BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|70608168 interferon induced transmembrane protein 5 [Homo sapiens] (132 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|70608168 interferon induced transmembrane protein 5 [Homo sap... 271 1e-73 gi|148612842 interferon-induced transmembrane protein 3 (1-8U) [... 87 3e-18 gi|150010589 interferon induced transmembrane protein 1 (9-27) [... 84 4e-17 gi|151101191 interferon induced transmembrane protein 2 (1-8D) [... 83 6e-17 gi|156523246 proline-rich transmembrane protein 2 [Homo sapiens] 37 0.005 gi|169178462 PREDICTED: similar to NG5 protein [Homo sapiens] 36 0.010 gi|113421234 PREDICTED: similar to NG5 protein [Homo sapiens] 36 0.010 gi|113420954 PREDICTED: similar to NG5 protein [Homo sapiens] 36 0.010 gi|211904185 hypothetical protein LOC387890 [Homo sapiens] 35 0.022 gi|13376347 hypothetical protein LOC79953 [Homo sapiens] 31 0.32 gi|219689113 two pore segment channel 1 isoform 1 [Homo sapiens] 30 0.42 gi|29725622 two pore segment channel 1 isoform 2 [Homo sapiens] 30 0.42 gi|136255216 proline-rich transmembrane protein 3 [Homo sapiens] 30 0.72 gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 29 0.94 gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof... 29 0.94 gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isof... 29 0.94 gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isof... 29 0.94 gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isof... 29 0.94 gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isof... 29 0.94 gi|31881630 prostaglandin E receptor 2 (subtype EP2), 53kDa [Hom... 28 1.6 gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 28 1.6 gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens] 28 1.6 gi|169204921 PREDICTED: chromosome 12 open reading frame 55 [Hom... 27 3.6 gi|169205589 PREDICTED: chromosome 12 open reading frame 55 [Hom... 27 3.6 gi|169203876 PREDICTED: hypothetical protein [Homo sapiens] 27 3.6 gi|157743286 transmembrane protein 90A [Homo sapiens] 27 3.6 gi|4507693 tuberous sclerosis 1 protein isoform 1 [Homo sapiens] 27 4.7 gi|241666464 tuberous sclerosis 1 protein isoform 4 [Homo sapiens] 27 4.7 gi|241666462 tuberous sclerosis 1 protein isoform 3 [Homo sapiens] 27 4.7 gi|126723564 pecanex-like 1 [Homo sapiens] 27 6.1 >gi|70608168 interferon induced transmembrane protein 5 [Homo sapiens] Length = 132 Score = 271 bits (693), Expect = 1e-73 Identities = 132/132 (100%), Positives = 132/132 (100%) Query: 1 MDTAYPREDTRAPTPSKAGAHTALTLGAPHPPPRDHLIWSVFSTLYLNLCCLGFLALAYS 60 MDTAYPREDTRAPTPSKAGAHTALTLGAPHPPPRDHLIWSVFSTLYLNLCCLGFLALAYS Sbjct: 1 MDTAYPREDTRAPTPSKAGAHTALTLGAPHPPPRDHLIWSVFSTLYLNLCCLGFLALAYS 60 Query: 61 IKARDQKVVGDLEAARRFGSKAKCYNILAAMWTLVPPLLLLGLVVTGALHLARLAKDSAA 120 IKARDQKVVGDLEAARRFGSKAKCYNILAAMWTLVPPLLLLGLVVTGALHLARLAKDSAA Sbjct: 61 IKARDQKVVGDLEAARRFGSKAKCYNILAAMWTLVPPLLLLGLVVTGALHLARLAKDSAA 120 Query: 121 FFSTKFDDADYD 132 FFSTKFDDADYD Sbjct: 121 FFSTKFDDADYD 132 >gi|148612842 interferon-induced transmembrane protein 3 (1-8U) [Homo sapiens] Length = 133 Score = 87.4 bits (215), Expect = 3e-18 Identities = 42/100 (42%), Positives = 62/100 (62%), Gaps = 15/100 (15%) Query: 21 HTALTLGAPHPPPR---------------DHLIWSVFSTLYLNLCCLGFLALAYSIKARD 65 H LGAPH P DH++WS+F+TL++N CCLGF+A AYS+K+RD Sbjct: 27 HEVAVLGAPHNPAPPTSTVIHIRSETSVPDHVVWSLFNTLFMNPCCLGFIAFAYSVKSRD 86 Query: 66 QKVVGDLEAARRFGSKAKCYNILAAMWTLVPPLLLLGLVV 105 +K+VGD+ A+ + S AKC NI A + ++ +LL+ + V Sbjct: 87 RKMVGDVTGAQAYASTAKCLNIWALILGILMTILLIVIPV 126 >gi|150010589 interferon induced transmembrane protein 1 (9-27) [Homo sapiens] Length = 125 Score = 83.6 bits (205), Expect = 4e-17 Identities = 36/75 (48%), Positives = 57/75 (76%) Query: 35 DHLIWSVFSTLYLNLCCLGFLALAYSIKARDQKVVGDLEAARRFGSKAKCYNILAAMWTL 94 DH++WS+F+TL+LN CCLGF+A AYS+K+RD+K+VGD+ A+ + S AKC NI A + + Sbjct: 35 DHVVWSLFNTLFLNWCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGI 94 Query: 95 VPPLLLLGLVVTGAL 109 + + + L+V G++ Sbjct: 95 LMTIGFILLLVFGSV 109 >gi|151101191 interferon induced transmembrane protein 2 (1-8D) [Homo sapiens] Length = 132 Score = 83.2 bits (204), Expect = 6e-17 Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 15/91 (16%) Query: 26 LGAPHPPPR---------------DHLIWSVFSTLYLNLCCLGFLALAYSIKARDQKVVG 70 LG PH P DH++WS+F+TL++N CCLGF+A AYS+K+RD+K+VG Sbjct: 31 LGVPHNPAPPMSTVIHIRSETSVPDHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVG 90 Query: 71 DLEAARRFGSKAKCYNILAAMWTLVPPLLLL 101 D+ A+ + S AKC NI A + + +LL+ Sbjct: 91 DVTGAQAYASTAKCLNIWALILGIFMTILLI 121 >gi|156523246 proline-rich transmembrane protein 2 [Homo sapiens] Length = 340 Score = 37.0 bits (84), Expect = 0.005 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%) Query: 15 PSKAGAHTALTLGAPHPPPRDHLIWSVFSTLYLNLCCLGFLALAYSIKARDQKVVGDLEA 74 PS A + G PRD++I ++ S + + + +A AY++ +R+ GD++ Sbjct: 247 PSSQLAGPGVEGGEGTQKPRDYIILAILSC-FCPMWPVNIVAFAYAVMSRNSLQQGDVDG 305 Query: 75 ARRFGSKAKCYNILA 89 A+R G AK +I+A Sbjct: 306 AQRLGRVAKLLSIVA 320 >gi|169178462 PREDICTED: similar to NG5 protein [Homo sapiens] Length = 93 Score = 35.8 bits (81), Expect = 0.010 Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 5/55 (9%) Query: 31 PPPRDHLIWSVFSTLYLNLCCL--GFLALAYSIKARDQKVVGDLEAARRFGSKAK 83 P P+D+++ SV TL+ CCL G +A+ YS +AR GDL A KA+ Sbjct: 14 PLPKDYMMESVLVTLF---CCLLTGLIAIVYSHEARAALGRGDLAQAEEASRKAR 65 >gi|113421234 PREDICTED: similar to NG5 protein [Homo sapiens] Length = 288 Score = 35.8 bits (81), Expect = 0.010 Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 5/55 (9%) Query: 31 PPPRDHLIWSVFSTLYLNLCCL--GFLALAYSIKARDQKVVGDLEAARRFGSKAK 83 P P+D+++ SV TL+ CCL G +A+ YS +AR GDL A KA+ Sbjct: 209 PLPKDYMMESVLVTLF---CCLLTGLIAIVYSHEARAALGRGDLAQAEEASRKAR 260 >gi|113420954 PREDICTED: similar to NG5 protein [Homo sapiens] Length = 288 Score = 35.8 bits (81), Expect = 0.010 Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 5/55 (9%) Query: 31 PPPRDHLIWSVFSTLYLNLCCL--GFLALAYSIKARDQKVVGDLEAARRFGSKAK 83 P P+D+++ SV TL+ CCL G +A+ YS +AR GDL A KA+ Sbjct: 209 PLPKDYMMESVLVTLF---CCLLTGLIAIVYSHEARAALGRGDLAQAEEASRKAR 260 >gi|211904185 hypothetical protein LOC387890 [Homo sapiens] Length = 109 Score = 34.7 bits (78), Expect = 0.022 Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 7/85 (8%) Query: 31 PPPRDHLIWSVFSTLYLNLCCLGFLALAYSIKARDQKVVGDLEAARRFGSKAKCYNILAA 90 P P+++L W + + + +AL +SI + + GD E ARR G AK A Sbjct: 32 PMPKNYL-WLTIVSCFCPAYPINIVALVFSIMSLNSYNDGDYEGARRLGRNAK----WVA 86 Query: 91 MWTLVPPLLLLGLVVTGALHLARLA 115 + +++ LL++G ++ A+H R A Sbjct: 87 IASIIIGLLIIG--ISCAVHFTRNA 109 >gi|13376347 hypothetical protein LOC79953 [Homo sapiens] Length = 258 Score = 30.8 bits (68), Expect = 0.32 Identities = 23/61 (37%), Positives = 27/61 (44%), Gaps = 7/61 (11%) Query: 32 PPRDHLIWSVFSTLYLNLCC---LGFLALAYSIKARDQKVVGDLEAARRFGSKAKCYNIL 88 PPRDHL SVFS LCC LG A S + GDL A +A +L Sbjct: 177 PPRDHLGLSVFSM----LCCFWPLGIAAFYLSHETNKAVAKGDLHQASTSSRRALFLAVL 232 Query: 89 A 89 + Sbjct: 233 S 233 >gi|219689113 two pore segment channel 1 isoform 1 [Homo sapiens] Length = 888 Score = 30.4 bits (67), Expect = 0.42 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 39 WSVFSTLYLNLCCLGFLALAYSIKARDQKVV-GDLEAARRFGSKAKCYNILAAMWTLVPP 97 W++F LG LALA +++ VV L+ R F K + N+L M+ L+P Sbjct: 579 WNLFDFSVTVFAFLGLLALALNMEPFYFIVVLRPLQLLRLFKLKERYRNVLDTMFELLPR 638 Query: 98 LLLLGLVV 105 + LGL + Sbjct: 639 MASLGLTL 646 >gi|29725622 two pore segment channel 1 isoform 2 [Homo sapiens] Length = 816 Score = 30.4 bits (67), Expect = 0.42 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 39 WSVFSTLYLNLCCLGFLALAYSIKARDQKVV-GDLEAARRFGSKAKCYNILAAMWTLVPP 97 W++F LG LALA +++ VV L+ R F K + N+L M+ L+P Sbjct: 507 WNLFDFSVTVFAFLGLLALALNMEPFYFIVVLRPLQLLRLFKLKERYRNVLDTMFELLPR 566 Query: 98 LLLLGLVV 105 + LGL + Sbjct: 567 MASLGLTL 574 >gi|136255216 proline-rich transmembrane protein 3 [Homo sapiens] Length = 981 Score = 29.6 bits (65), Expect = 0.72 Identities = 11/29 (37%), Positives = 17/29 (58%) Query: 6 PREDTRAPTPSKAGAHTALTLGAPHPPPR 34 P E+ TP +AGA + + +P PPP+ Sbjct: 280 PAEELPVETPKRAGAEVSWEVSSPGPPPK 308 >gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform 9 [Homo sapiens] Length = 771 Score = 29.3 bits (64), Expect = 0.94 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Query: 69 VGDLEAARRFGSKAKCYN-ILAAMWTLVPPLLL 100 VGD AR +GS K Y ++ +W P LLL Sbjct: 554 VGDFGLAREYGSPLKAYTPVVVTLWYRAPELLL 586 >gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform 8 [Homo sapiens] Length = 780 Score = 29.3 bits (64), Expect = 0.94 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Query: 69 VGDLEAARRFGSKAKCYN-ILAAMWTLVPPLLL 100 VGD AR +GS K Y ++ +W P LLL Sbjct: 563 VGDFGLAREYGSPLKAYTPVVVTLWYRAPELLL 595 >gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isoform 5 [Homo sapiens] Length = 748 Score = 29.3 bits (64), Expect = 0.94 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Query: 69 VGDLEAARRFGSKAKCYN-ILAAMWTLVPPLLL 100 VGD AR +GS K Y ++ +W P LLL Sbjct: 531 VGDFGLAREYGSPLKAYTPVVVTLWYRAPELLL 563 >gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isoform 4 [Homo sapiens] Length = 737 Score = 29.3 bits (64), Expect = 0.94 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Query: 69 VGDLEAARRFGSKAKCYN-ILAAMWTLVPPLLL 100 VGD AR +GS K Y ++ +W P LLL Sbjct: 520 VGDFGLAREYGSPLKAYTPVVVTLWYRAPELLL 552 >gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isoform 3 [Homo sapiens] Length = 526 Score = 29.3 bits (64), Expect = 0.94 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Query: 69 VGDLEAARRFGSKAKCYN-ILAAMWTLVPPLLL 100 VGD AR +GS K Y ++ +W P LLL Sbjct: 309 VGDFGLAREYGSPLKAYTPVVVTLWYRAPELLL 341 >gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isoform 2 [Homo sapiens] Length = 782 Score = 29.3 bits (64), Expect = 0.94 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Query: 69 VGDLEAARRFGSKAKCYN-ILAAMWTLVPPLLL 100 VGD AR +GS K Y ++ +W P LLL Sbjct: 565 VGDFGLAREYGSPLKAYTPVVVTLWYRAPELLL 597 >gi|31881630 prostaglandin E receptor 2 (subtype EP2), 53kDa [Homo sapiens] Length = 358 Score = 28.5 bits (62), Expect = 1.6 Identities = 15/42 (35%), Positives = 20/42 (47%) Query: 35 DHLIWSVFSTLYLNLCCLGFLALAYSIKARDQKVVGDLEAAR 76 DHLI T+ +C L F AY + +K DL+A R Sbjct: 261 DHLILLAIMTITFAVCSLPFTIFAYMNETSSRKEKWDLQALR 302 >gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] Length = 770 Score = 28.5 bits (62), Expect = 1.6 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%) Query: 69 VGDLEAARRFGSKAKCYN-ILAAMWTLVPPLLL 100 VGD AR +GS K Y ++ W P LLL Sbjct: 553 VGDFGLAREYGSPLKAYTPVVVTQWYRAPELLL 585 >gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens] Length = 780 Score = 28.5 bits (62), Expect = 1.6 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%) Query: 69 VGDLEAARRFGSKAKCYN-ILAAMWTLVPPLLL 100 VGD AR +GS K Y ++ W P LLL Sbjct: 563 VGDFGLAREYGSPLKAYTPVVVTQWYRAPELLL 595 >gi|169204921 PREDICTED: chromosome 12 open reading frame 55 [Homo sapiens] Length = 935 Score = 27.3 bits (59), Expect = 3.6 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Query: 33 PRDHLIWSVFS-TLYLNLCCLGFLALAYSIKA 63 P++HL W +F+ T+Y+ C + + S KA Sbjct: 236 PQEHLCWIIFNGTIYIYTICRKLMVIGQSSKA 267 >gi|169205589 PREDICTED: chromosome 12 open reading frame 55 [Homo sapiens] Length = 1241 Score = 27.3 bits (59), Expect = 3.6 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Query: 33 PRDHLIWSVFS-TLYLNLCCLGFLALAYSIKA 63 P++HL W +F+ T+Y+ C + + S KA Sbjct: 236 PQEHLCWIIFNGTIYIYTICRKLMVIGQSSKA 267 >gi|169203876 PREDICTED: hypothetical protein [Homo sapiens] Length = 1241 Score = 27.3 bits (59), Expect = 3.6 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Query: 33 PRDHLIWSVFS-TLYLNLCCLGFLALAYSIKA 63 P++HL W +F+ T+Y+ C + + S KA Sbjct: 236 PQEHLCWIIFNGTIYIYTICRKLMVIGQSSKA 267 >gi|157743286 transmembrane protein 90A [Homo sapiens] Length = 238 Score = 27.3 bits (59), Expect = 3.6 Identities = 31/109 (28%), Positives = 45/109 (41%), Gaps = 15/109 (13%) Query: 8 EDTRAPTPSKAGAHTALTLGAPHPPPRDHLIWSVFSTLYLNLCC---LGFLALAYSIKAR 64 E++ A + LTL PPRDHL ++FS LCC LG A +S Sbjct: 138 EESDATSTESESEDNFLTL-----PPRDHLGLTLFSM----LCCFWPLGIAAFYFSQGTS 188 Query: 65 DQKVVGDLEAARRFGSKAKCYNILAAMWTLVPPLLLLGLVVTGALHLAR 113 GD A +A LA + V L + +VV A ++++ Sbjct: 189 KAISKGDFRLASTTSRRAL---FLATLAIAVGAGLYVAVVVALAAYMSQ 234 >gi|4507693 tuberous sclerosis 1 protein isoform 1 [Homo sapiens] Length = 1164 Score = 26.9 bits (58), Expect = 4.7 Identities = 11/25 (44%), Positives = 14/25 (56%) Query: 13 PTPSKAGAHTALTLGAPHPPPRDHL 37 P+P K T + G+ PPP DHL Sbjct: 583 PSPCKIPPPTRVGFGSGQPPPYDHL 607 >gi|241666464 tuberous sclerosis 1 protein isoform 4 [Homo sapiens] Length = 1113 Score = 26.9 bits (58), Expect = 4.7 Identities = 11/25 (44%), Positives = 14/25 (56%) Query: 13 PTPSKAGAHTALTLGAPHPPPRDHL 37 P+P K T + G+ PPP DHL Sbjct: 532 PSPCKIPPPTRVGFGSGQPPPYDHL 556 >gi|241666462 tuberous sclerosis 1 protein isoform 3 [Homo sapiens] Length = 1163 Score = 26.9 bits (58), Expect = 4.7 Identities = 11/25 (44%), Positives = 14/25 (56%) Query: 13 PTPSKAGAHTALTLGAPHPPPRDHL 37 P+P K T + G+ PPP DHL Sbjct: 582 PSPCKIPPPTRVGFGSGQPPPYDHL 606 >gi|126723564 pecanex-like 1 [Homo sapiens] Length = 2341 Score = 26.6 bits (57), Expect = 6.1 Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 26/88 (29%) Query: 40 SVFSTLYLNLCCLGFLALAYSIKARDQKVVGDLEAARRFGSKAKCYNILAAMWT--LVPP 97 S+ + LY +C + +AL Y + CY L W +P Sbjct: 1159 SLLAALYSFICSIVAVALLYGL----------------------CYGALKDSWDGQHIPV 1196 Query: 98 L--LLLGLVVTGALHLARLAKDSAAFFS 123 L + GL+V + HL+R + D + FS Sbjct: 1197 LFSIFCGLLVAVSYHLSRQSSDPSVLFS 1224 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.324 0.137 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,573,659 Number of Sequences: 37866 Number of extensions: 235082 Number of successful extensions: 1095 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 23 Number of HSP's that attempted gapping in prelim test: 1080 Number of HSP's gapped (non-prelim): 37 length of query: 132 length of database: 18,247,518 effective HSP length: 91 effective length of query: 41 effective length of database: 14,801,712 effective search space: 606870192 effective search space used: 606870192 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.5 bits) S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.