Search of human proteins with 6912494

Search of human proteins with 6912494

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|6912494 microtubule-associated protein, RP/EB family, member
1 [Homo sapiens]
         (268 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|6912494 microtubule-associated protein, RP/EB family, member ...   539   e-154
gi|10800412 microtubule-associated protein, RP/EB family, member...   348   3e-96
gi|219842325 microtubule-associated protein, RP/EB family, membe...   310   6e-85
gi|219842327 microtubule-associated protein, RP/EB family, membe...   310   6e-85
gi|10346135 microtubule-associated protein, RP/EB family, member...   310   6e-85
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]                36   0.040
gi|29126241 ferritin mitochondrial [Homo sapiens]                      33   0.20 
gi|19913406 DNA topoisomerase II, alpha isozyme [Homo sapiens]         32   0.45 
gi|27262638 sperm associated antigen 1 [Homo sapiens]                  32   0.45 
gi|27262636 sperm associated antigen 1 [Homo sapiens]                  32   0.45 
gi|157649073 adenylyl cyclase-associated protein [Homo sapiens]        32   0.58 
gi|5453595 adenylyl cyclase-associated protein [Homo sapiens]          32   0.58 
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]     32   0.58 
gi|170784854 PTPRF interacting protein, binding protein 2 (lipri...    32   0.58 
gi|219804203 rabphilin 3A homolog isoform 1 [Homo sapiens]             31   0.99 
gi|45267837 rabphilin 3A homolog isoform 2 [Homo sapiens]              31   0.99 
gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]                  30   1.7  
gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]                30   1.7  
gi|153070260 myristoylated alanine-rich protein kinase C substra...    30   2.2  
gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens]                   30   2.2  
gi|157388975 coiled-coil domain containing 99 [Homo sapiens]           30   2.2  
gi|18079216 CASK interacting protein 1 [Homo sapiens]                  30   2.9  
gi|122056614 LIM domain binding 3 isoform 2 [Homo sapiens]             30   2.9  
gi|239753405 PREDICTED: hypothetical protein [Homo sapiens]            30   2.9  
gi|189458819 transferrin receptor [Homo sapiens]                       30   2.9  
gi|189458817 transferrin receptor [Homo sapiens]                       30   2.9  
gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta ...    30   2.9  
gi|22749459 glypican 2 [Homo sapiens]                                  30   2.9  
gi|42821110 hypothetical protein LOC340602 [Homo sapiens]              29   3.8  
gi|222080058 Smith-Magenis syndrome chromosome region, candidate...    29   3.8  

>gi|6912494 microtubule-associated protein, RP/EB family, member 1
           [Homo sapiens]
          Length = 268

 Score =  539 bits (1389), Expect = e-154
 Identities = 268/268 (100%), Positives = 268/268 (100%)

Query: 1   MAVNVYSTSVTSDNLSRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLFPGSIALKK 60
           MAVNVYSTSVTSDNLSRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLFPGSIALKK
Sbjct: 1   MAVNVYSTSVTSDNLSRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLFPGSIALKK 60

Query: 61  VKFQAKLEHEYIQNFKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYD 120
           VKFQAKLEHEYIQNFKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYD
Sbjct: 61  VKFQAKLEHEYIQNFKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYD 120

Query: 121 GKDYDPVAARQGQETAVAPSLVAPALNKPKKPLTSSSAAPQRPISTQRTAAAPKAGPGVV 180
           GKDYDPVAARQGQETAVAPSLVAPALNKPKKPLTSSSAAPQRPISTQRTAAAPKAGPGVV
Sbjct: 121 GKDYDPVAARQGQETAVAPSLVAPALNKPKKPLTSSSAAPQRPISTQRTAAAPKAGPGVV 180

Query: 181 RKNPGVGNGDDEAAELMQQVNVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDPVLQ 240
           RKNPGVGNGDDEAAELMQQVNVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDPVLQ
Sbjct: 181 RKNPGVGNGDDEAAELMQQVNVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDPVLQ 240

Query: 241 RIVDILYATDEGFVIPDEGGPQEEQEEY 268
           RIVDILYATDEGFVIPDEGGPQEEQEEY
Sbjct: 241 RIVDILYATDEGFVIPDEGGPQEEQEEY 268


>gi|10800412 microtubule-associated protein, RP/EB family, member 3
           [Homo sapiens]
          Length = 281

 Score =  348 bits (893), Expect = 3e-96
 Identities = 184/283 (65%), Positives = 214/283 (75%), Gaps = 17/283 (6%)

Query: 1   MAVNVYSTSVTSDNLSRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLFPGSIALKK 60
           MAVNVYSTSVTS+NLSRHDMLAW+N+SL LN TKIEQLCSGAAYCQFMDMLFPG + L+K
Sbjct: 1   MAVNVYSTSVTSENLSRHDMLAWVNDSLHLNYTKIEQLCSGAAYCQFMDMLFPGCVHLRK 60

Query: 61  VKFQAKLEHEYIQNFKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYD 120
           VKFQAKLEHEYI NFK+LQA FK+MGVDKIIPV+KLVKGKFQDNFEF+QWFKKFFDANYD
Sbjct: 61  VKFQAKLEHEYIHNFKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDANYD 120

Query: 121 GKDYDPVAARQGQETAVAPSLVAPALNKPKKPLTSSSAAPQR-----PISTQRTAAAPK- 174
           GKDY+P+ ARQGQ+ A  P+      NK KK +   +A PQR     P + Q +      
Sbjct: 121 GKDYNPLLARQGQDVAPPPNPGDQIFNKSKKLI--GTAVPQRTSPTGPKNMQTSGRLSNV 178

Query: 175 AGPGVVRKNP-----GVGNGDDEAAELMQQVNVLKLTVEDLEKERDFYFGKLRNIELICQ 229
           A P ++RKNP     G    D +  EL QQ+  LKLTV+ LEKERDFYF KLR+IELICQ
Sbjct: 179 APPCILRKNPPSARNGGHETDAQILELNQQLVDLKLTVDGLEKERDFYFSKLRDIELICQ 238

Query: 230 ENEGENDPVLQRIVDILYATDEGFVIPD----EGGPQEEQEEY 268
           E+E EN PV+  I+ ILYAT+EGF  P+    E   QE+Q+EY
Sbjct: 239 EHESENSPVISGIIGILYATEEGFAPPEDDEIEEHQQEDQDEY 281


>gi|219842325 microtubule-associated protein, RP/EB family, member 2
           isoform 2 [Homo sapiens]
          Length = 284

 Score =  310 bits (795), Expect = 6e-85
 Identities = 156/282 (55%), Positives = 199/282 (70%), Gaps = 27/282 (9%)

Query: 1   MAVNVYSTSVTSDNLSRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLFPGSIALKK 60
           MAVNVYSTS+T + +SRHD++AW+N+ + LN TK+EQLCSGAAYCQFMDMLFPG I+LKK
Sbjct: 1   MAVNVYSTSITQETMSRHDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFPGCISLKK 60

Query: 61  VKFQAKLEHEYIQNFKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYD 120
           VKFQAKLEHEYI NFK+LQA FKRM VDK+IPV+KLVKG+FQDN +F+QWFKKF+DANYD
Sbjct: 61  VKFQAKLEHEYIHNFKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYD 120

Query: 121 GKDYDPVAARQGQETAVAPSLVAPALNKPKK---------------PLTSSSAAPQRPIS 165
           GK+YDPV ARQGQ+    P       N PKK               P     + P RP S
Sbjct: 121 GKEYDPVEARQGQDAIPPPDPGEQIFNLPKKSHHANSPTAGAAKSSPAAKPGSTPSRPSS 180

Query: 166 TQRTAAAPKAGPGVVRKNPGVGNGDDEAAELMQQVNVLKLTVEDLEKERDFYFGKLRNIE 225
            +R +++  A       +    + + +  +L +QV+ LKL +E +EKERDFYFGKLR IE
Sbjct: 181 AKRASSSGSA-------SKSDKDLETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIE 233

Query: 226 LICQENEGENDPVLQRIVDILYATDEGFVIPDEGGPQEEQEE 267
           L+CQE+  END ++QR++DILYA++E      EG  +E + E
Sbjct: 234 LLCQEHGQENDDLVQRLMDILYASEE-----HEGHTEEPEAE 270


>gi|219842327 microtubule-associated protein, RP/EB family, member 2
           isoform 3 [Homo sapiens]
          Length = 315

 Score =  310 bits (795), Expect = 6e-85
 Identities = 156/282 (55%), Positives = 199/282 (70%), Gaps = 27/282 (9%)

Query: 1   MAVNVYSTSVTSDNLSRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLFPGSIALKK 60
           MAVNVYSTS+T + +SRHD++AW+N+ + LN TK+EQLCSGAAYCQFMDMLFPG I+LKK
Sbjct: 32  MAVNVYSTSITQETMSRHDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFPGCISLKK 91

Query: 61  VKFQAKLEHEYIQNFKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYD 120
           VKFQAKLEHEYI NFK+LQA FKRM VDK+IPV+KLVKG+FQDN +F+QWFKKF+DANYD
Sbjct: 92  VKFQAKLEHEYIHNFKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYD 151

Query: 121 GKDYDPVAARQGQETAVAPSLVAPALNKPKK---------------PLTSSSAAPQRPIS 165
           GK+YDPV ARQGQ+    P       N PKK               P     + P RP S
Sbjct: 152 GKEYDPVEARQGQDAIPPPDPGEQIFNLPKKSHHANSPTAGAAKSSPAAKPGSTPSRPSS 211

Query: 166 TQRTAAAPKAGPGVVRKNPGVGNGDDEAAELMQQVNVLKLTVEDLEKERDFYFGKLRNIE 225
            +R +++  A       +    + + +  +L +QV+ LKL +E +EKERDFYFGKLR IE
Sbjct: 212 AKRASSSGSA-------SKSDKDLETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIE 264

Query: 226 LICQENEGENDPVLQRIVDILYATDEGFVIPDEGGPQEEQEE 267
           L+CQE+  END ++QR++DILYA++E      EG  +E + E
Sbjct: 265 LLCQEHGQENDDLVQRLMDILYASEE-----HEGHTEEPEAE 301


>gi|10346135 microtubule-associated protein, RP/EB family, member 2
           isoform 1 [Homo sapiens]
          Length = 327

 Score =  310 bits (795), Expect = 6e-85
 Identities = 156/282 (55%), Positives = 199/282 (70%), Gaps = 27/282 (9%)

Query: 1   MAVNVYSTSVTSDNLSRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLFPGSIALKK 60
           MAVNVYSTS+T + +SRHD++AW+N+ + LN TK+EQLCSGAAYCQFMDMLFPG I+LKK
Sbjct: 44  MAVNVYSTSITQETMSRHDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFPGCISLKK 103

Query: 61  VKFQAKLEHEYIQNFKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYD 120
           VKFQAKLEHEYI NFK+LQA FKRM VDK+IPV+KLVKG+FQDN +F+QWFKKF+DANYD
Sbjct: 104 VKFQAKLEHEYIHNFKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYD 163

Query: 121 GKDYDPVAARQGQETAVAPSLVAPALNKPKK---------------PLTSSSAAPQRPIS 165
           GK+YDPV ARQGQ+    P       N PKK               P     + P RP S
Sbjct: 164 GKEYDPVEARQGQDAIPPPDPGEQIFNLPKKSHHANSPTAGAAKSSPAAKPGSTPSRPSS 223

Query: 166 TQRTAAAPKAGPGVVRKNPGVGNGDDEAAELMQQVNVLKLTVEDLEKERDFYFGKLRNIE 225
            +R +++  A       +    + + +  +L +QV+ LKL +E +EKERDFYFGKLR IE
Sbjct: 224 AKRASSSGSA-------SKSDKDLETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIE 276

Query: 226 LICQENEGENDPVLQRIVDILYATDEGFVIPDEGGPQEEQEE 267
           L+CQE+  END ++QR++DILYA++E      EG  +E + E
Sbjct: 277 LLCQEHGQENDDLVQRLMDILYASEE-----HEGHTEEPEAE 313


>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
          Length = 2303

 Score = 35.8 bits (81), Expect = 0.040
 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 20/89 (22%)

Query: 131  QGQETAVAPSLVAPALNKPKKP--------------LTSSSAAPQRPISTQRTAAAPKAG 176
            QG++ A APS  APA   P +               L+SS+++   P  ++  A  P+  
Sbjct: 1543 QGRKEAPAPSKAAPAAPPPARTQPSLIADETPPCYSLSSSASSLSEPEPSEPPAVHPRGR 1602

Query: 177  PGVVRKNPGVGNGDDE------AAELMQQ 199
               V K+PG G G D       A EL+Q+
Sbjct: 1603 EPAVTKDPGPGGGRDSSPSPRAAEELLQR 1631


>gi|29126241 ferritin mitochondrial [Homo sapiens]
          Length = 242

 Score = 33.5 bits (75), Expect = 0.20
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 8/75 (10%)

Query: 149 PKKPLTSSSAAPQRPIS---TQRTAAAPKAGPGVVRKNPGVGNGDDEAAELMQQVNVLKL 205
           P +PL     AP+RP++   + R    P AGP  VR+N    + D EAA + +Q+N L+L
Sbjct: 34  PGRPLDPRQIAPRRPLAAAASSRDPTGPAAGPSRVRQN---FHPDSEAA-INRQIN-LEL 88

Query: 206 TVEDLEKERDFYFGK 220
               +     +YF +
Sbjct: 89  YASYVYLSMAYYFSR 103


>gi|19913406 DNA topoisomerase II, alpha isozyme [Homo sapiens]
          Length = 1531

 Score = 32.3 bits (72), Expect = 0.45
 Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 1/88 (1%)

Query: 149  PKKPLTSSSAAPQRPISTQRTAAAPKAGPGVVRKNPGVGNGDDEAAELMQQVNVLKLTVE 208
            PKK +T    A +   ST  T A  +A P   +++P + +G  +  +  +  N  K    
Sbjct: 1410 PKKNVTVKKTAAKSQSSTSTTGAKKRAAPKGTKRDPALNSGVSQKPDPAKTKNRRK-RKP 1468

Query: 209  DLEKERDFYFGKLRNIELICQENEGEND 236
                + D  F K+ +  +  ++++GE+D
Sbjct: 1469 STSDDSDSNFEKIVSKAVTSKKSKGESD 1496


>gi|27262638 sperm associated antigen 1 [Homo sapiens]
          Length = 926

 Score = 32.3 bits (72), Expect = 0.45
 Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 14/103 (13%)

Query: 112 KKFFDANYDGKDYDPVAARQGQETAVAPSLVA-----------PALNKPKKPLTSSSAAP 160
           +K  D   D K  +P  A +  +  V  ++             PA   P++  T  + A 
Sbjct: 356 RKHEDGGGDKKPAEPAGAARAAQPCVMGNIQKKLTGKAEGGKRPARGAPQRGQTPEAGAD 415

Query: 161 QRPISTQRTAAAPKAGPGVVRKNPGVGNGDDEAAELMQQVNVL 203
           +R  S +R +AA  AG G    +PG G G +  A L  Q N L
Sbjct: 416 KR--SPRRASAAAAAGGGATG-HPGGGQGAENPAGLKSQGNEL 455


>gi|27262636 sperm associated antigen 1 [Homo sapiens]
          Length = 926

 Score = 32.3 bits (72), Expect = 0.45
 Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 14/103 (13%)

Query: 112 KKFFDANYDGKDYDPVAARQGQETAVAPSLVA-----------PALNKPKKPLTSSSAAP 160
           +K  D   D K  +P  A +  +  V  ++             PA   P++  T  + A 
Sbjct: 356 RKHEDGGGDKKPAEPAGAARAAQPCVMGNIQKKLTGKAEGGKRPARGAPQRGQTPEAGAD 415

Query: 161 QRPISTQRTAAAPKAGPGVVRKNPGVGNGDDEAAELMQQVNVL 203
           +R  S +R +AA  AG G    +PG G G +  A L  Q N L
Sbjct: 416 KR--SPRRASAAAAAGGGATG-HPGGGQGAENPAGLKSQGNEL 455


>gi|157649073 adenylyl cyclase-associated protein [Homo sapiens]
          Length = 475

 Score = 32.0 bits (71), Expect = 0.58
 Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 3/99 (3%)

Query: 131 QGQETAVAPSLVAPALNKPKKPLTSSSAAPQRPISTQRTAAAPKAGPG---VVRKNPGVG 187
           QG+    A   V+  +   K P   + + P R      +A  P+  P      +K P V 
Sbjct: 263 QGESITHALKHVSDDMKTHKNPALKAQSGPVRSGPKPFSAPKPQTSPSPKRATKKEPAVL 322

Query: 188 NGDDEAAELMQQVNVLKLTVEDLEKERDFYFGKLRNIEL 226
             + +   +  Q NV  L +ED E ++  Y  K  N  L
Sbjct: 323 ELEGKKWRVENQENVSNLVIEDTELKQVAYIYKCVNTTL 361


>gi|5453595 adenylyl cyclase-associated protein [Homo sapiens]
          Length = 475

 Score = 32.0 bits (71), Expect = 0.58
 Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 3/99 (3%)

Query: 131 QGQETAVAPSLVAPALNKPKKPLTSSSAAPQRPISTQRTAAAPKAGPG---VVRKNPGVG 187
           QG+    A   V+  +   K P   + + P R      +A  P+  P      +K P V 
Sbjct: 263 QGESITHALKHVSDDMKTHKNPALKAQSGPVRSGPKPFSAPKPQTSPSPKRATKKEPAVL 322

Query: 188 NGDDEAAELMQQVNVLKLTVEDLEKERDFYFGKLRNIEL 226
             + +   +  Q NV  L +ED E ++  Y  K  N  L
Sbjct: 323 ELEGKKWRVENQENVSNLVIEDTELKQVAYIYKCVNTTL 361


>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
          Length = 532

 Score = 32.0 bits (71), Expect = 0.58
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 6/77 (7%)

Query: 113 KFFDANYDGKDYDPVAARQGQETAVAPSLVAPALNKPKKPLTSSSAAPQRPISTQRTAAA 172
           K  +++  G +  P AA  G E++  P LV+P+     +P +SS+ +P    +    AAA
Sbjct: 413 KVHESSPQGSESSP-AASSGYESSTPPGLVSPS----AEPQSSSNLSP-AAAAAAAAAAA 466

Query: 173 PKAGPGVVRKNPGVGNG 189
             A    V +  G G+G
Sbjct: 467 AAAAVSAVHRGGGSGSG 483


>gi|170784854 PTPRF interacting protein, binding protein 2 (liprin
           beta 2) [Homo sapiens]
          Length = 876

 Score = 32.0 bits (71), Expect = 0.58
 Identities = 15/31 (48%), Positives = 23/31 (74%)

Query: 192 EAAELMQQVNVLKLTVEDLEKERDFYFGKLR 222
           +A EL+Q++  LK+ VE+LE ER+ Y  KL+
Sbjct: 204 KAEELLQELRHLKIKVEELENERNQYEWKLK 234


>gi|219804203 rabphilin 3A homolog isoform 1 [Homo sapiens]
          Length = 694

 Score = 31.2 bits (69), Expect = 0.99
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 131 QGQETAVAPSLVAPALNKPKKPLTSSSAAPQRPI-STQRTAAAPKAGPGVVRKNPGVGNG 189
           +G    V P  +     KP++P+ S  AAP++P    +  A AP  G    R+ PG   G
Sbjct: 159 KGFPKQVLPQPMPIKKTKPQQPV-SEPAAPEQPAPEPKHPARAPARGDSEDRRGPGQKTG 217

Query: 190 DDEAA 194
            D A+
Sbjct: 218 PDPAS 222


>gi|45267837 rabphilin 3A homolog isoform 2 [Homo sapiens]
          Length = 690

 Score = 31.2 bits (69), Expect = 0.99
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 131 QGQETAVAPSLVAPALNKPKKPLTSSSAAPQRPI-STQRTAAAPKAGPGVVRKNPGVGNG 189
           +G    V P  +     KP++P+ S  AAP++P    +  A AP  G    R+ PG   G
Sbjct: 155 KGFPKQVLPQPMPIKKTKPQQPV-SEPAAPEQPAPEPKHPARAPARGDSEDRRGPGQKTG 213

Query: 190 DDEAA 194
            D A+
Sbjct: 214 PDPAS 218


>gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]
          Length = 814

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 16/48 (33%), Positives = 21/48 (43%)

Query: 137 VAPSLVAPALNKPKKPLTSSSAAPQRPISTQRTAAAPKAGPGVVRKNP 184
           VAP+  AP  + P  P  ++S  P R    +R A A   G G     P
Sbjct: 472 VAPAACAPCASAPCAPAPAASGRPPRAEELERRALAGAGGVGAAGAEP 519


>gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]
          Length = 411

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 16/48 (33%), Positives = 21/48 (43%)

Query: 137 VAPSLVAPALNKPKKPLTSSSAAPQRPISTQRTAAAPKAGPGVVRKNP 184
           VAP+  AP  + P  P  ++S  P R    +R A A   G G     P
Sbjct: 69  VAPAACAPCASAPCAPAPAASGRPPRAEELERRALAGAGGVGAAGAEP 116


>gi|153070260 myristoylated alanine-rich protein kinase C substrate
           [Homo sapiens]
          Length = 332

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 9/77 (11%)

Query: 123 DYDPVAARQGQETAVAPSLVAPALNKPKKPLTSSSAAPQRPISTQR----TAAAPKAGPG 178
           D  P AA  G +  +  +  APA +K +     S AA   P + ++     AAAP+AG  
Sbjct: 44  DASPAAAESGAKEELQANGSAPAADKEEPAAAGSGAA--SPSAAEKGEPAAAAAPEAGAS 101

Query: 179 VVRKNPGVGNGDDEAAE 195
            V K       + EAAE
Sbjct: 102 PVEKE---APAEGEAAE 115


>gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens]
          Length = 1417

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 3/59 (5%)

Query: 187 GNGDDEAAELMQQVNVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDPVLQRIVDI 245
           G  +D   +L +QV+ L+   ++L+K+R+    KLR +E  C+    E D   Q+++++
Sbjct: 926 GELEDTQTKLEKQVSKLE---QELQKQRESSAEKLRKMEEKCESAAHEADLKRQKVIEL 981


>gi|157388975 coiled-coil domain containing 99 [Homo sapiens]
          Length = 605

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 17/49 (34%), Positives = 27/49 (55%)

Query: 196 LMQQVNVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDPVLQRIVD 244
           LM+QV+ LK   E+ EKE   Y+  L    +  Q+ + + D  LQ+ +D
Sbjct: 201 LMRQVDRLKEEKEEREKEAVSYYNALEKARVANQDLQVQLDQALQQALD 249


>gi|18079216 CASK interacting protein 1 [Homo sapiens]
          Length = 1431

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 13/82 (15%)

Query: 132  GQETAVAPSLVAPALNKPKKPLTSSSAAPQRPISTQRTAAAPKAGPGVVRKNPGVGNGDD 191
            G   A  PS  APAL+ P KP  +++AA          AAAP A P       G   GD 
Sbjct: 1322 GASPAKPPSPGAPALHVPAKPPRAAAAA-------AAAAAAPPAPP------EGASPGDS 1368

Query: 192  EAAELMQQVNVLKLTVEDLEKE 213
               +L +    L   ++ +E++
Sbjct: 1369 ARQKLEETSACLAAALQAVEEK 1390


>gi|122056614 LIM domain binding 3 isoform 2 [Homo sapiens]
          Length = 617

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 7/103 (6%)

Query: 83  KRMGVDKIIPV-DKLVKGKFQDNFEFVQWFKKFFDANYDGKDYDPVAARQGQETAVAPSL 141
           K + VD   PV   ++K + +   E  +W ++   +N   + +  +A   G E    P  
Sbjct: 188 KDLAVDSASPVYQAVIKSQNKPEDEADEWARR--SSNLQSRSFRILAQMTGTEFMQDPDE 245

Query: 142 VAPALNKPK----KPLTSSSAAPQRPISTQRTAAAPKAGPGVV 180
            A   ++P+     P  ++S+AP    S     AAP   P VV
Sbjct: 246 EALRRSRPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVV 288


>gi|239753405 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 219

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 12/72 (16%)

Query: 130 RQGQETAVAPSLVA-----------PALNKPKKPLTSSSAAP-QRPISTQRTAAAPKAGP 177
           RQ Q T ++ SL             P    P++ + + +  P QRP +    A A +AGP
Sbjct: 103 RQQQHTVLSQSLSPMESEGPHRRRKPGAESPRRAIEAGARPPRQRPGAGTAAARASRAGP 162

Query: 178 GVVRKNPGVGNG 189
              R+  G G G
Sbjct: 163 RASRRGRGRGRG 174


>gi|189458819 transferrin receptor [Homo sapiens]
          Length = 760

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 20/70 (28%), Positives = 30/70 (42%)

Query: 144 PALNKPKKPLTSSSAAPQRPISTQRTAAAPKAGPGVVRKNPGVGNGDDEAAELMQQVNVL 203
           P+ N  + P + SS  P  P+ T   AAA K    +    P     D     +  +   +
Sbjct: 314 PSFNHTQFPPSRSSGLPNIPVQTISRAAAEKLFGNMEGDCPSDWKTDSTCRMVTSESKNV 373

Query: 204 KLTVEDLEKE 213
           KLTV ++ KE
Sbjct: 374 KLTVSNVLKE 383


>gi|189458817 transferrin receptor [Homo sapiens]
          Length = 760

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 20/70 (28%), Positives = 30/70 (42%)

Query: 144 PALNKPKKPLTSSSAAPQRPISTQRTAAAPKAGPGVVRKNPGVGNGDDEAAELMQQVNVL 203
           P+ N  + P + SS  P  P+ T   AAA K    +    P     D     +  +   +
Sbjct: 314 PSFNHTQFPPSRSSGLPNIPVQTISRAAAEKLFGNMEGDCPSDWKTDSTCRMVTSESKNV 373

Query: 204 KLTVEDLEKE 213
           KLTV ++ KE
Sbjct: 374 KLTVSNVLKE 383


>gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta [Homo
            sapiens]
          Length = 1983

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 13/35 (37%), Positives = 22/35 (62%)

Query: 190  DDEAAELMQQVNVLKLTVEDLEKERDFYFGKLRNI 224
            +DE  EL + ++ LKLT+   EKE+     K++N+
Sbjct: 993  EDECTELKKDIDDLKLTLAKAEKEKQATENKVKNL 1027


>gi|22749459 glypican 2 [Homo sapiens]
          Length = 579

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 7/66 (10%)

Query: 120 DGKDYDPVAARQGQETAVAPSLVAPALNKPKKPLTSSSAAPQRPISTQRTAAAPKAGPGV 179
           DG+D D  A+  G     A   +A A+  P +P       P+ P   +R  +  K G G 
Sbjct: 491 DGQDADEDASGSGGGQQYADDWMAGAVAPPARP-------PRPPYPPRRDGSGGKGGGGS 543

Query: 180 VRKNPG 185
            R N G
Sbjct: 544 ARYNQG 549


>gi|42821110 hypothetical protein LOC340602 [Homo sapiens]
          Length = 503

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 4/78 (5%)

Query: 121 GKDYDPVAARQGQETAVAPSL-VAPALNKPKKPLTSSS-AAPQRPISTQRTAA--APKAG 176
           G+D  P +AR+G+++A  P+L V  A +      TS++     R  STQ+ +A  + ++ 
Sbjct: 303 GRDSAPGSARRGRDSAPGPALRVRTARSDAGHRSTSTTPGTGLRSRSTQQRSALLSRRSL 362

Query: 177 PGVVRKNPGVGNGDDEAA 194
            G   +NP  G G +  A
Sbjct: 363 SGSADENPSCGTGSERLA 380


>gi|222080058 Smith-Magenis syndrome chromosome region, candidate 7
           isoform 2 [Homo sapiens]
          Length = 465

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 7/73 (9%)

Query: 112 KKFFDANYDGKDYDPVAARQGQETAVA-------PSLVAPALNKPKKPLTSSSAAPQRPI 164
           K+F D     +D D   A   +E ++        P     AL++P  PL  SS+AP+ P 
Sbjct: 59  KRFIDRATSPRDEDDTKADSWKELSLLKATPHLQPRPPPAALSQPVLPLAPSSSAPEGPA 118

Query: 165 STQRTAAAPKAGP 177
            T        + P
Sbjct: 119 ETDPEVTPQLSSP 131


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.134    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,500,155
Number of Sequences: 37866
Number of extensions: 484131
Number of successful extensions: 2508
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 2447
Number of HSP's gapped (non-prelim): 101
length of query: 268
length of database: 18,247,518
effective HSP length: 100
effective length of query: 168
effective length of database: 14,460,918
effective search space: 2429434224
effective search space used: 2429434224
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.