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Search of human proteins with 13699813
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13699813 WHSC1L1 protein isoform short [Homo sapiens]
(645 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13699813 WHSC1L1 protein isoform short [Homo sapiens] 1290 0.0
gi|13699811 WHSC1L1 protein isoform long [Homo sapiens] 1244 0.0
gi|19913356 Wolf-Hirschhorn syndrome candidate 1 protein isoform... 202 8e-52
gi|19913358 Wolf-Hirschhorn syndrome candidate 1 protein isoform... 202 8e-52
gi|6594683 Wolf-Hirschhorn syndrome candidate 1 protein isoform ... 202 8e-52
gi|19913350 Wolf-Hirschhorn syndrome candidate 1 protein isoform... 202 8e-52
gi|19913348 Wolf-Hirschhorn syndrome candidate 1 protein isoform... 202 8e-52
gi|109633019 Wolf-Hirschhorn syndrome candidate 1 protein isofor... 202 8e-52
gi|19923586 nuclear receptor binding SET domain protein 1 isofor... 98 2e-20
gi|27477095 nuclear receptor binding SET domain protein 1 isofor... 89 1e-17
gi|4504191 mutS homolog 6 [Homo sapiens] 76 1e-13
gi|94721344 zinc finger, CW type with PWWP domain 1 [Homo sapiens] 53 1e-06
gi|40556376 cytokine-like nuclear factor n-pac [Homo sapiens] 51 4e-06
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 50 6e-06
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 49 1e-05
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 49 1e-05
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 49 1e-05
gi|115387118 hypothetical protein LOC57562 [Homo sapiens] 47 5e-05
gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens] 46 9e-05
gi|4758516 hepatoma-derived growth factor isoform a [Homo sapiens] 46 1e-04
gi|117553580 adaptor-related protein complex 3, delta 1 subunit ... 45 2e-04
gi|40788007 FYN binding protein (FYB-120/130) isoform 2 [Homo sa... 45 2e-04
gi|42476118 FYN binding protein (FYB-120/130) isoform 1 [Homo sa... 45 2e-04
gi|148746195 trichohyalin [Homo sapiens] 44 5e-04
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 43 8e-04
gi|87299628 biorientation of chromosomes in cell division 1-like... 43 0.001
gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo... 42 0.001
gi|104526627 triadin [Homo sapiens] 42 0.002
gi|150170670 piccolo isoform 2 [Homo sapiens] 41 0.003
gi|150378539 piccolo isoform 1 [Homo sapiens] 41 0.003
>gi|13699813 WHSC1L1 protein isoform short [Homo sapiens]
Length = 645
Score = 1290 bits (3338), Expect = 0.0
Identities = 645/645 (100%), Positives = 645/645 (100%)
Query: 1 MDFSFSFMQGIMGNTIQQPPQLIDSANIRQEDAFDNNSDIAEDGGQTPYEATLQQGFQYP 60
MDFSFSFMQGIMGNTIQQPPQLIDSANIRQEDAFDNNSDIAEDGGQTPYEATLQQGFQYP
Sbjct: 1 MDFSFSFMQGIMGNTIQQPPQLIDSANIRQEDAFDNNSDIAEDGGQTPYEATLQQGFQYP 60
Query: 61 ATTEDLPPLTNGYPSSISVYETQTKYQSYNQYPNGSANGFGAVRNFSPTDYYHSEIPNTR 120
ATTEDLPPLTNGYPSSISVYETQTKYQSYNQYPNGSANGFGAVRNFSPTDYYHSEIPNTR
Sbjct: 61 ATTEDLPPLTNGYPSSISVYETQTKYQSYNQYPNGSANGFGAVRNFSPTDYYHSEIPNTR 120
Query: 121 PHEILEKPSPPQPPPPPSVPQTVIPKKTGSPEIKLKITKTIQNGRELFESSLCGDLLNEV 180
PHEILEKPSPPQPPPPPSVPQTVIPKKTGSPEIKLKITKTIQNGRELFESSLCGDLLNEV
Sbjct: 121 PHEILEKPSPPQPPPPPSVPQTVIPKKTGSPEIKLKITKTIQNGRELFESSLCGDLLNEV 180
Query: 181 QASEHTKSKHESRKEKRKKSNKHDSSRSEERKSHKIPKLEPEEQNRPNERVDTVSEKPRE 240
QASEHTKSKHESRKEKRKKSNKHDSSRSEERKSHKIPKLEPEEQNRPNERVDTVSEKPRE
Sbjct: 181 QASEHTKSKHESRKEKRKKSNKHDSSRSEERKSHKIPKLEPEEQNRPNERVDTVSEKPRE 240
Query: 241 EPVLKEEAPVQPILSSVPTTEVSTGVKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKI 300
EPVLKEEAPVQPILSSVPTTEVSTGVKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKI
Sbjct: 241 EPVLKEEAPVQPILSSVPTTEVSTGVKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKI 300
Query: 301 NTRGAREYHVQFFSNQPERAWVHEKRVREYKGHKQYEELLAEATKQASNHSEKQKIRKPR 360
NTRGAREYHVQFFSNQPERAWVHEKRVREYKGHKQYEELLAEATKQASNHSEKQKIRKPR
Sbjct: 301 NTRGAREYHVQFFSNQPERAWVHEKRVREYKGHKQYEELLAEATKQASNHSEKQKIRKPR 360
Query: 361 PQRERAQWDIGIAHAEKALKMTREERIEQYTFIYIDKQPEEALSQAKKSVASKTEVKKTR 420
PQRERAQWDIGIAHAEKALKMTREERIEQYTFIYIDKQPEEALSQAKKSVASKTEVKKTR
Sbjct: 361 PQRERAQWDIGIAHAEKALKMTREERIEQYTFIYIDKQPEEALSQAKKSVASKTEVKKTR 420
Query: 421 RPRSVLNTQPEQTNAGEVASSLSSTEIRRHSQRRHTSAEEEEPPPVKIAWKTAAARKSLP 480
RPRSVLNTQPEQTNAGEVASSLSSTEIRRHSQRRHTSAEEEEPPPVKIAWKTAAARKSLP
Sbjct: 421 RPRSVLNTQPEQTNAGEVASSLSSTEIRRHSQRRHTSAEEEEPPPVKIAWKTAAARKSLP 480
Query: 481 ASITMHKGSLDLQKCNMSPVVKIEQVFALQNATGDGKFIDQFVYSTKGIGNKTEISVRGQ 540
ASITMHKGSLDLQKCNMSPVVKIEQVFALQNATGDGKFIDQFVYSTKGIGNKTEISVRGQ
Sbjct: 481 ASITMHKGSLDLQKCNMSPVVKIEQVFALQNATGDGKFIDQFVYSTKGIGNKTEISVRGQ 540
Query: 541 DRLIISTPNQRNEKPTQSVSSPEATSGSTGSVEKKQQRRSIRTRSESEKSTEVVPKKKIK 600
DRLIISTPNQRNEKPTQSVSSPEATSGSTGSVEKKQQRRSIRTRSESEKSTEVVPKKKIK
Sbjct: 541 DRLIISTPNQRNEKPTQSVSSPEATSGSTGSVEKKQQRRSIRTRSESEKSTEVVPKKKIK 600
Query: 601 KEQVETVPQATVKTGLQKGSADRGVQGSVRFSDSSVSAAIEETVD 645
KEQVETVPQATVKTGLQKGSADRGVQGSVRFSDSSVSAAIEETVD
Sbjct: 601 KEQVETVPQATVKTGLQKGSADRGVQGSVRFSDSSVSAAIEETVD 645
>gi|13699811 WHSC1L1 protein isoform long [Homo sapiens]
Length = 1437
Score = 1244 bits (3220), Expect = 0.0
Identities = 619/622 (99%), Positives = 622/622 (100%)
Query: 1 MDFSFSFMQGIMGNTIQQPPQLIDSANIRQEDAFDNNSDIAEDGGQTPYEATLQQGFQYP 60
MDFSFSFMQGIMGNTIQQPPQLIDSANIRQEDAFDNNSDIAEDGGQTPYEATLQQGFQYP
Sbjct: 1 MDFSFSFMQGIMGNTIQQPPQLIDSANIRQEDAFDNNSDIAEDGGQTPYEATLQQGFQYP 60
Query: 61 ATTEDLPPLTNGYPSSISVYETQTKYQSYNQYPNGSANGFGAVRNFSPTDYYHSEIPNTR 120
ATTEDLPPLTNGYPSSISVYETQTKYQSYNQYPNGSANGFGAVRNFSPTDYYHSEIPNTR
Sbjct: 61 ATTEDLPPLTNGYPSSISVYETQTKYQSYNQYPNGSANGFGAVRNFSPTDYYHSEIPNTR 120
Query: 121 PHEILEKPSPPQPPPPPSVPQTVIPKKTGSPEIKLKITKTIQNGRELFESSLCGDLLNEV 180
PHEILEKPSPPQPPPPPSVPQTVIPKKTGSPEIKLKITKTIQNGRELFESSLCGDLLNEV
Sbjct: 121 PHEILEKPSPPQPPPPPSVPQTVIPKKTGSPEIKLKITKTIQNGRELFESSLCGDLLNEV 180
Query: 181 QASEHTKSKHESRKEKRKKSNKHDSSRSEERKSHKIPKLEPEEQNRPNERVDTVSEKPRE 240
QASEHTKSKHESRKEKRKKSNKHDSSRSEERKSHKIPKLEPEEQNRPNERVDTVSEKPRE
Sbjct: 181 QASEHTKSKHESRKEKRKKSNKHDSSRSEERKSHKIPKLEPEEQNRPNERVDTVSEKPRE 240
Query: 241 EPVLKEEAPVQPILSSVPTTEVSTGVKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKI 300
EPVLKEEAPVQPILSSVPTTEVSTGVKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKI
Sbjct: 241 EPVLKEEAPVQPILSSVPTTEVSTGVKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKI 300
Query: 301 NTRGAREYHVQFFSNQPERAWVHEKRVREYKGHKQYEELLAEATKQASNHSEKQKIRKPR 360
NTRGAREYHVQFFSNQPERAWVHEKRVREYKGHKQYEELLAEATKQASNHSEKQKIRKPR
Sbjct: 301 NTRGAREYHVQFFSNQPERAWVHEKRVREYKGHKQYEELLAEATKQASNHSEKQKIRKPR 360
Query: 361 PQRERAQWDIGIAHAEKALKMTREERIEQYTFIYIDKQPEEALSQAKKSVASKTEVKKTR 420
PQRERAQWDIGIAHAEKALKMTREERIEQYTFIYIDKQPEEALSQAKKSVASKTEVKKTR
Sbjct: 361 PQRERAQWDIGIAHAEKALKMTREERIEQYTFIYIDKQPEEALSQAKKSVASKTEVKKTR 420
Query: 421 RPRSVLNTQPEQTNAGEVASSLSSTEIRRHSQRRHTSAEEEEPPPVKIAWKTAAARKSLP 480
RPRSVLNTQPEQTNAGEVASSLSSTEIRRHSQRRHTSAEEEEPPPVKIAWKTAAARKSLP
Sbjct: 421 RPRSVLNTQPEQTNAGEVASSLSSTEIRRHSQRRHTSAEEEEPPPVKIAWKTAAARKSLP 480
Query: 481 ASITMHKGSLDLQKCNMSPVVKIEQVFALQNATGDGKFIDQFVYSTKGIGNKTEISVRGQ 540
ASITMHKGSLDLQKCNMSPVVKIEQVFALQNATGDGKFIDQFVYSTKGIGNKTEISVRGQ
Sbjct: 481 ASITMHKGSLDLQKCNMSPVVKIEQVFALQNATGDGKFIDQFVYSTKGIGNKTEISVRGQ 540
Query: 541 DRLIISTPNQRNEKPTQSVSSPEATSGSTGSVEKKQQRRSIRTRSESEKSTEVVPKKKIK 600
DRLIISTPNQRNEKPTQSVSSPEATSGSTGSVEKKQQRRSIRTRSESEKSTEVVPKKKIK
Sbjct: 541 DRLIISTPNQRNEKPTQSVSSPEATSGSTGSVEKKQQRRSIRTRSESEKSTEVVPKKKIK 600
Query: 601 KEQVETVPQATVKTGLQKGSAD 622
KEQVETVPQATVKTGLQKG+++
Sbjct: 601 KEQVETVPQATVKTGLQKGASE 622
Score = 43.9 bits (102), Expect = 5e-04
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Query: 261 EVSTGVKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKINTRGAREYHVQFFSNQPERA 320
+ G K +VW K+G Y WWP + + + ++ + ++ V FF + +
Sbjct: 951 DCKAGKKLHYKQIVWVKLGNYRWWPAEICNPRSVPLNIQGLKHDLGDFPVFFFGSH-DYY 1009
Query: 321 WVHEKRVREY-KGHKQYEELLAEATKQASNHSEK--QKIRKPRPQRE 364
WVH+ RV Y +G K + E K E+ ++ ++ + QRE
Sbjct: 1010 WVHQGRVFPYVEGDKSFAEGQTSINKTFKKALEEAAKRFQELKAQRE 1056
>gi|19913356 Wolf-Hirschhorn syndrome candidate 1 protein isoform 3
[Homo sapiens]
Length = 647
Score = 202 bits (514), Expect = 8e-52
Identities = 155/500 (31%), Positives = 241/500 (48%), Gaps = 58/500 (11%)
Query: 140 PQTVIPKKTGSPEIKLKITKTIQNGRELFESSLCGDLLNEVQASEHTKSKHESR-KEKRK 198
P P K GSPEIKLKITKT NG+ LFESS+CGD +V SE K E++ + RK
Sbjct: 111 PPNTTPIKNGSPEIKLKITKTYMNGKPLFESSICGDSAADVSQSEENGQKPENKARRNRK 170
Query: 199 KSNKHDSSRSEERKSHKIPKLEPEEQNRPNERVDTVSEKPREEPVLKEEAPVQPILSSVP 258
+S K+DS + + ++ + S+K + P KE P
Sbjct: 171 RSIKYDSLLEQGLVEAALVS-----------KISSPSDK--KIPAKKESCP--------- 208
Query: 259 TTEVSTG------VKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKIN--TRGAREYHV 310
+TG +K+ VGDLVWSKV YPWWPCMVS+DP L +TK+ + AR+YHV
Sbjct: 209 ----NTGRDKDHLLKYNVGDLVWSKVSGYPWWPCMVSADPLLHSYTKLKGQKKSARQYHV 264
Query: 311 QFFSNQPERAWVHEKRVREYKGHKQYEELLAEATKQASNHSEKQKIRKPRPQRERAQWDI 370
QFF + PERAW+ EK + ++G Q+E+L E+ KQA +EK K+ KP + RAQW++
Sbjct: 265 QFFGDAPERAWIFEKSLVAFEGEGQFEKLCQESAKQAPTKAEKIKLLKPISGKLRAQWEM 324
Query: 371 GIAHAEKALKMTREERIEQYTFIYIDKQPEEALSQAKKSVASKTEVKKTRRPRSVLNTQP 430
GI AE+A M+ EER ++TF+Y+ Q AK++ + + + V
Sbjct: 325 GIVQAEEAASMSVEERKAKFTFLYVGDQLHLNPQVAKEAGIAAESLGEMAESSGVSEEAA 384
Query: 431 EQTNAGEVASSLSSTEIRRHSQRRHTSAEEEEPPPV--KIAWKTAAA--RKSLPASITMH 486
E N V + RR ++ ++ E P + KTA A R+ + +
Sbjct: 385 E--NPKSVREECIPMKRRRRAKLCSSAETLESHPDIGKSTPQKTAEADPRRGVGSPPGRK 442
Query: 487 KGSLDLQKCNMSPVVKIEQVFALQNATGDGKFIDQFVYS-TKGIGNKTEISVRGQDRLII 545
K ++ + + VF K D+ V G + E +R Q L+
Sbjct: 443 KTTVSMPRSRKGDAASQFLVFC-------QKHRDEVVAEHPDASGEEIEELLRSQWSLL- 494
Query: 546 STPNQRNEKPTQ-SVSSPEATSGSTGSVEKKQQRRSIRTRSESEKS-TEVVPKKKIKKE- 602
+ QR T+ ++ +P +G+V K++ + R + +E + E P+K+++ +
Sbjct: 495 -SEKQRARYNTKFALVAPVQAEEDSGNVNGKKRNHTKRIQDPTEDAEAEDTPRKRLRTDK 553
Query: 603 ----QVETVPQATVKTGLQK 618
+ +T+ T +T K
Sbjct: 554 HSLRKRDTITDKTARTSSYK 573
>gi|19913358 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
[Homo sapiens]
Length = 1365
Score = 202 bits (514), Expect = 8e-52
Identities = 155/500 (31%), Positives = 241/500 (48%), Gaps = 58/500 (11%)
Query: 140 PQTVIPKKTGSPEIKLKITKTIQNGRELFESSLCGDLLNEVQASEHTKSKHESR-KEKRK 198
P P K GSPEIKLKITKT NG+ LFESS+CGD +V SE K E++ + RK
Sbjct: 111 PPNTTPIKNGSPEIKLKITKTYMNGKPLFESSICGDSAADVSQSEENGQKPENKARRNRK 170
Query: 199 KSNKHDSSRSEERKSHKIPKLEPEEQNRPNERVDTVSEKPREEPVLKEEAPVQPILSSVP 258
+S K+DS + + ++ + S+K + P KE P
Sbjct: 171 RSIKYDSLLEQGLVEAALVS-----------KISSPSDK--KIPAKKESCP--------- 208
Query: 259 TTEVSTG------VKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKIN--TRGAREYHV 310
+TG +K+ VGDLVWSKV YPWWPCMVS+DP L +TK+ + AR+YHV
Sbjct: 209 ----NTGRDKDHLLKYNVGDLVWSKVSGYPWWPCMVSADPLLHSYTKLKGQKKSARQYHV 264
Query: 311 QFFSNQPERAWVHEKRVREYKGHKQYEELLAEATKQASNHSEKQKIRKPRPQRERAQWDI 370
QFF + PERAW+ EK + ++G Q+E+L E+ KQA +EK K+ KP + RAQW++
Sbjct: 265 QFFGDAPERAWIFEKSLVAFEGEGQFEKLCQESAKQAPTKAEKIKLLKPISGKLRAQWEM 324
Query: 371 GIAHAEKALKMTREERIEQYTFIYIDKQPEEALSQAKKSVASKTEVKKTRRPRSVLNTQP 430
GI AE+A M+ EER ++TF+Y+ Q AK++ + + + V
Sbjct: 325 GIVQAEEAASMSVEERKAKFTFLYVGDQLHLNPQVAKEAGIAAESLGEMAESSGVSEEAA 384
Query: 431 EQTNAGEVASSLSSTEIRRHSQRRHTSAEEEEPPPV--KIAWKTAAA--RKSLPASITMH 486
E N V + RR ++ ++ E P + KTA A R+ + +
Sbjct: 385 E--NPKSVREECIPMKRRRRAKLCSSAETLESHPDIGKSTPQKTAEADPRRGVGSPPGRK 442
Query: 487 KGSLDLQKCNMSPVVKIEQVFALQNATGDGKFIDQFVYS-TKGIGNKTEISVRGQDRLII 545
K ++ + + VF K D+ V G + E +R Q L+
Sbjct: 443 KTTVSMPRSRKGDAASQFLVFC-------QKHRDEVVAEHPDASGEEIEELLRSQWSLL- 494
Query: 546 STPNQRNEKPTQ-SVSSPEATSGSTGSVEKKQQRRSIRTRSESEKS-TEVVPKKKIKKE- 602
+ QR T+ ++ +P +G+V K++ + R + +E + E P+K+++ +
Sbjct: 495 -SEKQRARYNTKFALVAPVQAEEDSGNVNGKKRNHTKRIQDPTEDAEAEDTPRKRLRTDK 553
Query: 603 ----QVETVPQATVKTGLQK 618
+ +T+ T +T K
Sbjct: 554 HSLRKRDTITDKTARTSSYK 573
Score = 42.0 bits (97), Expect = 0.002
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 265 GVKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKINTRGAREYHVQFFSNQPERAWVHE 324
G K D++W K+G Y WWP V + + + E+ V FF ++ + W H+
Sbjct: 875 GKKLHFQDIIWVKLGNYRWWPAEVCHPKNVPPNIQKMKHEIGEFPVFFFGSK-DYYWTHQ 933
Query: 325 KRVREY 330
RV Y
Sbjct: 934 ARVFPY 939
>gi|6594683 Wolf-Hirschhorn syndrome candidate 1 protein isoform 4
[Homo sapiens]
Length = 629
Score = 202 bits (514), Expect = 8e-52
Identities = 155/500 (31%), Positives = 241/500 (48%), Gaps = 58/500 (11%)
Query: 140 PQTVIPKKTGSPEIKLKITKTIQNGRELFESSLCGDLLNEVQASEHTKSKHESR-KEKRK 198
P P K GSPEIKLKITKT NG+ LFESS+CGD +V SE K E++ + RK
Sbjct: 111 PPNTTPIKNGSPEIKLKITKTYMNGKPLFESSICGDSAADVSQSEENGQKPENKARRNRK 170
Query: 199 KSNKHDSSRSEERKSHKIPKLEPEEQNRPNERVDTVSEKPREEPVLKEEAPVQPILSSVP 258
+S K+DS + + ++ + S+K + P KE P
Sbjct: 171 RSIKYDSLLEQGLVEAALVS-----------KISSPSDK--KIPAKKESCP--------- 208
Query: 259 TTEVSTG------VKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKIN--TRGAREYHV 310
+TG +K+ VGDLVWSKV YPWWPCMVS+DP L +TK+ + AR+YHV
Sbjct: 209 ----NTGRDKDHLLKYNVGDLVWSKVSGYPWWPCMVSADPLLHSYTKLKGQKKSARQYHV 264
Query: 311 QFFSNQPERAWVHEKRVREYKGHKQYEELLAEATKQASNHSEKQKIRKPRPQRERAQWDI 370
QFF + PERAW+ EK + ++G Q+E+L E+ KQA +EK K+ KP + RAQW++
Sbjct: 265 QFFGDAPERAWIFEKSLVAFEGEGQFEKLCQESAKQAPTKAEKIKLLKPISGKLRAQWEM 324
Query: 371 GIAHAEKALKMTREERIEQYTFIYIDKQPEEALSQAKKSVASKTEVKKTRRPRSVLNTQP 430
GI AE+A M+ EER ++TF+Y+ Q AK++ + + + V
Sbjct: 325 GIVQAEEAASMSVEERKAKFTFLYVGDQLHLNPQVAKEAGIAAESLGEMAESSGVSEEAA 384
Query: 431 EQTNAGEVASSLSSTEIRRHSQRRHTSAEEEEPPPV--KIAWKTAAA--RKSLPASITMH 486
E N V + RR ++ ++ E P + KTA A R+ + +
Sbjct: 385 E--NPKSVREECIPMKRRRRAKLCSSAETLESHPDIGKSTPQKTAEADPRRGVGSPPGRK 442
Query: 487 KGSLDLQKCNMSPVVKIEQVFALQNATGDGKFIDQFVYS-TKGIGNKTEISVRGQDRLII 545
K ++ + + VF K D+ V G + E +R Q L+
Sbjct: 443 KTTVSMPRSRKGDAASQFLVFC-------QKHRDEVVAEHPDASGEEIEELLRSQWSLL- 494
Query: 546 STPNQRNEKPTQ-SVSSPEATSGSTGSVEKKQQRRSIRTRSESEKS-TEVVPKKKIKKE- 602
+ QR T+ ++ +P +G+V K++ + R + +E + E P+K+++ +
Sbjct: 495 -SEKQRARYNTKFALVAPVQAEEDSGNVNGKKRNHTKRIQDPTEDAEAEDTPRKRLRTDK 553
Query: 603 ----QVETVPQATVKTGLQK 618
+ +T+ T +T K
Sbjct: 554 HSLRKRDTITDKTARTSSYK 573
>gi|19913350 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
[Homo sapiens]
Length = 1365
Score = 202 bits (514), Expect = 8e-52
Identities = 155/500 (31%), Positives = 241/500 (48%), Gaps = 58/500 (11%)
Query: 140 PQTVIPKKTGSPEIKLKITKTIQNGRELFESSLCGDLLNEVQASEHTKSKHESR-KEKRK 198
P P K GSPEIKLKITKT NG+ LFESS+CGD +V SE K E++ + RK
Sbjct: 111 PPNTTPIKNGSPEIKLKITKTYMNGKPLFESSICGDSAADVSQSEENGQKPENKARRNRK 170
Query: 199 KSNKHDSSRSEERKSHKIPKLEPEEQNRPNERVDTVSEKPREEPVLKEEAPVQPILSSVP 258
+S K+DS + + ++ + S+K + P KE P
Sbjct: 171 RSIKYDSLLEQGLVEAALVS-----------KISSPSDK--KIPAKKESCP--------- 208
Query: 259 TTEVSTG------VKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKIN--TRGAREYHV 310
+TG +K+ VGDLVWSKV YPWWPCMVS+DP L +TK+ + AR+YHV
Sbjct: 209 ----NTGRDKDHLLKYNVGDLVWSKVSGYPWWPCMVSADPLLHSYTKLKGQKKSARQYHV 264
Query: 311 QFFSNQPERAWVHEKRVREYKGHKQYEELLAEATKQASNHSEKQKIRKPRPQRERAQWDI 370
QFF + PERAW+ EK + ++G Q+E+L E+ KQA +EK K+ KP + RAQW++
Sbjct: 265 QFFGDAPERAWIFEKSLVAFEGEGQFEKLCQESAKQAPTKAEKIKLLKPISGKLRAQWEM 324
Query: 371 GIAHAEKALKMTREERIEQYTFIYIDKQPEEALSQAKKSVASKTEVKKTRRPRSVLNTQP 430
GI AE+A M+ EER ++TF+Y+ Q AK++ + + + V
Sbjct: 325 GIVQAEEAASMSVEERKAKFTFLYVGDQLHLNPQVAKEAGIAAESLGEMAESSGVSEEAA 384
Query: 431 EQTNAGEVASSLSSTEIRRHSQRRHTSAEEEEPPPV--KIAWKTAAA--RKSLPASITMH 486
E N V + RR ++ ++ E P + KTA A R+ + +
Sbjct: 385 E--NPKSVREECIPMKRRRRAKLCSSAETLESHPDIGKSTPQKTAEADPRRGVGSPPGRK 442
Query: 487 KGSLDLQKCNMSPVVKIEQVFALQNATGDGKFIDQFVYS-TKGIGNKTEISVRGQDRLII 545
K ++ + + VF K D+ V G + E +R Q L+
Sbjct: 443 KTTVSMPRSRKGDAASQFLVFC-------QKHRDEVVAEHPDASGEEIEELLRSQWSLL- 494
Query: 546 STPNQRNEKPTQ-SVSSPEATSGSTGSVEKKQQRRSIRTRSESEKS-TEVVPKKKIKKE- 602
+ QR T+ ++ +P +G+V K++ + R + +E + E P+K+++ +
Sbjct: 495 -SEKQRARYNTKFALVAPVQAEEDSGNVNGKKRNHTKRIQDPTEDAEAEDTPRKRLRTDK 553
Query: 603 ----QVETVPQATVKTGLQK 618
+ +T+ T +T K
Sbjct: 554 HSLRKRDTITDKTARTSSYK 573
Score = 42.0 bits (97), Expect = 0.002
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 265 GVKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKINTRGAREYHVQFFSNQPERAWVHE 324
G K D++W K+G Y WWP V + + + E+ V FF ++ + W H+
Sbjct: 875 GKKLHFQDIIWVKLGNYRWWPAEVCHPKNVPPNIQKMKHEIGEFPVFFFGSK-DYYWTHQ 933
Query: 325 KRVREY 330
RV Y
Sbjct: 934 ARVFPY 939
>gi|19913348 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
[Homo sapiens]
Length = 1365
Score = 202 bits (514), Expect = 8e-52
Identities = 155/500 (31%), Positives = 241/500 (48%), Gaps = 58/500 (11%)
Query: 140 PQTVIPKKTGSPEIKLKITKTIQNGRELFESSLCGDLLNEVQASEHTKSKHESR-KEKRK 198
P P K GSPEIKLKITKT NG+ LFESS+CGD +V SE K E++ + RK
Sbjct: 111 PPNTTPIKNGSPEIKLKITKTYMNGKPLFESSICGDSAADVSQSEENGQKPENKARRNRK 170
Query: 199 KSNKHDSSRSEERKSHKIPKLEPEEQNRPNERVDTVSEKPREEPVLKEEAPVQPILSSVP 258
+S K+DS + + ++ + S+K + P KE P
Sbjct: 171 RSIKYDSLLEQGLVEAALVS-----------KISSPSDK--KIPAKKESCP--------- 208
Query: 259 TTEVSTG------VKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKIN--TRGAREYHV 310
+TG +K+ VGDLVWSKV YPWWPCMVS+DP L +TK+ + AR+YHV
Sbjct: 209 ----NTGRDKDHLLKYNVGDLVWSKVSGYPWWPCMVSADPLLHSYTKLKGQKKSARQYHV 264
Query: 311 QFFSNQPERAWVHEKRVREYKGHKQYEELLAEATKQASNHSEKQKIRKPRPQRERAQWDI 370
QFF + PERAW+ EK + ++G Q+E+L E+ KQA +EK K+ KP + RAQW++
Sbjct: 265 QFFGDAPERAWIFEKSLVAFEGEGQFEKLCQESAKQAPTKAEKIKLLKPISGKLRAQWEM 324
Query: 371 GIAHAEKALKMTREERIEQYTFIYIDKQPEEALSQAKKSVASKTEVKKTRRPRSVLNTQP 430
GI AE+A M+ EER ++TF+Y+ Q AK++ + + + V
Sbjct: 325 GIVQAEEAASMSVEERKAKFTFLYVGDQLHLNPQVAKEAGIAAESLGEMAESSGVSEEAA 384
Query: 431 EQTNAGEVASSLSSTEIRRHSQRRHTSAEEEEPPPV--KIAWKTAAA--RKSLPASITMH 486
E N V + RR ++ ++ E P + KTA A R+ + +
Sbjct: 385 E--NPKSVREECIPMKRRRRAKLCSSAETLESHPDIGKSTPQKTAEADPRRGVGSPPGRK 442
Query: 487 KGSLDLQKCNMSPVVKIEQVFALQNATGDGKFIDQFVYS-TKGIGNKTEISVRGQDRLII 545
K ++ + + VF K D+ V G + E +R Q L+
Sbjct: 443 KTTVSMPRSRKGDAASQFLVFC-------QKHRDEVVAEHPDASGEEIEELLRSQWSLL- 494
Query: 546 STPNQRNEKPTQ-SVSSPEATSGSTGSVEKKQQRRSIRTRSESEKS-TEVVPKKKIKKE- 602
+ QR T+ ++ +P +G+V K++ + R + +E + E P+K+++ +
Sbjct: 495 -SEKQRARYNTKFALVAPVQAEEDSGNVNGKKRNHTKRIQDPTEDAEAEDTPRKRLRTDK 553
Query: 603 ----QVETVPQATVKTGLQK 618
+ +T+ T +T K
Sbjct: 554 HSLRKRDTITDKTARTSSYK 573
Score = 42.0 bits (97), Expect = 0.002
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 265 GVKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKINTRGAREYHVQFFSNQPERAWVHE 324
G K D++W K+G Y WWP V + + + E+ V FF ++ + W H+
Sbjct: 875 GKKLHFQDIIWVKLGNYRWWPAEVCHPKNVPPNIQKMKHEIGEFPVFFFGSK-DYYWTHQ 933
Query: 325 KRVREY 330
RV Y
Sbjct: 934 ARVFPY 939
>gi|109633019 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
[Homo sapiens]
Length = 1365
Score = 202 bits (514), Expect = 8e-52
Identities = 155/500 (31%), Positives = 241/500 (48%), Gaps = 58/500 (11%)
Query: 140 PQTVIPKKTGSPEIKLKITKTIQNGRELFESSLCGDLLNEVQASEHTKSKHESR-KEKRK 198
P P K GSPEIKLKITKT NG+ LFESS+CGD +V SE K E++ + RK
Sbjct: 111 PPNTTPIKNGSPEIKLKITKTYMNGKPLFESSICGDSAADVSQSEENGQKPENKARRNRK 170
Query: 199 KSNKHDSSRSEERKSHKIPKLEPEEQNRPNERVDTVSEKPREEPVLKEEAPVQPILSSVP 258
+S K+DS + + ++ + S+K + P KE P
Sbjct: 171 RSIKYDSLLEQGLVEAALVS-----------KISSPSDK--KIPAKKESCP--------- 208
Query: 259 TTEVSTG------VKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKIN--TRGAREYHV 310
+TG +K+ VGDLVWSKV YPWWPCMVS+DP L +TK+ + AR+YHV
Sbjct: 209 ----NTGRDKDHLLKYNVGDLVWSKVSGYPWWPCMVSADPLLHSYTKLKGQKKSARQYHV 264
Query: 311 QFFSNQPERAWVHEKRVREYKGHKQYEELLAEATKQASNHSEKQKIRKPRPQRERAQWDI 370
QFF + PERAW+ EK + ++G Q+E+L E+ KQA +EK K+ KP + RAQW++
Sbjct: 265 QFFGDAPERAWIFEKSLVAFEGEGQFEKLCQESAKQAPTKAEKIKLLKPISGKLRAQWEM 324
Query: 371 GIAHAEKALKMTREERIEQYTFIYIDKQPEEALSQAKKSVASKTEVKKTRRPRSVLNTQP 430
GI AE+A M+ EER ++TF+Y+ Q AK++ + + + V
Sbjct: 325 GIVQAEEAASMSVEERKAKFTFLYVGDQLHLNPQVAKEAGIAAESLGEMAESSGVSEEAA 384
Query: 431 EQTNAGEVASSLSSTEIRRHSQRRHTSAEEEEPPPV--KIAWKTAAA--RKSLPASITMH 486
E N V + RR ++ ++ E P + KTA A R+ + +
Sbjct: 385 E--NPKSVREECIPMKRRRRAKLCSSAETLESHPDIGKSTPQKTAEADPRRGVGSPPGRK 442
Query: 487 KGSLDLQKCNMSPVVKIEQVFALQNATGDGKFIDQFVYS-TKGIGNKTEISVRGQDRLII 545
K ++ + + VF K D+ V G + E +R Q L+
Sbjct: 443 KTTVSMPRSRKGDAASQFLVFC-------QKHRDEVVAEHPDASGEEIEELLRSQWSLL- 494
Query: 546 STPNQRNEKPTQ-SVSSPEATSGSTGSVEKKQQRRSIRTRSESEKS-TEVVPKKKIKKE- 602
+ QR T+ ++ +P +G+V K++ + R + +E + E P+K+++ +
Sbjct: 495 -SEKQRARYNTKFALVAPVQAEEDSGNVNGKKRNHTKRIQDPTEDAEAEDTPRKRLRTDK 553
Query: 603 ----QVETVPQATVKTGLQK 618
+ +T+ T +T K
Sbjct: 554 HSLRKRDTITDKTARTSSYK 573
Score = 42.0 bits (97), Expect = 0.002
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 265 GVKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKINTRGAREYHVQFFSNQPERAWVHE 324
G K D++W K+G Y WWP V + + + E+ V FF ++ + W H+
Sbjct: 875 GKKLHFQDIIWVKLGNYRWWPAEVCHPKNVPPNIQKMKHEIGEFPVFFFGSK-DYYWTHQ 933
Query: 325 KRVREY 330
RV Y
Sbjct: 934 ARVFPY 939
>gi|19923586 nuclear receptor binding SET domain protein 1 isoform b
[Homo sapiens]
Length = 2696
Score = 98.2 bits (243), Expect = 2e-20
Identities = 85/317 (26%), Positives = 134/317 (42%), Gaps = 76/317 (23%)
Query: 133 PPPPPSVPQTVIPKKTGSPEIKLKITKTIQNGRELFESSLCGD----------------- 175
P P ++ P SPE+++K+TKTI+NG FE+ C D
Sbjct: 118 PGGPTALAMKQEPSCNNSPELQVKVTKTIKNGFLHFENFTCVDDADVDSEMDPEQPVTED 177
Query: 176 -----LLNEVQASE----HTKSKHESRKEKRKKSNKHDSSRSEERKSHKIPKLEPE---E 223
+ E Q + TKS++ + + + SR KS +P L P+ +
Sbjct: 178 ESIEEIFEETQTNATCNYETKSENGVKVAMGSEQDSTPESRHGAVKSPFLP-LAPQTETQ 236
Query: 224 QNRPNERVDTVSEKPR---------------EEPVLKEEAPVQ----------------P 252
+N+ VD +EK EE + Q P
Sbjct: 237 KNKQRNEVDGSNEKAALLPAPFSLGDTNITIEEQLNSINLSFQDDPDSSTSTLGNMLELP 296
Query: 253 ILSSVPTTEV---------STGVKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKI--- 300
SS T++ ST +K++VGDL+W+K PWWPC + SDP + H+K+
Sbjct: 297 GTSSSSTSQELPFCQPKKKSTPLKYEVGDLIWAKFKRRPWWPCRICSDPLINTHSKMKVS 356
Query: 301 NTRGAREYHVQFFSNQPERAWVHEKRVREYKGHKQYEELLAEATKQASNHSEKQKIRKPR 360
N R R+Y+V+ F + ERAWV K + ++G Q+EEL ++ EK R
Sbjct: 357 NRRPYRQYYVEAFGDPSERAWVAGKAIVMFEGRHQFEEL--PVLRRRGKQKEK-GYRHKV 413
Query: 361 PQRERAQWDIGIAHAEK 377
PQ+ ++W+ + AE+
Sbjct: 414 PQKILSKWEASVGLAEQ 430
Score = 40.0 bits (92), Expect = 0.007
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 10/107 (9%)
Query: 261 EVSTGVKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKINTRGAREYHVQFFSNQPERA 320
+ G K ++VW KVG Y WWP + + + E+ V FF + +
Sbjct: 1747 DCKAGKKPHYREIVWVKVGRYRWWPAEICHPRAVPSNIDKMRHDVGEFPVLFFGSN-DYL 1805
Query: 321 WVHEKRVREY---------KGHKQYEELLAEATKQASNHSEKQKIRK 358
W H+ RV Y K K + +A ++A+ E+ K +K
Sbjct: 1806 WTHQARVFPYMEGDVSSKDKMGKGVDGTYKKALQEAAARFEELKAQK 1852
>gi|27477095 nuclear receptor binding SET domain protein 1 isoform a
[Homo sapiens]
Length = 2427
Score = 89.4 bits (220), Expect = 1e-17
Identities = 44/118 (37%), Positives = 69/118 (58%), Gaps = 6/118 (5%)
Query: 263 STGVKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKI---NTRGAREYHVQFFSNQPER 319
ST +K++VGDL+W+K PWWPC + SDP + H+K+ N R R+Y+V+ F + ER
Sbjct: 47 STPLKYEVGDLIWAKFKRRPWWPCRICSDPLINTHSKMKVSNRRPYRQYYVEAFGDPSER 106
Query: 320 AWVHEKRVREYKGHKQYEELLAEATKQASNHSEKQKIRKPRPQRERAQWDIGIAHAEK 377
AWV K + ++G Q+EEL ++ EK R PQ+ ++W+ + AE+
Sbjct: 107 AWVAGKAIVMFEGRHQFEEL--PVLRRRGKQKEK-GYRHKVPQKILSKWEASVGLAEQ 161
Score = 40.0 bits (92), Expect = 0.007
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 10/107 (9%)
Query: 261 EVSTGVKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKINTRGAREYHVQFFSNQPERA 320
+ G K ++VW KVG Y WWP + + + E+ V FF + +
Sbjct: 1478 DCKAGKKPHYREIVWVKVGRYRWWPAEICHPRAVPSNIDKMRHDVGEFPVLFFGSN-DYL 1536
Query: 321 WVHEKRVREY---------KGHKQYEELLAEATKQASNHSEKQKIRK 358
W H+ RV Y K K + +A ++A+ E+ K +K
Sbjct: 1537 WTHQARVFPYMEGDVSSKDKMGKGVDGTYKKALQEAAARFEELKAQK 1583
>gi|4504191 mutS homolog 6 [Homo sapiens]
Length = 1360
Score = 75.9 bits (185), Expect = 1e-13
Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
Query: 264 TGVKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKINTRGAREYHVQFFSNQPERAWVH 323
T F GDLVW+K+ YPWWPC+V + P + + R HVQFF + P R WV
Sbjct: 86 TSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFIREKGKSVR-VHVQFFDDSPTRGWVS 144
Query: 324 EKRVREYKGHKQYEELLAEATKQASNHSEKQKIRKPRPQRERAQWDIGIAHAEKAL---- 379
++ ++ Y G K EA K +S K +I + + + A I E A+
Sbjct: 145 KRLLKPYTGSKS-----KEAQKGGHFYSAKPEILRAMQRADEALNKDKIKRLELAVCDEP 199
Query: 380 -KMTREERIEQYTFIYIDKQPEEALSQAKKSVASKTE 415
+ EE +E T DK E+ ++++ V KT+
Sbjct: 200 SEPEEEEEMEVGTTYVTDKSEEDNEIESEEEVQPKTQ 236
>gi|94721344 zinc finger, CW type with PWWP domain 1 [Homo sapiens]
Length = 648
Score = 52.8 bits (125), Expect = 1e-06
Identities = 55/229 (24%), Positives = 92/229 (40%), Gaps = 38/229 (16%)
Query: 184 EHTKSKHESRKEKRKKSNKHDSSRSEERKSHKIPK-------LEPEEQNRPNERVDTVSE 236
E T+ HE R+E R K D S+ +++ +I ++ N R +
Sbjct: 215 EKTQGGHEHRQEDRLKKTVQDHSQIRDQQKGEISGFGQCLVWVQCSFPNCGKWRRLCGNI 274
Query: 237 KPREEP---VLKEEAPVQPILSSVPTTEVSTGVKFQV-------GDLVWSKVGTYPWWPC 286
P P + VQ +P E TG++ V G ++W+K YPWWP
Sbjct: 275 DPSVLPDNWSCDQNTDVQYNRCDIPE-ETWTGLESDVAYASYIPGSIIWAKQYGYPWWPG 333
Query: 287 MVSSDPQLE---VHTKINTRGAREYHVQFFSNQPERAWVHEKRVREYKGHKQYEELLAEA 343
M+ SDP L + T +YHV FF RAW+ + K ++EL E
Sbjct: 334 MIESDPDLGEYFLFTSHLDSLPSKYHVTFFGETVSRAWIPVNML------KNFQELSLEL 387
Query: 344 TKQASNHSEKQKIRKPRPQRERAQWDIGIAHAEKALKMTREERIEQYTF 392
+ + K R + + + A++A +++ +ER+ + F
Sbjct: 388 S-----------VMKKRRNDCSQKLGVALMMAQEAEQISIQERVNLFGF 425
>gi|40556376 cytokine-like nuclear factor n-pac [Homo sapiens]
Length = 553
Score = 50.8 bits (120), Expect = 4e-06
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 24/125 (19%)
Query: 266 VKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKINTRGAREYHVQFFSNQPERAWVHEK 325
V ++GDLVW K+G YP WP + + P+ RG + + V+FF + + AW+ +
Sbjct: 4 VSLRLGDLVWGKLGRYPPWPGKIVNPPK----DLKKPRGKKCFFVKFFGTE-DHAWIKVE 58
Query: 326 RVREYKGHKQ-----------------YEELL--AEATKQASNHSEKQKIRKPRPQRERA 366
+++ Y HK+ EE L A+ Q S+H+ + ER+
Sbjct: 59 QLKPYHAHKEEMIKINKGKRFQQAVDAVEEFLRRAKGKDQTSSHNSSDDKNRRNSSEERS 118
Query: 367 QWDIG 371
+ + G
Sbjct: 119 RPNSG 123
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 50.1 bits (118), Expect = 6e-06
Identities = 84/390 (21%), Positives = 140/390 (35%), Gaps = 78/390 (20%)
Query: 107 SPTDYYHSEIPNTRPHEILEKPSPPQPPPPPSVPQTVIPKKTGSPEIKLKITKTIQNGRE 166
SP P+T H +P+ P P P P +P K SP K +E
Sbjct: 460 SPKSKARPSSPSTSWH----RPASPCPSPGPG---HTLPPKPPSPRGTTASPKGRVRRKE 512
Query: 167 LFESSLCGDLLNEVQASEHTKSKHESRKEKRKKSNKHDSSRSEERKSHKIPKLEPEEQNR 226
E + S + + KR+ SN+ +S+ + P P
Sbjct: 513 ------------EAKESPSAAGPEDKSQSKRRASNEKESAAP----ASPAPSPAPSPTPA 556
Query: 227 PNERVDTVSEKPREEPVLKEE-APVQPILSSVPTTEVSTGVKFQVGDLVWSKVGTYPWWP 285
P ++ +E P + VL AP P+ S P +
Sbjct: 557 PPQKEQPPAETPTDAAVLTSPPAPAPPVTPSKPMAGTTDR-------------------- 596
Query: 286 CMVSSDPQLEVHTKINTRGAREYHVQFFSNQPERAWVHEKRVREYKGHKQYEELLAEATK 345
+L + R RE Q Q ER +KR+RE + ++ E A A +
Sbjct: 597 ---EEATRLLAEKRRQAREQREREEQERRLQAER----DKRMREEQLAREAE---ARAER 646
Query: 346 QASNHSEKQKIRKPRPQRERAQWDIGIAHAEKALKMTREE----RIEQYTFIYIDKQP-- 399
+A +++ + + Q E+ + + E+A +REE R+E+ +Q
Sbjct: 647 EAEARRREEQEAREKAQAEQEEQERLQKQKEEAEARSREEAERQRLEREKHFQQQEQERQ 706
Query: 400 ------EEALSQAKKSVASKTEVKKTRRPRSVLNTQPEQTNAGEVASSLSSTEIRRHSQR 453
EE + + +KS S+T+ K+ + + + PE A E S E
Sbjct: 707 ERRKRLEEIMKRTRKSEVSETKQKQDSKEANANGSSPEPVKAVEARSPGLQKE------- 759
Query: 454 RHTSAEEEEPPPVKIAWKTAAARKSLPASI 483
+ ++EEP P + W + K LPAS+
Sbjct: 760 ---AVQKEEPIPQEPQWSLPS--KELPASL 784
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 48.9 bits (115), Expect = 1e-05
Identities = 60/250 (24%), Positives = 91/250 (36%), Gaps = 21/250 (8%)
Query: 18 QPPQLIDSANIRQEDAFDNNSDIAEDGGQTPYEATLQQGFQYPATTEDLPPLTNGYPSSI 77
QPP L S N+ A + + + Q P+ Q+P PP+T P +
Sbjct: 449 QPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFA-------QHPFVPGGPPPIT---PPTC 498
Query: 78 SVYETQTKYQSYNQYP--NGSANGFGAVRNFSPTDYYHSEIPNTRPHEILEKPSPPQPPP 135
T + P +G+A G++ S +I + E SPP PP
Sbjct: 499 PSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPR 558
Query: 136 PPSVPQTVIPKKTGSPEIKLKITKTIQNGRELFESSLCGDLLNEVQASEHTKSKHESRKE 195
PS TV+ + + + + K + G + S DL A K E E
Sbjct: 559 SPSPEPTVVDTPSHASQ-SARFYKHLDRG---YNSCARTDLYFMPLAGSKLAKKREEAIE 614
Query: 196 KRKKSNKHDSSRSEERKSHKIPKLEPE-EQNRPNERVDTVSEKPRE----EPVLKEEAPV 250
K K+ + + ER+ K + E E E+ R ER S E +P L +
Sbjct: 615 KAKREAEQKAREEREREKEKEKEREREREREREAERAAKASSSAHEGRLSDPQLSGPGHM 674
Query: 251 QPILSSVPTT 260
+P PTT
Sbjct: 675 RPSFEPPPTT 684
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 48.9 bits (115), Expect = 1e-05
Identities = 60/250 (24%), Positives = 91/250 (36%), Gaps = 21/250 (8%)
Query: 18 QPPQLIDSANIRQEDAFDNNSDIAEDGGQTPYEATLQQGFQYPATTEDLPPLTNGYPSSI 77
QPP L S N+ A + + + Q P+ Q+P PP+T P +
Sbjct: 1003 QPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFA-------QHPFVPGGPPPIT---PPTC 1052
Query: 78 SVYETQTKYQSYNQYP--NGSANGFGAVRNFSPTDYYHSEIPNTRPHEILEKPSPPQPPP 135
T + P +G+A G++ S +I + E SPP PP
Sbjct: 1053 PSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPR 1112
Query: 136 PPSVPQTVIPKKTGSPEIKLKITKTIQNGRELFESSLCGDLLNEVQASEHTKSKHESRKE 195
PS TV+ + + + + K + G + S DL A K E E
Sbjct: 1113 SPSPEPTVVDTPSHASQ-SARFYKHLDRG---YNSCARTDLYFMPLAGSKLAKKREEAIE 1168
Query: 196 KRKKSNKHDSSRSEERKSHKIPKLEPE-EQNRPNERVDTVSEKPRE----EPVLKEEAPV 250
K K+ + + ER+ K + E E E+ R ER S E +P L +
Sbjct: 1169 KAKREAEQKAREEREREKEKEKEREREREREREAERAAKASSSAHEGRLSDPQLSGPGHM 1228
Query: 251 QPILSSVPTT 260
+P PTT
Sbjct: 1229 RPSFEPPPTT 1238
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 48.9 bits (115), Expect = 1e-05
Identities = 60/250 (24%), Positives = 91/250 (36%), Gaps = 21/250 (8%)
Query: 18 QPPQLIDSANIRQEDAFDNNSDIAEDGGQTPYEATLQQGFQYPATTEDLPPLTNGYPSSI 77
QPP L S N+ A + + + Q P+ Q+P PP+T P +
Sbjct: 1003 QPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFA-------QHPFVPGGPPPIT---PPTC 1052
Query: 78 SVYETQTKYQSYNQYP--NGSANGFGAVRNFSPTDYYHSEIPNTRPHEILEKPSPPQPPP 135
T + P +G+A G++ S +I + E SPP PP
Sbjct: 1053 PSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPR 1112
Query: 136 PPSVPQTVIPKKTGSPEIKLKITKTIQNGRELFESSLCGDLLNEVQASEHTKSKHESRKE 195
PS TV+ + + + + K + G + S DL A K E E
Sbjct: 1113 SPSPEPTVVDTPSHASQ-SARFYKHLDRG---YNSCARTDLYFMPLAGSKLAKKREEAIE 1168
Query: 196 KRKKSNKHDSSRSEERKSHKIPKLEPE-EQNRPNERVDTVSEKPRE----EPVLKEEAPV 250
K K+ + + ER+ K + E E E+ R ER S E +P L +
Sbjct: 1169 KAKREAEQKAREEREREKEKEKEREREREREREAERAAKASSSAHEGRLSDPQLSGPGHM 1228
Query: 251 QPILSSVPTT 260
+P PTT
Sbjct: 1229 RPSFEPPPTT 1238
>gi|115387118 hypothetical protein LOC57562 [Homo sapiens]
Length = 1117
Score = 47.0 bits (110), Expect = 5e-05
Identities = 36/137 (26%), Positives = 69/137 (50%), Gaps = 6/137 (4%)
Query: 299 KINTRGAREYHVQFFSNQPERAWVHEKRVREYKGHKQYEELLAEATKQASNHSEK-QKIR 357
KI AR+Y V+ SN+ ++A+ +++ +E K H+ E++L + ++ +EK Q+
Sbjct: 65 KICRNRARKYFVE--SNRRKKAFEEKRKEQEEKEHQIREQILQQRKQKFEEVTEKFQRAH 122
Query: 358 KPRPQRERAQWDIGIAHAEKALKMTREERIEQYTFIYIDKQPE---EALSQAKKSVASKT 414
P QR +A + E+ALK +E ++ + ++P A+ A S SK
Sbjct: 123 VPLSQRRKAVSRKPVPPLEEALKQIQESNLKSEVNLPFSRRPTINWRAIDSALPSALSKN 182
Query: 415 EVKKTRRPRSVLNTQPE 431
+ K ++ S +N + E
Sbjct: 183 DHKHQKQLLSKINCEKE 199
>gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]
Length = 1303
Score = 46.2 bits (108), Expect = 9e-05
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 117 PNTRPHEILEKPSPPQPPPP--PSVPQTVIPKKTGSPEI---KLKITKTIQNGRELFESS 171
P T P E P PP PPPP PS P + +P + +L + ++G EL E
Sbjct: 5 PGTPPPPPSESPPPPSPPPPSTPSPPPCSPDARPATPHLLHHRLPLPDDREDG-ELEEGE 63
Query: 172 LCGDLLNEVQASEHTKSKHESRKEKRKKSNKHDSSRSEERKSHKIPKLEPEEQNRPNER 230
L D E Q + + SRKE K KH S EE+ ++ + +E+ + R
Sbjct: 64 LEDDGAEETQ--DTSGGPERSRKE---KGEKHHSDSDEEKSHRRLKRKRKKEREKEKRR 117
Score = 36.2 bits (82), Expect = 0.096
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 117 PNTRPHEILEKPSPPQPPPPPSVPQTVIP 145
PN RP + P PP PPPPP PQ +P
Sbjct: 532 PNGRPMQGGPPPPPPPPPPPPGPPQMPMP 560
>gi|4758516 hepatoma-derived growth factor isoform a [Homo sapiens]
Length = 240
Score = 45.8 bits (107), Expect = 1e-04
Identities = 62/234 (26%), Positives = 97/234 (41%), Gaps = 39/234 (16%)
Query: 267 KFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKINTRGAREYHVQFFSNQPERAWVHEKR 326
+++ GDLV++K+ YP WP + P+ V + N +Y V FF E A++ K
Sbjct: 9 EYKCGDLVFAKMKGYPHWPARIDEMPEAAVKSTAN-----KYQVFFFGTH-ETAFLGPKD 62
Query: 327 VREYKGHKQ----------YEELLAE----ATKQASNHSEKQK---IRKPRPQRERAQWD 369
+ Y+ K+ + E L E T +AS + QK + +P P+ E A+ D
Sbjct: 63 LFPYEESKEKFGKPNKRKGFSEGLWEIENNPTVKASGYQSSQKKSCVEEPEPEPEAAEGD 122
Query: 370 IGIAHAEKALKMTREERIEQYTFIYIDKQPEEALSQ-AKKSVASKTEVKKTRRPRSVLNT 428
+K K E ++ + ID+ +E + A K A +RP+ N
Sbjct: 123 -----GDK--KGNAEGSSDEEGKLVIDEPAKEKNEKGALKRRAGDLLEDSPKRPKEAENP 175
Query: 429 QPEQTNAG--EVASSL------SSTEIRRHSQRRHTSAEEEEPPPVKIAWKTAA 474
+ E+ A EV L +ST S R EEEE + A K A
Sbjct: 176 EGEEKEAATLEVERPLPMEVEKNSTPSEPGSGRGPPQEEEEEEDEEEEATKEDA 229
>gi|117553580 adaptor-related protein complex 3, delta 1 subunit
isoform 2 [Homo sapiens]
Length = 1153
Score = 45.4 bits (106), Expect = 2e-04
Identities = 21/75 (28%), Positives = 39/75 (52%)
Query: 187 KSKHESRKEKRKKSNKHDSSRSEERKSHKIPKLEPEEQNRPNERVDTVSEKPREEPVLKE 246
KSK +KEK+ K + D + +E++ K PK + ++ + E +K +++P E
Sbjct: 840 KSKKPKKKEKKHKEKERDKEKKKEKEKKKSPKPKKKKHRKEKEERTKGKKKSKKQPPGSE 899
Query: 247 EAPVQPILSSVPTTE 261
EA +P+ + P E
Sbjct: 900 EAAGEPVQNGAPEEE 914
Score = 39.3 bits (90), Expect = 0.011
Identities = 38/188 (20%), Positives = 77/188 (40%), Gaps = 24/188 (12%)
Query: 180 VQASEHTKSKHESRKEKRKKSNKHDSSRSEERKSHKIPKLEPEEQNRPNERVDTVSEKPR 239
V+ E + + + K+KR+K K + + R H E +E P ++VD V+E+
Sbjct: 725 VKLEEERRHRQKLEKDKRRKKRKEKEKKGKRR--HSSLPTESDEDIAPAQQVDIVTEEMP 782
Query: 240 EEPVLKEEAPVQPILSSVPTTEVSTGVKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTK 299
E + +E P ++ D+ K P S ++ H
Sbjct: 783 ENALPSDEDDKDP------------NDPYRALDIDLDK-------PLADSEKLPIQKHRN 823
Query: 300 INTRGAREYHVQFFSNQPERAWVHEKRVREYKGHKQYEELLAEATKQASNHSEKQKIRKP 359
T + E V + ++ +K+ +++K ++ +E E K+ S +K+K RK
Sbjct: 824 TETSKSPEKDVPMVEKKSKKP---KKKEKKHKEKERDKEKKKEKEKKKSPKPKKKKHRKE 880
Query: 360 RPQRERAQ 367
+ +R + +
Sbjct: 881 KEERTKGK 888
Score = 33.1 bits (74), Expect = 0.81
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 11/98 (11%)
Query: 135 PPPSVPQTVIPKKTGSPEIKLKITKTIQNGRELFESSLCGDLLNEVQASEHTKSKHESRK 194
P VP ++ KK+ P+ K K K + +E + + ++ + K KH K
Sbjct: 830 PEKDVP--MVEKKSKKPKKKEKKHKEKERDKEKKKEK------EKKKSPKPKKKKHRKEK 881
Query: 195 EKR---KKSNKHDSSRSEERKSHKIPKLEPEEQNRPNE 229
E+R KK +K SEE + PEE+ P E
Sbjct: 882 EERTKGKKKSKKQPPGSEEAAGEPVQNGAPEEEQLPPE 919
>gi|40788007 FYN binding protein (FYB-120/130) isoform 2 [Homo
sapiens]
Length = 783
Score = 45.1 bits (105), Expect = 2e-04
Identities = 46/185 (24%), Positives = 71/185 (38%), Gaps = 12/185 (6%)
Query: 44 GGQTPYEATLQQGFQYPATTED--LPPL-TNGYPSSISVYETQTKYQSYNQYPNGSANGF 100
GG ++G + AT + LPPL T G P +++ +G++
Sbjct: 323 GGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSK 382
Query: 101 GAVRNFSPTDYYHSEIPNTRP-HEILEKPSPPQPPPPPSVPQTVIPKKTGSPEIKLKITK 159
G T Y + +P P H + P P P P VP +P + P LK
Sbjct: 383 GQ------TSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPS--LPPRNIKPPFDLKSPV 434
Query: 160 TIQNGRELFESSLCGDLLNEVQASEHTKSKHESRKEKRKKSNKHDSSRSEERKSHKIPKL 219
N + S G+L E + T E+ KE+ KK K + R E K + K
Sbjct: 435 NEDNQDGVTHSDGAGNLDEEQDSEGETYEDIEASKEREKKREKEEKKRLELEKKEQKEKE 494
Query: 220 EPEEQ 224
+ E++
Sbjct: 495 KKEQE 499
>gi|42476118 FYN binding protein (FYB-120/130) isoform 1 [Homo
sapiens]
Length = 829
Score = 45.1 bits (105), Expect = 2e-04
Identities = 46/185 (24%), Positives = 71/185 (38%), Gaps = 12/185 (6%)
Query: 44 GGQTPYEATLQQGFQYPATTED--LPPL-TNGYPSSISVYETQTKYQSYNQYPNGSANGF 100
GG ++G + AT + LPPL T G P +++ +G++
Sbjct: 323 GGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSK 382
Query: 101 GAVRNFSPTDYYHSEIPNTRP-HEILEKPSPPQPPPPPSVPQTVIPKKTGSPEIKLKITK 159
G T Y + +P P H + P P P P VP +P + P LK
Sbjct: 383 GQ------TSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPS--LPPRNIKPPFDLKSPV 434
Query: 160 TIQNGRELFESSLCGDLLNEVQASEHTKSKHESRKEKRKKSNKHDSSRSEERKSHKIPKL 219
N + S G+L E + T E+ KE+ KK K + R E K + K
Sbjct: 435 NEDNQDGVTHSDGAGNLDEEQDSEGETYEDIEASKEREKKREKEEKKRLELEKKEQKEKE 494
Query: 220 EPEEQ 224
+ E++
Sbjct: 495 KKEQE 499
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 43.9 bits (102), Expect = 5e-04
Identities = 60/301 (19%), Positives = 122/301 (40%), Gaps = 29/301 (9%)
Query: 176 LLNEVQASEHTKSKHESRKEKRKKSNKHDSSR------SEERKSHKIPKLEPEEQNRPNE 229
L ++ E + + E R+E+R K + + R SEE++ + +L E+Q R +
Sbjct: 598 LEQRLKREEVERLEQEERREQRLKREEPEEERRQQLLKSEEQEERRQQQLRREQQERREQ 657
Query: 230 RVDTVSEKPREEPVLKEEAPVQPILSSVPTTEVSTGVKFQVGDLVWSKVGTYPWWPCMVS 289
R+ E+ R E LK E + E++ + Q + + S++ + W +
Sbjct: 658 RLKREEEEERLEQRLKREHEEER-----REQELAEEEQEQARERIKSRIPKWQWQLESEA 712
Query: 290 SDPQLEVHTK----INTRGAREYHVQFFSNQPERAWVHEKRV-REYKGHKQYEELLAEAT 344
Q +V+++ R +E + + E W E+R R+ + +Q + +
Sbjct: 713 DARQSKVYSRPRKQEGQRRRQEQEEKRRRRESELQWQEEERAHRQQQEEEQRRDFTWQWQ 772
Query: 345 KQASNHSEKQKIRKPRPQRERAQWDIGIAHAEKALKMTREERIEQYTFIYIDKQPEEALS 404
+ + +Q++ P RE+ E+ L+ ++ EQ F+ +++ E+
Sbjct: 773 AEEKSERGRQRLSARPPLREQ---------RERQLRAEERQQREQ-RFLPEEEEKEQRRR 822
Query: 405 QAK---KSVASKTEVKKTRRPRSVLNTQPEQTNAGEVASSLSSTEIRRHSQRRHTSAEEE 461
Q + K + E ++ +R Q E+ E S E RR + R EE
Sbjct: 823 QRREREKELQFLEEEEQLQRRERAQQLQEEEDGLQEDQERRRSQEQRRDQKWRWQLEEER 882
Query: 462 E 462
+
Sbjct: 883 K 883
Score = 38.5 bits (88), Expect = 0.019
Identities = 63/321 (19%), Positives = 114/321 (35%), Gaps = 65/321 (20%)
Query: 176 LLNEVQASEHTKSKHESRKEKRKKSNKHDS--SRSEERKSHKIPKLEPE--EQNRPNERV 231
LL + + + E R KR++ + D R EER+ ++ + + E EQ E V
Sbjct: 549 LLKREEEKRLEQERREQRL-KREQEERRDQLLKREEERRQQRLKREQEERLEQRLKREEV 607
Query: 232 DTVSEKPREEPVLKEEAPVQPILSSVPTTEVSTGVKFQVGDLVWSKVGTYPWWPCMVSSD 291
+ + ++ R E LK E P + ++ S+
Sbjct: 608 ERLEQEERREQRLKREEPEEERRQQ------------------------------LLKSE 637
Query: 292 PQLEVHTKINTRGAREYHVQFFSNQPERAWVHEKRVREYKGHKQYEELLAEATKQASNHS 351
Q E + R +E Q + E + ++ RE++ ++ +EL E +QA
Sbjct: 638 EQEERRQQQLRREQQERREQRLKREEEEERLEQRLKREHEEERREQELAEEEQEQARERI 697
Query: 352 EKQ---------------------KIRKPRPQRERAQWDIGIAHAEKALKMTREERI--- 387
+ + + RK QR R + + E L+ EER
Sbjct: 698 KSRIPKWQWQLESEADARQSKVYSRPRKQEGQRRRQEQEEKRRRRESELQWQEEERAHRQ 757
Query: 388 ----EQYTFIYIDKQPEEALSQAKKSVASKTEVK--KTRRPRSVLNTQPEQTNAGEVASS 441
EQ Q EE + ++ ++++ ++ + R+ R+ Q EQ E
Sbjct: 758 QQEEEQRRDFTWQWQAEEKSERGRQRLSARPPLREQRERQLRAEERQQREQRFLPEEEEK 817
Query: 442 LSSTEIRRHSQRRHTSAEEEE 462
RR ++ EEEE
Sbjct: 818 EQRRRQRREREKELQFLEEEE 838
Score = 38.5 bits (88), Expect = 0.019
Identities = 43/164 (26%), Positives = 65/164 (39%), Gaps = 32/164 (19%)
Query: 311 QFFSNQPERAWVHEKRVREYKGHKQYEELLAEATKQASNHSEKQKIRKPRPQRERAQW-- 368
Q +PE+ +R K +++ EEL E E+Q +R+ R +R R +W
Sbjct: 972 QLLGEEPEK----RRRQEREKKYREEEELQQE---------EEQLLREEREKRRRQEWER 1018
Query: 369 -----DIGIAHAEKALKMTRE-----ERIEQYTFIYIDKQPEEALSQAKKSVASKTEVKK 418
D E+ L+ RE ER QY +Q EE L ++ + E+++
Sbjct: 1019 QYRKKDELQQEEEQLLREEREKRRLQERERQYREEEELQQEEEQLLGEERETRRRQELER 1078
Query: 419 TRRPRSVLNTQPEQTNAGEVASSLSSTEIRRHSQRRHTSAEEEE 462
R L + EQ E E RR +R EEEE
Sbjct: 1079 QYRKEEELQQEEEQLLREE-------PEKRRRQERERQCREEEE 1115
Score = 36.2 bits (82), Expect = 0.096
Identities = 54/283 (19%), Positives = 109/283 (38%), Gaps = 33/283 (11%)
Query: 181 QASEHTKSKHESRKEKRKKSNKHDSSRSEERKSHKIPKLEPEEQNRPNERVDTVSEKPRE 240
Q H + + +E++K++ + D EE++ + + E EE+ R E K RE
Sbjct: 1288 QRDRHFPEEEQLEREEQKEAKRRDRKSQEEKQ---LLREEREEKRRRQE----TDRKFRE 1340
Query: 241 EPVLKEEAPVQPILSSVPTTEVSTGVKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKI 300
E L +E QP+ KF+ +L + G LE ++
Sbjct: 1341 EEQLLQEREEQPLRRQ------ERDRKFREEELRHQEQGR-----------KFLEEEQRL 1383
Query: 301 NTRGAREYHVQFFSNQPERAWVHEKRVREYKGHKQYEELLAEATKQASNHSEKQKIRKPR 360
+ ++ Q R E+++R+ + K EE +Q S +K R+
Sbjct: 1384 RRQERERKFLK--EEQQLRCQEREQQLRQDRDRKFREE-----EQQLSRQERDRKFREEE 1436
Query: 361 PQRERAQWDIGIAHAEKALKMTREERIEQYTFIYIDKQPEEALSQAKKSVASKTEVKKTR 420
Q R + + E+ L+ R + + + + ++ E+ L + ++ E ++ R
Sbjct: 1437 QQVRRQERERKFLEEEQQLRQERHRKFREEEQL-LQEREEQQLHRQERDRKFLEEEQQLR 1495
Query: 421 RPRSVLNTQPEQTNAGEVASSLSSTEIRRHSQRRHTS-AEEEE 462
R + ++ + E E + H Q+R +EE+
Sbjct: 1496 RQERDRKFREQELRSQEPERKFLEEEQQLHRQQRQRKFLQEEQ 1538
Score = 35.4 bits (80), Expect = 0.16
Identities = 52/294 (17%), Positives = 108/294 (36%), Gaps = 21/294 (7%)
Query: 180 VQASEHTKSKHESRKEKRKKSNKHDSSRSEERKSHKIPKLEPEEQNRPNERVDTVSEKPR 239
++ + + RK +++ R ++R+ + K EEQ R +S + R
Sbjct: 1518 LEEEQQLHRQQRQRKFLQEEQQLRRQERGQQRRQDRDRKFREEEQLRQEREEQQLSRQER 1577
Query: 240 EEPVLKEEAPVQPILSSVPTTEVSTGVKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTK 299
+ EE V+ E ++ Q G + + D QL +
Sbjct: 1578 DRKFRLEEQKVRRQEQERKFMEDEQQLRRQEGQQQLRQERDRKF-----REDEQLLQERE 1632
Query: 300 INTRGAREYHVQFFSNQPE-RAWVHEKRVREYKGHK--QYEELLAEATKQASNHSEK--- 353
+E +F +P+ R E+++R + K + E+LL E +Q E+
Sbjct: 1633 EQQLHRQERDRKFLEEEPQLRRQEREQQLRHDRDRKFREEEQLLQEGEEQQLRRQERDRK 1692
Query: 354 -----QKIRKPRPQRERAQWDIGIAHAEKALKMTREERIEQYTFIYIDKQPEEALSQAKK 408
Q++R+ +R+ Q + + E K EE++ Q T +Q + + +
Sbjct: 1693 FREEEQQLRRQERERKFLQEEQQLRRQELERKFREEEQLRQET-----EQEQLRRQERYR 1747
Query: 409 SVASKTEVKKTRRPRSVLNTQPEQTNAGEVASSLSSTEIRRHSQRRHTSAEEEE 462
+ + +++ R + + + ++ E E + SQ EEE
Sbjct: 1748 KILEEEQLRPEREEQQLRRQERDRKFREEEQLRQEREEQQLRSQESDRKFREEE 1801
Score = 35.0 bits (79), Expect = 0.21
Identities = 51/288 (17%), Positives = 110/288 (38%), Gaps = 22/288 (7%)
Query: 180 VQASEHTKSKHESRKEKRKKSNKHDSSRSEERKSHKIPKLEPEEQNRPNERVDTVSEKPR 239
++ + + K E + ++++ + R E+++ + +L E++ R +++ E+ R
Sbjct: 300 LRREQQLRRKQEEERREQQEERREQQERREQQEERREQQLRREQEERREQQLRREQEEER 359
Query: 240 EEPVLKEEAPVQPILSSVPTTEVSTGVKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTK 299
E L+ E + + E + Q+ + + + QL +
Sbjct: 360 REQQLRREQEEERREQQL-RREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQ 418
Query: 300 INTRGAREYHVQFFSNQPERAWVHEKRVREYKGHKQYEELL-----AEATKQASNHSEKQ 354
+ RE ++ + HE+ RE + ++ EE E T++ KQ
Sbjct: 419 LR----REQQLRREQEEERHEQKHEQERREQRLKREQEERRDWLKREEETERHEQERRKQ 474
Query: 355 KIRKPRPQRERAQWDIGIAHAEKALKMTREERIEQYTFIYIDKQPEEALSQAKKSVASKT 414
++++ + + R +W LK+ EER EQ + E+ + ++ +
Sbjct: 475 QLKRDQEEERRERW----------LKLEEEERREQQERREQQLRREQEERREQRLKRQEE 524
Query: 415 EVKKTRRPRSVLNTQPEQTNAGEVASSLSSTEIRRHSQRRHTSAEEEE 462
E + +R RS + EQ E L E +R Q R + E
Sbjct: 525 EERLQQRLRSEQQLRREQEERRE--QLLKREEEKRLEQERREQRLKRE 570
Score = 34.7 bits (78), Expect = 0.28
Identities = 58/291 (19%), Positives = 115/291 (39%), Gaps = 26/291 (8%)
Query: 179 EVQASEHTKSKHESRKEKRKKSNKHDSSRSEERKSHKIPKL--EPEEQNRPNERVDTVSE 236
E Q + + +EKR++ + R +++ K +L E E+ R ER +
Sbjct: 933 EEQLQQEEEQLLREEREKRRRQERERQYRKDKKLQQKEEQLLGEEPEKRRRQER----EK 988
Query: 237 KPREEPVLKEEAPVQPILSSVPTTEVSTGVKFQVGDLVWSKVGTYPWWPCMVSSDPQLEV 296
K REE L++E + +L E + Q + + K + + + +
Sbjct: 989 KYREEEELQQEE--EQLLR-----EEREKRRRQEWERQYRKKDE-------LQQEEEQLL 1034
Query: 297 HTKINTRGAREYHVQFFSNQPERAWVHEKRVREYKGHKQYEELLAEATKQASNHSEKQKI 356
+ R +E Q+ + E E+ + E + ++ +EL + K+ E++++
Sbjct: 1035 REEREKRRLQERERQY-REEEELQQEEEQLLGEERETRRRQELERQYRKEEELQQEEEQL 1093
Query: 357 RKPRPQRERAQWDIGIAHAEKAL-----KMTREERIEQYTFIYIDKQPEEALSQAKKSVA 411
+ P++ R Q E+ L ++ REER ++ + EE Q ++
Sbjct: 1094 LREEPEKRRRQERERQCREEEELQQEEEQLLREEREKRRRQELERQYREEEEVQQEEEQL 1153
Query: 412 SKTEVKKTRRPRSVLNTQPEQTNAGEVASSLSSTEIRRHSQRRHTSAEEEE 462
+ E +K RR + E+ E L + +R +R EEEE
Sbjct: 1154 LREEPEKRRRQELERQYREEEELQQEEEQLLREEQEKRRQERERQYREEEE 1204
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 43.1 bits (100), Expect = 8e-04
Identities = 22/69 (31%), Positives = 36/69 (52%)
Query: 179 EVQASEHTKSKHESRKEKRKKSNKHDSSRSEERKSHKIPKLEPEEQNRPNERVDTVSEKP 238
E + +E + K RKEKRK+ K + + +++ K + E EE+ R +R E+
Sbjct: 15 ETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEE 74
Query: 239 REEPVLKEE 247
REE +EE
Sbjct: 75 REEEEEEEE 83
Score = 37.7 bits (86), Expect = 0.033
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 187 KSKHESRKEKRKKSNKHDSSRSEERKSHKIPKLEPEEQNRPNERVDTVSEKPREEPVLKE 246
K K + +K+K K++ K EE+K + K + EE+ R E + EK EE KE
Sbjct: 36 KRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEE---KE 92
Query: 247 E 247
E
Sbjct: 93 E 93
Score = 31.6 bits (70), Expect = 2.4
Identities = 15/67 (22%), Positives = 30/67 (44%)
Query: 181 QASEHTKSKHESRKEKRKKSNKHDSSRSEERKSHKIPKLEPEEQNRPNERVDTVSEKPRE 240
+ + + + E +K KRK+ K + EE + + + E EE+ R + +E
Sbjct: 48 ETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKE 107
Query: 241 EPVLKEE 247
E K++
Sbjct: 108 EEEEKKK 114
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 42.7 bits (99), Expect = 0.001
Identities = 102/498 (20%), Positives = 191/498 (38%), Gaps = 68/498 (13%)
Query: 146 KKTGSPEIKLKI---TKTIQNGRELFESSLCGDLLNEVQASEHTKSKHESRKEKRKKSNK 202
++T +P I + T T R++ S +C + + KS ++ K +K ++
Sbjct: 656 RRTSTPVIMEGVQEETDTRDVKRQVERSEIC------TEEPQKQKSTLKNEKHLKKDDSE 709
Query: 203 HDSSRSEERKSHKIPKLEPEEQNRPNERVDTVSEKPREEPVLKEEAPVQPILSSVPTTEV 262
+S +K K K +PE + P+E +V K + + + K + + SS +V
Sbjct: 710 TPHLKSLLKKEVKSSKEKPEREKTPSEDKLSVKHKYKGDCMHKTGDETE-LHSSEKGLKV 768
Query: 263 STGVKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKINTRGAREYHVQFFSNQPERAWV 322
++ Q +SSD + E K R R+ V +P ++
Sbjct: 769 EENIQKQSQQ-------------TKLSSDDKTE--RKSKHRNERKLSVLGKDGKPVSEYI 813
Query: 323 --HEKRVREYKGHKQYEELLAEATK--QASNHSEKQKIRKPRPQRERAQWDIGIAHAEKA 378
++ VR+ + +K+ L AE TK S S KI+K ++ GI ++
Sbjct: 814 IKTDENVRK-ENNKKERRLSAEKTKAEHKSRRSSDSKIQKDSLGSKQH----GITLQRRS 868
Query: 379 LKMTREERIEQYTFIYIDKQPEEALSQAKKSVASKTEVKKTRRPRSVLNTQPEQTNAGEV 438
+ ++ T + + +PEE + + K+ S E K + +S TQ +Q E
Sbjct: 869 ESYSEDKCDMDSTNMDSNLKPEEVVHKEKRRTKSLLEEKLVLKSKS--KTQGKQVKVVET 926
Query: 439 ASSLSSTE-------------IRRHSQRRHTSAEEEEP---PPVKIAWKTAAARKSLPAS 482
+T+ S+++ S E++P V+ +TA++
Sbjct: 927 ELQEGATKQATTPKPDKEKNTEENDSEKQRKSKVEDKPFEETGVEPVLETASSSAHSTQK 986
Query: 483 ITMHKGSLDLQKCNMSPVVKIEQVFALQNATGDGKFIDQFVYSTKGIGNKTEISVRGQDR 542
+ H+ L L K K L+ DG +S+K I K E
Sbjct: 987 DSSHRAKLPLAK-EKYKSDKDSTSTRLERKLSDGHKSRSLKHSSKDIKKKDE-------- 1037
Query: 543 LIISTPNQRNEKPTQSV-SSPEATSGSTGSVEKKQQRRSIRTRSESEKSTEVVPKKKIKK 601
N+ ++K + V SS E G++ +EKK RR R S ++K+
Sbjct: 1038 ------NKSDDKDGKEVDSSHEKARGNSSLMEKKLSRRLCENRRGSLSQEMAKGEEKLAA 1091
Query: 602 EQVETVPQATVKTGLQKG 619
+ T ++++ + G
Sbjct: 1092 NTLSTPSGSSLQRPKKSG 1109
Score = 33.9 bits (76), Expect = 0.48
Identities = 84/399 (21%), Positives = 145/399 (36%), Gaps = 71/399 (17%)
Query: 114 SEIPNTRPHEILEKPSPPQPPPPPSVPQTVIPKKTGSPEIKLKITKTIQNGRELFESSLC 173
+E N + E K P QP T K+ S ++ K T +G E E++
Sbjct: 222 TETSNAKTSERASKKLPSQP-----TTDTSTDKERTSEDMADKEKSTADSGGEGLETAPK 276
Query: 174 GDLLNEV-----QASEHTKS-----------KHESRKEKRKKSNKH----DSSRSEERKS 213
+ +++ + +TK + ES ++K K ++K DS+ ERK
Sbjct: 277 SEEFSDLPCPVEEIKNYTKEHNNLILLNKDVQQESSEQKNKSTDKGEKKPDSNEKGERKK 336
Query: 214 HKIPKLEPEEQNRPNERVDTVSEKPREEPVLKEEAPVQPILSSVPTTEVSTGVKFQVGDL 273
K K E ++ + + DT +K ++E KE+ L S + + V+ D
Sbjct: 337 EKKEKTE-KKFDHSKKSEDT--QKVKDEKQAKEKEVESLKLPSEKNSNKAKTVEGTKEDF 393
Query: 274 VWSKVGTYPWWPCMVSSDPQLEVHTKINTRGAREYHVQFFSNQPERAWVHEKRVREYKGH 333
++ SD ++ T I + F E V + E
Sbjct: 394 ------------SLIDSD--VDGLTDITVSSVHTSDLSSFEEDTEEEVVTSDSMEE---- 435
Query: 334 KQYEELLAEATKQASNHSEKQKIRKPRPQRERAQWDIGIAHAEKALKMTREERIEQ---Y 390
E T S+ EK K K + Q + +E K R + + Y
Sbjct: 436 -------GEIT---SDDEEKNKQNKTKTQTSDS--------SEGKTKSVRHAYVHKPYLY 477
Query: 391 TFIYIDKQPEEALSQAKKSVASKTEVKKTRRP--RSVLNTQPEQTNAGEVASSLSSTEIR 448
+ Y D E + Q ++S+A + E + RR R L + +Q A + SS + + R
Sbjct: 478 SKYYSDSDDELTVEQRRQSIAKEKEERLLRRQINREKLEEKRKQ-KAEKTKSSKTKGQGR 536
Query: 449 RHSQRRHTSAEEEEPPPVKIAWKTAAARKSLPASITMHK 487
+S + EP +I + RK L + + K
Sbjct: 537 SSVDLEESSTKSLEPKAARIK-EVLKERKVLEKKVALSK 574
Score = 30.4 bits (67), Expect = 5.3
Identities = 12/25 (48%), Positives = 13/25 (52%)
Query: 127 KPSPPQPPPPPSVPQTVIPKKTGSP 151
+P PP PPPPP PQ P P
Sbjct: 8 QPPPPAPPPPPPQPQPQPPPPPPGP 32
Score = 29.6 bits (65), Expect = 9.0
Identities = 21/96 (21%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Query: 550 QRNEKPTQSVSSPEATSGSTGSVEKKQQ-RRSIRTRSESEKSTEVVPKKKIKKEQVETVP 608
Q+N+ + P++ EKK++ + +SE + +V +K+ K+++VE++
Sbjct: 314 QKNKSTDKGEKKPDSNEKGERKKEKKEKTEKKFDHSKKSEDTQKVKDEKQAKEKEVESLK 373
Query: 609 QATVKTGLQKGSADRGVQGSVRFSDSSVSAAIEETV 644
+ K K G + DS V + TV
Sbjct: 374 LPSEKNS-NKAKTVEGTKEDFSLIDSDVDGLTDITV 408
>gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo
sapiens]
Length = 1158
Score = 42.4 bits (98), Expect = 0.001
Identities = 43/149 (28%), Positives = 61/149 (40%), Gaps = 27/149 (18%)
Query: 117 PNTRPHEILEKPSPPQPPPPPSVPQTVIPKKTGSPEIKLKITKTIQNGRELFESSLCGDL 176
P P E LE P PP P P P +P++ G+P ++ QN E
Sbjct: 171 PILAPSETLEWPLPPPPSPGPE----ELPQEGGAP-----LSNNWQNPGE---------- 211
Query: 177 LNEVQASEHTKSKHESRKEKRKKSN----KHDSSRSEERKSHKIPKLEPEEQNRPNERV- 231
V+A EH E ++ N + D E + K P+ P + RP ERV
Sbjct: 212 ETHVEAREHQPEPEEETEQPTLDYNDQIEREDYEDFEYIRRQKQPRPPPSRRRRP-ERVW 270
Query: 232 -DTVSEK-PREEPVLKEEAPVQPILSSVP 258
+ EK P P + E PV+P+L +P
Sbjct: 271 PEPPEEKAPAPAPEERIEPPVKPLLPPLP 299
Score = 35.8 bits (81), Expect = 0.13
Identities = 69/342 (20%), Positives = 121/342 (35%), Gaps = 45/342 (13%)
Query: 187 KSKHESRKEKRKKSNK--HDSSRSEERKSHKIPKLEPEEQNRPNERVDTVSEKPREEPVL 244
K+K + +K K+ K K +S R K + P+ +P E+ ++KP+E+P
Sbjct: 89 KTKDKGKKGKKDKGPKVPKESLEGSPRPPKKGKEKPPKATKKPKEKPPKATKKPKEKPPK 148
Query: 245 KEEAPVQ--PILSSVPTTEVSTGVKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKINT 302
+ P + P + P + + L W P + + +
Sbjct: 149 ATKKPKEKPPKATKKPPSGKRPPILAPSETLEWPLPPPPSPGPEELPQEGGAPLSNNWQN 208
Query: 303 RGAREYHVQFFSNQPERAWVHEKRVREYKGHKQYEELLAEATKQASNHSEKQKIRKPRPQ 362
G E HV+ +QPE E+ +Y + E+ + + +QK +P P
Sbjct: 209 PG-EETHVEAREHQPEPEEETEQPTLDYNDQIEREDY------EDFEYIRRQKQPRPPPS 261
Query: 363 RERAQWDI-GIAHAEKALKMTREERIEQ----------------YTF-------IYIDKQ 398
R R + EKA EERIE Y Y
Sbjct: 262 RRRRPERVWPEPPEEKAPAPAPEERIEPPVKPLLPPLPPDYGDGYVIPNYDDMDYYFGPP 321
Query: 399 PEEALSQAKKSVASKTEVKKTRRPRSVLNTQPEQTNAGEVASSLSSTEIRR--HSQRRHT 456
P + +++ K E+KK P+ ++ E+T+ V E R+ + T
Sbjct: 322 PPQKPDAERQTDEEKEELKK---PKKEDSSPKEETDKWAVEKGKDHKEPRKGEELEEEWT 378
Query: 457 SAEEEEPPPV-----KIAWKTAAARKSLPASITMHKGSLDLQ 493
E+ + PP+ +I A L + +G L++Q
Sbjct: 379 PTEKVKCPPIGMESHRIEDNQIRASSMLRHGLGAQRGRLNMQ 420
>gi|104526627 triadin [Homo sapiens]
Length = 729
Score = 42.0 bits (97), Expect = 0.002
Identities = 96/508 (18%), Positives = 183/508 (36%), Gaps = 68/508 (13%)
Query: 126 EKPSPPQPPPPPSVPQTVIPKKTGSPEIKL-----KITKTIQNGRELFESSLCGDLLNEV 180
EK + P + + I KK PE K K KT + E + EV
Sbjct: 172 EKVREKEKPEKKATHKEKIEKKE-KPETKTLAKEQKKAKTAEKSEEKTKK--------EV 222
Query: 181 QASEHTKSKHESRKEKRKKSNKHDSSRSEERKSHKIPKLEPEEQNRPNERVDTV------ 234
+ + K K + K K + E+++ + K E ++Q + +
Sbjct: 223 KGGKQEKVKQTAAKVKEVQKTPSKPKEKEDKEKAAVSKHEQKDQYAFCRYMIDIFVHGDL 282
Query: 235 --SEKPREEPVLKEEAPVQPILSSVPTTEVSTGVKFQVGDLVWSKVGTYPWWPCMVSSDP 292
+ P P L E +P +S P E G K + V S+ S+
Sbjct: 283 KPGQSPAIPPPLPTEQASRPTPAS-PALEEKEGEKKKAEKKVTSETKKKEKEDIKKKSEK 341
Query: 293 QLEVHTKINT--------RGAREYHVQFFSNQPERAWVHEK-----RVREYKGHKQYE-E 338
+ + + +G + Q + + E+ +K V + KG KQ + E
Sbjct: 342 ETAIDVEKKEPGKASETKQGTVKIAAQAAAKKDEKKEDSKKTKKPAEVEQPKGKKQEKKE 401
Query: 339 LLAEATKQASNHSEKQKIRKPRPQRERAQWDIGIAHAEKALKMTREERIEQYTFIYIDKQ 398
E K ++ + + ERA+ +IG +KA+ +EE+ + I K+
Sbjct: 402 KHVEPAKSPKKEHSVPSDKQVKAKTERAKEEIGAVSIKKAVPGKKEEKTTKTVEQEIRKE 461
Query: 399 PEEALSQAKKSVASKTEVKKTRRPRSVLNTQPEQTNAGEVASSLSSTEIRRHSQRRHTSA 458
S K + K+ + P S+ +PE + S + E++ +
Sbjct: 462 KSGKTSSILKD-KEPIKGKEEKVPASLKEKEPETKK--DEKMSKAGKEVKPKPPQLQGKK 518
Query: 459 EEEEPPPVKIAWKTAAARKSLPASITMHKGSLDLQKCNMSPVVKIEQVFALQNATGDGKF 518
EE+ P +K K A + K + +HK +VK E+ GK
Sbjct: 519 EEKPEPQIKKEAKPAISEK-----VQIHK----------QDIVKPEK------TVSHGKP 557
Query: 519 IDQFVYSTKGIGNKTEISVRGQDRLIISTPNQRNEKPTQSVSSPEATSGSTGSVEKKQQR 578
++ + K + I + + ++ E P+ P+ T T V + ++
Sbjct: 558 EEKVLKQVKAV----TIEKTAKPKPTKKAEHREREPPSIKTDKPKPTPKGTSEVTESGKK 613
Query: 579 RSIRTRSESEKSTEVVPKKKIKKEQVET 606
++ + ES++ ++ K +++E+V T
Sbjct: 614 KTEISEKESKEKADM---KHLREEKVST 638
Score = 35.0 bits (79), Expect = 0.21
Identities = 59/272 (21%), Positives = 105/272 (38%), Gaps = 36/272 (13%)
Query: 374 HAEKALKMTREERIEQYTFIYIDKQPEEALSQAKKSVASKTEVKKTRRPRSVLNTQPEQT 433
H +K K + ER Q + +K+ + + K+ K E K T + + +PE
Sbjct: 144 HKDKTEKQEKPERKIQTKVTHKEKEKGKEKVREKE----KPEKKATHKEKIEKKEKPETK 199
Query: 434 NAGEVASSLSSTEIRRHSQRRHTSAEEEEPPPVKIAWKTAAARKSLPASITMHKGSLDLQ 493
+ + E ++ ++E VK +TAA K + + + K D +
Sbjct: 200 TLAKEQKKAKTAEKSEEKTKKEVKGGKQEK--VK---QTAAKVKEVQKTPSKPKEKEDKE 254
Query: 494 KCNMSPVVKIEQVFALQNATGDGKFIDQFVYSTKGIGNKTEISVRGQDRLIISTPNQRNE 553
K +S K EQ DQ+ + I +I V G D +P
Sbjct: 255 KAAVS---KHEQK-------------DQYAFCRYMI----DIFVHG-DLKPGQSPAIPPP 293
Query: 554 KPTQSVSSPEATSGSTGSVEKKQQRRSIRTRSESEKSTEVVPKKKIKKEQVETVPQATVK 613
PT+ S P S + E ++++ + SE++K + KKK +KE V +
Sbjct: 294 LPTEQASRPTPASPALEEKEGEKKKAEKKVTSETKKKEKEDIKKKSEKETAIDVEKK--- 350
Query: 614 TGLQKGSADRGVQGSVRFSDSSVSAAIEETVD 645
+ G A QG+V+ + + + E+ D
Sbjct: 351 ---EPGKASETKQGTVKIAAQAAAKKDEKKED 379
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 41.2 bits (95), Expect = 0.003
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 128 PSPPQPPPPPSVPQTVIPKKTGSPEIKLKITKTIQNGRELFES 170
P PP PPPPP +P PK T P+ KL + + LF++
Sbjct: 2416 PPPPPPPPPPPLPPPTSPKPTILPKKKLTVASPVTTATPLFDA 2458
Score = 33.9 bits (76), Expect = 0.48
Identities = 33/153 (21%), Positives = 68/153 (44%), Gaps = 15/153 (9%)
Query: 107 SPTDYYHSEIPNTRPHEILEKPSPPQPPPPPSVPQT----------VIPKKTGSPEIKLK 156
SP+ + E+ ++ P + +P P P P + ++ +P ++ S I LK
Sbjct: 78 SPSMHRKQELDSSHPPKQSGRPPDPGRPAQPGLSKSRTTDTFRSEQKLPGRSPST-ISLK 136
Query: 157 ITKTIQNGRELFESSLCGDLLNEVQASEHTKSKHESRKEKRKKSNKHDSSRSEERKSHKI 216
+K+ + +E +SS+ L+EV A S S K + S + + ++ K
Sbjct: 137 ESKSRTDLKEEHKSSMMPGFLSEVNAL----SAVSSVVNKFNPFDLISDSEASQEETTKK 192
Query: 217 PKLEPEEQNRPNERVDTVSEKPREEPVLKEEAP 249
K+ +EQ +P + ++ +P+ K++ P
Sbjct: 193 QKVVQKEQGKPEGIIKPPLQQQPPKPIPKQQGP 225
Score = 30.4 bits (67), Expect = 5.3
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 397 KQPEEALSQAKKSVASKTEVKKTRRPRSVLNTQPEQTNAGE-----VASSLSSTEIRRHS 451
KQP EA S +K + + V + V + +P+Q + V+SS ++T+ S
Sbjct: 721 KQPPEADSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPS 780
Query: 452 QRRHTSAEEEEPPPVK 467
+ + AEE+ PP+K
Sbjct: 781 SKVQSQAEEKTTPPLK 796
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 41.2 bits (95), Expect = 0.003
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 128 PSPPQPPPPPSVPQTVIPKKTGSPEIKLKITKTIQNGRELFES 170
P PP PPPPP +P PK T P+ KL + + LF++
Sbjct: 2416 PPPPPPPPPPPLPPPTSPKPTILPKKKLTVASPVTTATPLFDA 2458
Score = 33.9 bits (76), Expect = 0.48
Identities = 33/153 (21%), Positives = 68/153 (44%), Gaps = 15/153 (9%)
Query: 107 SPTDYYHSEIPNTRPHEILEKPSPPQPPPPPSVPQT----------VIPKKTGSPEIKLK 156
SP+ + E+ ++ P + +P P P P + ++ +P ++ S I LK
Sbjct: 78 SPSMHRKQELDSSHPPKQSGRPPDPGRPAQPGLSKSRTTDTFRSEQKLPGRSPST-ISLK 136
Query: 157 ITKTIQNGRELFESSLCGDLLNEVQASEHTKSKHESRKEKRKKSNKHDSSRSEERKSHKI 216
+K+ + +E +SS+ L+EV A S S K + S + + ++ K
Sbjct: 137 ESKSRTDLKEEHKSSMMPGFLSEVNAL----SAVSSVVNKFNPFDLISDSEASQEETTKK 192
Query: 217 PKLEPEEQNRPNERVDTVSEKPREEPVLKEEAP 249
K+ +EQ +P + ++ +P+ K++ P
Sbjct: 193 QKVVQKEQGKPEGIIKPPLQQQPPKPIPKQQGP 225
Score = 30.4 bits (67), Expect = 5.3
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 397 KQPEEALSQAKKSVASKTEVKKTRRPRSVLNTQPEQTNAGE-----VASSLSSTEIRRHS 451
KQP EA S +K + + V + V + +P+Q + V+SS ++T+ S
Sbjct: 721 KQPPEADSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPS 780
Query: 452 QRRHTSAEEEEPPPVK 467
+ + AEE+ PP+K
Sbjct: 781 SKVQSQAEEKTTPPLK 796
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.125 0.349
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,966,420
Number of Sequences: 37866
Number of extensions: 1408333
Number of successful extensions: 17256
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 499
Number of HSP's that attempted gapping in prelim test: 12946
Number of HSP's gapped (non-prelim): 3715
length of query: 645
length of database: 18,247,518
effective HSP length: 109
effective length of query: 536
effective length of database: 14,120,124
effective search space: 7568386464
effective search space used: 7568386464
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.