Guide to the Human Genome
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Name: CD99L2 Sequence: fasta or formatted (262aa) NCBI GI: 71067336
Description:

CD99 antigen-like 2 isoform E3'-E4'-E3-E4

Referenced in:

Hematopoiesis and Erythrocytes

Other entries for this name:
alt prot [190aa] CD99 antigen-like 2 isoform E4
alt prot [213aa] CD99 antigen-like 2 isoform E3-E4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         25           1
 C cysteine            1.1          3           1
 D aspartate          10.3         27           2
 E glutamate           4.6         12           2
 F phenylalanine       3.1          8           1
 G glycine            11.1         29           4
 H histidine           1.1          3           1
 I isoleucine          3.1          8           1
 K lysine              5.3         14           2
 L leucine             6.5         17           1
 M methionine          1.1          3           1
 N asparagine          3.4          9           1
 P proline             7.3         19           5
 Q glutamine           3.4          9           2
 R arginine            6.1         16           2
 S serine              6.1         16           2
 T threonine           7.6         20           6
 V valine              5.7         15           2
 W tryptophan          1.1          3           1
 Y tyrosine            2.3          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CD99 antigen-like 2 isoform E3'-E4'-E3-E4 
CD99L2                0.751   CD99 antigen-like 2 isoform E3-E4 
CD99L2                0.577   CD99 antigen-like 2 isoform E4 
CD99                  0.107   CD99 antigen isoform a precursor 
CD99                  0.089   CD99 antigen isoform b precursor 
XG                    0.041   XG glycoprotein isoform 3 precursor 
XG                    0.037   XG glycoprotein isoform 2 precursor 
XG                    0.037   XG glycoprotein isoform 1 precursor 
FOXO3                 0.017   forkhead box O3A 
FOXO3                 0.017   forkhead box O3A 
MUPCDH                0.017   mucin and cadherin-like isoform 1 
KANK1                 0.014   KN motif and ankyrin repeat domains 1 isoform b [Hom...
KANK1                 0.014   KN motif and ankyrin repeat domains 1 isoform a [Hom...
SHROOM3               0.014   shroom family member 3 protein 
NOLC1                 0.014   nucleolar and coiled-body phosphoprotein 1 
PCNXL3                0.014   pecanex-like 3 
ZNF516                0.014   zinc finger protein 516 
PRDM16                0.012   PR domain containing 16 isoform 2 
PRDM16                0.012   PR domain containing 16 isoform 1 
LDB2                  0.010   LIM domain binding 2 isoform a 
LRRC68                0.010   PREDICTED: leucine rich repeat containing 68 
LRRC68                0.010   PREDICTED: leucine rich repeat containing 68 
LRRC68                0.010   PREDICTED: leucine rich repeat containing 68 
MNX1                  0.010   homeo box HB9 
SFRS2IP               0.008   splicing factor, arginine/serine-rich 2, interactin...
MUC12                 0.008   PREDICTED: mucin 12 
MUC12                 0.008   PREDICTED: mucin 12, cell surface associated 
OSBPL9                0.008   oxysterol binding protein-like 9 isoform e 
OSBPL9                0.008   oxysterol binding protein-like 9 isoform f 
OSBPL9                0.008   oxysterol binding protein-like 9 isoform d 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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