%), Positives = 49/131 (37%), Gaps = 17/131 (12%) Query: 126 GGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHH 185 GG G G + G G GA GG+G A AV +A AAAAA G G Sbjct: 249 GGGGGGGGGGGGGSGGGGGGGGAGAGGAG-----AGAVAAAAAAAAAAAGGGG------- 296 Query: 186 HHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGA 245 G + +AG + G G GGGG AS G GG AG Sbjct: 297 ---GGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQN-- 351 Query: 246 LHPHHAAGGLH 256 HP A L+ Sbjct: 352 QHPSGATPTLN 362 Score = 40.0 bits (92), Expect = 0.003 Identities = 42/158 (26%), Positives = 56/158 (35%), Gaps = 36/158 (22%) Query: 118 ISNSHQLQGGFDGYARGAQQLAAAAGAGA-GASLGGSGEEMGPAAAVVSAVIAAAAAQSG 176 ISN++ L G G + + GA ++ GG + GP +++ + Sbjct: 76 ISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP------LLSKPGDEDD 129 Query: 177 AGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGA----------GGGGPASAGG 226 A P A G + HP GA G A GG GG G PAS G Sbjct: 130 APPKMGEP---AGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGP 186 Query: 227 GGGGG------GG----------GGGGGAAGAGGALHP 248 GG G GG AAGA G++ P Sbjct: 187 GGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDP 224 Score = 38.5 bits (88), Expect = 0.010 Identities = 13/18 (72%), Positives = 13/18 (72%) Query: 177 AGPHYHHHHHHAAGHHHH 194 A PH HHHHH A HHHH Sbjct: 20 APPHQQHHHHHHAHHHHH 37 Score = 38.1 bits (87), Expect = 0.013 Identities = 40/157 (25%), Positives = 51/157 (32%), Gaps = 38/157 (24%) Query: 127 GFDGYARGAQQLAAAAGAGAGASLGGS---------------GEEMGPAAAVVSAVIAAA 171 G A A AAAAG G G GGS G MGP +++ AA Sbjct: 277 GAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAA 336 Query: 172 AAQSGAG-PHYHHHHHHAAG----------------------HHHHPTAGAPGAAGSAAA 208 A + G + + H +G + + + AP S Sbjct: 337 AGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQ 396 Query: 209 SAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGA 245 S A GA GG +A G G G G AA A Sbjct: 397 SQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWA 433 Score = 33.5 bits (75), Expect = 0.32 Identities = 11/15 (73%), Positives = 11/15 (73%) Query: 180 HYHHHHHHAAGHHHH 194 H HHHHHHA HHH Sbjct: 31 HAHHHHHHAHHLHHH 45 Score = 32.3 bits (72), Expect = 0.71 Identities = 26/92 (28%), Positives = 29/92 (31%), Gaps = 19/92 (20%) Query: 169 AAAAAQSGAGPHYHHHHHHAAGHHHHPTA-------------------GAPGAAGSAAAS 209 AA Q H+ HHHHH A H HH A ++ Sbjct: 19 AAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISN 78 Query: 210 AGGAGGAGGGGPASAGGGGGGGGGGGGGGAAG 241 GGAGGG P GG AAG Sbjct: 79 NNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAG 110 Score = 29.3 bits (64), Expect = 6.0 Identities = 36/165 (21%), Positives = 57/165 (34%), Gaps = 25/165 (15%) Query: 63 PCSSVPPSPSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEALGFSPEDAVEALISNSH 122 P S PS S+S P PG G + G Q LG P ++ + Sbjct: 799 PAYSGVPSASYSGPGPGMGISANNQMHG----QGPSQPCGAVPLGRMPSAGMQ-----NR 849 Query: 123 QLQGGFDGYARGAQQLAAAAGAGAGASLGG-SGEEMGPAAAVVSAVIAAAAAQSGAGPHY 181 G + ++ G G G + + + AAAV+ A +A ++ G+ P Sbjct: 850 PFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGM 909 Query: 182 HHHHHHAAGHHHH---------------PTAGAPGAAGSAAASAG 211 + A+ + P + AP S+AAS G Sbjct: 910 NQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVG 954 >gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 [Homo sapiens] Length = 2231 Score = 74.7 bits (182), Expect = 1e-13 Identities = 45/129 (34%), Positives = 56/129 (43%), Gaps = 7/129 (5%) Query: 128 FDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGA-GPHYHHHHH 186 F+ Y A + G AG G + P ++ + AAAA G+ P + H Sbjct: 172 FNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEG 231 Query: 187 HAAGH-HHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGA 245 + +H+P PGA G GG GG GGGG GGGGG G GG G GA A A Sbjct: 232 YPNSQCNHYPGYSRPGAGGG-----GGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAA 286 Query: 246 LHPHHAAGG 254 A GG Sbjct: 287 AAAAAAGGG 295 Score = 47.4 bits (111), Expect = 2e-05 Identities = 42/131 (32%), Positives = 49/131 (37%), Gaps = 17/131 (12%) Query: 126 GGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHH 185 GG G G + G G GA GG+G A AV +A AAAAA G G Sbjct: 249 GGGGGGGGGGGGGSGGGGGGGGAGAGGAG-----AGAVAAAAAAAAAAAGGGG------- 296 Query: 186 HHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGA 245 G + +AG + G G GGGG AS G GG AG Sbjct: 297 ---GGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQN-- 351 Query: 246 LHPHHAAGGLH 256 HP A L+ Sbjct: 352 QHPSGATPTLN 362 Score = 40.0 bits (92), Expect = 0.003 Identities = 42/158 (26%), Positives = 56/158 (35%), Gaps = 36/158 (22%) Query: 118 ISNSHQLQGGFDGYARGAQQLAAAAGAGA-GASLGGSGEEMGPAAAVVSAVIAAAAAQSG 176 ISN++ L G G + + GA ++ GG + GP +++ + Sbjct: 76 ISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP------LLSKPGDEDD 129 Query: 177 AGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGA----------GGGGPASAGG 226 A P A G + HP GA G A GG GG G PAS G Sbjct: 130 APPKMGEP---AGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGP 186 Query: 227 GGGGG------GG----------GGGGGAAGAGGALHP 248 GG G GG AAGA G++ P Sbjct: 187 GGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDP 224 Score = 38.5 bits (88), Expect = 0.010 Identities = 13/18 (72%), Positives = 13/18 (72%) Query: 177 AGPHYHHHHHHAAGHHHH 194 A PH HHHHH A HHHH Sbjct: 20 APPHQQHHHHHHAHHHHH 37 Score = 38.1 bits (87), Expect = 0.013 Identities = 40/157 (25%), Positives = 51/157 (32%), Gaps = 38/157 (24%) Query: 127 GFDGYARGAQQLAAAAGAGAGASLGGS---------------GEEMGPAAAVVSAVIAAA 171 G A A AAAAG G G GGS G MGP +++ AA Sbjct: 277 GAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAA 336 Query: 172 AAQSGAG-PHYHHHHHHAAG----------------------HHHHPTAGAPGAAGSAAA 208 A + G + + H +G + + + AP S Sbjct: 337 AGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQ 396 Query: 209 SAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGA 245 S A GA GG +A G G G G AA A Sbjct: 397 SQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWA 433 Score = 33.5 bits (75), Expect = 0.32 Identities = 11/15 (73%), Positives = 11/15 (73%) Query: 180 HYHHHHHHAAGHHHH 194 H HHHHHHA HHH Sbjct: 31 HAHHHHHHAHHLHHH 45 Score = 32.3 bits (72), Expect = 0.71 Identities = 26/92 (28%), Positives = 29/92 (31%), Gaps = 19/92 (20%) Query: 169 AAAAAQSGAGPHYHHHHHHAAGHHHHPTA-------------------GAPGAAGSAAAS 209 AA Q H+ HHHHH A H HH A ++ Sbjct: 19 AAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISN 78 Query: 210 AGGAGGAGGGGPASAGGGGGGGGGGGGGGAAG 241 GGAGGG P GG AAG Sbjct: 79 NNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAG 110 Score = 29.3 bits (64), Expect = 6.0 Identities = 36/165 (21%), Positives = 57/165 (34%), Gaps = 25/165 (15%) Query: 63 PCSSVPPSPSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEALGFSPEDAVEALISNSH 122 P S PS S+S P PG G + G Q LG P ++ + Sbjct: 786 PAYSGVPSASYSGPGPGMGISANNQMHG----QGPSQPCGAVPLGRMPSAGMQ-----NR 836 Query: 123 QLQGGFDGYARGAQQLAAAAGAGAGASLGG-SGEEMGPAAAVVSAVIAAAAAQSGAGPHY 181 G + ++ G G G + + + AAAV+ A +A ++ G+ P Sbjct: 837 PFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGM 896 Query: 182 HHHHHHAAGHHHH---------------PTAGAPGAAGSAAASAG 211 + A+ + P + AP S+AAS G Sbjct: 897 NQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVG 941 >gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 [Homo sapiens] Length = 2178 Score = 74.7 bits (182), Expect = 1e-13 Identities = 45/129 (34%), Positives = 56/129 (43%), Gaps = 7/129 (5%) Query: 128 FDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGA-GPHYHHHHH 186 F+ Y A + G AG G + P ++ + AAAA G+ P + H Sbjct: 172 FNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEG 231 Query: 187 HAAGH-HHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGA 245 + +H+P PGA G GG GG GGGG GGGGG G GG G GA A A Sbjct: 232 YPNSQCNHYPGYSRPGAGGG-----GGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAA 286 Query: 246 LHPHHAAGG 254 A GG Sbjct: 287 AAAAAAGGG 295 Score = 47.4 bits (111), Expect = 2e-05 Identities = 42/131 (32%), Positives = 49/131 (37%), Gaps = 17/131 (12%) Query: 126 GGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHH 185 GG G G + G G GA GG+G A AV +A AAAAA G G Sbjct: 249 GGGGGGGGGGGGGSGGGGGGGGAGAGGAG-----AGAVAAAAAAAAAAAGGGG------- 296 Query: 186 HHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGA 245 G + +AG + G G GGGG AS G GG AG Sbjct: 297 ---GGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQN-- 351 Query: 246 LHPHHAAGGLH 256 HP A L+ Sbjct: 352 QHPSGATPTLN 362 Score = 40.0 bits (92), Expect = 0.003 Identities = 42/158 (26%), Positives = 56/158 (35%), Gaps = 36/158 (22%) Query: 118 ISNSHQLQGGFDGYARGAQQLAAAAGAGA-GASLGGSGEEMGPAAAVVSAVIAAAAAQSG 176 ISN++ L G G + + GA ++ GG + GP +++ + Sbjct: 76 ISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP------LLSKPGDEDD 129 Query: 177 AGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGA----------GGGGPASAGG 226 A P A G + HP GA G A GG GG G PAS G Sbjct: 130 APPKMGEP---AGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGP 186 Query: 227 GGGGG------GG----------GGGGGAAGAGGALHP 248 GG G GG AAGA G++ P Sbjct: 187 GGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDP 224 Score = 38.5 bits (88), Expect = 0.010 Identities = 13/18 (72%), Positives = 13/18 (72%) Query: 177 AGPHYHHHHHHAAGHHHH 194 A PH HHHHH A HHHH Sbjct: 20 APPHQQHHHHHHAHHHHH 37 Score = 38.1 bits (87), Expect = 0.013 Identities = 40/157 (25%), Positives = 51/157 (32%), Gaps = 38/157 (24%) Query: 127 GFDGYARGAQQLAAAAGAGAGASLGGS---------------GEEMGPAAAVVSAVIAAA 171 G A A AAAAG G G GGS G MGP +++ AA Sbjct: 277 GAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAA 336 Query: 172 AAQSGAG-PHYHHHHHHAAG----------------------HHHHPTAGAPGAAGSAAA 208 A + G + + H +G + + + AP S Sbjct: 337 AGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQ 396 Query: 209 SAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGA 245 S A GA GG +A G G G G AA A Sbjct: 397 SQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWA 433 Score = 33.5 bits (75), Expect = 0.32 Identities = 11/15 (73%), Positives = 11/15 (73%) Query: 180 HYHHHHHHAAGHHHH 194 H HHHHHHA HHH Sbjct: 31 HAHHHHHHAHHLHHH 45 Score = 32.3 bits (72), Expect = 0.71 Identities = 26/92 (28%), Positives = 29/92 (31%), Gaps = 19/92 (20%) Query: 169 AAAAAQSGAGPHYHHHHHHAAGHHHHPTA-------------------GAPGAAGSAAAS 209 AA Q H+ HHHHH A H HH A ++ Sbjct: 19 AAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISN 78 Query: 210 AGGAGGAGGGGPASAGGGGGGGGGGGGGGAAG 241 GGAGGG P GG AAG Sbjct: 79 NNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAG 110 Score = 29.3 bits (64), Expect = 6.0 Identities = 36/165 (21%), Positives = 57/165 (34%), Gaps = 25/165 (15%) Query: 63 PCSSVPPSPSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEALGFSPEDAVEALISNSH 122 P S PS S+S P PG G + G Q LG P ++ + Sbjct: 786 PAYSGVPSASYSGPGPGMGISANNQMHG----QGPSQPCGAVPLGRMPSAGMQ-----NR 836 Query: 123 QLQGGFDGYARGAQQLAAAAGAGAGASLGG-SGEEMGPAAAVVSAVIAAAAAQSGAGPHY 181 G + ++ G G G + + + AAAV+ A +A ++ G+ P Sbjct: 837 PFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGM 896 Query: 182 HHHHHHAAGHHHH---------------PTAGAPGAAGSAAASAG 211 + A+ + P + AP S+AAS G Sbjct: 897 NQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVG 941 >gi|122937319 even-skipped homeobox 2 [Homo sapiens] Length = 476 Score = 68.6 bits (166), Expect = 9e-12 Identities = 49/122 (40%), Positives = 60/122 (49%), Gaps = 13/122 (10%) Query: 136 QQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHP 195 Q AAAAG + AS AAA +A A++AA +GA P H Sbjct: 345 QAPAAAAGLNSAASAA--------AAAAAAAAAASSAAAAGAPPSGGSAPCSCLSCHSSQ 396 Query: 196 TAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGGL 255 +A A AA +AAA+ G GG GGGG GGGGGGGG G GGG+ A P +G L Sbjct: 397 SAAA--AAAAAAAALGSRGGGGGGG---GGGGGGGGGAGAGGGSDFGCSAAAPRSESGFL 451 Query: 256 HF 257 + Sbjct: 452 PY 453 Score = 48.1 bits (113), Expect = 1e-05 Identities = 44/143 (30%), Positives = 55/143 (38%), Gaps = 41/143 (28%) Query: 139 AAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHPTAG 198 AAAA A +GA+ S A ++ A + + P H G + P A Sbjct: 295 AAAAAAASGAAAAASSPF---ATSIRPLDTFRALSHPYSRPELLCSFRHP-GLYQAPAAA 350 Query: 199 APGAAGSAAASAGGAGGA-------------GGGGPAS---------------------- 223 A + ++AA+A A A GG P S Sbjct: 351 AGLNSAASAAAAAAAAAAAASSAAAAGAPPSGGSAPCSCLSCHSSQSAAAAAAAAAAALG 410 Query: 224 --AGGGGGGGGGGGGGGAAGAGG 244 GGGGGGGGGGGGGG AGAGG Sbjct: 411 SRGGGGGGGGGGGGGGGGAGAGG 433 Score = 34.7 bits (78), Expect = 0.14 Identities = 31/99 (31%), Positives = 39/99 (39%), Gaps = 17/99 (17%) Query: 162 AVVSAVIAAAAAQSGAGPHYHHHHHHA-------AGHHHHPTAGAPGAA------GSAAA 208 + VS+ I++AA HY A G + G GAA G A Sbjct: 86 STVSSEISSAAESRKKPGHYSEAAAEADMSSDVEVGCSALRSPGGLGAAQLKENNGKGYA 145 Query: 209 SAGGAGG----AGGGGPASAGGGGGGGGGGGGGGAAGAG 243 +G A G A G G S GG GG GG G +G+G Sbjct: 146 ESGSAAGTTTSASGSGLGSLHGGSGGSGGSAALGGSGSG 184 Score = 32.3 bits (72), Expect = 0.71 Identities = 31/111 (27%), Positives = 41/111 (36%), Gaps = 27/111 (24%) Query: 155 EEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAG 214 + G + V S + +AA ++ G H+ AA + G SA S GG G Sbjct: 80 QHTGSESTVSSEISSAAESRKKPG-----HYSEAAAEADMSSDVEVGC--SALRSPGGLG 132 Query: 215 ---------------GAGGGGPASAGGGG-----GGGGGGGGGGAAGAGGA 245 G+ G SA G G GG GG GG A G G+ Sbjct: 133 AAQLKENNGKGYAESGSAAGTTTSASGSGLGSLHGGSGGSGGSAALGGSGS 183 Score = 32.3 bits (72), Expect = 0.71 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Query: 203 AGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGA 242 +GSAA + A G+G G G GG GG GG +GA Sbjct: 147 SGSAAGTTTSASGSGLGS-LHGGSGGSGGSAALGGSGSGA 185 Score = 29.3 bits (64), Expect = 6.0 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%) Query: 172 AAQSGAGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGA 216 AA +G+ P+ H H H++P G AA +AAAS A + Sbjct: 268 AAATGSLPYPFHSH---VPLHYYPHVGVTAAAAAAAASGAAAAAS 309 >gi|21322252 androgen receptor isoform 1 [Homo sapiens] Length = 920 Score = 64.7 bits (156), Expect = 1e-10 Identities = 78/250 (31%), Positives = 93/250 (37%), Gaps = 50/250 (20%) Query: 49 LIAGGSLSSTPMSTPCSSVPPS--PSFSAP-----------SPGSGSEQKAHLEDYYWMT 95 L G L M P VPP+ P+ AP S G +E A + Sbjct: 257 LSPGEQLRGDCMYAPLLGVPPAVRPTPCAPLAECKGSLLDDSAGKSTEDTAEYSPF--KG 314 Query: 96 GYPQQLNPEALGFSPEDAVEALISNSHQLQGGFDGYARGAQQLAAAAGAGA--GASLGGS 153 GY + L E+LG S A + S + +L Y GA AAA + L + Sbjct: 315 GYTKGLEGESLGCSGSAAAGS--SGTLELPSTLSLYKSGALDEAAAYQSRDYYNFPLALA 372 Query: 154 GEEMGPAAAVVSAVI------------AAAAAQSGAGPHYHHHHHHAAGHHHHPTAGAPG 201 G P A I AAAAAQ G H AAG P +G+P Sbjct: 373 GPPPPPPPPHPHARIKLENPLDYGSAWAAAAAQCRYGDLASLHGAGAAG----PGSGSPS 428 Query: 202 AAGSAA-------------ASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHP 248 AA S++ GG GG GGGG GGGGGGGGGGG GA G P Sbjct: 429 AAASSSWHTLFTAEEGQLYGPCGGGGGGGGGG--GGGGGGGGGGGGGEAGAVAPYGYTRP 486 Query: 249 HHAAGGLHFD 258 G D Sbjct: 487 PQGLAGQESD 496 >gi|109148552 keratin 3 [Homo sapiens] Length = 628 Score = 63.5 bits (153), Expect = 3e-10 Identities = 71/237 (29%), Positives = 99/237 (41%), Gaps = 32/237 (13%) Query: 107 GFSPEDAVEALISNSHQLQ-----GGFDGYARGAQQLAAAAGAGAGASLGGS-------- 153 GFS AV +S S ++ GG G A G + A G+ + +LGG+ Sbjct: 15 GFSGRSAV---VSGSSRMSCVAHSGGAGGGAYGFRSGAGGFGSRSLYNLGGNKSISISVA 71 Query: 154 --GEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAG 211 G G S+ A G G Y G G GA G G Sbjct: 72 AGGSRAGGFGGGRSSCAFAGGYGGGFGSGYGGGFGGGFGGGRGMGGGFGGAGGF-----G 126 Query: 212 GAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGGLHFDDRFSDEQLVTMSV 271 GAGG GG G GG GG GG GG G+ G+ G P GG+ + + L ++V Sbjct: 127 GAGGFGGAGGFGGPGGFGGSGGFGGPGSLGSPGGFGPGGFPGGIQ-EVTINQSLLQPLNV 185 Query: 272 RELNRQLRGVSKEEVIRLKQKRRTLKNR--GYAQSCRFKRVQQRHVLESEKNQLLQQ 326 E++ Q+ V +E +++ +TL N+ + RF QQ VLE++ N L QQ Sbjct: 186 -EIDPQIGQVKAQE----REQIKTLNNKFASFIDKVRFLE-QQNKVLETKWNLLQQQ 236 Score = 45.8 bits (107), Expect = 6e-05 Identities = 24/49 (48%), Positives = 28/49 (57%), Gaps = 7/49 (14%) Query: 202 AAGSAAASAGGAGGAGGGGPA-------SAGGGGGGGGGGGGGGAAGAG 243 ++ + +ASAGG GG GGG SAGGG G G G GGGG G G Sbjct: 527 SSSTTSASAGGYGGGYGGGMGGGLGGGFSAGGGSGSGFGRGGGGGIGGG 575 Score = 44.7 bits (104), Expect = 1e-04 Identities = 21/43 (48%), Positives = 23/43 (53%) Query: 202 AAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGG 244 A G GG GG GGG ++ GG G G G GGGGG G G Sbjct: 535 AGGYGGGYGGGMGGGLGGGFSAGGGSGSGFGRGGGGGIGGGFG 577 Score = 44.3 bits (103), Expect = 2e-04 Identities = 22/45 (48%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Query: 201 GAAGSAAASAGGAGGAGGGGPASAGGGGGGG-GGGGGGGAAGAGG 244 G G GG AGGG + G GGGGG GGG GGG++G G Sbjct: 541 GYGGGMGGGLGGGFSAGGGSGSGFGRGGGGGIGGGFGGGSSGFSG 585 Score = 43.5 bits (101), Expect = 3e-04 Identities = 27/87 (31%), Positives = 34/87 (39%), Gaps = 9/87 (10%) Query: 159 PAAAVVSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGG 218 P+A +S V ++ + S G G + G G SA +G G GG Sbjct: 518 PSAVSISVVSSSTTSASAGG---------YGGGYGGGMGGGLGGGFSAGGGSGSGFGRGG 568 Query: 219 GGPASAGGGGGGGGGGGGGGAAGAGGA 245 GG G GGG G GG G GA Sbjct: 569 GGGIGGGFGGGSSGFSGGSGFGSISGA 595 Score = 38.5 bits (88), Expect = 0.010 Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 9/70 (12%) Query: 190 GHHHHPTAGAPGAAG----SAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGA 245 G + + P A S++ ++ AGG GGG GGG GGG GGG A G G+ Sbjct: 508 GEEYRMSGECPSAVSISVVSSSTTSASAGGYGGGY-----GGGMGGGLGGGFSAGGGSGS 562 Query: 246 LHPHHAAGGL 255 GG+ Sbjct: 563 GFGRGGGGGI 572 Score = 35.8 bits (81), Expect = 0.064 Identities = 28/100 (28%), Positives = 37/100 (37%), Gaps = 2/100 (2%) Query: 146 AGASLGGSGEEMGPAAAVVSAV--IAAAAAQSGAGPHYHHHHHHAAGHHHHPTAGAPGAA 203 A + GG + +AVVS ++ A GAG + A G G Sbjct: 5 ASKTSGGGSQGFSGRSAVVSGSSRMSCVAHSGGAGGGAYGFRSGAGGFGSRSLYNLGGNK 64 Query: 204 GSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAG 243 + + A G AGG G + GG GGG G G G Sbjct: 65 SISISVAAGGSRAGGFGGGRSSCAFAGGYGGGFGSGYGGG 104 >gi|238859557 regulatory factor X1 [Homo sapiens] Length = 979 Score = 63.2 bits (152), Expect = 4e-10 Identities = 35/100 (35%), Positives = 44/100 (44%), Gaps = 14/100 (14%) Query: 155 EEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAG 214 E G A V + + A A SG+ P Y +G+ A S + AG + Sbjct: 333 EAAGTATQVSTPATSQAVASSGSMPMY--------------VSGSQVVASSTSTGAGASN 378 Query: 215 GAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGG 254 +GGGG GGGGGGGGGGG G G G + GG Sbjct: 379 SSGGGGSGGGGGGGGGGGGGGSGSTGGGGSGAGTYVIQGG 418 Score = 30.0 bits (66), Expect = 3.5 Identities = 37/180 (20%), Positives = 59/180 (32%), Gaps = 19/180 (10%) Query: 13 PTSPLAMEYVNDFDLMKFEVKKEPVETDRIISQCGRLIAGGSLSSTPMSTPCS--SVPPS 70 P PL ++ + + + + + V + S + + GG S T + S S P + Sbjct: 261 PVQPLTVQGLQPVHVAQEVQQLQQVPVPHVYSSQVQYVEGGDASYTASAIRSSTYSYPET 320 Query: 71 PSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEAL-------GFSPEDAVEALISNSHQ 123 P ++ + S YY G Q++ A G P + + S Sbjct: 321 PLYTQTASTS----------YYEAAGTATQVSTPATSQAVASSGSMPMYVSGSQVVASST 370 Query: 124 LQGGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHH 183 G + G G G G GGSG G + + VI A Y H Sbjct: 371 STGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTGGGGSGAGTYVIQGGYMLGSASQSYSH 430 >gi|55956899 keratin 9 [Homo sapiens] Length = 623 Score = 62.0 bits (149), Expect = 8e-10 Identities = 41/131 (31%), Positives = 55/131 (41%), Gaps = 4/131 (3%) Query: 126 GGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHH 185 G + +RG + G G GGSG G + + + G G H Sbjct: 483 GSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGH 542 Query: 186 HHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGG--GGGGGGGGGAAGAG 243 +G H + G+ G G + S GG+GG GGG S GG GG GGG G GG + G+ Sbjct: 543 SGGSGGGH--SGGSGGNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSY 600 Query: 244 GALHPHHAAGG 254 G +GG Sbjct: 601 GGGEEASGSGG 611 Score = 60.1 bits (144), Expect = 3e-09 Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 1/80 (1%) Query: 174 QSGAGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGG 233 + G+G Y +G + G+ G G + S GG+GG+ GGG S GG GGG GG Sbjct: 478 RGGSGGSYGRGSRGGSGGSYGG-GGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGG 536 Query: 234 GGGGGAAGAGGALHPHHAAG 253 G GGG +G G H + G Sbjct: 537 GSGGGHSGGSGGGHSGGSGG 556 Score = 57.0 bits (136), Expect = 3e-08 Identities = 43/142 (30%), Positives = 54/142 (38%), Gaps = 43/142 (30%) Query: 125 QGGFDG-YARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHH 183 +GG G Y RG++ G+G S GG G G + ++ G+G Y Sbjct: 478 RGGSGGSYGRGSR-------GGSGGSYGGGGSGGGYGGG--------SGSRGGSGGSYG- 521 Query: 184 HHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGG---------GGGGGG 234 G +GS S GG GG GGG + GGG GGG G Sbjct: 522 -----------------GGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGS 564 Query: 235 GGGGAAGAGGALHPHHAAGGLH 256 GGG G GG +GG H Sbjct: 565 GGGSGGGYGGGSGSRGGSGGSH 586 Score = 51.2 bits (121), Expect = 1e-06 Identities = 36/119 (30%), Positives = 50/119 (42%), Gaps = 12/119 (10%) Query: 127 GFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHH 186 G G R + +++G G G S G ++ V + G G + + Sbjct: 23 GSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRV-------CGRGGGGSFGYSYGG 75 Query: 187 HAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGA 245 + G + G GS G GGA GGG +S+GG GGG GGG GGG G G+ Sbjct: 76 GSGGGFSASSLGGGFGGGSR-----GFGGASGGGYSSSGGFGGGFGGGSGGGFGGGYGS 129 Score = 50.8 bits (120), Expect = 2e-06 Identities = 44/165 (26%), Positives = 61/165 (36%), Gaps = 12/165 (7%) Query: 126 GGFDGYARGAQ------QLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQS-GAG 178 GG G G + +++ G G G S G ++ V + S G G Sbjct: 17 GGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGGG 76 Query: 179 PHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGG-----GGGGG 233 G + G GA+G +S+GG GG GGG GGG GG GG Sbjct: 77 SGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFGGFGG 136 Query: 234 GGGGGAAGAGGALHPHHAAGGLHFDDRFSDEQLVTMSVRELNRQL 278 GGG G GG L + + + R + ++ E N L Sbjct: 137 FGGGAGGGDGGILTANEKSTMQELNSRLASYLDKVQALEEANNDL 181 Score = 47.8 bits (112), Expect = 2e-05 Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 10/127 (7%) Query: 126 GGFDGYARGAQQLAAAAGA--GAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHH 183 G GY G+ + G+ G S GGSG G + + + G+G +Y Sbjct: 501 GSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGG 560 Query: 184 HHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGG---GGGGGGGAA 240 G + G G + +GG+ G G G +GG GGG G GGG Sbjct: 561 GSGSGGG-----SGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGG 615 Query: 241 GAGGALH 247 G+G + H Sbjct: 616 GSGKSSH 622 Score = 46.2 bits (108), Expect = 5e-05 Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 3/75 (4%) Query: 183 HHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAG--GGGPASAGGGGGGGG-GGGGGGA 239 +H+ G ++GA +GG+ G G GG S GGGG GGG GGG G Sbjct: 454 YHNLLEGGQEDFESSGAGKIGLGGRGGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSR 513 Query: 240 AGAGGALHPHHAAGG 254 G+GG+ +GG Sbjct: 514 GGSGGSYGGGSGSGG 528 Score = 45.1 bits (105), Expect = 1e-04 Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 198 GAPGAAGS-AAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGG 254 G G+ GS S GG+GG+ GGG S GG GGG G GG G + GG+ + GG Sbjct: 477 GRGGSGGSYGRGSRGGSGGSYGGG-GSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGG 533 Score = 37.4 bits (85), Expect = 0.022 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 15/62 (24%) Query: 208 ASAGGAGGAGGGGP--------ASAGGGGGGGG-------GGGGGGAAGAGGALHPHHAA 252 + GG GG G GG +S+GGGGGGG GGG G GG ++ Sbjct: 14 SGGGGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSY 73 Query: 253 GG 254 GG Sbjct: 74 GG 75 Score = 29.6 bits (65), Expect = 4.6 Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 12/44 (27%) Query: 223 SAGGGGGGGGGGGGG------------GAAGAGGALHPHHAAGG 254 S GGGGGGG G GG G G GG GG Sbjct: 12 SRSGGGGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGG 55 >gi|154355000 KH-type splicing regulatory protein [Homo sapiens] Length = 711 Score = 61.2 bits (147), Expect = 1e-09 Identities = 34/73 (46%), Positives = 36/73 (49%), Gaps = 3/73 (4%) Query: 194 HPTAGAPGAAGSAAASAGGAGGAGGG---GPASAGGGGGGGGGGGGGGAAGAGGALHPHH 250 + T G P A GGAGGAGGG GP AG GGGG GGGG G AGG P Sbjct: 4 YSTGGPPPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPG 63 Query: 251 AAGGLHFDDRFSD 263 G D F+D Sbjct: 64 GGGPGIRKDAFAD 76 Score = 38.9 bits (89), Expect = 0.008 Identities = 20/46 (43%), Positives = 21/46 (45%), Gaps = 2/46 (4%) Query: 188 AAGHHHHPTAGAPGAA--GSAAASAGGAGGAGGGGPASAGGGGGGG 231 A G P G PGA G GG GG GGP+ GGGG G Sbjct: 23 AGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPGGGGPG 68 >gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens] Length = 532 Score = 61.2 bits (147), Expect = 1e-09 Identities = 32/63 (50%), Positives = 35/63 (55%), Gaps = 12/63 (19%) Query: 195 PTAGAPGAAGSAAASA------------GGAGGAGGGGPASAGGGGGGGGGGGGGGAAGA 242 P A A AA +AAA+A GGAGG GGG S GGGGG GGGGGG G+ Sbjct: 455 PAAAAAAAAAAAAAAAVSAVHRGGGSGSGGAGGGSGGGSGSGGGGGGAGGGGGGSSGGGS 514 Query: 243 GGA 245 G A Sbjct: 515 GTA 517 Score = 58.5 bits (140), Expect = 9e-09 Identities = 37/89 (41%), Positives = 43/89 (48%), Gaps = 15/89 (16%) Query: 153 SGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGG 212 S + PAAA +A AAAAA A H G + GA G +G + S GG Sbjct: 449 SSSNLSPAAAAAAAAAAAAAAAVSAV-------HRGGGSG---SGGAGGGSGGGSGSGGG 498 Query: 213 AGGAGGGGPASAGGGGGGGGGGGGGGAAG 241 GGAGGGG GG GGG G GG +G Sbjct: 499 GGGAGGGG-----GGSSGGGSGTAGGHSG 522 Score = 46.2 bits (108), Expect = 5e-05 Identities = 35/105 (33%), Positives = 39/105 (37%), Gaps = 39/105 (37%) Query: 132 ARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHHHAAGH 191 A A AAAA A A G G SG+G Sbjct: 457 AAAAAAAAAAAAAAVSAVHRGGG--------------------SGSG------------- 483 Query: 192 HHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGG 236 GA G +G + S GG GGAGGGG S+GGG G GG G Sbjct: 484 ------GAGGGSGGGSGSGGGGGGAGGGGGGSSGGGSGTAGGHSG 522 Score = 41.6 bits (96), Expect = 0.001 Identities = 55/193 (28%), Positives = 72/193 (37%), Gaps = 24/193 (12%) Query: 127 GFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHH 186 G +AR AAAA A A E+ AAA + + +AAA GA H Sbjct: 13 GVGSFARHHHHSAAAAAAAAAEM---QDRELSLAAAQ-NGFVDSAAAHMGAFKLNPGAHE 68 Query: 187 HAAGHHHHPTAGAPGAAGSAAASAGGAGGAG---------GGGPASAG----------GG 227 + G T+ PGA +AA+A A G G P ++ G Sbjct: 69 LSPGQSSAFTSQGPGAYPGSAAAAAAAAALGPHAAHVGSYSGPPFNSTRDFLFRSRGFGD 128 Query: 228 GGGGGGGGGGGAAGAGGALHPHHAAGGLHFDDRFSDEQLVTMSVRELNRQLR-GVSKEEV 286 GGG G GAGG H H A G ++ S LN Q+R G+ E Sbjct: 129 SAPGGGQHGLFGPGAGGLHHAHSDAQGHLLFPGLPEQHGPHGSQNVLNGQMRLGLPGEVF 188 Query: 287 IRLKQKRRTLKNR 299 R +Q R+ R Sbjct: 189 GRSEQYRQVASPR 201 Score = 41.6 bits (96), Expect = 0.001 Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 4/47 (8%) Query: 199 APGAAGSAAASAGGAGGAGGGGPASAGGGGGGGG-GGGGGGAAGAGG 244 +P AA +AAA+A A GGG G GG GGG GG +G+GG Sbjct: 454 SPAAAAAAAAAAAAAAAVSA---VHRGGGSGSGGAGGGSGGGSGSGG 497 Score = 36.2 bits (82), Expect = 0.049 Identities = 34/134 (25%), Positives = 49/134 (36%), Gaps = 22/134 (16%) Query: 66 SVPPSPSFSAPSPGSGSEQKAH--LEDYYWMTGYPQQLNPEALGFSPEDAVEALISNSHQ 123 S P PG+G AH + + G P+Q P + +++ + Sbjct: 129 SAPGGGQHGLFGPGAGGLHHAHSDAQGHLLFPGLPEQHGPHGS--------QNVLNGQMR 180 Query: 124 LQGGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHH 183 L + + R Q A+ S + GP + +AAAAA H Sbjct: 181 LGLPGEVFGRSEQYRQVASPRTDPYSAAQLHNQYGPMNMNMGMNMAAAAA---------H 231 Query: 184 HHHHAAGHHHHPTA 197 HHHH HHHHP A Sbjct: 232 HHHH---HHHHPGA 242 Score = 33.5 bits (75), Expect = 0.32 Identities = 16/51 (31%), Positives = 23/51 (45%) Query: 195 PTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGA 245 P+A ++ + A+A A A A + GGG G GG G GG+ Sbjct: 443 PSAEPQSSSNLSPAAAAAAAAAAAAAAAVSAVHRGGGSGSGGAGGGSGGGS 493 Score = 33.5 bits (75), Expect = 0.32 Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 2/50 (4%) Query: 205 SAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGG 254 S AA+A A A SA GGG G GG G G+GG GG Sbjct: 454 SPAAAAAAAAAAAAAAAVSAVHRGGGSGSGGAG--GGSGGGSGSGGGGGG 501 Score = 30.8 bits (68), Expect = 2.1 Identities = 17/60 (28%), Positives = 25/60 (41%) Query: 195 PTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGG 254 P +P A ++++ A A A+A GGG G+ GAGG +GG Sbjct: 438 PGLVSPSAEPQSSSNLSPAAAAAAAAAAAAAAAVSAVHRGGGSGSGGAGGGSGGGSGSGG 497 Score = 30.4 bits (67), Expect = 2.7 Identities = 31/110 (28%), Positives = 38/110 (34%), Gaps = 24/110 (21%) Query: 177 AGPHYHHHHHHAAGHHHHPTAGAPGAAGS---------AAASAGGAGGAG---------- 217 AGP + + HHH +A A AA + AAA G A Sbjct: 5 AGPQFPAIGVGSFARHHHHSAAAAAAAAAEMQDRELSLAAAQNGFVDSAAAHMGAFKLNP 64 Query: 218 -----GGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGGLHFDDRFS 262 G +SA G G G AA A AL PH A G + F+ Sbjct: 65 GAHELSPGQSSAFTSQGPGAYPGSAAAAAAAAALGPHAAHVGSYSGPPFN 114 >gi|5902724 neuro-oncological ventral antigen 2 [Homo sapiens] Length = 492 Score = 61.2 bits (147), Expect = 1e-09 Identities = 72/247 (29%), Positives = 104/247 (42%), Gaps = 43/247 (17%) Query: 35 EPVETDRIISQCGRL----IAGGSLSSTPMSTPCSS---VPPSPSFSAPSPGSGSEQKAH 87 + V+ D S C + +AG +S P +P +S V P+ + ++ + SG A Sbjct: 198 QKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASGLLGPAG 257 Query: 88 LEDYYWMTGYPQQLNPEALGFSPEDAVEALISNSHQLQGGFDGYARGAQQLAAAAGAGAG 147 L + +P L FS D + + + G++ + G +AAA Sbjct: 258 LAG---VGAFPAALP----AFSGTDLLAISTALNTLASYGYNTNSLGLGLNSAAASGVLA 310 Query: 148 ASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHPTAGAPGAAGSAA 207 A G+ PAAA + ++A+ A ++GAGP AG P PGA GS A Sbjct: 311 AVAAGAN----PAAAAAANLLASYAGEAGAGP---------AGGAAPPPPPPPGALGSFA 357 Query: 208 ASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGGLHFDDRFSDEQLV 267 +A G G G GGG GGGGG AA A G AAGG + E+L Sbjct: 358 LAAAANGYLGAGA-----GGGAGGGGGPLVAAAAAAG------AAGGF-----LTAEKLA 401 Query: 268 TMSVREL 274 S +EL Sbjct: 402 AESAKEL 408 >gi|89145413 short stature homeobox 2 isoform a [Homo sapiens] Length = 331 Score = 60.8 bits (146), Expect = 2e-09 Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 8/101 (7%) Query: 197 AGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHA--AGG 254 AG + A +AGG GG GGGG GGGGGGGG GGGG GAGG P G Sbjct: 46 AGRDDRSSPAVRAAGGGGGGGGGG----GGGGGGGGVGGGGAGGGAGGGRSPVRELDMGA 101 Query: 255 LHFDDRFSDEQLVTMS--VRELNRQLRGVSKEEVIRLKQKR 293 +L +S +++ +G+ E ++KQ+R Sbjct: 102 AERSREPGSPRLTEVSPELKDRKEDAKGMEDEGQTKIKQRR 142 Score = 51.2 bits (121), Expect = 1e-06 Identities = 45/130 (34%), Positives = 61/130 (46%), Gaps = 18/130 (13%) Query: 203 AGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGGLHFDDRFS 262 AG S+ AGGGG GGGGGGGGGGGGG G GGA AGG R Sbjct: 46 AGRDDRSSPAVRAAGGGG-----GGGGGGGGGGGGGGVGGGGA---GGGAGGGRSPVREL 97 Query: 263 DEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHVLESEKNQ 322 D S + +L VS E R K+ + +++ G +++QR S N Sbjct: 98 DMGAAERSREPGSPRLTEVSPELKDR-KEDAKGMEDEGQT------KIKQR---RSRTNF 147 Query: 323 LLQQVDHLKQ 332 L+Q++ L++ Sbjct: 148 TLEQLNELER 157 Score = 29.3 bits (64), Expect = 6.0 Identities = 14/33 (42%), Positives = 14/33 (42%) Query: 188 AAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGG 220 AAG G G G GGAGG GGG Sbjct: 58 AAGGGGGGGGGGGGGGGGGGVGGGGAGGGAGGG 90 >gi|119395750 keratin 1 [Homo sapiens] Length = 644 Score = 59.7 bits (143), Expect = 4e-09 Identities = 63/239 (26%), Positives = 90/239 (37%), Gaps = 35/239 (14%) Query: 140 AAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHPTAGA 199 + G G +S GG G G S + +G G Sbjct: 39 SGGGGGRFSSCGGGGGSFGAGGGFGSRSLVNLGGSKSISISVARGGGRGSGFGGGYGGGG 98 Query: 200 PGAAGSAAAS--AGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGGLHF 257 G G GG GG G GG S GGG GGGG GGGG G G P GG+ Sbjct: 99 FGGGGFGGGGFGGGGIGGGGFGGFGSGGGGFGGGGFGGGGYGGGYGPVCPP----GGIQ- 153 Query: 258 DDRFSDEQLVTMSVRELNRQLRGVSKEEVIRLK----------QKRRTLKNRGYAQSCRF 307 + + L ++V E++ +++ V E ++K K R L+ + ++ Sbjct: 154 EVTINQSLLQPLNV-EIDPEIQKVKSREREQIKSLNNQFASFIDKVRFLEQQNQVLQTKW 212 Query: 308 KRVQQ----------RHVLESEKNQLLQQVDHLKQEISRLVRER-------DAYKEKYE 349 + +QQ ES N L ++VD LK + SRL E + Y+ KYE Sbjct: 213 ELLQQVDTSTRTHNLEPYFESFINNLRRRVDQLKSDQSRLDSELKNMQDMVEDYRNKYE 271 Score = 57.8 bits (138), Expect = 2e-08 Identities = 40/143 (27%), Positives = 56/143 (39%), Gaps = 23/143 (16%) Query: 118 ISNSHQLQGGFDGYARGAQQLAAAAGA-GAGASLGGSGEEMGPAAAVVSAVIAAAAAQSG 176 IS GG GY G + G+ G+G GG G + + + + G Sbjct: 512 ISGGGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGSYGSGGG 571 Query: 177 AGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGG 236 G H G+ GS ++S G GG+GGGG S+GG G GGG GG Sbjct: 572 GGGH--------------------GSYGSGSSSGGYRGGSGGGGGGSSGGRGSGGGSSGG 611 Query: 237 --GGAAGAGGALHPHHAAGGLHF 257 GG + G + + + F Sbjct: 612 SIGGRGSSSGGVKSSGGSSSVKF 634 Score = 51.2 bits (121), Expect = 1e-06 Identities = 26/67 (38%), Positives = 31/67 (46%), Gaps = 4/67 (5%) Query: 194 HPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGG----GGGGGAAGAGGALHPH 249 H T G+ G G G + G G S G GGGGGGG G GG + G+GG + Sbjct: 509 HTTISGGGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGSYGS 568 Query: 250 HAAGGLH 256 GG H Sbjct: 569 GGGGGGH 575 Score = 47.8 bits (112), Expect = 2e-05 Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 5/65 (7%) Query: 195 PTAGAPGAAGSAAASAGGAGGAGGGGPASAG-----GGGGGGGGGGGGGAAGAGGALHPH 249 P + S GG+ G GGGG S G GGG G GGGGGG G+ G+ Sbjct: 499 PNVSVSVSTSHTTISGGGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGGRGSYGSGGSS 558 Query: 250 HAAGG 254 + +GG Sbjct: 559 YGSGG 563 Score = 37.4 bits (85), Expect = 0.022 Identities = 18/46 (39%), Positives = 22/46 (47%) Query: 199 APGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGG 244 AP + S + S G G G G G GG G GGG+ G+GG Sbjct: 498 APNVSVSVSTSHTTISGGGSRGGGGGGYGSGGSSYGSGGGSYGSGG 543 Score = 36.2 bits (82), Expect = 0.049 Identities = 19/54 (35%), Positives = 26/54 (48%) Query: 186 HHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGA 239 + + G +AG +S+ G GGG +S GGGGG G GGG G+ Sbjct: 11 YRSGGGFSSGSAGIINYQRRTTSSSTRRSGGGGGRFSSCGGGGGSFGAGGGFGS 64 Score = 29.3 bits (64), Expect = 6.0 Identities = 14/47 (29%), Positives = 20/47 (42%) Query: 196 TAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGA 242 ++G+ G + + GGG GGGGG G GG G+ Sbjct: 18 SSGSAGIINYQRRTTSSSTRRSGGGGGRFSSCGGGGGSFGAGGGFGS 64 >gi|4885597 sine oculis homeobox homolog 3 [Homo sapiens] Length = 332 Score = 59.7 bits (143), Expect = 4e-09 Identities = 26/51 (50%), Positives = 29/51 (56%) Query: 189 AGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGA 239 A HH A G+ A GGAGG GGG + GGG GG GGGGGGG+ Sbjct: 20 ADSHHRSILLASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGS 70 Score = 58.2 bits (139), Expect = 1e-08 Identities = 25/37 (67%), Positives = 26/37 (70%) Query: 208 ASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGG 244 AS+GG GAGGGG A G GGG G GGGG G AG GG Sbjct: 30 ASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGG 66 Score = 43.1 bits (100), Expect = 4e-04 Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 6/56 (10%) Query: 179 PHYHHHHHHA---AGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGG 231 P++ HH + A AG G AG + GAGG G GG AGGGGGGG Sbjct: 17 PNFADSHHRSILLASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGG---AGGGGGGG 69 >gi|4502565 calpain, small subunit 1 [Homo sapiens] Length = 268 Score = 58.2 bits (139), Expect = 1e-08 Identities = 26/47 (55%), Positives = 27/47 (57%) Query: 198 GAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGG 244 G G G GG G GG + AGGGGGGGGGGGGGG G GG Sbjct: 10 GGGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGGGGG 56 Score = 31.6 bits (70), Expect = 1.2 Identities = 32/119 (26%), Positives = 44/119 (36%), Gaps = 16/119 (13%) Query: 197 AGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGGLH 256 +GA G G GG GG GGG GG + A +P H Sbjct: 34 SGAGGGGGGGGGGGGGGGGGGGGTAMRI-------LGGVISAISEAAAQYNPEPPPPRTH 86 Query: 257 FDDRFSDEQLVTMSVRELNRQLRG----VSKEEVIRLKQKRRT----LKNRGYA-QSCR 306 + + ++E R L QL G VS E++ + K T LK G+ +CR Sbjct: 87 YSNIEANESEEVRQFRRLFAQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCR 145 >gi|51599151 calpain, small subunit 1 [Homo sapiens] Length = 268 Score = 58.2 bits (139), Expect = 1e-08 Identities = 26/47 (55%), Positives = 27/47 (57%) Query: 198 GAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGG 244 G G G GG G GG + AGGGGGGGGGGGGGG G GG Sbjct: 10 GGGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGGGGG 56 Score = 31.6 bits (70), Expect = 1.2 Identities = 32/119 (26%), Positives = 44/119 (36%), Gaps = 16/119 (13%) Query: 197 AGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGGLH 256 +GA G G GG GG GGG GG + A +P H Sbjct: 34 SGAGGGGGGGGGGGGGGGGGGGGTAMRI-------LGGVISAISEAAAQYNPEPPPPRTH 86 Query: 257 FDDRFSDEQLVTMSVRELNRQLRG----VSKEEVIRLKQKRRT----LKNRGYA-QSCR 306 + + ++E R L QL G VS E++ + K T LK G+ +CR Sbjct: 87 YSNIEANESEEVRQFRRLFAQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCR 145 >gi|40288197 GATA binding protein 6 [Homo sapiens] Length = 595 Score = 57.8 bits (138), Expect = 2e-08 Identities = 67/255 (26%), Positives = 91/255 (35%), Gaps = 46/255 (18%) Query: 37 VETDRIISQCGRLIAGGSLSSTPMSTPCSSVPPSPSFSAPSPGSGS----------EQKA 86 ++T+ R + S +S P P P +P + P S +Q A Sbjct: 65 LDTEAAAGPPARSLLLSSYASHPFGAPHG--PSAPGVAGPGGNLSSWEDLLLFTDLDQAA 122 Query: 87 HLEDYYWMTGYPQQLNPEALGFSPEDAVEALISNSHQLQGGFDGYARGAQQLAAAAGAGA 146 W + +L+P A PE+ + L + S Q +DG G AAAA A A Sbjct: 123 TASKLLW-SSRGAKLSPFAPE-QPEEMYQTLAALSSQGPAAYDGAPGGFVHSAAAAAAAA 180 Query: 147 GASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHPTAGAP------ 200 A+ S P V S + G+G +H A H P A A Sbjct: 181 AAA---SSPVYVPTTRVGSMLPGLPYHLQGSGSGPANHAGGAGAHPGWPQASADSPPYGS 237 Query: 201 --GAAGSAAASAGGAGGAGGG---------------------GPASAGGGGGGGGGGGGG 237 GAAG AA GGAG A G +A G GG GG GGG Sbjct: 238 GGGAAGGGAAGPGGAGSAAAHVSARFPYSPSPPMANGAAREPGGYAAAGSGGAGGVSGGG 297 Query: 238 GAAGAGGALHPHHAA 252 + A G P +++ Sbjct: 298 SSLAAMGGREPQYSS 312 Score = 47.4 bits (111), Expect = 2e-05 Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 6/74 (8%) Query: 140 AAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHPTAGA 199 AAAG+G + G G + + +AA+ G ++HHHHH HHHHP+ + Sbjct: 283 AAAGSGGAGGVSGGGSSLAAMGGREPQYSSLSAARPLNGTYHHHHHH----HHHHPSPYS 338 Query: 200 P--GAAGSAAASAG 211 P GA + A AG Sbjct: 339 PYVGAPLTPAWPAG 352 Score = 42.4 bits (98), Expect = 7e-04 Identities = 27/74 (36%), Positives = 33/74 (44%), Gaps = 4/74 (5%) Query: 129 DGYARGAQQLAAAAGAGAGASLGGSGE--EMGPAAAVVSAVIAAAAAQSGAGPHYHHHHH 186 +G AR AAA GAG GG MG S++ AA H+HHHHH Sbjct: 273 NGAAREPGGYAAAGSGGAGGVSGGGSSLAAMGGREPQYSSLSAARPLNGTYHHHHHHHHH 332 Query: 187 HAAGHHHHPTAGAP 200 H + + P GAP Sbjct: 333 HPS--PYSPYVGAP 344 Score = 40.0 bits (92), Expect = 0.003 Identities = 43/129 (33%), Positives = 50/129 (38%), Gaps = 17/129 (13%) Query: 136 QQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHHHAA---GHH 192 Q LAA + G A G P V SA AAAAA + + P Y + G Sbjct: 149 QTLAALSSQGPAAYDGA------PGGFVHSAAAAAAAAAAASSPVYVPTTRVGSMLPGLP 202 Query: 193 HHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAA 252 +H G+ A AGGAG G ASA G GGG AAG G A + Sbjct: 203 YH----LQGSGSGPANHAGGAGAHPGWPQASADSPPYGSGGG----AAGGGAAGPGGAGS 254 Query: 253 GGLHFDDRF 261 H RF Sbjct: 255 AAAHVSARF 263 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.311 0.130 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 17,091,458 Number of Sequences: 37866 Number of extensions: 1026839 Number of successful extensions: 50031 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 987 Number of HSP's successfully gapped in prelim test: 574 Number of HSP's that attempted gapping in prelim test: 13872 Number of HSP's gapped (non-prelim): 14110 length of query: 373 length of database: 18,247,518 effective HSP length: 104 effective length of query: 269 effective length of database: 14,309,454 effective search space: 3849243126 effective search space used: 3849243126 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.