Guide to the Human Genome
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Search of human proteins with 73427806

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene
homolog isoform b [Homo sapiens]
         (373 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homol...   754   0.0  
gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolo...   753   0.0  
gi|23308699 transcription factor MAFB [Homo sapiens]                  331   6e-91
gi|71274111 v-maf musculoaponeurotic fibrosarcoma oncogene homol...   272   3e-73
gi|5453802 neural retina leucine zipper [Homo sapiens]                127   1e-29
gi|4505073 v-maf musculoaponeurotic fibrosarcoma oncogene homolo...   109   5e-24
gi|49619228 v-maf musculoaponeurotic fibrosarcoma oncogene homol...   109   5e-24
gi|4505075 v-maf musculoaponeurotic fibrosarcoma oncogene homolo...   106   3e-23
gi|239048388 transcription factor MAFF isoform a [Homo sapiens]       100   2e-21
gi|239048350 transcription factor MAFF isoform a [Homo sapiens]       100   2e-21
gi|6912490 transcription factor MAFF isoform a [Homo sapiens]         100   2e-21
gi|239048390 transcription factor MAFF isoform b [Homo sapiens]        94   2e-19
gi|110347449 POU domain, class 4, transcription factor 1 [Homo s...    80   3e-15
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ...    75   1e-13
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ...    75   1e-13
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ...    75   1e-13
gi|122937319 even-skipped homeobox 2 [Homo sapiens]                    69   9e-12
gi|21322252 androgen receptor isoform 1 [Homo sapiens]                 65   1e-10
gi|109148552 keratin 3 [Homo sapiens]                                  64   3e-10
gi|238859557 regulatory factor X1 [Homo sapiens]                       63   4e-10
gi|55956899 keratin 9 [Homo sapiens]                                   62   8e-10
gi|154355000 KH-type splicing regulatory protein [Homo sapiens]        61   1e-09
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]     61   1e-09
gi|5902724 neuro-oncological ventral antigen 2 [Homo sapiens]          61   1e-09
gi|89145413 short stature homeobox 2 isoform a [Homo sapiens]          61   2e-09
gi|119395750 keratin 1 [Homo sapiens]                                  60   4e-09
gi|4885597 sine oculis homeobox homolog 3 [Homo sapiens]               60   4e-09
gi|4502565 calpain, small subunit 1 [Homo sapiens]                     58   1e-08
gi|51599151 calpain, small subunit 1 [Homo sapiens]                    58   1e-08
gi|40288197 GATA binding protein 6 [Homo sapiens]                      58   2e-08

>gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
           isoform b [Homo sapiens]
          Length = 373

 Score =  754 bits (1948), Expect = 0.0
 Identities = 373/373 (100%), Positives = 373/373 (100%)

Query: 1   MASELAMSNSDLPTSPLAMEYVNDFDLMKFEVKKEPVETDRIISQCGRLIAGGSLSSTPM 60
           MASELAMSNSDLPTSPLAMEYVNDFDLMKFEVKKEPVETDRIISQCGRLIAGGSLSSTPM
Sbjct: 1   MASELAMSNSDLPTSPLAMEYVNDFDLMKFEVKKEPVETDRIISQCGRLIAGGSLSSTPM 60

Query: 61  STPCSSVPPSPSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEALGFSPEDAVEALISN 120
           STPCSSVPPSPSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEALGFSPEDAVEALISN
Sbjct: 61  STPCSSVPPSPSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEALGFSPEDAVEALISN 120

Query: 121 SHQLQGGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPH 180
           SHQLQGGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPH
Sbjct: 121 SHQLQGGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPH 180

Query: 181 YHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAA 240
           YHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAA
Sbjct: 181 YHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAA 240

Query: 241 GAGGALHPHHAAGGLHFDDRFSDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRG 300
           GAGGALHPHHAAGGLHFDDRFSDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRG
Sbjct: 241 GAGGALHPHHAAGGLHFDDRFSDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRG 300

Query: 301 YAQSCRFKRVQQRHVLESEKNQLLQQVDHLKQEISRLVRERDAYKEKYEKLVSSGFRENG 360
           YAQSCRFKRVQQRHVLESEKNQLLQQVDHLKQEISRLVRERDAYKEKYEKLVSSGFRENG
Sbjct: 301 YAQSCRFKRVQQRHVLESEKNQLLQQVDHLKQEISRLVRERDAYKEKYEKLVSSGFRENG 360

Query: 361 SSSDNPSSPEFFM 373
           SSSDNPSSPEFFM
Sbjct: 361 SSSDNPSSPEFFM 373


>gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
           isoform a [Homo sapiens]
          Length = 403

 Score =  753 bits (1944), Expect = 0.0
 Identities = 372/373 (99%), Positives = 373/373 (100%)

Query: 1   MASELAMSNSDLPTSPLAMEYVNDFDLMKFEVKKEPVETDRIISQCGRLIAGGSLSSTPM 60
           MASELAMSNSDLPTSPLAMEYVNDFDLMKFEVKKEPVETDRIISQCGRLIAGGSLSSTPM
Sbjct: 1   MASELAMSNSDLPTSPLAMEYVNDFDLMKFEVKKEPVETDRIISQCGRLIAGGSLSSTPM 60

Query: 61  STPCSSVPPSPSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEALGFSPEDAVEALISN 120
           STPCSSVPPSPSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEALGFSPEDAVEALISN
Sbjct: 61  STPCSSVPPSPSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEALGFSPEDAVEALISN 120

Query: 121 SHQLQGGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPH 180
           SHQLQGGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPH
Sbjct: 121 SHQLQGGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPH 180

Query: 181 YHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAA 240
           YHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAA
Sbjct: 181 YHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAA 240

Query: 241 GAGGALHPHHAAGGLHFDDRFSDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRG 300
           GAGGALHPHHAAGGLHFDDRFSDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRG
Sbjct: 241 GAGGALHPHHAAGGLHFDDRFSDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRG 300

Query: 301 YAQSCRFKRVQQRHVLESEKNQLLQQVDHLKQEISRLVRERDAYKEKYEKLVSSGFRENG 360
           YAQSCRFKRVQQRHVLESEKNQLLQQVDHLKQEISRLVRERDAYKEKYEKLVSSGFRENG
Sbjct: 301 YAQSCRFKRVQQRHVLESEKNQLLQQVDHLKQEISRLVRERDAYKEKYEKLVSSGFRENG 360

Query: 361 SSSDNPSSPEFFM 373
           SSSDNPSSPEFF+
Sbjct: 361 SSSDNPSSPEFFI 373


>gi|23308699 transcription factor MAFB [Homo sapiens]
          Length = 323

 Score =  331 bits (849), Expect = 6e-91
 Identities = 201/378 (53%), Positives = 234/378 (61%), Gaps = 60/378 (15%)

Query: 1   MASELAMSNSDLPTSPLAMEYVNDFDLMKFEVKKEPV-ETDRIISQCGRLIAGGSLSSTP 59
           MA+EL+M   +LPTSPLAMEYVNDFDL+KF+VKKEP+   +R    C RL   GS+SSTP
Sbjct: 1   MAAELSMG-PELPTSPLAMEYVNDFDLLKFDVKKEPLGRAERPGRPCTRLQPAGSVSSTP 59

Query: 60  MSTPCSSVPPSPSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEALGFSPEDAVEALIS 119
           +STPCSSVP SPSFS       +EQK HLED YWM    QQ+NPEAL  +PEDAVEALI 
Sbjct: 60  LSTPCSSVPSSPSFSP------TEQKTHLEDLYWMASNYQQMNPEALNLTPEDAVEALI- 112

Query: 120 NSH---QLQGGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSG 176
            SH   Q    FD + RGA             +  G+G                  A   
Sbjct: 113 GSHPVPQPLQSFDSF-RGAHHHHHHHHPHPHHAYPGAG-----------------VAHDE 154

Query: 177 AGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGA-GGAGGGGPASAGGGGGGGGGGG 235
            GPH H HH     HHHH  +  P +A S A     +  G G    ASA   GG G    
Sbjct: 155 LGPHAHPHH-----HHHHQASPPPSSAASPAQQLPTSHPGPGPHATASATAAGGNGS--- 206

Query: 236 GGGAAGAGGALHPHHAAGGLHFDDRFSDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRT 295
                                 +DRFSD+QLV+MSVRELNR LRG +K+EVIRLKQKRRT
Sbjct: 207 ---------------------VEDRFSDDQLVSMSVRELNRHLRGFTKDEVIRLKQKRRT 245

Query: 296 LKNRGYAQSCRFKRVQQRHVLESEKNQLLQQVDHLKQEISRLVRERDAYKEKYEKLVSSG 355
           LKNRGYAQSCR+KRVQQ+H LE+EK QL+QQV+ LKQE+SRL RERDAYK K EKL +SG
Sbjct: 246 LKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKCEKLANSG 305

Query: 356 FRENGSSSDNPSSPEFFM 373
           FRE GS+SD+PSSPEFF+
Sbjct: 306 FREAGSTSDSPSSPEFFL 323


>gi|71274111 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
           A [Homo sapiens]
          Length = 353

 Score =  272 bits (696), Expect = 3e-73
 Identities = 185/396 (46%), Positives = 212/396 (53%), Gaps = 88/396 (22%)

Query: 1   MASELAMSNSDLPTSPLAMEYVNDFDLMKFEVKKEPVETDRIISQCGRLIAGGSLSSTPM 60
           MA+ELAM  ++LP+SPLA+EYVNDFDLMKFEVKKEP E +R    C RL   GSLSSTP+
Sbjct: 1   MAAELAMG-AELPSSPLAIEYVNDFDLMKFEVKKEPPEAERF---CHRL-PPGSLSSTPL 55

Query: 61  STPCSSVPPSPSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEALGFSPEDAVEALISN 120
           STPCSSVP SPSF APSPG+G                                       
Sbjct: 56  STPCSSVPSSPSFCAPSPGTGG-------------------------------------- 77

Query: 121 SHQLQGGFDGYARGAQQLAAAAG---AGAGASLGGSGE--------------EMGPAAAV 163
                GG  G   G+ Q   A G    G GA  G SG+               + P A  
Sbjct: 78  -----GGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSGKPALEDLYWMSGYQHHLNPEALN 132

Query: 164 VSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPAS 223
           ++   A  A   G+G   HH  HH A   HHP      AA +A  +  G G AGGGG   
Sbjct: 133 LTPEDAVEAL-IGSG---HHGAHHGA---HHP------AAAAAYEAFRGPGFAGGGGADD 179

Query: 224 AGGGGGGGGGGGGGGAAGAGGALHPHHAAGG----------LHFDDRFSDEQLVTMSVRE 273
            G G   G          A    H HH  GG          +  ++RFSD+QLV+MSVRE
Sbjct: 180 MGAGHHHGAHHAAHHHHAAHHHHHHHHHHGGAGHGGGAGHHVRLEERFSDDQLVSMSVRE 239

Query: 274 LNRQLRGVSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHVLESEKNQLLQQVDHLKQE 333
           LNRQLRG SKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRH+LESEK QL  QV+ LK E
Sbjct: 240 LNRQLRGFSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHILESEKCQLQSQVEQLKLE 299

Query: 334 ISRLVRERDAYKEKYEKLVSSGFRENGSSSDNPSSP 369
           + RL +ERD YKEKYEKL   G   +   +  P  P
Sbjct: 300 VGRLAKERDLYKEKYEKLAGRGGPGSAGGAGFPREP 335


>gi|5453802 neural retina leucine zipper [Homo sapiens]
          Length = 237

 Score =  127 bits (320), Expect = 1e-29
 Identities = 73/144 (50%), Positives = 92/144 (63%)

Query: 212 GAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGGLHFDDRFSDEQLVTMSV 271
           GAG A G  P  A     G G     G  G          A  +   +RFSD  LV+MSV
Sbjct: 83  GAGEALGLSPEEAMELLQGQGPVPVDGPHGYYPGSPEETGAQHVQLAERFSDAALVSMSV 142

Query: 272 RELNRQLRGVSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHVLESEKNQLLQQVDHLK 331
           RELNRQLRG  ++E +RLKQ+RRTLKNRGYAQ+CR KR+QQR  LE+E+ +L  Q+D L+
Sbjct: 143 RELNRQLRGCGRDEALRLKQRRRTLKNRGYAQACRSKRLQQRRGLEAERARLAAQLDALR 202

Query: 332 QEISRLVRERDAYKEKYEKLVSSG 355
            E++RL RERD YK + ++L SSG
Sbjct: 203 AEVARLARERDLYKARCDRLTSSG 226



 Score = 96.3 bits (238), Expect = 4e-20
 Identities = 63/132 (47%), Positives = 76/132 (57%), Gaps = 13/132 (9%)

Query: 12  LPTSPLAMEYVNDFDLMKFEVKKEPVETDRIISQCGRLIAGGSLSSTPMSTPCSSVPPSP 71
           LP SPLAMEYVNDFDLMKFEVK+EP E        GR    G  +++  STP SSVPPSP
Sbjct: 3   LPPSPLAMEYVNDFDLMKFEVKREPSE--------GR---PGPPTASLGSTPYSSVPPSP 51

Query: 72  SFSAPS-PGSGSEQKAHLEDYYWMTGYPQQLNP-EALGFSPEDAVEALISNSHQLQGGFD 129
           +FS P   G+    +  LE+ YW+    QQL   EALG SPE+A+E L         G  
Sbjct: 52  TFSEPGMVGATEGTRPGLEELYWLATLQQQLGAGEALGLSPEEAMELLQGQGPVPVDGPH 111

Query: 130 GYARGAQQLAAA 141
           GY  G+ +   A
Sbjct: 112 GYYPGSPEETGA 123


>gi|4505073 v-maf musculoaponeurotic fibrosarcoma oncogene homolog G
           [Homo sapiens]
          Length = 162

 Score =  109 bits (272), Expect = 5e-24
 Identities = 54/90 (60%), Positives = 70/90 (77%)

Query: 262 SDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHVLESEKN 321
           +DE+LVTMSVRELN+ LRG+SKEE+++LKQ+RRTLKNRGYA SCR KRV Q+  LE +K 
Sbjct: 25  TDEELVTMSVRELNQHLRGLSKEEIVQLKQRRRTLKNRGYAASCRVKRVTQKEELEKQKA 84

Query: 322 QLLQQVDHLKQEISRLVRERDAYKEKYEKL 351
           +L Q+V+ L  E + +  E DA + KYE L
Sbjct: 85  ELQQEVEKLASENASMKLELDALRSKYEAL 114


>gi|49619228 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
           G [Homo sapiens]
          Length = 162

 Score =  109 bits (272), Expect = 5e-24
 Identities = 54/90 (60%), Positives = 70/90 (77%)

Query: 262 SDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHVLESEKN 321
           +DE+LVTMSVRELN+ LRG+SKEE+++LKQ+RRTLKNRGYA SCR KRV Q+  LE +K 
Sbjct: 25  TDEELVTMSVRELNQHLRGLSKEEIVQLKQRRRTLKNRGYAASCRVKRVTQKEELEKQKA 84

Query: 322 QLLQQVDHLKQEISRLVRERDAYKEKYEKL 351
           +L Q+V+ L  E + +  E DA + KYE L
Sbjct: 85  ELQQEVEKLASENASMKLELDALRSKYEAL 114


>gi|4505075 v-maf musculoaponeurotic fibrosarcoma oncogene homolog K
           [Homo sapiens]
          Length = 156

 Score =  106 bits (265), Expect = 3e-23
 Identities = 54/90 (60%), Positives = 70/90 (77%)

Query: 262 SDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHVLESEKN 321
           SD++LV+MSVRELN+ LRG++KEEV RLKQ+RRTLKNRGYA SCR KRV Q+  LE ++ 
Sbjct: 25  SDDELVSMSVRELNQHLRGLTKEEVTRLKQRRRTLKNRGYAASCRIKRVTQKEELERQRV 84

Query: 322 QLLQQVDHLKQEISRLVRERDAYKEKYEKL 351
           +L Q+V+ L +E S +  E DA + KYE L
Sbjct: 85  ELQQEVEKLARENSSMRLELDALRSKYEAL 114


>gi|239048388 transcription factor MAFF isoform a [Homo sapiens]
          Length = 164

 Score =  100 bits (250), Expect = 2e-21
 Identities = 55/107 (51%), Positives = 76/107 (71%), Gaps = 2/107 (1%)

Query: 262 SDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHVLESEKN 321
           SDE L+ +SVRELNR LRG+S EEV RLKQ+RRTLKNRGYA SCR KRV Q+  L+ +K+
Sbjct: 25  SDEALMGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKS 84

Query: 322 QLLQQVDHLKQEISRLVRERDAYKEKYEKLVSSGFRENGSSSDNPSS 368
           +L ++VD L +E + +  E DA + K E L   GF  + +++  P++
Sbjct: 85  ELEREVDKLARENAAMRLELDALRGKCEAL--QGFARSVAAARGPAT 129


>gi|239048350 transcription factor MAFF isoform a [Homo sapiens]
          Length = 164

 Score =  100 bits (250), Expect = 2e-21
 Identities = 55/107 (51%), Positives = 76/107 (71%), Gaps = 2/107 (1%)

Query: 262 SDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHVLESEKN 321
           SDE L+ +SVRELNR LRG+S EEV RLKQ+RRTLKNRGYA SCR KRV Q+  L+ +K+
Sbjct: 25  SDEALMGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKS 84

Query: 322 QLLQQVDHLKQEISRLVRERDAYKEKYEKLVSSGFRENGSSSDNPSS 368
           +L ++VD L +E + +  E DA + K E L   GF  + +++  P++
Sbjct: 85  ELEREVDKLARENAAMRLELDALRGKCEAL--QGFARSVAAARGPAT 129


>gi|6912490 transcription factor MAFF isoform a [Homo sapiens]
          Length = 164

 Score =  100 bits (250), Expect = 2e-21
 Identities = 55/107 (51%), Positives = 76/107 (71%), Gaps = 2/107 (1%)

Query: 262 SDEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHVLESEKN 321
           SDE L+ +SVRELNR LRG+S EEV RLKQ+RRTLKNRGYA SCR KRV Q+  L+ +K+
Sbjct: 25  SDEALMGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKS 84

Query: 322 QLLQQVDHLKQEISRLVRERDAYKEKYEKLVSSGFRENGSSSDNPSS 368
           +L ++VD L +E + +  E DA + K E L   GF  + +++  P++
Sbjct: 85  ELEREVDKLARENAAMRLELDALRGKCEAL--QGFARSVAAARGPAT 129


>gi|239048390 transcription factor MAFF isoform b [Homo sapiens]
          Length = 135

 Score = 94.4 bits (233), Expect = 2e-19
 Identities = 51/100 (51%), Positives = 71/100 (71%), Gaps = 2/100 (2%)

Query: 269 MSVRELNRQLRGVSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHVLESEKNQLLQQVD 328
           +SVRELNR LRG+S EEV RLKQ+RRTLKNRGYA SCR KRV Q+  L+ +K++L ++VD
Sbjct: 3   LSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELEREVD 62

Query: 329 HLKQEISRLVRERDAYKEKYEKLVSSGFRENGSSSDNPSS 368
            L +E + +  E DA + K E L   GF  + +++  P++
Sbjct: 63  KLARENAAMRLELDALRGKCEAL--QGFARSVAAARGPAT 100


>gi|110347449 POU domain, class 4, transcription factor 1 [Homo
           sapiens]
          Length = 419

 Score = 80.1 bits (196), Expect = 3e-15
 Identities = 44/99 (44%), Positives = 49/99 (49%), Gaps = 23/99 (23%)

Query: 180 HYHHHHHHAA-------GHHHHPTAGAPGAAGSAAASAGGAGG----AGGGGPASAGGGG 228
           H+HHHHHH A        H   P+      AG A A+AGG G      GGGGP   GG G
Sbjct: 101 HHHHHHHHQALEPGDLLDHISSPSLALMAGAGGAGAAAGGGGAHDGPGGGGGPGGGGGPG 160

Query: 229 GGGGGGGGGGAAGA---------GGALHPH---HAAGGL 255
           GG GGGGGGG  G          GG+ HPH   H+ G L
Sbjct: 161 GGPGGGGGGGPGGGGGGPGGGLLGGSAHPHPHMHSLGHL 199



 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 39/140 (27%), Positives = 45/140 (32%), Gaps = 4/140 (2%)

Query: 110 PEDAVEALISNSHQLQGGFDGYARGAQQLAAAAGAGAGASLGGSGEEMG-PAAAVVSAVI 168
           P D ++ + S S  L  G  G    A    A  G G G   GG G   G P         
Sbjct: 113 PGDLLDHISSPSLALMAGAGGAGAAAGGGGAHDGPGGGGGPGGGGGPGGGPGGGGGGGPG 172

Query: 169 AAAAAQSGA---GPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAG 225
                  G    G  + H H H+ GH  HP A A     S     G    A   G A+A 
Sbjct: 173 GGGGGPGGGLLGGSAHPHPHMHSLGHLSHPAAAAAMNMPSGLPHPGLVAAAAHHGAAAAA 232

Query: 226 GGGGGGGGGGGGGAAGAGGA 245
                G       AA   GA
Sbjct: 233 AAAAAGQVAAASAAAAVVGA 252



 Score = 38.1 bits (87), Expect = 0.013
 Identities = 35/118 (29%), Positives = 41/118 (34%), Gaps = 18/118 (15%)

Query: 121 SHQLQGGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVI------------ 168
           +H   GG  G   G        G G G   GG G   GP   ++                
Sbjct: 143 AHDGPGGGGGPGGGGGPGGGPGGGGGGGPGGGGG---GPGGGLLGGSAHPHPHMHSLGHL 199

Query: 169 ---AAAAAQSGAGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPAS 223
              AAAAA +      H     AA HH    A A  AAG  AA++  A   G  G AS
Sbjct: 200 SHPAAAAAMNMPSGLPHPGLVAAAAHHGAAAAAAAAAAGQVAAASAAAAVVGAAGLAS 257


>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
           [Homo sapiens]
          Length = 2191

 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 45/129 (34%), Positives = 56/129 (43%), Gaps = 7/129 (5%)

Query: 128 FDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGA-GPHYHHHHH 186
           F+ Y   A   +   G  AG      G +  P   ++ +  AAAA   G+  P  + H  
Sbjct: 172 FNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEG 231

Query: 187 HAAGH-HHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGA 245
           +     +H+P    PGA G      GG GG GGGG    GGGGG G GG G GA  A  A
Sbjct: 232 YPNSQCNHYPGYSRPGAGGG-----GGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAA 286

Query: 246 LHPHHAAGG 254
                A GG
Sbjct: 287 AAAAAAGGG 295



 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 42/131 (32%), Positives = 49/131 (37%), Gaps = 17/131 (12%)

Query: 126 GGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHH 185
           GG  G   G    +   G G GA  GG+G     A AV +A  AAAAA  G G       
Sbjct: 249 GGGGGGGGGGGGGSGGGGGGGGAGAGGAG-----AGAVAAAAAAAAAAAGGGG------- 296

Query: 186 HHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGA 245
               G +   +AG    +       G   G GGGG AS      G   GG    AG    
Sbjct: 297 ---GGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQN-- 351

Query: 246 LHPHHAAGGLH 256
            HP  A   L+
Sbjct: 352 QHPSGATPTLN 362



 Score = 40.0 bits (92), Expect = 0.003
 Identities = 42/158 (26%), Positives = 56/158 (35%), Gaps = 36/158 (22%)

Query: 118 ISNSHQLQGGFDGYARGAQQLAAAAGAGA-GASLGGSGEEMGPAAAVVSAVIAAAAAQSG 176
           ISN++ L G   G  +    +      GA  ++ GG  +  GP       +++    +  
Sbjct: 76  ISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP------LLSKPGDEDD 129

Query: 177 AGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGA----------GGGGPASAGG 226
           A P        A G + HP  GA G      A  GG GG           G   PAS G 
Sbjct: 130 APPKMGEP---AGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGP 186

Query: 227 GGGGG------GG----------GGGGGAAGAGGALHP 248
           GG  G      GG               AAGA G++ P
Sbjct: 187 GGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDP 224



 Score = 38.5 bits (88), Expect = 0.010
 Identities = 13/18 (72%), Positives = 13/18 (72%)

Query: 177 AGPHYHHHHHHAAGHHHH 194
           A PH  HHHHH A HHHH
Sbjct: 20  APPHQQHHHHHHAHHHHH 37



 Score = 38.1 bits (87), Expect = 0.013
 Identities = 40/157 (25%), Positives = 51/157 (32%), Gaps = 38/157 (24%)

Query: 127 GFDGYARGAQQLAAAAGAGAGASLGGS---------------GEEMGPAAAVVSAVIAAA 171
           G    A  A   AAAAG G G   GGS               G  MGP     +++  AA
Sbjct: 277 GAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAA 336

Query: 172 AAQSGAG-PHYHHHHHHAAG----------------------HHHHPTAGAPGAAGSAAA 208
           A  +  G   +   + H +G                      +  + +  AP    S   
Sbjct: 337 AGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQ 396

Query: 209 SAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGA 245
           S   A GA  GG  +A G G G   G    AA    A
Sbjct: 397 SQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWA 433



 Score = 33.5 bits (75), Expect = 0.32
 Identities = 11/15 (73%), Positives = 11/15 (73%)

Query: 180 HYHHHHHHAAGHHHH 194
           H HHHHHHA   HHH
Sbjct: 31  HAHHHHHHAHHLHHH 45



 Score = 32.3 bits (72), Expect = 0.71
 Identities = 26/92 (28%), Positives = 29/92 (31%), Gaps = 19/92 (20%)

Query: 169 AAAAAQSGAGPHYHHHHHHAAGHHHHPTA-------------------GAPGAAGSAAAS 209
           AA   Q     H+ HHHHH A H HH  A                             ++
Sbjct: 19  AAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISN 78

Query: 210 AGGAGGAGGGGPASAGGGGGGGGGGGGGGAAG 241
               GGAGGG P           GG    AAG
Sbjct: 79  NNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAG 110



 Score = 29.3 bits (64), Expect = 6.0
 Identities = 36/165 (21%), Positives = 57/165 (34%), Gaps = 25/165 (15%)

Query: 63  PCSSVPPSPSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEALGFSPEDAVEALISNSH 122
           P  S  PS S+S P PG G      +       G  Q      LG  P   ++     + 
Sbjct: 799 PAYSGVPSASYSGPGPGMGISANNQMHG----QGPSQPCGAVPLGRMPSAGMQ-----NR 849

Query: 123 QLQGGFDGYARGAQQLAAAAGAGAGASLGG-SGEEMGPAAAVVSAVIAAAAAQSGAGPHY 181
              G        +  ++   G G G  +   + +    AAAV+ A   +A ++ G+ P  
Sbjct: 850 PFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGM 909

Query: 182 HHHHHHAAGHHHH---------------PTAGAPGAAGSAAASAG 211
           +     A+   +                P + AP    S+AAS G
Sbjct: 910 NQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVG 954


>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
           [Homo sapiens]
          Length = 2231

 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 45/129 (34%), Positives = 56/129 (43%), Gaps = 7/129 (5%)

Query: 128 FDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGA-GPHYHHHHH 186
           F+ Y   A   +   G  AG      G +  P   ++ +  AAAA   G+  P  + H  
Sbjct: 172 FNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEG 231

Query: 187 HAAGH-HHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGA 245
           +     +H+P    PGA G      GG GG GGGG    GGGGG G GG G GA  A  A
Sbjct: 232 YPNSQCNHYPGYSRPGAGGG-----GGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAA 286

Query: 246 LHPHHAAGG 254
                A GG
Sbjct: 287 AAAAAAGGG 295



 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 42/131 (32%), Positives = 49/131 (37%), Gaps = 17/131 (12%)

Query: 126 GGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHH 185
           GG  G   G    +   G G GA  GG+G     A AV +A  AAAAA  G G       
Sbjct: 249 GGGGGGGGGGGGGSGGGGGGGGAGAGGAG-----AGAVAAAAAAAAAAAGGGG------- 296

Query: 186 HHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGA 245
               G +   +AG    +       G   G GGGG AS      G   GG    AG    
Sbjct: 297 ---GGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQN-- 351

Query: 246 LHPHHAAGGLH 256
            HP  A   L+
Sbjct: 352 QHPSGATPTLN 362



 Score = 40.0 bits (92), Expect = 0.003
 Identities = 42/158 (26%), Positives = 56/158 (35%), Gaps = 36/158 (22%)

Query: 118 ISNSHQLQGGFDGYARGAQQLAAAAGAGA-GASLGGSGEEMGPAAAVVSAVIAAAAAQSG 176
           ISN++ L G   G  +    +      GA  ++ GG  +  GP       +++    +  
Sbjct: 76  ISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP------LLSKPGDEDD 129

Query: 177 AGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGA----------GGGGPASAGG 226
           A P        A G + HP  GA G      A  GG GG           G   PAS G 
Sbjct: 130 APPKMGEP---AGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGP 186

Query: 227 GGGGG------GG----------GGGGGAAGAGGALHP 248
           GG  G      GG               AAGA G++ P
Sbjct: 187 GGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDP 224



 Score = 38.5 bits (88), Expect = 0.010
 Identities = 13/18 (72%), Positives = 13/18 (72%)

Query: 177 AGPHYHHHHHHAAGHHHH 194
           A PH  HHHHH A HHHH
Sbjct: 20  APPHQQHHHHHHAHHHHH 37



 Score = 38.1 bits (87), Expect = 0.013
 Identities = 40/157 (25%), Positives = 51/157 (32%), Gaps = 38/157 (24%)

Query: 127 GFDGYARGAQQLAAAAGAGAGASLGGS---------------GEEMGPAAAVVSAVIAAA 171
           G    A  A   AAAAG G G   GGS               G  MGP     +++  AA
Sbjct: 277 GAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAA 336

Query: 172 AAQSGAG-PHYHHHHHHAAG----------------------HHHHPTAGAPGAAGSAAA 208
           A  +  G   +   + H +G                      +  + +  AP    S   
Sbjct: 337 AGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQ 396

Query: 209 SAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGA 245
           S   A GA  GG  +A G G G   G    AA    A
Sbjct: 397 SQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWA 433



 Score = 33.5 bits (75), Expect = 0.32
 Identities = 11/15 (73%), Positives = 11/15 (73%)

Query: 180 HYHHHHHHAAGHHHH 194
           H HHHHHHA   HHH
Sbjct: 31  HAHHHHHHAHHLHHH 45



 Score = 32.3 bits (72), Expect = 0.71
 Identities = 26/92 (28%), Positives = 29/92 (31%), Gaps = 19/92 (20%)

Query: 169 AAAAAQSGAGPHYHHHHHHAAGHHHHPTA-------------------GAPGAAGSAAAS 209
           AA   Q     H+ HHHHH A H HH  A                             ++
Sbjct: 19  AAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISN 78

Query: 210 AGGAGGAGGGGPASAGGGGGGGGGGGGGGAAG 241
               GGAGGG P           GG    AAG
Sbjct: 79  NNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAG 110



 Score = 29.3 bits (64), Expect = 6.0
 Identities = 36/165 (21%), Positives = 57/165 (34%), Gaps = 25/165 (15%)

Query: 63  PCSSVPPSPSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEALGFSPEDAVEALISNSH 122
           P  S  PS S+S P PG G      +       G  Q      LG  P   ++     + 
Sbjct: 786 PAYSGVPSASYSGPGPGMGISANNQMHG----QGPSQPCGAVPLGRMPSAGMQ-----NR 836

Query: 123 QLQGGFDGYARGAQQLAAAAGAGAGASLGG-SGEEMGPAAAVVSAVIAAAAAQSGAGPHY 181
              G        +  ++   G G G  +   + +    AAAV+ A   +A ++ G+ P  
Sbjct: 837 PFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGM 896

Query: 182 HHHHHHAAGHHHH---------------PTAGAPGAAGSAAASAG 211
           +     A+   +                P + AP    S+AAS G
Sbjct: 897 NQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVG 941


>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
           [Homo sapiens]
          Length = 2178

 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 45/129 (34%), Positives = 56/129 (43%), Gaps = 7/129 (5%)

Query: 128 FDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGA-GPHYHHHHH 186
           F+ Y   A   +   G  AG      G +  P   ++ +  AAAA   G+  P  + H  
Sbjct: 172 FNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEG 231

Query: 187 HAAGH-HHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGA 245
           +     +H+P    PGA G      GG GG GGGG    GGGGG G GG G GA  A  A
Sbjct: 232 YPNSQCNHYPGYSRPGAGGG-----GGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAA 286

Query: 246 LHPHHAAGG 254
                A GG
Sbjct: 287 AAAAAAGGG 295



 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 42/131 (32%), Positives = 49/131 (37%), Gaps = 17/131 (12%)

Query: 126 GGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHH 185
           GG  G   G    +   G G GA  GG+G     A AV +A  AAAAA  G G       
Sbjct: 249 GGGGGGGGGGGGGSGGGGGGGGAGAGGAG-----AGAVAAAAAAAAAAAGGGG------- 296

Query: 186 HHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGA 245
               G +   +AG    +       G   G GGGG AS      G   GG    AG    
Sbjct: 297 ---GGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQN-- 351

Query: 246 LHPHHAAGGLH 256
            HP  A   L+
Sbjct: 352 QHPSGATPTLN 362



 Score = 40.0 bits (92), Expect = 0.003
 Identities = 42/158 (26%), Positives = 56/158 (35%), Gaps = 36/158 (22%)

Query: 118 ISNSHQLQGGFDGYARGAQQLAAAAGAGA-GASLGGSGEEMGPAAAVVSAVIAAAAAQSG 176
           ISN++ L G   G  +    +      GA  ++ GG  +  GP       +++    +  
Sbjct: 76  ISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP------LLSKPGDEDD 129

Query: 177 AGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGA----------GGGGPASAGG 226
           A P        A G + HP  GA G      A  GG GG           G   PAS G 
Sbjct: 130 APPKMGEP---AGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGP 186

Query: 227 GGGGG------GG----------GGGGGAAGAGGALHP 248
           GG  G      GG               AAGA G++ P
Sbjct: 187 GGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDP 224



 Score = 38.5 bits (88), Expect = 0.010
 Identities = 13/18 (72%), Positives = 13/18 (72%)

Query: 177 AGPHYHHHHHHAAGHHHH 194
           A PH  HHHHH A HHHH
Sbjct: 20  APPHQQHHHHHHAHHHHH 37



 Score = 38.1 bits (87), Expect = 0.013
 Identities = 40/157 (25%), Positives = 51/157 (32%), Gaps = 38/157 (24%)

Query: 127 GFDGYARGAQQLAAAAGAGAGASLGGS---------------GEEMGPAAAVVSAVIAAA 171
           G    A  A   AAAAG G G   GGS               G  MGP     +++  AA
Sbjct: 277 GAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAA 336

Query: 172 AAQSGAG-PHYHHHHHHAAG----------------------HHHHPTAGAPGAAGSAAA 208
           A  +  G   +   + H +G                      +  + +  AP    S   
Sbjct: 337 AGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQ 396

Query: 209 SAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGA 245
           S   A GA  GG  +A G G G   G    AA    A
Sbjct: 397 SQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWA 433



 Score = 33.5 bits (75), Expect = 0.32
 Identities = 11/15 (73%), Positives = 11/15 (73%)

Query: 180 HYHHHHHHAAGHHHH 194
           H HHHHHHA   HHH
Sbjct: 31  HAHHHHHHAHHLHHH 45



 Score = 32.3 bits (72), Expect = 0.71
 Identities = 26/92 (28%), Positives = 29/92 (31%), Gaps = 19/92 (20%)

Query: 169 AAAAAQSGAGPHYHHHHHHAAGHHHHPTA-------------------GAPGAAGSAAAS 209
           AA   Q     H+ HHHHH A H HH  A                             ++
Sbjct: 19  AAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISN 78

Query: 210 AGGAGGAGGGGPASAGGGGGGGGGGGGGGAAG 241
               GGAGGG P           GG    AAG
Sbjct: 79  NNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAG 110



 Score = 29.3 bits (64), Expect = 6.0
 Identities = 36/165 (21%), Positives = 57/165 (34%), Gaps = 25/165 (15%)

Query: 63  PCSSVPPSPSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEALGFSPEDAVEALISNSH 122
           P  S  PS S+S P PG G      +       G  Q      LG  P   ++     + 
Sbjct: 786 PAYSGVPSASYSGPGPGMGISANNQMHG----QGPSQPCGAVPLGRMPSAGMQ-----NR 836

Query: 123 QLQGGFDGYARGAQQLAAAAGAGAGASLGG-SGEEMGPAAAVVSAVIAAAAAQSGAGPHY 181
              G        +  ++   G G G  +   + +    AAAV+ A   +A ++ G+ P  
Sbjct: 837 PFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGM 896

Query: 182 HHHHHHAAGHHHH---------------PTAGAPGAAGSAAASAG 211
           +     A+   +                P + AP    S+AAS G
Sbjct: 897 NQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVG 941


>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
          Length = 476

 Score = 68.6 bits (166), Expect = 9e-12
 Identities = 49/122 (40%), Positives = 60/122 (49%), Gaps = 13/122 (10%)

Query: 136 QQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHP 195
           Q  AAAAG  + AS          AAA  +A  A++AA +GA P            H   
Sbjct: 345 QAPAAAAGLNSAASAA--------AAAAAAAAAASSAAAAGAPPSGGSAPCSCLSCHSSQ 396

Query: 196 TAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGGL 255
           +A A  AA +AAA+ G  GG GGGG    GGGGGGGG G GGG+     A  P   +G L
Sbjct: 397 SAAA--AAAAAAAALGSRGGGGGGG---GGGGGGGGGAGAGGGSDFGCSAAAPRSESGFL 451

Query: 256 HF 257
            +
Sbjct: 452 PY 453



 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 44/143 (30%), Positives = 55/143 (38%), Gaps = 41/143 (28%)

Query: 139 AAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHPTAG 198
           AAAA A +GA+   S      A ++       A +   + P       H  G +  P A 
Sbjct: 295 AAAAAAASGAAAAASSPF---ATSIRPLDTFRALSHPYSRPELLCSFRHP-GLYQAPAAA 350

Query: 199 APGAAGSAAASAGGAGGA-------------GGGGPAS---------------------- 223
           A   + ++AA+A  A  A             GG  P S                      
Sbjct: 351 AGLNSAASAAAAAAAAAAAASSAAAAGAPPSGGSAPCSCLSCHSSQSAAAAAAAAAAALG 410

Query: 224 --AGGGGGGGGGGGGGGAAGAGG 244
              GGGGGGGGGGGGGG AGAGG
Sbjct: 411 SRGGGGGGGGGGGGGGGGAGAGG 433



 Score = 34.7 bits (78), Expect = 0.14
 Identities = 31/99 (31%), Positives = 39/99 (39%), Gaps = 17/99 (17%)

Query: 162 AVVSAVIAAAAAQSGAGPHYHHHHHHA-------AGHHHHPTAGAPGAA------GSAAA 208
           + VS+ I++AA       HY      A        G     + G  GAA      G   A
Sbjct: 86  STVSSEISSAAESRKKPGHYSEAAAEADMSSDVEVGCSALRSPGGLGAAQLKENNGKGYA 145

Query: 209 SAGGAGG----AGGGGPASAGGGGGGGGGGGGGGAAGAG 243
            +G A G    A G G  S  GG GG GG    G +G+G
Sbjct: 146 ESGSAAGTTTSASGSGLGSLHGGSGGSGGSAALGGSGSG 184



 Score = 32.3 bits (72), Expect = 0.71
 Identities = 31/111 (27%), Positives = 41/111 (36%), Gaps = 27/111 (24%)

Query: 155 EEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAG 214
           +  G  + V S + +AA ++   G     H+  AA      +    G   SA  S GG G
Sbjct: 80  QHTGSESTVSSEISSAAESRKKPG-----HYSEAAAEADMSSDVEVGC--SALRSPGGLG 132

Query: 215 ---------------GAGGGGPASAGGGG-----GGGGGGGGGGAAGAGGA 245
                          G+  G   SA G G     GG GG GG  A G  G+
Sbjct: 133 AAQLKENNGKGYAESGSAAGTTTSASGSGLGSLHGGSGGSGGSAALGGSGS 183



 Score = 32.3 bits (72), Expect = 0.71
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 203 AGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGA 242
           +GSAA +   A G+G G     G GG GG    GG  +GA
Sbjct: 147 SGSAAGTTTSASGSGLGS-LHGGSGGSGGSAALGGSGSGA 185



 Score = 29.3 bits (64), Expect = 6.0
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)

Query: 172 AAQSGAGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGA 216
           AA +G+ P+  H H      H++P  G   AA +AAAS   A  +
Sbjct: 268 AAATGSLPYPFHSH---VPLHYYPHVGVTAAAAAAAASGAAAAAS 309


>gi|21322252 androgen receptor isoform 1 [Homo sapiens]
          Length = 920

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 78/250 (31%), Positives = 93/250 (37%), Gaps = 50/250 (20%)

Query: 49  LIAGGSLSSTPMSTPCSSVPPS--PSFSAP-----------SPGSGSEQKAHLEDYYWMT 95
           L  G  L    M  P   VPP+  P+  AP           S G  +E  A    +    
Sbjct: 257 LSPGEQLRGDCMYAPLLGVPPAVRPTPCAPLAECKGSLLDDSAGKSTEDTAEYSPF--KG 314

Query: 96  GYPQQLNPEALGFSPEDAVEALISNSHQLQGGFDGYARGAQQLAAAAGAGA--GASLGGS 153
           GY + L  E+LG S   A  +  S + +L      Y  GA   AAA  +       L  +
Sbjct: 315 GYTKGLEGESLGCSGSAAAGS--SGTLELPSTLSLYKSGALDEAAAYQSRDYYNFPLALA 372

Query: 154 GEEMGPAAAVVSAVI------------AAAAAQSGAGPHYHHHHHHAAGHHHHPTAGAPG 201
           G    P      A I            AAAAAQ   G     H   AAG    P +G+P 
Sbjct: 373 GPPPPPPPPHPHARIKLENPLDYGSAWAAAAAQCRYGDLASLHGAGAAG----PGSGSPS 428

Query: 202 AAGSAA-------------ASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHP 248
           AA S++                GG GG GGGG    GGGGGGGGGGG  GA    G   P
Sbjct: 429 AAASSSWHTLFTAEEGQLYGPCGGGGGGGGGG--GGGGGGGGGGGGGEAGAVAPYGYTRP 486

Query: 249 HHAAGGLHFD 258
                G   D
Sbjct: 487 PQGLAGQESD 496


>gi|109148552 keratin 3 [Homo sapiens]
          Length = 628

 Score = 63.5 bits (153), Expect = 3e-10
 Identities = 71/237 (29%), Positives = 99/237 (41%), Gaps = 32/237 (13%)

Query: 107 GFSPEDAVEALISNSHQLQ-----GGFDGYARGAQQLAAAAGAGAGASLGGS-------- 153
           GFS   AV   +S S ++      GG  G A G +  A   G+ +  +LGG+        
Sbjct: 15  GFSGRSAV---VSGSSRMSCVAHSGGAGGGAYGFRSGAGGFGSRSLYNLGGNKSISISVA 71

Query: 154 --GEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAG 211
             G   G      S+   A     G G  Y        G       G  GA G      G
Sbjct: 72  AGGSRAGGFGGGRSSCAFAGGYGGGFGSGYGGGFGGGFGGGRGMGGGFGGAGGF-----G 126

Query: 212 GAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGGLHFDDRFSDEQLVTMSV 271
           GAGG GG G     GG GG GG GG G+ G+ G   P    GG+  +   +   L  ++V
Sbjct: 127 GAGGFGGAGGFGGPGGFGGSGGFGGPGSLGSPGGFGPGGFPGGIQ-EVTINQSLLQPLNV 185

Query: 272 RELNRQLRGVSKEEVIRLKQKRRTLKNR--GYAQSCRFKRVQQRHVLESEKNQLLQQ 326
            E++ Q+  V  +E    +++ +TL N+   +    RF   QQ  VLE++ N L QQ
Sbjct: 186 -EIDPQIGQVKAQE----REQIKTLNNKFASFIDKVRFLE-QQNKVLETKWNLLQQQ 236



 Score = 45.8 bits (107), Expect = 6e-05
 Identities = 24/49 (48%), Positives = 28/49 (57%), Gaps = 7/49 (14%)

Query: 202 AAGSAAASAGGAGGAGGGGPA-------SAGGGGGGGGGGGGGGAAGAG 243
           ++ + +ASAGG GG  GGG         SAGGG G G G GGGG  G G
Sbjct: 527 SSSTTSASAGGYGGGYGGGMGGGLGGGFSAGGGSGSGFGRGGGGGIGGG 575



 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 21/43 (48%), Positives = 23/43 (53%)

Query: 202 AAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGG 244
           A G      GG GG  GGG ++ GG G G G GGGGG  G  G
Sbjct: 535 AGGYGGGYGGGMGGGLGGGFSAGGGSGSGFGRGGGGGIGGGFG 577



 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 22/45 (48%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 201 GAAGSAAASAGGAGGAGGGGPASAGGGGGGG-GGGGGGGAAGAGG 244
           G  G      GG   AGGG  +  G GGGGG GGG GGG++G  G
Sbjct: 541 GYGGGMGGGLGGGFSAGGGSGSGFGRGGGGGIGGGFGGGSSGFSG 585



 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 27/87 (31%), Positives = 34/87 (39%), Gaps = 9/87 (10%)

Query: 159 PAAAVVSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGG 218
           P+A  +S V ++  + S  G           G +     G  G   SA   +G   G GG
Sbjct: 518 PSAVSISVVSSSTTSASAGG---------YGGGYGGGMGGGLGGGFSAGGGSGSGFGRGG 568

Query: 219 GGPASAGGGGGGGGGGGGGGAAGAGGA 245
           GG    G GGG  G  GG G     GA
Sbjct: 569 GGGIGGGFGGGSSGFSGGSGFGSISGA 595



 Score = 38.5 bits (88), Expect = 0.010
 Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 9/70 (12%)

Query: 190 GHHHHPTAGAPGAAG----SAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGA 245
           G  +  +   P A      S++ ++  AGG GGG      GGG GGG GGG  A G  G+
Sbjct: 508 GEEYRMSGECPSAVSISVVSSSTTSASAGGYGGGY-----GGGMGGGLGGGFSAGGGSGS 562

Query: 246 LHPHHAAGGL 255
                  GG+
Sbjct: 563 GFGRGGGGGI 572



 Score = 35.8 bits (81), Expect = 0.064
 Identities = 28/100 (28%), Positives = 37/100 (37%), Gaps = 2/100 (2%)

Query: 146 AGASLGGSGEEMGPAAAVVSAV--IAAAAAQSGAGPHYHHHHHHAAGHHHHPTAGAPGAA 203
           A  + GG  +     +AVVS    ++  A   GAG   +     A G          G  
Sbjct: 5   ASKTSGGGSQGFSGRSAVVSGSSRMSCVAHSGGAGGGAYGFRSGAGGFGSRSLYNLGGNK 64

Query: 204 GSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAG 243
             + + A G   AGG G   +     GG GGG G   G G
Sbjct: 65  SISISVAAGGSRAGGFGGGRSSCAFAGGYGGGFGSGYGGG 104


>gi|238859557 regulatory factor X1 [Homo sapiens]
          Length = 979

 Score = 63.2 bits (152), Expect = 4e-10
 Identities = 35/100 (35%), Positives = 44/100 (44%), Gaps = 14/100 (14%)

Query: 155 EEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAG 214
           E  G A  V +   + A A SG+ P Y               +G+   A S +  AG + 
Sbjct: 333 EAAGTATQVSTPATSQAVASSGSMPMY--------------VSGSQVVASSTSTGAGASN 378

Query: 215 GAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGG 254
            +GGGG    GGGGGGGGGGG G   G G     +   GG
Sbjct: 379 SSGGGGSGGGGGGGGGGGGGGSGSTGGGGSGAGTYVIQGG 418



 Score = 30.0 bits (66), Expect = 3.5
 Identities = 37/180 (20%), Positives = 59/180 (32%), Gaps = 19/180 (10%)

Query: 13  PTSPLAMEYVNDFDLMKFEVKKEPVETDRIISQCGRLIAGGSLSSTPMSTPCS--SVPPS 70
           P  PL ++ +    + +   + + V    + S   + + GG  S T  +   S  S P +
Sbjct: 261 PVQPLTVQGLQPVHVAQEVQQLQQVPVPHVYSSQVQYVEGGDASYTASAIRSSTYSYPET 320

Query: 71  PSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEAL-------GFSPEDAVEALISNSHQ 123
           P ++  +  S          YY   G   Q++  A        G  P     + +  S  
Sbjct: 321 PLYTQTASTS----------YYEAAGTATQVSTPATSQAVASSGSMPMYVSGSQVVASST 370

Query: 124 LQGGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHH 183
             G     + G        G G G   GGSG   G  +   + VI        A   Y H
Sbjct: 371 STGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTGGGGSGAGTYVIQGGYMLGSASQSYSH 430


>gi|55956899 keratin 9 [Homo sapiens]
          Length = 623

 Score = 62.0 bits (149), Expect = 8e-10
 Identities = 41/131 (31%), Positives = 55/131 (41%), Gaps = 4/131 (3%)

Query: 126 GGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHH 185
           G +   +RG    +   G   G   GGSG   G   +      +   +  G G      H
Sbjct: 483 GSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGH 542

Query: 186 HHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGG--GGGGGGGGGAAGAG 243
              +G  H  + G+ G  G  + S GG+GG  GGG  S GG GG  GGG G GG + G+ 
Sbjct: 543 SGGSGGGH--SGGSGGNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSY 600

Query: 244 GALHPHHAAGG 254
           G       +GG
Sbjct: 601 GGGEEASGSGG 611



 Score = 60.1 bits (144), Expect = 3e-09
 Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 1/80 (1%)

Query: 174 QSGAGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGG 233
           + G+G  Y       +G  +    G+ G  G  + S GG+GG+ GGG  S GG GGG GG
Sbjct: 478 RGGSGGSYGRGSRGGSGGSYGG-GGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGG 536

Query: 234 GGGGGAAGAGGALHPHHAAG 253
           G GGG +G  G  H   + G
Sbjct: 537 GSGGGHSGGSGGGHSGGSGG 556



 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 43/142 (30%), Positives = 54/142 (38%), Gaps = 43/142 (30%)

Query: 125 QGGFDG-YARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHH 183
           +GG  G Y RG++        G+G S GG G   G            + ++ G+G  Y  
Sbjct: 478 RGGSGGSYGRGSR-------GGSGGSYGGGGSGGGYGGG--------SGSRGGSGGSYG- 521

Query: 184 HHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGG---------GGGGGG 234
                            G +GS   S GG GG  GGG +   GGG         GGG G 
Sbjct: 522 -----------------GGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGS 564

Query: 235 GGGGAAGAGGALHPHHAAGGLH 256
           GGG   G GG       +GG H
Sbjct: 565 GGGSGGGYGGGSGSRGGSGGSH 586



 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 36/119 (30%), Positives = 50/119 (42%), Gaps = 12/119 (10%)

Query: 127 GFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHH 186
           G  G  R +    +++G G G     S    G  ++ V         + G G   + +  
Sbjct: 23  GSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRV-------CGRGGGGSFGYSYGG 75

Query: 187 HAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGA 245
            + G     + G     GS      G GGA GGG +S+GG GGG GGG GGG  G  G+
Sbjct: 76  GSGGGFSASSLGGGFGGGSR-----GFGGASGGGYSSSGGFGGGFGGGSGGGFGGGYGS 129



 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 44/165 (26%), Positives = 61/165 (36%), Gaps = 12/165 (7%)

Query: 126 GGFDGYARGAQ------QLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQS-GAG 178
           GG  G   G        + +++ G G G     S    G ++ V       +   S G G
Sbjct: 17  GGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGGG 76

Query: 179 PHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGG-----GGGGG 233
                      G     + G  GA+G   +S+GG GG  GGG     GGG     GG GG
Sbjct: 77  SGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFGGFGG 136

Query: 234 GGGGGAAGAGGALHPHHAAGGLHFDDRFSDEQLVTMSVRELNRQL 278
            GGG   G GG L  +  +     + R +       ++ E N  L
Sbjct: 137 FGGGAGGGDGGILTANEKSTMQELNSRLASYLDKVQALEEANNDL 181



 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 10/127 (7%)

Query: 126 GGFDGYARGAQQLAAAAGA--GAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHH 183
           G   GY  G+     + G+  G   S GGSG   G  +    +  +      G+G +Y  
Sbjct: 501 GSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGG 560

Query: 184 HHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGG---GGGGGGGAA 240
                 G     + G  G    +   +GG+ G G G    +GG  GGG    G GGG   
Sbjct: 561 GSGSGGG-----SGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGG 615

Query: 241 GAGGALH 247
           G+G + H
Sbjct: 616 GSGKSSH 622



 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 3/75 (4%)

Query: 183 HHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAG--GGGPASAGGGGGGGG-GGGGGGA 239
           +H+    G     ++GA          +GG+ G G  GG   S GGGG GGG GGG G  
Sbjct: 454 YHNLLEGGQEDFESSGAGKIGLGGRGGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSR 513

Query: 240 AGAGGALHPHHAAGG 254
            G+GG+      +GG
Sbjct: 514 GGSGGSYGGGSGSGG 528



 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 2/58 (3%)

Query: 198 GAPGAAGS-AAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGG 254
           G  G+ GS    S GG+GG+ GGG  S GG GGG G  GG G +  GG+     + GG
Sbjct: 477 GRGGSGGSYGRGSRGGSGGSYGGG-GSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGG 533



 Score = 37.4 bits (85), Expect = 0.022
 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 15/62 (24%)

Query: 208 ASAGGAGGAGGGGP--------ASAGGGGGGGG-------GGGGGGAAGAGGALHPHHAA 252
           +  GG GG G GG         +S+GGGGGGG        GGG     G GG     ++ 
Sbjct: 14  SGGGGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSY 73

Query: 253 GG 254
           GG
Sbjct: 74  GG 75



 Score = 29.6 bits (65), Expect = 4.6
 Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 12/44 (27%)

Query: 223 SAGGGGGGGGGGGGG------------GAAGAGGALHPHHAAGG 254
           S  GGGGGGG G GG            G  G GG        GG
Sbjct: 12  SRSGGGGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGG 55


>gi|154355000 KH-type splicing regulatory protein [Homo sapiens]
          Length = 711

 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 34/73 (46%), Positives = 36/73 (49%), Gaps = 3/73 (4%)

Query: 194 HPTAGAPGAAGSAAASAGGAGGAGGG---GPASAGGGGGGGGGGGGGGAAGAGGALHPHH 250
           + T G P      A   GGAGGAGGG   GP  AG  GGGG GGGG G   AGG   P  
Sbjct: 4   YSTGGPPPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPG 63

Query: 251 AAGGLHFDDRFSD 263
             G     D F+D
Sbjct: 64  GGGPGIRKDAFAD 76



 Score = 38.9 bits (89), Expect = 0.008
 Identities = 20/46 (43%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 188 AAGHHHHPTAGAPGAA--GSAAASAGGAGGAGGGGPASAGGGGGGG 231
           A G    P  G PGA   G      GG GG   GGP+   GGGG G
Sbjct: 23  AGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPGGGGPG 68


>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
          Length = 532

 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 32/63 (50%), Positives = 35/63 (55%), Gaps = 12/63 (19%)

Query: 195 PTAGAPGAAGSAAASA------------GGAGGAGGGGPASAGGGGGGGGGGGGGGAAGA 242
           P A A  AA +AAA+A            GGAGG  GGG  S GGGGG GGGGGG    G+
Sbjct: 455 PAAAAAAAAAAAAAAAVSAVHRGGGSGSGGAGGGSGGGSGSGGGGGGAGGGGGGSSGGGS 514

Query: 243 GGA 245
           G A
Sbjct: 515 GTA 517



 Score = 58.5 bits (140), Expect = 9e-09
 Identities = 37/89 (41%), Positives = 43/89 (48%), Gaps = 15/89 (16%)

Query: 153 SGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGG 212
           S   + PAAA  +A  AAAAA   A        H   G     + GA G +G  + S GG
Sbjct: 449 SSSNLSPAAAAAAAAAAAAAAAVSAV-------HRGGGSG---SGGAGGGSGGGSGSGGG 498

Query: 213 AGGAGGGGPASAGGGGGGGGGGGGGGAAG 241
            GGAGGGG     GG  GGG G  GG +G
Sbjct: 499 GGGAGGGG-----GGSSGGGSGTAGGHSG 522



 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 35/105 (33%), Positives = 39/105 (37%), Gaps = 39/105 (37%)

Query: 132 ARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHHHAAGH 191
           A  A   AAAA A   A   G G                    SG+G             
Sbjct: 457 AAAAAAAAAAAAAAVSAVHRGGG--------------------SGSG------------- 483

Query: 192 HHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGG 236
                 GA G +G  + S GG GGAGGGG  S+GGG G  GG  G
Sbjct: 484 ------GAGGGSGGGSGSGGGGGGAGGGGGGSSGGGSGTAGGHSG 522



 Score = 41.6 bits (96), Expect = 0.001
 Identities = 55/193 (28%), Positives = 72/193 (37%), Gaps = 24/193 (12%)

Query: 127 GFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHH 186
           G   +AR     AAAA A A         E+  AAA  +  + +AAA  GA       H 
Sbjct: 13  GVGSFARHHHHSAAAAAAAAAEM---QDRELSLAAAQ-NGFVDSAAAHMGAFKLNPGAHE 68

Query: 187 HAAGHHHHPTAGAPGAAGSAAASAGGAGGAG---------GGGPASAG----------GG 227
            + G     T+  PGA   +AA+A  A   G          G P ++           G 
Sbjct: 69  LSPGQSSAFTSQGPGAYPGSAAAAAAAAALGPHAAHVGSYSGPPFNSTRDFLFRSRGFGD 128

Query: 228 GGGGGGGGGGGAAGAGGALHPHHAAGGLHFDDRFSDEQLVTMSVRELNRQLR-GVSKEEV 286
              GGG  G    GAGG  H H  A G        ++     S   LN Q+R G+  E  
Sbjct: 129 SAPGGGQHGLFGPGAGGLHHAHSDAQGHLLFPGLPEQHGPHGSQNVLNGQMRLGLPGEVF 188

Query: 287 IRLKQKRRTLKNR 299
            R +Q R+    R
Sbjct: 189 GRSEQYRQVASPR 201



 Score = 41.6 bits (96), Expect = 0.001
 Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 4/47 (8%)

Query: 199 APGAAGSAAASAGGAGGAGGGGPASAGGGGGGGG-GGGGGGAAGAGG 244
           +P AA +AAA+A  A           GGG G GG GGG GG +G+GG
Sbjct: 454 SPAAAAAAAAAAAAAAAVSA---VHRGGGSGSGGAGGGSGGGSGSGG 497



 Score = 36.2 bits (82), Expect = 0.049
 Identities = 34/134 (25%), Positives = 49/134 (36%), Gaps = 22/134 (16%)

Query: 66  SVPPSPSFSAPSPGSGSEQKAH--LEDYYWMTGYPQQLNPEALGFSPEDAVEALISNSHQ 123
           S P         PG+G    AH   + +    G P+Q  P           + +++   +
Sbjct: 129 SAPGGGQHGLFGPGAGGLHHAHSDAQGHLLFPGLPEQHGPHGS--------QNVLNGQMR 180

Query: 124 LQGGFDGYARGAQQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHH 183
           L    + + R  Q    A+      S      + GP    +   +AAAAA         H
Sbjct: 181 LGLPGEVFGRSEQYRQVASPRTDPYSAAQLHNQYGPMNMNMGMNMAAAAA---------H 231

Query: 184 HHHHAAGHHHHPTA 197
           HHHH   HHHHP A
Sbjct: 232 HHHH---HHHHPGA 242



 Score = 33.5 bits (75), Expect = 0.32
 Identities = 16/51 (31%), Positives = 23/51 (45%)

Query: 195 PTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGA 245
           P+A    ++  + A+A  A  A     A +    GGG G GG G    GG+
Sbjct: 443 PSAEPQSSSNLSPAAAAAAAAAAAAAAAVSAVHRGGGSGSGGAGGGSGGGS 493



 Score = 33.5 bits (75), Expect = 0.32
 Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 205 SAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGG 254
           S AA+A  A  A      SA   GGG G GG G   G+GG        GG
Sbjct: 454 SPAAAAAAAAAAAAAAAVSAVHRGGGSGSGGAG--GGSGGGSGSGGGGGG 501



 Score = 30.8 bits (68), Expect = 2.1
 Identities = 17/60 (28%), Positives = 25/60 (41%)

Query: 195 PTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGG 254
           P   +P A   ++++   A  A     A+A         GGG G+ GAGG       +GG
Sbjct: 438 PGLVSPSAEPQSSSNLSPAAAAAAAAAAAAAAAVSAVHRGGGSGSGGAGGGSGGGSGSGG 497



 Score = 30.4 bits (67), Expect = 2.7
 Identities = 31/110 (28%), Positives = 38/110 (34%), Gaps = 24/110 (21%)

Query: 177 AGPHYHHHHHHAAGHHHHPTAGAPGAAGS---------AAASAGGAGGAG---------- 217
           AGP +      +   HHH +A A  AA +         AAA  G    A           
Sbjct: 5   AGPQFPAIGVGSFARHHHHSAAAAAAAAAEMQDRELSLAAAQNGFVDSAAAHMGAFKLNP 64

Query: 218 -----GGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGGLHFDDRFS 262
                  G +SA    G G   G   AA A  AL PH A  G +    F+
Sbjct: 65  GAHELSPGQSSAFTSQGPGAYPGSAAAAAAAAALGPHAAHVGSYSGPPFN 114


>gi|5902724 neuro-oncological ventral antigen 2 [Homo sapiens]
          Length = 492

 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 72/247 (29%), Positives = 104/247 (42%), Gaps = 43/247 (17%)

Query: 35  EPVETDRIISQCGRL----IAGGSLSSTPMSTPCSS---VPPSPSFSAPSPGSGSEQKAH 87
           + V+ D   S C  +    +AG   +S P  +P +S   V P+ + ++ +  SG    A 
Sbjct: 198 QKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASGLLGPAG 257

Query: 88  LEDYYWMTGYPQQLNPEALGFSPEDAVEALISNSHQLQGGFDGYARGAQQLAAAAGAGAG 147
           L     +  +P  L      FS  D +    + +     G++  + G    +AAA     
Sbjct: 258 LAG---VGAFPAALP----AFSGTDLLAISTALNTLASYGYNTNSLGLGLNSAAASGVLA 310

Query: 148 ASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHPTAGAPGAAGSAA 207
           A   G+     PAAA  + ++A+ A ++GAGP         AG    P    PGA GS A
Sbjct: 311 AVAAGAN----PAAAAAANLLASYAGEAGAGP---------AGGAAPPPPPPPGALGSFA 357

Query: 208 ASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGGLHFDDRFSDEQLV 267
            +A   G  G G      GGG GGGGG    AA A G      AAGG       + E+L 
Sbjct: 358 LAAAANGYLGAGA-----GGGAGGGGGPLVAAAAAAG------AAGGF-----LTAEKLA 401

Query: 268 TMSVREL 274
             S +EL
Sbjct: 402 AESAKEL 408


>gi|89145413 short stature homeobox 2 isoform a [Homo sapiens]
          Length = 331

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 8/101 (7%)

Query: 197 AGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHA--AGG 254
           AG    +  A  +AGG GG GGGG    GGGGGGGG GGGG   GAGG   P      G 
Sbjct: 46  AGRDDRSSPAVRAAGGGGGGGGGG----GGGGGGGGVGGGGAGGGAGGGRSPVRELDMGA 101

Query: 255 LHFDDRFSDEQLVTMS--VRELNRQLRGVSKEEVIRLKQKR 293
                     +L  +S  +++     +G+  E   ++KQ+R
Sbjct: 102 AERSREPGSPRLTEVSPELKDRKEDAKGMEDEGQTKIKQRR 142



 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 45/130 (34%), Positives = 61/130 (46%), Gaps = 18/130 (13%)

Query: 203 AGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGGLHFDDRFS 262
           AG    S+     AGGGG     GGGGGGGGGGGGG  G GGA      AGG     R  
Sbjct: 46  AGRDDRSSPAVRAAGGGG-----GGGGGGGGGGGGGGVGGGGA---GGGAGGGRSPVREL 97

Query: 263 DEQLVTMSVRELNRQLRGVSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHVLESEKNQ 322
           D      S    + +L  VS E   R K+  + +++ G        +++QR    S  N 
Sbjct: 98  DMGAAERSREPGSPRLTEVSPELKDR-KEDAKGMEDEGQT------KIKQR---RSRTNF 147

Query: 323 LLQQVDHLKQ 332
            L+Q++ L++
Sbjct: 148 TLEQLNELER 157



 Score = 29.3 bits (64), Expect = 6.0
 Identities = 14/33 (42%), Positives = 14/33 (42%)

Query: 188 AAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGG 220
           AAG       G  G  G      GGAGG  GGG
Sbjct: 58  AAGGGGGGGGGGGGGGGGGGVGGGGAGGGAGGG 90


>gi|119395750 keratin 1 [Homo sapiens]
          Length = 644

 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 63/239 (26%), Positives = 90/239 (37%), Gaps = 35/239 (14%)

Query: 140 AAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHPTAGA 199
           +  G G  +S GG G   G      S  +                    +G       G 
Sbjct: 39  SGGGGGRFSSCGGGGGSFGAGGGFGSRSLVNLGGSKSISISVARGGGRGSGFGGGYGGGG 98

Query: 200 PGAAGSAAAS--AGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGGLHF 257
            G  G        GG GG G GG  S GGG GGGG GGGG   G G    P    GG+  
Sbjct: 99  FGGGGFGGGGFGGGGIGGGGFGGFGSGGGGFGGGGFGGGGYGGGYGPVCPP----GGIQ- 153

Query: 258 DDRFSDEQLVTMSVRELNRQLRGVSKEEVIRLK----------QKRRTLKNRGYAQSCRF 307
           +   +   L  ++V E++ +++ V   E  ++K           K R L+ +      ++
Sbjct: 154 EVTINQSLLQPLNV-EIDPEIQKVKSREREQIKSLNNQFASFIDKVRFLEQQNQVLQTKW 212

Query: 308 KRVQQ----------RHVLESEKNQLLQQVDHLKQEISRLVRER-------DAYKEKYE 349
           + +QQ              ES  N L ++VD LK + SRL  E        + Y+ KYE
Sbjct: 213 ELLQQVDTSTRTHNLEPYFESFINNLRRRVDQLKSDQSRLDSELKNMQDMVEDYRNKYE 271



 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 40/143 (27%), Positives = 56/143 (39%), Gaps = 23/143 (16%)

Query: 118 ISNSHQLQGGFDGYARGAQQLAAAAGA-GAGASLGGSGEEMGPAAAVVSAVIAAAAAQSG 176
           IS      GG  GY  G     +  G+ G+G   GG     G   +   +   +  +  G
Sbjct: 512 ISGGGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGSYGSGGG 571

Query: 177 AGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGG 236
            G H                    G+ GS ++S G  GG+GGGG  S+GG G GGG  GG
Sbjct: 572 GGGH--------------------GSYGSGSSSGGYRGGSGGGGGGSSGGRGSGGGSSGG 611

Query: 237 --GGAAGAGGALHPHHAAGGLHF 257
             GG   + G +     +  + F
Sbjct: 612 SIGGRGSSSGGVKSSGGSSSVKF 634



 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 26/67 (38%), Positives = 31/67 (46%), Gaps = 4/67 (5%)

Query: 194 HPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGG----GGGGGAAGAGGALHPH 249
           H T    G+ G      G  G + G G  S G GGGGGGG    G GG + G+GG  +  
Sbjct: 509 HTTISGGGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGSYGS 568

Query: 250 HAAGGLH 256
              GG H
Sbjct: 569 GGGGGGH 575



 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 5/65 (7%)

Query: 195 PTAGAPGAAGSAAASAGGAGGAGGGGPASAG-----GGGGGGGGGGGGGAAGAGGALHPH 249
           P      +      S GG+ G GGGG  S G     GGG  G GGGGGG  G+ G+    
Sbjct: 499 PNVSVSVSTSHTTISGGGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGGRGSYGSGGSS 558

Query: 250 HAAGG 254
           + +GG
Sbjct: 559 YGSGG 563



 Score = 37.4 bits (85), Expect = 0.022
 Identities = 18/46 (39%), Positives = 22/46 (47%)

Query: 199 APGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGG 244
           AP  + S + S     G G  G    G G GG   G GGG+ G+GG
Sbjct: 498 APNVSVSVSTSHTTISGGGSRGGGGGGYGSGGSSYGSGGGSYGSGG 543



 Score = 36.2 bits (82), Expect = 0.049
 Identities = 19/54 (35%), Positives = 26/54 (48%)

Query: 186 HHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGA 239
           + + G     +AG         +S+    G GGG  +S GGGGG  G GGG G+
Sbjct: 11  YRSGGGFSSGSAGIINYQRRTTSSSTRRSGGGGGRFSSCGGGGGSFGAGGGFGS 64



 Score = 29.3 bits (64), Expect = 6.0
 Identities = 14/47 (29%), Positives = 20/47 (42%)

Query: 196 TAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGA 242
           ++G+ G       +   +    GGG       GGGGG  G GG  G+
Sbjct: 18  SSGSAGIINYQRRTTSSSTRRSGGGGGRFSSCGGGGGSFGAGGGFGS 64


>gi|4885597 sine oculis homeobox homolog 3 [Homo sapiens]
          Length = 332

 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 26/51 (50%), Positives = 29/51 (56%)

Query: 189 AGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGA 239
           A  HH     A    G+ A   GGAGG  GGG  + GGG GG GGGGGGG+
Sbjct: 20  ADSHHRSILLASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGS 70



 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 25/37 (67%), Positives = 26/37 (70%)

Query: 208 ASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGG 244
           AS+GG  GAGGGG A  G GGG G GGGG G AG GG
Sbjct: 30  ASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGG 66



 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 6/56 (10%)

Query: 179 PHYHHHHHHA---AGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGG 231
           P++   HH +   A       AG  G AG  +    GAGG G GG   AGGGGGGG
Sbjct: 17  PNFADSHHRSILLASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGG---AGGGGGGG 69


>gi|4502565 calpain, small subunit 1 [Homo sapiens]
          Length = 268

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 26/47 (55%), Positives = 27/47 (57%)

Query: 198 GAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGG 244
           G  G  G      GG G   GG  + AGGGGGGGGGGGGGG  G GG
Sbjct: 10  GGGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGGGGG 56



 Score = 31.6 bits (70), Expect = 1.2
 Identities = 32/119 (26%), Positives = 44/119 (36%), Gaps = 16/119 (13%)

Query: 197 AGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGGLH 256
           +GA G  G      GG GG GGG             GG     + A    +P       H
Sbjct: 34  SGAGGGGGGGGGGGGGGGGGGGGTAMRI-------LGGVISAISEAAAQYNPEPPPPRTH 86

Query: 257 FDDRFSDEQLVTMSVRELNRQLRG----VSKEEVIRLKQKRRT----LKNRGYA-QSCR 306
           + +  ++E       R L  QL G    VS  E++ +  K  T    LK  G+   +CR
Sbjct: 87  YSNIEANESEEVRQFRRLFAQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCR 145


>gi|51599151 calpain, small subunit 1 [Homo sapiens]
          Length = 268

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 26/47 (55%), Positives = 27/47 (57%)

Query: 198 GAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGG 244
           G  G  G      GG G   GG  + AGGGGGGGGGGGGGG  G GG
Sbjct: 10  GGGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGGGGG 56



 Score = 31.6 bits (70), Expect = 1.2
 Identities = 32/119 (26%), Positives = 44/119 (36%), Gaps = 16/119 (13%)

Query: 197 AGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGGLH 256
           +GA G  G      GG GG GGG             GG     + A    +P       H
Sbjct: 34  SGAGGGGGGGGGGGGGGGGGGGGTAMRI-------LGGVISAISEAAAQYNPEPPPPRTH 86

Query: 257 FDDRFSDEQLVTMSVRELNRQLRG----VSKEEVIRLKQKRRT----LKNRGYA-QSCR 306
           + +  ++E       R L  QL G    VS  E++ +  K  T    LK  G+   +CR
Sbjct: 87  YSNIEANESEEVRQFRRLFAQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCR 145


>gi|40288197 GATA binding protein 6 [Homo sapiens]
          Length = 595

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 67/255 (26%), Positives = 91/255 (35%), Gaps = 46/255 (18%)

Query: 37  VETDRIISQCGRLIAGGSLSSTPMSTPCSSVPPSPSFSAPSPGSGS----------EQKA 86
           ++T+       R +   S +S P   P    P +P  + P     S          +Q A
Sbjct: 65  LDTEAAAGPPARSLLLSSYASHPFGAPHG--PSAPGVAGPGGNLSSWEDLLLFTDLDQAA 122

Query: 87  HLEDYYWMTGYPQQLNPEALGFSPEDAVEALISNSHQLQGGFDGYARGAQQLAAAAGAGA 146
                 W +    +L+P A    PE+  + L + S Q    +DG   G    AAAA A A
Sbjct: 123 TASKLLW-SSRGAKLSPFAPE-QPEEMYQTLAALSSQGPAAYDGAPGGFVHSAAAAAAAA 180

Query: 147 GASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHPTAGAP------ 200
            A+   S     P   V S +        G+G    +H   A  H   P A A       
Sbjct: 181 AAA---SSPVYVPTTRVGSMLPGLPYHLQGSGSGPANHAGGAGAHPGWPQASADSPPYGS 237

Query: 201 --GAAGSAAASAGGAGGAGGG---------------------GPASAGGGGGGGGGGGGG 237
             GAAG  AA  GGAG A                        G  +A G GG GG  GGG
Sbjct: 238 GGGAAGGGAAGPGGAGSAAAHVSARFPYSPSPPMANGAAREPGGYAAAGSGGAGGVSGGG 297

Query: 238 GAAGAGGALHPHHAA 252
            +  A G   P +++
Sbjct: 298 SSLAAMGGREPQYSS 312



 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 6/74 (8%)

Query: 140 AAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHPTAGA 199
           AAAG+G    + G G  +           + +AA+   G ++HHHHH    HHHHP+  +
Sbjct: 283 AAAGSGGAGGVSGGGSSLAAMGGREPQYSSLSAARPLNGTYHHHHHH----HHHHPSPYS 338

Query: 200 P--GAAGSAAASAG 211
           P  GA  + A  AG
Sbjct: 339 PYVGAPLTPAWPAG 352



 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 27/74 (36%), Positives = 33/74 (44%), Gaps = 4/74 (5%)

Query: 129 DGYARGAQQLAAAAGAGAGASLGGSGE--EMGPAAAVVSAVIAAAAAQSGAGPHYHHHHH 186
           +G AR     AAA   GAG   GG      MG      S++ AA         H+HHHHH
Sbjct: 273 NGAAREPGGYAAAGSGGAGGVSGGGSSLAAMGGREPQYSSLSAARPLNGTYHHHHHHHHH 332

Query: 187 HAAGHHHHPTAGAP 200
           H +   + P  GAP
Sbjct: 333 HPS--PYSPYVGAP 344



 Score = 40.0 bits (92), Expect = 0.003
 Identities = 43/129 (33%), Positives = 50/129 (38%), Gaps = 17/129 (13%)

Query: 136 QQLAAAAGAGAGASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHHHAA---GHH 192
           Q LAA +  G  A  G       P   V SA  AAAAA + + P Y       +   G  
Sbjct: 149 QTLAALSSQGPAAYDGA------PGGFVHSAAAAAAAAAAASSPVYVPTTRVGSMLPGLP 202

Query: 193 HHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAA 252
           +H      G+    A  AGGAG   G   ASA     G GGG    AAG G A      +
Sbjct: 203 YH----LQGSGSGPANHAGGAGAHPGWPQASADSPPYGSGGG----AAGGGAAGPGGAGS 254

Query: 253 GGLHFDDRF 261
              H   RF
Sbjct: 255 AAAHVSARF 263


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.311    0.130    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,091,458
Number of Sequences: 37866
Number of extensions: 1026839
Number of successful extensions: 50031
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 574
Number of HSP's that attempted gapping in prelim test: 13872
Number of HSP's gapped (non-prelim): 14110
length of query: 373
length of database: 18,247,518
effective HSP length: 104
effective length of query: 269
effective length of database: 14,309,454
effective search space: 3849243126
effective search space used: 3849243126
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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