Guide to the Human Genome
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Name: CD99L2 Sequence: fasta or formatted (190aa) NCBI GI: 41281656
Description:

CD99 antigen-like 2 isoform E4

Referenced in:

Hematopoiesis and Erythrocytes

Other entries for this name:
alt prot [213aa] CD99 antigen-like 2 isoform E3-E4
alt prot [262aa] CD99 antigen-like 2 isoform E3'-E4'-E3-E4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         19           1
 C cysteine            1.6          3           1
 D aspartate          10.5         20           2
 E glutamate           5.8         11           2
 F phenylalanine       4.2          8           1
 G glycine            11.1         21           4
 H histidine           0.5          1           1
 I isoleucine          3.7          7           1
 K lysine              5.8         11           2
 L leucine             6.8         13           1
 M methionine          1.6          3           1
 N asparagine          3.2          6           1
 P proline             5.8         11           5
 Q glutamine           3.7          7           2
 R arginine            4.7          9           2
 S serine              7.9         15           2
 T threonine           2.6          5           1
 V valine              6.8         13           2
 W tryptophan          0.5          1           1
 Y tyrosine            3.2          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CD99 antigen-like 2 isoform E4 
CD99L2                0.959   CD99 antigen-like 2 isoform E3-E4 
CD99L2                0.876   CD99 antigen-like 2 isoform E3'-E4'-E3-E4 
CD99                  0.138   CD99 antigen isoform a precursor 
CD99                  0.135   CD99 antigen isoform b precursor 
XG                    0.052   XG glycoprotein isoform 1 precursor 
XG                    0.050   XG glycoprotein isoform 3 precursor 
XG                    0.044   XG glycoprotein isoform 2 precursor 
KANK1                 0.019   KN motif and ankyrin repeat domains 1 isoform b [Hom...
KANK1                 0.019   KN motif and ankyrin repeat domains 1 isoform a [Hom...
TPR                   0.019   nuclear pore complex-associated protein TPR 
LOC100290519          0.019   PREDICTED: hypothetical protein XP_002346939 
PRDM16                0.019   PR domain containing 16 isoform 2 
PRDM16                0.019   PR domain containing 16 isoform 1 
DENND1B               0.014   DENN/MADD domain containing 1B isoform 1 
DENND1B               0.014   DENN/MADD domain containing 1B isoform 2 
LRRC68                0.014   PREDICTED: leucine rich repeat containing 68 
LRRC68                0.014   PREDICTED: leucine rich repeat containing 68 
LRRC68                0.014   PREDICTED: leucine rich repeat containing 68 
MNX1                  0.014   homeo box HB9 
KIF3C                 0.011   kinesin family member 3C 
RRP12                 0.011   ribosomal RNA processing 12 homolog isoform 2 [Homo...
RRP12                 0.011   ribosomal RNA processing 12 homolog isoform 1 [Homo...
FOXO3                 0.011   forkhead box O3A 
FOXO3                 0.011   forkhead box O3A 
MYO18A                0.008   myosin 18A isoform b 
MYO18A                0.008   myosin 18A isoform a 
ARID1B                0.008   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.008   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.008   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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