Guide to the Human Genome
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Name: OSBPL9 Sequence: fasta or formatted (736aa) NCBI GI: 20070331
Description:

oxysterol binding protein-like 9 isoform e

Referenced in:

Oxysterol-binding Protein Family

Other entries for this name:
alt prot [558aa] oxysterol binding protein-like 9 isoform a
alt prot [558aa] oxysterol binding protein-like 9 isoform a
alt prot [571aa] oxysterol binding protein-like 9 isoform b
alt prot [626aa] oxysterol binding protein-like 9 isoform c
alt prot [723aa] oxysterol binding protein-like 9 isoform d
alt prot [746aa] oxysterol binding protein-like 9 isoform f
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         38           2
 C cysteine            1.6         12           1
 D aspartate           6.7         49           3
 E glutamate           7.5         55           2
 F phenylalanine       4.1         30           2
 G glycine             5.4         40           2
 H histidine           3.7         27           2
 I isoleucine          5.4         40           2
 K lysine              7.2         53           3
 L leucine             8.2         60           2
 M methionine          1.9         14           2
 N asparagine          3.8         28           1
 P proline             5.2         38           2
 Q glutamine           3.8         28           1
 R arginine            4.2         31           2
 S serine              9.8         72           3
 T threonine           5.8         43           2
 V valine              6.0         44           2
 W tryptophan          1.8         13           1
 Y tyrosine            2.9         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   oxysterol binding protein-like 9 isoform e 
OSBPL9                0.976   oxysterol binding protein-like 9 isoform d 
OSBPL9                0.967   oxysterol binding protein-like 9 isoform f 
OSBPL9                0.828   oxysterol binding protein-like 9 isoform c 
OSBPL9                0.774   oxysterol binding protein-like 9 isoform b 
OSBPL9                0.751   oxysterol binding protein-like 9 isoform a 
OSBPL9                0.751   oxysterol binding protein-like 9 isoform a 
OSBPL11               0.278   oxysterol binding protein-like 11 
OSBPL10               0.272   oxysterol-binding protein-like protein 10 
OSBPL8                0.143   oxysterol-binding protein-like protein 8 isoform b [...
OSBPL8                0.143   oxysterol-binding protein-like protein 8 isoform a [...
OSBPL5                0.132   oxysterol-binding protein-like protein 5 isoform a [...
OSBPL5                0.132   oxysterol-binding protein-like protein 5 isoform b ...
OSBPL5                0.132   oxysterol-binding protein-like protein 5 isoform b [...
OSBPL1A               0.088   oxysterol-binding protein-like 1A isoform B 
OSBPL1A               0.067   oxysterol-binding protein-like 1A isoform A 
OSBP                  0.061   oxysterol binding protein 
OSBPL2                0.057   oxysterol-binding protein-like protein 2 isoform 2 [...
OSBPL2                0.057   oxysterol-binding protein-like protein 2 isoform 1 [H...
OSBP2                 0.052   oxysterol binding protein 2 isoform a 
OSBPL3                0.051   oxysterol-binding protein-like protein 3 isoform d [...
OSBPL6                0.050   oxysterol-binding protein-like protein 6 isoform b [...
OSBPL6                0.050   oxysterol-binding protein-like protein 6 isoform a [...
OSBPL3                0.044   oxysterol-binding protein-like protein 3 isoform c [...
OSBPL3                0.044   oxysterol-binding protein-like protein 3 isoform b [...
OSBPL3                0.044   oxysterol-binding protein-like protein 3 isoform a [...
PLEKHA3               0.043   pleckstrin homology domain containing, family A (pho...
OSBPL7                0.041   oxysterol-binding protein-like protein 7 
COL4A3BP              0.039   alpha 3 type IV collagen binding protein isoform 2 [...
COL4A3BP              0.039   alpha 3 type IV collagen binding protein isoform 3 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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