Guide to the Human Genome
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Name: XG Sequence: fasta or formatted (180aa) NCBI GI: 28212220
Description:

XG glycoprotein isoform 1 precursor

Referenced in:

Hematopoiesis and Erythrocytes

Other entries for this name:
alt prot [195aa] XG glycoprotein isoform 2 precursor
alt prot [181aa] XG glycoprotein isoform 3 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0          9           3
 C cysteine            1.7          3           1
 D aspartate           7.2         13           2
 E glutamate           3.3          6           1
 F phenylalanine       3.3          6           1
 G glycine            11.7         21           6
 H histidine           2.8          5           2
 I isoleucine          2.2          4           1
 K lysine              3.9          7           2
 L leucine             5.0          9           2
 M methionine          1.7          3           1
 N asparagine          7.8         14           2
 P proline            14.4         26           2
 Q glutamine           2.2          4           1
 R arginine            6.7         12           2
 S serine              6.7         12           2
 T threonine           2.8          5           1
 V valine              5.0          9           4
 W tryptophan          1.1          2           2
 Y tyrosine            5.6         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   XG glycoprotein isoform 1 precursor 
XG                    0.987   XG glycoprotein isoform 3 precursor 
XG                    0.973   XG glycoprotein isoform 2 precursor 
CD99                  0.078   CD99 antigen isoform a precursor 
CD99                  0.078   CD99 antigen isoform b precursor 
CD99L2                0.064   CD99 antigen-like 2 isoform E3-E4 
CD99L2                0.051   CD99 antigen-like 2 isoform E4 
CD99L2                0.051   CD99 antigen-like 2 isoform E3'-E4'-E3-E4 
DUSP8                 0.040   dual specificity phosphatase 8 
CNOT3                 0.038   CCR4-NOT transcription complex, subunit 3 
FMNL1                 0.035   formin-like 1 
HNRNPUL1              0.035   heterogeneous nuclear ribonucleoprotein U-like 1 iso...
HNRNPUL1              0.035   heterogeneous nuclear ribonucleoprotein U-like 1 iso...
FOXG1                 0.035   forkhead box G1 
SFPQ                  0.035   splicing factor proline/glutamine rich (polypyrimidin...
HMX3                  0.032   H6 family homeobox 3 
ARID1A                0.032   AT rich interactive domain 1A isoform a 
ARID1A                0.032   AT rich interactive domain 1A isoform b 
PRNP                  0.032   prion protein preproprotein 
PRNP                  0.032   prion protein preproprotein 
PRNP                  0.032   prion protein preproprotein 
PRNP                  0.032   prion protein preproprotein 
PRNP                  0.032   prion protein preproprotein 
PPP1R10               0.032   protein phosphatase 1, regulatory subunit 10 
FOXC1                 0.032   forkhead box C1 
GRINA                 0.032   glutamate receptor, ionotropic, N-methyl D-aspartate...
GRINA                 0.032   glutamate receptor, ionotropic, N-methyl D-aspartate...
FMN1                  0.032   formin 1 
MEF2D                 0.032   myocyte enhancer factor 2D 
FUS                   0.032   fusion (involved in t(12;16) in malignant liposarcoma...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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