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Search of human proteins with 13624333
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13624333 defensin, beta 126 preproprotein [Homo sapiens]
(111 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13624333 defensin, beta 126 preproprotein [Homo sapiens] 233 3e-62
gi|16905373 beta-defensin 118 [Homo sapiens] 44 4e-05
gi|76563936 defensin, beta 125 preproprotein [Homo sapiens] 42 8e-05
gi|83582798 beta-defensin 115 [Homo sapiens] 42 1e-04
gi|58865339 defensin, beta 121 [Homo sapiens] 38 0.002
gi|37704382 defensin, beta 119 isoform a precursor [Homo sapiens] 37 0.003
gi|113417084 PREDICTED: hypothetical protein [Homo sapiens] 32 0.084
gi|83582802 beta-defensin 128 [Homo sapiens] 32 0.14
gi|239749510 PREDICTED: hypothetical protein, partial [Homo sapi... 31 0.19
gi|82734223 beta-defensin 124 [Homo sapiens] 30 0.32
gi|122937388 MAX gene associated [Homo sapiens] 30 0.32
gi|169167859 PREDICTED: hypothetical protein, partial [Homo sapi... 30 0.42
gi|148806908 fibronectin type III domain containing 1 [Homo sapi... 30 0.42
gi|83582800 beta-defensin 116 [Homo sapiens] 30 0.54
gi|91982772 mucin 17 [Homo sapiens] 29 0.71
gi|239508973 PREDICTED: similar to Mucin-3A [Homo sapiens] 29 0.92
gi|32967601 ankyrin 3 isoform 1 [Homo sapiens] 28 1.2
gi|18250304 beta defensin 129 precursor [Homo sapiens] 28 1.2
gi|161019170 mucin 5AC [Homo sapiens] 28 1.6
gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens] 28 1.6
gi|239743291 PREDICTED: mucin 3A, intestinal [Homo sapiens] 28 1.6
gi|6912276 cysteine-rich hydrophobic domain 2 [Homo sapiens] 28 1.6
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 28 1.6
gi|239757995 PREDICTED: similar to hCG1747327, partial [Homo sap... 28 2.1
gi|239757478 PREDICTED: defensin, beta 117 [Homo sapiens] 28 2.1
gi|239751980 PREDICTED: defensin, beta 117 [Homo sapiens] 28 2.1
gi|169214154 PREDICTED: hypothetical protein [Homo sapiens] 28 2.1
gi|169171850 PREDICTED: similar to intestinal mucin MUC3B [Homo ... 28 2.1
gi|239746467 PREDICTED: defensin, beta 117 [Homo sapiens] 28 2.1
gi|169213511 PREDICTED: hypothetical protein [Homo sapiens] 28 2.1
>gi|13624333 defensin, beta 126 preproprotein [Homo sapiens]
Length = 111
Score = 233 bits (593), Expect = 3e-62
Identities = 111/111 (100%), Positives = 111/111 (100%)
Query: 1 MKSLLFTLAVFMLLAQLVSGNWYVKKCLNDVGICKKKCKPEEMHVKNGWAMCGKQRDCCV 60
MKSLLFTLAVFMLLAQLVSGNWYVKKCLNDVGICKKKCKPEEMHVKNGWAMCGKQRDCCV
Sbjct: 1 MKSLLFTLAVFMLLAQLVSGNWYVKKCLNDVGICKKKCKPEEMHVKNGWAMCGKQRDCCV 60
Query: 61 PADRRANYPVFCVQTKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPTG 111
PADRRANYPVFCVQTKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPTG
Sbjct: 61 PADRRANYPVFCVQTKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPTG 111
>gi|16905373 beta-defensin 118 [Homo sapiens]
Length = 123
Score = 43.5 bits (101), Expect = 4e-05
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 1 MKSLLFTLAVFMLLAQLVSGNWYVKKCLNDVGICKKKCKPEEMHVKNGWAMCGKQRDCCV 60
MK LL L + +LL Q++ KKC N G C+K+CK E VK+ C R CC+
Sbjct: 1 MKLLLLALPMLVLLPQVIPAYSGEKKCWNRSGHCRKQCKDGEA-VKD---TCKNLRACCI 56
Query: 61 PAD 63
P++
Sbjct: 57 PSN 59
>gi|76563936 defensin, beta 125 preproprotein [Homo sapiens]
Length = 156
Score = 42.4 bits (98), Expect = 8e-05
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 17/122 (13%)
Query: 1 MKSLLFTLAVFMLLAQLVSGNWYVKKCL-NDVGICKKKCKPEEMHVKNGWAMCGKQRDCC 59
M L+ T + LL ++ G++ +KC N+VG C+++C E ++ +C + CC
Sbjct: 1 MNILMLTFIICGLLTRVTKGSFEPQKCWKNNVGHCRRRCLDTERYI----LLCRNKLSCC 56
Query: 60 VPA-----DRRANYPVFCVQTKTTRISTVTATTATTTLMM-------TTASMSSMAPTPV 107
+ RR +PV ++ T S V + T + M+ TT +M P
Sbjct: 57 ISIISHEYTRRPAFPVIHLEDITLDYSDVDSFTGSPVSMLNDLITFDTTKFGETMTPETN 116
Query: 108 SP 109
+P
Sbjct: 117 TP 118
>gi|83582798 beta-defensin 115 [Homo sapiens]
Length = 88
Score = 41.6 bits (96), Expect = 1e-04
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 1 MKSLLFTLAVFMLLAQLVSGNWYVKKCLNDVGICKKKCKPEEMHVKNGWAMCGKQRDCCV 60
+K + L V ++LAQ W +++C G C+K CK E + CG++ CCV
Sbjct: 13 IKLSVLALVVLVVLAQTAPDGW-IRRCYYGTGRCRKSCKEIERKKEK----CGEKHICCV 67
Query: 61 PADR 64
P ++
Sbjct: 68 PKEK 71
>gi|58865339 defensin, beta 121 [Homo sapiens]
Length = 76
Score = 37.7 bits (86), Expect = 0.002
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 1 MKSLLFTLAVFMLLAQLVSGNWYVKKCLNDVGICKKKCKPEEMHVKNGWAMCGKQRDCCV 60
MK LL L V +LLAQ+ V KC G C+ CK E++ + +C + CCV
Sbjct: 1 MKLLLLLLTVTLLLAQVTP----VMKCWGKSGRCRTTCKESEVY----YILCKTEAKCCV 52
>gi|37704382 defensin, beta 119 isoform a precursor [Homo sapiens]
Length = 84
Score = 37.0 bits (84), Expect = 0.003
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 1 MKSLLFTLAVFMLLAQ-LVSGNWYVKKCLNDVGICKKKCKPEEMHVKNGWAMCGKQRDCC 59
MK L LA+ + + + ++SG ++ +C+ + GIC+ CK E + C + CC
Sbjct: 1 MKLLYLFLAILLAIEEPVISGKRHILRCMGNSGICRASCKKNE----QPYLYCRNCQSCC 56
Query: 60 VPADRR 65
+ + R
Sbjct: 57 LQSYMR 62
>gi|113417084 PREDICTED: hypothetical protein [Homo sapiens]
Length = 194
Score = 32.3 bits (72), Expect = 0.084
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
T TT I+T+T TT TTT TT + ++ T + T
Sbjct: 84 TSTTTITTITTTTTTTTTTTTTITTTTTTTTTTTTT 119
Score = 30.4 bits (67), Expect = 0.32
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 69 PVFCVQTKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
P + T TT +T+T TT+T T TT S +++ + T
Sbjct: 56 PTTTITTTTTTTTTITTTTSTITTTTTTTSTTTITTITTTTT 97
Score = 30.4 bits (67), Expect = 0.32
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPT 105
T TT +T+T TT TTT TT +++++ T
Sbjct: 98 TTTTTTTTITTTTTTTTTTTTTTTITTITTT 128
Score = 29.3 bits (64), Expect = 0.71
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
T TT I+T T+T TTT +T +++++ T + T
Sbjct: 65 TTTTTITTTTSTITTTTTTTSTTTITTITTTTTTTT 100
Score = 28.9 bits (63), Expect = 0.92
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 73 VQTKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
+ T T+ I+T T TT+TTT+ T + ++ T + T
Sbjct: 70 ITTTTSTITTTTTTTSTTTITTITTTTTTTTTTTTTIT 107
Score = 28.1 bits (61), Expect = 1.6
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
T TT +T T T TTT +TT ++++ T ++ T
Sbjct: 141 TITTITTTTTTTITTTTTTITTTTITTTTTTTITTT 176
Score = 27.7 bits (60), Expect = 2.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
T TT +T+T T TTT +TT + ++ T + T
Sbjct: 114 TTTTTTTTITTITTTTTTTITTTTTTTTITTITTTT 149
Score = 26.9 bits (58), Expect = 3.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
T TT +T+T T TTT TT + + T + T
Sbjct: 81 TTTTSTTTITTITTTTTTTTTTTTTITTTTTTTTTT 116
Score = 26.9 bits (58), Expect = 3.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
T TT +T+T T TTT +TT + + T + T
Sbjct: 134 TTTTTTTTITTITTTTTTTITTTTTTITTTTITTTT 169
Score = 26.9 bits (58), Expect = 3.5
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 73 VQTKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
+ T TT I+T T TT TTT +TT + ++ T + T
Sbjct: 153 ITTTTTTITTTTITTTTTT-TITTTTTTTTITTITTTT 189
Score = 26.6 bits (57), Expect = 4.6
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 75 TKTTRISTVTATTATT-TLMMTTASMSSMAPTPVSPT 110
T TT ST+T TT TT T +TT + ++ T + T
Sbjct: 69 TITTTTSTITTTTTTTSTTTITTITTTTTTTTTTTTT 105
Score = 26.2 bits (56), Expect = 6.0
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 77 TTRISTVTATTATTTL-MMTTASMSSMAPTPVSPT 110
TT +T+T TT TTT+ +TT + +++ T + T
Sbjct: 127 TTTTTTITTTTTTTTITTITTTTTTTITTTTTTIT 161
>gi|83582802 beta-defensin 128 [Homo sapiens]
Length = 93
Score = 31.6 bits (70), Expect = 0.14
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 8 LAVFMLLAQLVSGNWYVKKCLNDV-GICKKKCKPEEMH 44
L + +LL ++++ +KKC N V G C+KKCK E +
Sbjct: 5 LVLIILLFEVLTDGARLKKCFNKVTGYCRKKCKVGERY 42
>gi|239749510 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 108
Score = 31.2 bits (69), Expect = 0.19
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 73 VQTKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
+ T TT T T T TTT MTT +++S+ T + T
Sbjct: 61 ITTTTTMTITTTTMTTTTTTTMTTTTITSITNTTTTTT 98
Score = 29.6 bits (65), Expect = 0.54
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 77 TTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
TT I+ T TT TTT+ +TT + ++ T ++ T
Sbjct: 44 TTTIAMTTTTTTTTTMTITTTTTMTITTTTMTTT 77
Score = 29.3 bits (64), Expect = 0.71
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
T TT +T T T TTT+ MTT + ++ T + T
Sbjct: 30 TTTTNTTTTTITITTTTIAMTTTTTTTTTMTITTTT 65
Score = 29.3 bits (64), Expect = 0.71
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
T TT +T+T TT TTT+ +TT +M++ T ++ T
Sbjct: 51 TTTTTTTTMTITT-TTTMTITTTTMTTTTTTTMTTT 85
Score = 29.3 bits (64), Expect = 0.71
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
T TT +T T T TTT+ T + ++ TP PT
Sbjct: 70 TTTTMTTTTTTTMTTTTITSITNTTTTTTMTPPPPT 105
Score = 26.9 bits (58), Expect = 3.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 77 TTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
TT +T T T TTT+ +TT +++ T + T
Sbjct: 25 TTITNTTTTNTTTTTITITTTTIAMTTTTTTTTT 58
>gi|82734223 beta-defensin 124 [Homo sapiens]
Length = 71
Score = 30.4 bits (67), Expect = 0.32
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 1 MKSLLFTLAVFMLLAQLVSGNWYVKKCLNDVGICKKKCKPEEMHVKNGWAMCGKQRDCCV 60
M LL L ++L + SG K+C G C+ C +E ++ +C CC+
Sbjct: 1 MTQLLLFLVALLVLGHVPSGRSEFKRCWKGQGACQTYCTRQETYMH----LCPDASLCCL 56
>gi|122937388 MAX gene associated [Homo sapiens]
Length = 3114
Score = 30.4 bits (67), Expect = 0.32
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 68 YPVFCVQTKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPTG 111
+P V + +T V +T +T+ +++T A+ SSM TP S G
Sbjct: 1724 FPKSLVASPSTITLPVASTASTSLVVVTAAASSSMVTTPTSSLG 1767
>gi|169167859 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 214
Score = 30.0 bits (66), Expect = 0.42
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
T TT +T T TT TTT +TT +++ T ++ T
Sbjct: 110 TTTTITTTTTTTTTTTTTTITTTITTTITTTTITTT 145
Score = 29.6 bits (65), Expect = 0.54
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 77 TTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
TT +T+T TT TTT + TT ++++ T + T
Sbjct: 87 TTTTTTITTTTTTTTTITTTTTITTTTITTTTTT 120
Score = 29.3 bits (64), Expect = 0.71
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
T T +T+T TT TTT+ TT ++ T ++ T
Sbjct: 134 TTTITTTTITTTTTTTTITTTTTITTTTTTTTITTT 169
Score = 29.3 bits (64), Expect = 0.71
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
T TT +T T TT TTT +TT + +++ + ++ T
Sbjct: 147 TTTTITTTTTITTTTTTTTITTTTTTTITTSTITTT 182
Score = 28.9 bits (63), Expect = 0.92
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
T TT +T+T TT TTT + TT + + T T
Sbjct: 60 TTTTTTTTITTTTTTTTTITTTTTTITTTTTTTITT 95
Score = 28.9 bits (63), Expect = 0.92
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 73 VQTKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
+ T TT +T+T TT TT +TT + ++ T + T
Sbjct: 93 ITTTTTTTTTITTTTTITTTTITTTTTTTTTTTTTTIT 130
Score = 28.9 bits (63), Expect = 0.92
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
T TT I+T T TT TTT +TT + + T + T
Sbjct: 132 TITTTITTTTITTTTTTTTITTTTTITTTTTTTTIT 167
Score = 28.5 bits (62), Expect = 1.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
T T +T+T TT TTT TT + ++ T ++ T
Sbjct: 101 TTITTTTTITTTTITTTTTTTTTTTTTTITTTITTT 136
Score = 28.5 bits (62), Expect = 1.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
T TT +T+T T TTT+ TT + + T ++ T
Sbjct: 125 TTTTITTTITTTITTTTITTTTTTTTITTTTTITTT 160
Score = 28.5 bits (62), Expect = 1.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
T TT +T T TT TTT +TT + ++ T + T
Sbjct: 138 TTTTITTTTTTTTITTTTTITTTTTTTTITTTTTTT 173
Score = 28.1 bits (61), Expect = 1.6
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
T T +T T TT TTT +TT ++++ T + T
Sbjct: 90 TTTITTTTTTTTTITTTTTITTTTITTTTTTTTTTT 125
Score = 27.3 bits (59), Expect = 2.7
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
T TT I+T T TT TT+ +TT + + T + T
Sbjct: 169 TTTTTITTSTITTTTTSTTITTTTTITTTTTITTTT 204
Score = 27.3 bits (59), Expect = 2.7
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 73 VQTKTTRISTVTATTATTTLMMTTASMSSMAPTPVS 108
+ T TT + T TT TTT +TT + ++ T ++
Sbjct: 179 ITTTTTSTTITTTTTITTTTTITTTTTTTTITTTIT 214
Score = 26.9 bits (58), Expect = 3.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
T T +T+T TT TTT TT +++ T + T
Sbjct: 106 TTTITTTTITTTTTTTTTTTTTTITTTITTTITTTT 141
Score = 26.9 bits (58), Expect = 3.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 77 TTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
TT +T+T TT TTT TT + ++ T + T
Sbjct: 131 TTITTTITTTTITTTTTTTTITTTTTITTTTTTT 164
Score = 26.9 bits (58), Expect = 3.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
T T ST+T TT +TT+ TT ++ T + T
Sbjct: 171 TTTITTSTITTTTTSTTITTTTTITTTTTITTTTTT 206
Score = 26.2 bits (56), Expect = 6.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
T T +T T T TTT +TT + +++ T + T
Sbjct: 66 TTITTTTTTTTTITTTTTTITTTTTTTITTTTTTTT 101
Score = 25.8 bits (55), Expect = 7.8
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
T TT +T TT TTT +TT + + T + T
Sbjct: 59 TTTTTTTTTITTTTTTTTTITTTTTTITTTTTTTIT 94
Score = 25.8 bits (55), Expect = 7.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
T +T +T T+TT TTT +TT + + T + T
Sbjct: 175 TTSTITTTTTSTTITTTTTITTTTTITTTTTTTTIT 210
>gi|148806908 fibronectin type III domain containing 1 [Homo sapiens]
Length = 1894
Score = 30.0 bits (66), Expect = 0.42
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query: 75 TKTTRISTVTATTAT----TTLMMTTASMSSMAPTPVSP 109
T TTR +T T T T TT+ TT + ++ PTP +P
Sbjct: 1470 TATTRRTTTTRRTTTRRPTTTVRTTTRTTTTTTPTPTTP 1508
Score = 28.1 bits (61), Expect = 1.6
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 74 QTKTTRISTV---TATTATTTLMMTTASMSSMAPTPVSPTG 111
+T TTR +T T T TTT TT + + P P P G
Sbjct: 1475 RTTTTRRTTTRRPTTTVRTTTRTTTTTTPTPTTPIPTCPPG 1515
>gi|83582800 beta-defensin 116 [Homo sapiens]
Length = 102
Score = 29.6 bits (65), Expect = 0.54
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 14/70 (20%)
Query: 1 MKSLLFTLAVFMLLAQLVSGNWY----------VKKCLNDVGICKKKCKPEEMHVKNGWA 50
MK L T+A+ M+LAQ G + C G+C+ C+ E+ +
Sbjct: 4 MKPCLMTIAILMILAQKTPGGLFRSHNGKSREPWNPCELYQGMCRNACREYEIQ----YL 59
Query: 51 MCGKQRDCCV 60
C + CC+
Sbjct: 60 TCPNDQKCCL 69
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 29.3 bits (64), Expect = 0.71
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 53 GKQRDCCVPADRRANYPVFCVQTK---TTRISTVTATTATTTLMMTTASMSSMAPTPVSP 109
G P +RR V T ++ ST++ T A T+ +TT++ +S +PT
Sbjct: 2974 GTSMPISTPGERRTPLTSMSVSTMPVASSEASTLSRTPADTSTPVTTSTEASSSPTTAEG 3033
Query: 110 TG 111
TG
Sbjct: 3034 TG 3035
Score = 28.1 bits (61), Expect = 1.6
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 69 PVFCVQTKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
P+ + TT +++ A+T +TT + T+ +++ +PT SPT
Sbjct: 3459 PLSIMPLSTTPVASSEASTLSTTPVDTSTPVTTSSPTNSSPT 3500
Score = 27.7 bits (60), Expect = 2.1
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 69 PVFCVQTKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
PV ++ I+T++ T A T +TT S +S +PT T
Sbjct: 1932 PVSTTTVASSEINTLSTTLADTRTPVTTYSQASSSPTTADGT 1973
Score = 27.3 bits (59), Expect = 2.7
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 69 PVFCVQTKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
PV ++ I++++ T A T+ +TT S +S +PT T
Sbjct: 1520 PVSTTTVASSEINSLSTTPAVTSTPVTTYSQASSSPTTADGT 1561
Score = 27.3 bits (59), Expect = 2.7
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 69 PVFCVQTKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
PV + T+ ST++AT T+ +TT++ ++ +PT T
Sbjct: 2226 PVSTMPVVTSEASTLSATPVDTSTPVTTSTEATSSPTTAEGT 2267
Score = 26.6 bits (57), Expect = 4.6
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 69 PVFCVQTKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
P + T+ +ST++ T T+ ++TT++ S PT T
Sbjct: 340 PASTMPVATSEMSTLSITPVDTSTLVTTSTEPSSLPTTAEAT 381
Score = 26.6 bits (57), Expect = 4.6
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 67 NYPVFCVQTKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
N PV + ++ ST + + +TTAS +S +PT T
Sbjct: 397 NMPVSTILVASSEASTTSTIPVDSKTFVTTASEASSSPTTAEDT 440
Score = 26.2 bits (56), Expect = 6.0
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 69 PVFCVQTKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
PV ++ ST++ T T++ +TT++ S +PT T
Sbjct: 2875 PVSTTPVASSEASTLSTTPVDTSIPVTTSTEGSSSPTTAEGT 2916
Score = 25.8 bits (55), Expect = 7.8
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 69 PVFCVQTKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
PV + ST++ T A T+ +TT S + +PT T
Sbjct: 2344 PVSTTMVASFETSTLSTTPADTSTPVTTYSQAGSSPTTADDT 2385
Score = 25.8 bits (55), Expect = 7.8
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 66 ANYPVFCVQTKTTRISTVTATTATTTLMMTTASMSSMAPT 105
A+ PV ++ T++ T T+ MTT++ +S +PT
Sbjct: 2459 ASMPVSTTPVVSSEAGTLSTTPVDTSTPMTTSTEASSSPT 2498
Score = 25.8 bits (55), Expect = 7.8
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 69 PVFCVQTKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
PV ++ ST++ T T++ +TT++ +S +PT T
Sbjct: 2580 PVSTKPLASSEASTLSTTPVDTSIPVTTSTETSSSPTTAKDT 2621
Score = 25.8 bits (55), Expect = 7.8
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 77 TTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
++ STV+ T T++ +TT++ +S +PT T
Sbjct: 2765 SSEASTVSTTAVDTSIPVTTSTEASSSPTTAEVT 2798
Score = 25.8 bits (55), Expect = 7.8
Identities = 10/40 (25%), Positives = 24/40 (60%)
Query: 66 ANYPVFCVQTKTTRISTVTATTATTTLMMTTASMSSMAPT 105
A+ PV ++ ++T++ T + ++TT++ +S +PT
Sbjct: 3402 ASMPVSTTPVVSSEVNTLSTTPVDSNTLVTTSTEASSSPT 3441
>gi|239508973 PREDICTED: similar to Mucin-3A [Homo sapiens]
Length = 596
Score = 28.9 bits (63), Expect = 0.92
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Query: 75 TKTTRISTVTATTATTTLMMT---TASMSSMAPTPVSPT 110
+ +T STVT+ +T+T +T T S +++ PTPV+P+
Sbjct: 403 SSSTIYSTVTSHISTSTTAITSHFTTSETAVTPTPVTPS 441
Score = 27.3 bits (59), Expect = 2.7
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
T T+ I++ +T T T M TTAS + T SPT
Sbjct: 254 TSTSPITSSITSTNTVTSMTTTASQPTATNTLSSPT 289
>gi|32967601 ankyrin 3 isoform 1 [Homo sapiens]
Length = 4377
Score = 28.5 bits (62), Expect = 1.2
Identities = 13/24 (54%), Positives = 14/24 (58%)
Query: 72 CVQTKTTRISTVTATTATTTLMMT 95
CV T TT +T T TT TTT T
Sbjct: 3958 CVTTTTTTATTTTTTTTTTTTSCT 3981
>gi|18250304 beta defensin 129 precursor [Homo sapiens]
Length = 183
Score = 28.5 bits (62), Expect = 1.2
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Query: 1 MKSLLFTLAVFMLLAQLVSGNWYVKKCLNDVGICKKKCKPEEMHVKNGWAMCGKQRDCCV 60
MK L A ML Q+ + +++CL +G C+ C +E ++ C K + CCV
Sbjct: 1 MKLLFPIFASLMLQYQVNTEFIGLRRCLMGLGRCRDHCNVDEKEIQK----C-KMKKCCV 55
>gi|161019170 mucin 5AC [Homo sapiens]
Length = 6207
Score = 28.1 bits (61), Expect = 1.6
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 76 KTTRISTVTATTATTTLMMTTASMSSMAPTP 106
+TT STV T ATTT T+SMS+ + TP
Sbjct: 3684 ETTHTSTVLTTKATTT--RATSSMSTPSSTP 3712
Score = 27.3 bits (59), Expect = 2.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 73 VQTKTTRISTVTATTATTTLMMTTASMSSMAPT 105
+ T +T +T T+T TTT MT A+ S+ P+
Sbjct: 5100 IHTSSTPETTHTSTVLTTTATMTRATNSTATPS 5132
Score = 26.9 bits (58), Expect = 3.5
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 77 TTRISTVTATTATTTLMMTTASMSSMAPTP 106
TTRI T TTATTT T S ++++ TP
Sbjct: 5137 TTRILTELTTTATTT--AATGSTATLSSTP 5164
Score = 25.8 bits (55), Expect = 7.8
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 76 KTTRISTVTATTATTTLMMTTASMSSMAP 104
+TT STV T ATTT ++ S S P
Sbjct: 4831 ETTHTSTVLTTKATTTRATSSTSTPSSTP 4859
>gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens]
Length = 2639
Score = 28.1 bits (61), Expect = 1.6
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 8/47 (17%)
Query: 72 CVQTKTTRISTVT--------ATTATTTLMMTTASMSSMAPTPVSPT 110
CV TT +T T TT T T T S S PTP++ T
Sbjct: 1296 CVTQPTTMTTTTTENPTPTPITTTTTVTPTPTPTSTQSTTPTPITTT 1342
Score = 28.1 bits (61), Expect = 1.6
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPVS 108
T T T T T TT+++TT + + PTP S
Sbjct: 1573 TTVTPTPTPTGTQTPTTVLITTTTTMTPTPTPTS 1606
Score = 27.3 bits (59), Expect = 2.7
Identities = 22/83 (26%), Positives = 31/83 (37%), Gaps = 18/83 (21%)
Query: 38 CKPEEMHVKNG--------WAMCG------KQRDCCVPADRRANYPVFCVQTKTTRISTV 83
C+PEE + N W +CG K + C R + F T + T
Sbjct: 1122 CRPEEGKILNQTQDGAFCYWEICGPNGTVEKHFNICSITTRPSTLTTFT----TITLPTT 1177
Query: 84 TATTATTTLMMTTASMSSMAPTP 106
T TTT T S + ++ TP
Sbjct: 1178 PTTFTTTTTTTTPTSSTVLSTTP 1200
Score = 27.3 bits (59), Expect = 2.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 78 TRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
T+ T T T TTT+ T + APTP + T
Sbjct: 1423 TQTPTTTPITTTTTVTPTPTPTGTQAPTPTAIT 1455
Score = 26.9 bits (58), Expect = 3.5
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 77 TTRISTVTATTATTTLMMTTASMSSMAPT--PVSPT 110
+T+ +TVT T TTT+ T + PT P+S T
Sbjct: 1606 STKSTTVTPITTTTTVTATPTPTGTQTPTMIPISTT 1641
Score = 25.8 bits (55), Expect = 7.8
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 78 TRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
T+ T T T TTT+ T + PTP + T
Sbjct: 1469 TQTPTTTPITTTTTVTPTPTPTGTQTPTPTAIT 1501
>gi|239743291 PREDICTED: mucin 3A, intestinal [Homo sapiens]
Length = 1486
Score = 28.1 bits (61), Expect = 1.6
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 75 TKTTRISTVTATTATTTLMMT---TASMSSMAPTPVSPT 110
T + ST+ +T +T+T +T T S +++ PTPV+P+
Sbjct: 603 TPSLSSSTIYSTVSTSTTAITSHFTTSETAVTPTPVTPS 641
Score = 27.3 bits (59), Expect = 2.7
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
T T+ I++ +T T T M TTAS + T SPT
Sbjct: 254 TSTSPITSSITSTNTVTSMTTTASQPTATNTLSSPT 289
>gi|6912276 cysteine-rich hydrophobic domain 2 [Homo sapiens]
Length = 165
Score = 28.1 bits (61), Expect = 1.6
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 25 KKCLNDVGICKKKCKPEEMHVKNGWAMCGKQRDCCVPADRRANYPVFCVQTKTTR 79
K +N V C KK P + W +CG CC + +PV C+ +T R
Sbjct: 65 KASINRVNSCLKKNLPVNVR----WLLCGCLCCCCTLG--CSMWPVICLSKRTRR 113
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 28.1 bits (61), Expect = 1.6
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 76 KTTRISTVTATTATTTLMMTTASMSSMAPTP 106
+TT STV T ATTT T+SMS+ + TP
Sbjct: 3104 ETTHTSTVLTTKATTT--RATSSMSTPSSTP 3132
Score = 27.3 bits (59), Expect = 2.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 73 VQTKTTRISTVTATTATTTLMMTTASMSSMAPT 105
+ T +T +T T+T TTT MT A+ S+ P+
Sbjct: 4781 IHTSSTPETTHTSTVLTTTATMTRATNSTATPS 4813
Score = 26.9 bits (58), Expect = 3.5
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 77 TTRISTVTATTATTTLMMTTASMSSMAPTP 106
TTRI T TTATTT T S ++++ TP
Sbjct: 4818 TTRILTELTTTATTT--AATGSTATLSSTP 4845
Score = 25.8 bits (55), Expect = 7.8
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 76 KTTRISTVTATTATTTLMMTTASMSSMAP 104
+TT STV T ATTT ++ S S P
Sbjct: 4361 ETTHTSTVLTTKATTTRATSSTSTPSSTP 4389
>gi|239757995 PREDICTED: similar to hCG1747327, partial [Homo
sapiens]
Length = 1064
Score = 27.7 bits (60), Expect = 2.1
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 75 TKTTRISTVTATTATT--TLMMTTASMSSMAPTPVSPT 110
T TT +T+++TT TT T + T + ++M+PTPV T
Sbjct: 208 TDTTFHTTISSTTRTTERTPLPTGSIHTTMSPTPVFTT 245
Score = 26.9 bits (58), Expect = 3.5
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPVSPT 110
T+ T + +T T + TT + T+S TP++PT
Sbjct: 346 TEITYSTVLTGTLSPTTTLPPTSSSQQTTETPMTPT 381
>gi|239757478 PREDICTED: defensin, beta 117 [Homo sapiens]
Length = 53
Score = 27.7 bits (60), Expect = 2.1
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Query: 25 KKCLNDVGICKKKCKPEEMHVKNGWAMCGKQRDCCVPAD 63
K C G C+K CKP E K C CC+P++
Sbjct: 16 KSCWIIKGHCRKNCKPGEQVKK----PCKNGDYCCIPSN 50
>gi|239751980 PREDICTED: defensin, beta 117 [Homo sapiens]
Length = 53
Score = 27.7 bits (60), Expect = 2.1
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Query: 25 KKCLNDVGICKKKCKPEEMHVKNGWAMCGKQRDCCVPAD 63
K C G C+K CKP E K C CC+P++
Sbjct: 16 KSCWIIKGHCRKNCKPGEQVKK----PCKNGDYCCIPSN 50
>gi|169214154 PREDICTED: hypothetical protein [Homo sapiens]
Length = 737
Score = 27.7 bits (60), Expect = 2.1
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPV 107
T T+ ST T+TT+T+T +T S S+ A + +
Sbjct: 203 TSTSTSSTFTSTTSTSTTSTSTTSTSTSATSSI 235
>gi|169171850 PREDICTED: similar to intestinal mucin MUC3B [Homo
sapiens]
Length = 385
Score = 27.7 bits (60), Expect = 2.1
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 75 TKTTRISTVTATTATT--TLMMTTASMSSMAPTPVSPT 110
T TT +T+++TT TT T + T + ++M+PTPV T
Sbjct: 148 TDTTFHTTISSTTRTTERTPLPTGSIHTTMSPTPVFTT 185
Score = 27.7 bits (60), Expect = 2.1
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 69 PVFCVQTKTTRISTVTATT----ATTTLMMTTASMSSMAPTP 106
P+ T T ++++T TT AT TL T+S+ S P P
Sbjct: 195 PITSTITSTNTVTSMTTTTSRPTATNTLSSLTSSILSSTPAP 236
>gi|239746467 PREDICTED: defensin, beta 117 [Homo sapiens]
Length = 53
Score = 27.7 bits (60), Expect = 2.1
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Query: 25 KKCLNDVGICKKKCKPEEMHVKNGWAMCGKQRDCCVPAD 63
K C G C+K CKP E K C CC+P++
Sbjct: 16 KSCWIIKGHCRKNCKPGEQVKK----PCKNGDYCCIPSN 50
>gi|169213511 PREDICTED: hypothetical protein [Homo sapiens]
Length = 737
Score = 27.7 bits (60), Expect = 2.1
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 75 TKTTRISTVTATTATTTLMMTTASMSSMAPTPV 107
T T+ ST T+TT+T+T +T S S+ A + +
Sbjct: 203 TSTSTSSTFTSTTSTSTTSTSTTSTSTSATSSI 235
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.128 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,935,366
Number of Sequences: 37866
Number of extensions: 154605
Number of successful extensions: 1476
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 835
Number of HSP's gapped (non-prelim): 715
length of query: 111
length of database: 18,247,518
effective HSP length: 81
effective length of query: 30
effective length of database: 15,180,372
effective search space: 455411160
effective search space used: 455411160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.