Guide to the Human Genome
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Name: PTGER2 Sequence: fasta or formatted (358aa) NCBI GI: 31881630
Description:

prostaglandin E receptor 2 (subtype EP2), 53kDa

Referenced in:

G-Protein-coupled Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         32           1
 C cysteine            3.6         13           2
 D aspartate           3.1         11           1
 E glutamate           3.1         11           2
 F phenylalanine       4.7         17           2
 G glycine             5.9         21           2
 H histidine           1.4          5           1
 I isoleucine          5.0         18           2
 K lysine              0.8          3           1
 L leucine            14.5         52           5
 M methionine          3.1         11           1
 N asparagine          2.2          8           1
 P proline             4.2         15           2
 Q glutamine           3.4         12           1
 R arginine            8.9         32           3
 S serine             10.6         38           2
 T threonine           5.6         20           1
 V valine              6.1         22           2
 W tryptophan          1.4          5           1
 Y tyrosine            3.4         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   prostaglandin E receptor 2 (subtype EP2), 53kDa [Hom... 
PTGDR                 0.344   prostaglandin D2 receptor 
PTGIR                 0.328   prostaglandin I2 (prostacyclin) receptor (IP) 
PTGER4                0.216   prostaglandin E receptor 4, subtype EP4 
PTGER3                0.157   prostaglandin E receptor 3, subtype EP3 isoform 4 [H...
PTGER3                0.157   prostaglandin E receptor 3, subtype EP3 isoform 4 [H...
PTGER3                0.157   prostaglandin E receptor 3, subtype EP3 isoform 4 [...
PTGER3                0.153   prostaglandin E receptor 3, subtype EP3 isoform 8 [H...
PTGER3                0.153   prostaglandin E receptor 3, subtype EP3 isoform 2 [H...
PTGER3                0.153   prostaglandin E receptor 3, subtype EP3 isoform 5 [H...
PTGER3                0.153   prostaglandin E receptor 3, subtype EP3 isoform 7 [H...
PTGER3                0.153   prostaglandin E receptor 3, subtype EP3 isoform 6 [H...
PTGER3                0.153   prostaglandin E receptor 3, subtype EP3 isoform 3 [H...
PTGER3                0.153   prostaglandin E receptor 3, subtype EP3 isoform 1 [H...
PTGER1                0.149   prostaglandin E receptor 1, subtype EP1 
TBXA2R                0.130   thromboxane A2 receptor 
PTGFR                 0.109   prostaglandin F receptor isoform a precursor 
PTGFR                 0.080   prostaglandin F receptor isoform b precursor 
AVPR2                 0.074   arginine vasopressin receptor 2 isoform 1 
GPR39                 0.050   G protein-coupled receptor 39 
GPR161                0.048   G protein-coupled receptor 161 isoform 2 
AVPR2                 0.048   arginine vasopressin receptor 2 isoform 2 
GPR173                0.042   G protein-coupled receptor 173 
GPR85                 0.041   G protein-coupled receptor 85 
GPR85                 0.041   G protein-coupled receptor 85 
GPR85                 0.041   G protein-coupled receptor 85 
GPR85                 0.041   G protein-coupled receptor 85 
GPR101                0.041   G protein-coupled receptor 101 
FFAR3                 0.041   free fatty acid receptor 3 
OPN4                  0.039   opsin 4 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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