Guide to the Human Genome
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Name: OSBPL9 Sequence: fasta or formatted (746aa) NCBI GI: 22547176
Description:

oxysterol binding protein-like 9 isoform f

Referenced in:

Oxysterol-binding Protein Family

Other entries for this name:
alt prot [736aa] oxysterol binding protein-like 9 isoform e
alt prot [558aa] oxysterol binding protein-like 9 isoform a
alt prot [558aa] oxysterol binding protein-like 9 isoform a
alt prot [571aa] oxysterol binding protein-like 9 isoform b
alt prot [626aa] oxysterol binding protein-like 9 isoform c
alt prot [723aa] oxysterol binding protein-like 9 isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         37           2
 C cysteine            1.6         12           1
 D aspartate           6.3         47           3
 E glutamate           7.4         55           2
 F phenylalanine       4.4         33           2
 G glycine             5.4         40           2
 H histidine           3.5         26           2
 I isoleucine          5.8         43           2
 K lysine              7.1         53           3
 L leucine             8.3         62           2
 M methionine          1.7         13           2
 N asparagine          3.6         27           1
 P proline             5.2         39           2
 Q glutamine           3.8         28           1
 R arginine            4.2         31           2
 S serine             10.2         76           3
 T threonine           6.0         45           2
 V valine              6.0         45           2
 W tryptophan          1.7         13           1
 Y tyrosine            2.8         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   oxysterol binding protein-like 9 isoform f 
OSBPL9                0.963   oxysterol binding protein-like 9 isoform d 
OSBPL9                0.957   oxysterol binding protein-like 9 isoform e 
OSBPL9                0.826   oxysterol binding protein-like 9 isoform c 
OSBPL9                0.749   oxysterol binding protein-like 9 isoform a 
OSBPL9                0.749   oxysterol binding protein-like 9 isoform a 
OSBPL9                0.743   oxysterol binding protein-like 9 isoform b 
OSBPL11               0.275   oxysterol binding protein-like 11 
OSBPL10               0.269   oxysterol-binding protein-like protein 10 
OSBPL8                0.142   oxysterol-binding protein-like protein 8 isoform b [...
OSBPL8                0.142   oxysterol-binding protein-like protein 8 isoform a [...
OSBPL5                0.131   oxysterol-binding protein-like protein 5 isoform a [...
OSBPL5                0.131   oxysterol-binding protein-like protein 5 isoform b ...
OSBPL5                0.131   oxysterol-binding protein-like protein 5 isoform b [...
OSBPL1A               0.087   oxysterol-binding protein-like 1A isoform B 
OSBPL1A               0.066   oxysterol-binding protein-like 1A isoform A 
OSBP                  0.059   oxysterol binding protein 
OSBPL2                0.056   oxysterol-binding protein-like protein 2 isoform 2 [...
OSBPL2                0.056   oxysterol-binding protein-like protein 2 isoform 1 [H...
OSBPL6                0.049   oxysterol-binding protein-like protein 6 isoform b [...
OSBPL6                0.049   oxysterol-binding protein-like protein 6 isoform a [...
OSBP2                 0.048   oxysterol binding protein 2 isoform a 
OSBPL3                0.048   oxysterol-binding protein-like protein 3 isoform d [...
OSBPL3                0.043   oxysterol-binding protein-like protein 3 isoform c [...
OSBPL3                0.043   oxysterol-binding protein-like protein 3 isoform b [...
OSBPL3                0.043   oxysterol-binding protein-like protein 3 isoform a [...
OSBPL7                0.041   oxysterol-binding protein-like protein 7 
PLEKHA3               0.039   pleckstrin homology domain containing, family A (pho...
COL4A3BP              0.038   alpha 3 type IV collagen binding protein isoform 2 [...
COL4A3BP              0.038   alpha 3 type IV collagen binding protein isoform 3 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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