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Search of human proteins with 6912414
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|6912414 hairy/enhancer-of-split related with YRPW motif 2
[Homo sapiens]
(337 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|6912414 hairy/enhancer-of-split related with YRPW motif 2 [Ho... 668 0.0
gi|105990528 hairy/enhancer-of-split related with YRPW motif 1 i... 292 3e-79
gi|105990526 hairy/enhancer-of-split related with YRPW motif 1 i... 286 1e-77
gi|7657154 hairy/enhancer-of-split related with YRPW motif-like ... 217 1e-56
gi|5031763 hairy and enhancer of split 1 [Homo sapiens] 94 1e-19
gi|10863967 hairy and enhancer of split 4 isoform 2 [Homo sapiens] 87 3e-17
gi|216548627 hairy and enhancer of split 4 isoform 1 [Homo sapiens] 84 2e-16
gi|13540521 basic helix-loop-helix domain containing, class B, 3... 70 3e-12
gi|71274142 HES/HEY-like transcription factor [Homo sapiens] 67 3e-11
gi|21361763 hairy and enhancer of split 6 isoform a [Homo sapiens] 63 3e-10
gi|218751874 hairy and enhancer of split 6 isoform b [Homo sapiens] 63 4e-10
gi|145207994 hairy and enhancer of split 7 [Homo sapiens] 62 9e-10
gi|63055047 hairy and enhancer of split homolog 2 [Homo sapiens] 61 2e-09
gi|58219048 hairy and enhancer of split 5 [Homo sapiens] 57 2e-08
gi|210031233 PR domain containing 6 [Homo sapiens] 52 8e-07
gi|4503299 basic helix-loop-helix family, member e40 [Homo sapiens] 50 2e-06
gi|66912172 hairy and enhancer of split 3 [Homo sapiens] 50 4e-06
gi|71852580 aryl hydrocarbon receptor nuclear translocator-like ... 49 5e-06
gi|42716311 aryl hydrocarbon receptor nuclear translocator-like ... 49 5e-06
gi|151301154 mucin 6, gastric [Homo sapiens] 48 1e-05
gi|71852582 aryl hydrocarbon receptor nuclear translocator-like ... 47 2e-05
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 44 2e-04
gi|31745180 aryl hydrocarbon receptor nuclear translocator-like ... 44 3e-04
gi|61966923 forkhead box B2 [Homo sapiens] 43 3e-04
gi|27894361 nuclear receptor subfamily 4, group A, member 3 isof... 43 5e-04
gi|27894359 nuclear receptor subfamily 4, group A, member 3 isof... 43 5e-04
gi|27894357 nuclear receptor subfamily 4, group A, member 3 isof... 43 5e-04
gi|27894355 nuclear receptor subfamily 4, group A, member 3 isof... 43 5e-04
gi|38201614 transcription factor-like protein 4 isoform alpha [H... 42 6e-04
gi|38201612 transcription factor-like protein 4 isoform beta [Ho... 42 6e-04
>gi|6912414 hairy/enhancer-of-split related with YRPW motif 2 [Homo
sapiens]
Length = 337
Score = 668 bits (1723), Expect = 0.0
Identities = 337/337 (100%), Positives = 337/337 (100%)
Query: 1 MKRPCEETTSESDMDETIDVGSENNYSGQSTSSVIRLNSPTTTSQIMARKKRRGIIEKRR 60
MKRPCEETTSESDMDETIDVGSENNYSGQSTSSVIRLNSPTTTSQIMARKKRRGIIEKRR
Sbjct: 1 MKRPCEETTSESDMDETIDVGSENNYSGQSTSSVIRLNSPTTTSQIMARKKRRGIIEKRR 60
Query: 61 RDRINNSLSELRRLVPTAFEKQGSAKLEKAEILQMTVDHLKMLQATGGKGYFDAHALAMD 120
RDRINNSLSELRRLVPTAFEKQGSAKLEKAEILQMTVDHLKMLQATGGKGYFDAHALAMD
Sbjct: 61 RDRINNSLSELRRLVPTAFEKQGSAKLEKAEILQMTVDHLKMLQATGGKGYFDAHALAMD 120
Query: 121 FMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHLSTCATQREAAAMTSSMAHHHHPL 180
FMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHLSTCATQREAAAMTSSMAHHHHPL
Sbjct: 121 FMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHLSTCATQREAAAMTSSMAHHHHPL 180
Query: 181 HPHHWAAAFHHLPAALLQPNGLHASESTPCRLSTTSEVPPAHGSALLTATFAHADSALRM 240
HPHHWAAAFHHLPAALLQPNGLHASESTPCRLSTTSEVPPAHGSALLTATFAHADSALRM
Sbjct: 181 HPHHWAAAFHHLPAALLQPNGLHASESTPCRLSTTSEVPPAHGSALLTATFAHADSALRM 240
Query: 241 PSTGSVAPCVPPLSTSLLSLSATVHAAAAAATAAAHSFPLSFAGAFPMLPPNAAAAVAAA 300
PSTGSVAPCVPPLSTSLLSLSATVHAAAAAATAAAHSFPLSFAGAFPMLPPNAAAAVAAA
Sbjct: 241 PSTGSVAPCVPPLSTSLLSLSATVHAAAAAATAAAHSFPLSFAGAFPMLPPNAAAAVAAA 300
Query: 301 TAISPPLSVSATSSPQQTSSGTNNKPYRPWGTEVGAF 337
TAISPPLSVSATSSPQQTSSGTNNKPYRPWGTEVGAF
Sbjct: 301 TAISPPLSVSATSSPQQTSSGTNNKPYRPWGTEVGAF 337
>gi|105990528 hairy/enhancer-of-split related with YRPW motif 1
isoform a [Homo sapiens]
Length = 304
Score = 292 bits (748), Expect = 3e-79
Identities = 182/336 (54%), Positives = 220/336 (65%), Gaps = 42/336 (12%)
Query: 6 EETTSESDMDETIDVGSENNYSGQSTSSVIRLNSPTTTSQIMARKKRRGIIEKRRRDRIN 65
E ++S+S++DETI+V E+ + SS + SPTT+SQI+ARK+RRGIIEKRRRDRIN
Sbjct: 7 EYSSSDSELDETIEVEKESADENGNLSSALGSMSPTTSSQILARKRRRGIIEKRRRDRIN 66
Query: 66 NSLSELRRLVPTAFEKQGSAKLEKAEILQMTVDHLKMLQATGGKGYFDAHALAMDFMSIG 125
NSLSELRRLVP+AFEKQGSAKLEKAEILQMTVDHLKML GGKGYFDAHALAMD+ S+G
Sbjct: 67 NSLSELRRLVPSAFEKQGSAKLEKAEILQMTVDHLKMLHTAGGKGYFDAHALAMDYRSLG 126
Query: 126 FRECLTEVARYLSSVEGLDSSDPLRVRLVSHLSTCATQREAAAMTSSMAHHHHPLHPHHW 185
FRECL EVARYLS +EGLD+SDPLRVRLVSHL+ A+QREAA+ H L W
Sbjct: 127 FRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYASQREAASGA------HAGLGHIPW 180
Query: 186 AAAFHHLP---AALLQPNGLHASESTPCRLSTTSEVPPAHGSALLTATFAHADS-ALRMP 241
F H P LL P H + T T S P H L + AH ++ ALR P
Sbjct: 181 GTVFGHHPHIAHPLLLPQNGHGNAGT-----TASPTEPHHQGRLGS---AHPEAPALRAP 232
Query: 242 STGSVAPCVPPLSTSLLSLSATVHAAAAAATAAAHSFPLSFAGAFPMLPPNAAAAVAAAT 301
+GS+ P V P+ TS LS + ++ A+ +A FP SF G+F +L PN
Sbjct: 233 PSGSLGP-VLPVVTSASKLSPPLLSSVASLSA----FPFSF-GSFHLLSPN--------- 277
Query: 302 AISPPLSVSATSSPQQTSSGTNNKPYRPWGTEVGAF 337
A+SP S+P T + KPYRPWGTE+GAF
Sbjct: 278 ALSP-------SAP--TQAANLGKPYRPWGTEIGAF 304
>gi|105990526 hairy/enhancer-of-split related with YRPW motif 1
isoform b [Homo sapiens]
Length = 308
Score = 286 bits (733), Expect = 1e-77
Identities = 182/340 (53%), Positives = 220/340 (64%), Gaps = 46/340 (13%)
Query: 6 EETTSESDMDETIDVGSENNYSGQSTSSVIRLNSPTTTSQIMARKKRRGIIEKRRRDRIN 65
E ++S+S++DETI+V E+ + SS + SPTT+SQI+ARK+RRGIIEKRRRDRIN
Sbjct: 7 EYSSSDSELDETIEVEKESADENGNLSSALGSMSPTTSSQILARKRRRGIIEKRRRDRIN 66
Query: 66 NSLSELRRLVPTAFEKQ----GSAKLEKAEILQMTVDHLKMLQATGGKGYFDAHALAMDF 121
NSLSELRRLVP+AFEKQ GSAKLEKAEILQMTVDHLKML GGKGYFDAHALAMD+
Sbjct: 67 NSLSELRRLVPSAFEKQVMEQGSAKLEKAEILQMTVDHLKMLHTAGGKGYFDAHALAMDY 126
Query: 122 MSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHLSTCATQREAAAMTSSMAHHHHPLH 181
S+GFRECL EVARYLS +EGLD+SDPLRVRLVSHL+ A+QREAA+ H L
Sbjct: 127 RSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYASQREAASGA------HAGLG 180
Query: 182 PHHWAAAFHHLP---AALLQPNGLHASESTPCRLSTTSEVPPAHGSALLTATFAHADS-A 237
W F H P LL P H + T T S P H L + AH ++ A
Sbjct: 181 HIPWGTVFGHHPHIAHPLLLPQNGHGNAGT-----TASPTEPHHQGRLGS---AHPEAPA 232
Query: 238 LRMPSTGSVAPCVPPLSTSLLSLSATVHAAAAAATAAAHSFPLSFAGAFPMLPPNAAAAV 297
LR P +GS+ P V P+ TS LS + ++ A+ +A FP SF G+F +L PN
Sbjct: 233 LRAPPSGSLGP-VLPVVTSASKLSPPLLSSVASLSA----FPFSF-GSFHLLSPN----- 281
Query: 298 AAATAISPPLSVSATSSPQQTSSGTNNKPYRPWGTEVGAF 337
A+SP S+P T + KPYRPWGTE+GAF
Sbjct: 282 ----ALSP-------SAP--TQAANLGKPYRPWGTEIGAF 308
>gi|7657154 hairy/enhancer-of-split related with YRPW motif-like
[Homo sapiens]
Length = 328
Score = 217 bits (552), Expect = 1e-56
Identities = 158/348 (45%), Positives = 195/348 (56%), Gaps = 31/348 (8%)
Query: 1 MKRPCEETTSESDMDETIDVGSENNYSGQSTSSVIRLNSPTTTSQIMARKKRRGIIEKRR 60
MKRP E + S+ + D IDVG E GQ + L++P++ SQ+ ARKKRRGIIEKRR
Sbjct: 1 MKRPKEPSGSDGESDGPIDVGQE----GQLSQMARPLSTPSS-SQMQARKKRRGIIEKRR 55
Query: 61 RDRINNSLSELRRLVPTAFEKQGSAKLEKAEILQMTVDHLKMLQATGGKGYFDAHALAMD 120
RDRIN+SLSELRRLVPTAFEKQGS+KLEKAE+LQMTVDHLKML ATGG G+FDA ALA+D
Sbjct: 56 RDRINSSLSELRRLVPTAFEKQGSSKLEKAEVLQMTVDHLKMLHATGGTGFFDARALAVD 115
Query: 121 FMSIGFRECLTEVARYLSSVEGLDS-SDPLRVRLVSHLSTCATQREAAAMTSSMAHHHHP 179
F SIGFRECLTEV RYL +EG S +DP+R+RL+SHL++ A + E + + P
Sbjct: 116 FRSIGFRECLTEVIRYLGVLEGPSSRADPVRIRLLSHLNSYAAEMEPSPTPTG------P 169
Query: 180 LHPHHWA-AAFHHLPAALLQPNGLHASESTPCRLSTTSEVPPAHGSALLTATFAHADSAL 238
L W + FH P N L P + P AL TA A + +
Sbjct: 170 LAFPAWPWSFFHSCPGLPALSNQLAILGRVPSPVLPGVSSPAYPIPALRTAPLRRA-TGI 228
Query: 239 RMPSTGSVAPCVPPLSTSL---LSLSATVHAAAAAATAA--AHSFP-LSFAGAFPMLPPN 292
+P+ +V P ST L AT A ++ AA +H P L + P P
Sbjct: 229 ILPARRNVLPSRGASSTRRARPLERPATPVPVAPSSRAARSSHIAPLLQSSSPTPPGPTG 288
Query: 293 AAAAVAAATAISPPLSVSATSSPQQTSSGTNNKPYRPWG---TEVGAF 337
+AA VA T S SSP Y W TE+GAF
Sbjct: 289 SAAYVAVPTPNS--------SSPGPAGRPAGAMLYHSWVSEITEIGAF 328
>gi|5031763 hairy and enhancer of split 1 [Homo sapiens]
Length = 280
Score = 94.4 bits (233), Expect = 1e-19
Identities = 94/301 (31%), Positives = 123/301 (40%), Gaps = 56/301 (18%)
Query: 38 NSPTTTSQIMARKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQM 95
+ P T S+ RK + I+EKRRR RIN SLS+L+ L+ A +K S +KLEKA+IL+M
Sbjct: 26 DKPKTASE--HRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEM 83
Query: 96 TVDHLKMLQATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVS 155
TV HL+ LQ + GF EC+ EV R+LS+ EG+++ +R RL+
Sbjct: 84 TVKHLRNLQRAQMTAALSTDPSVLGKYRAGFSECMNEVTRFLSTCEGVNTE--VRTRLLG 141
Query: 156 HLSTCATQREAAAMTSSMAHHHHPLHPHHWAAAFHHLPAALLQPNGLHASESTPCRLSTT 215
HL+ C TQ A +P PH PA L
Sbjct: 142 HLANCMTQINAMT---------YPGQPH---------PA-----------------LQAP 166
Query: 216 SEVPPAHGSALLTATFAHADSALRMPSTGSVAPCVPPLSTSLLSLSATVHAAAAAATAAA 275
PP G HA A P PP + L + A AA
Sbjct: 167 PPPPPGPGGP------QHAPFAPPPPLVPIPGGAAPPPGGAPCKLGS--QAGEAAKVFGG 218
Query: 276 HSFPLSFAGAFPMLPPNAAAAVAAATAISPPLSVSATS------SPQQTSSGTNNKPYRP 329
+ G F L PN A A + I S S TS SP S T + +RP
Sbjct: 219 FQVVPAPDGQFAFLIPNGAFA-HSGPVIPVYTSNSGTSVGPNAVSPSSGPSLTADSMWRP 277
Query: 330 W 330
W
Sbjct: 278 W 278
>gi|10863967 hairy and enhancer of split 4 isoform 2 [Homo sapiens]
Length = 221
Score = 86.7 bits (213), Expect = 3e-17
Identities = 50/128 (39%), Positives = 75/128 (58%), Gaps = 4/128 (3%)
Query: 49 RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKMLQAT 106
RK + ++EKRRR RIN SL++L+ L+ A K+ S +KLEKA+IL+MTV HL+ L+
Sbjct: 35 RKSSKPVMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSLRRV 94
Query: 107 GGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHLSTCATQREA 166
A + GF ECL EV R+L+ EG+ + +R RL+ HL+ C Q
Sbjct: 95 QVTAALSADPAVLGKYRAGFHECLAEVNRFLAGCEGVPAD--VRSRLLGHLAACLRQLGP 152
Query: 167 AAMTSSMA 174
+ +S++
Sbjct: 153 SRRPASLS 160
>gi|216548627 hairy and enhancer of split 4 isoform 1 [Homo sapiens]
Length = 247
Score = 83.6 bits (205), Expect = 2e-16
Identities = 49/134 (36%), Positives = 76/134 (56%), Gaps = 4/134 (2%)
Query: 43 TSQIMARKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHL 100
T + + + ++EKRRR RIN SL++L+ L+ A K+ S +KLEKA+IL+MTV HL
Sbjct: 55 TQPVPDPQSSKPVMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHL 114
Query: 101 KMLQATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHLSTC 160
+ L+ A + GF ECL EV R+L+ EG+ + +R RL+ HL+ C
Sbjct: 115 RSLRRVQVTAALSADPAVLGKYRAGFHECLAEVNRFLAGCEGVPAD--VRSRLLGHLAAC 172
Query: 161 ATQREAAAMTSSMA 174
Q + +S++
Sbjct: 173 LRQLGPSRRPASLS 186
>gi|13540521 basic helix-loop-helix domain containing, class B, 3
[Homo sapiens]
Length = 482
Score = 70.1 bits (170), Expect = 3e-12
Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 13/122 (10%)
Query: 55 IIEKRRRDRINNSLSELRRLVPTAFEKQGSAKLEKAEILQMTVDHLKMLQATGGKGYFDA 114
+IEK+RRDRIN +++L+ L+P + LEKA +L++T+ HLK L A + +
Sbjct: 51 LIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLKALTALTEQQHQKI 110
Query: 115 HALA-------------MDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHLSTCA 161
AL +D GF+ C EV +YLS E +P V+L++HL A
Sbjct: 111 IALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLSRFESWTPREPRCVQLINHLHAVA 170
Query: 162 TQ 163
TQ
Sbjct: 171 TQ 172
Score = 31.2 bits (69), Expect = 1.4
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 252 PLSTSLLSLSATVHAAAAAATAAAHSFPLSFAGAFPMLPPNAAAAVAAATAISPPLSVSA 311
PL + A AAAAAA AAA +FP + + PP A AAAT + ++
Sbjct: 386 PLLYPGIPAPAAAAAAAAAAAAAAAAFPCL---SSVLSPPPEKAGAAAATLLPHEVAPLG 442
Query: 312 TSSPQQTSSGTN 323
PQ T+
Sbjct: 443 APHPQHPHGRTH 454
Score = 30.4 bits (67), Expect = 2.3
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 241 PSTGSVAPCVPPLSTSLLSLSATVHAAAAAATAAAHSFPLSFAGAFPMLPPN-------- 292
P+ + C+P S + +A V + + +P + A FP+L P
Sbjct: 340 PAAAAAPFCLPFCFLSPSAAAAYVQPFLDKSGLEKYLYPAAAAAPFPLLYPGIPAPAAAA 399
Query: 293 AAAAVAAATAISPPLSVSATSSPQQ 317
AAAA AAA A + P S S P +
Sbjct: 400 AAAAAAAAAAAAFPCLSSVLSPPPE 424
>gi|71274142 HES/HEY-like transcription factor [Homo sapiens]
Length = 327
Score = 66.6 bits (161), Expect = 3e-11
Identities = 49/151 (32%), Positives = 70/151 (46%), Gaps = 44/151 (29%)
Query: 55 IIEKRRRDRINNSLSELRRLVPTAFEKQG------------------------------- 83
+IEKRRRDRIN L+EL + VP A KQG
Sbjct: 61 VIEKRRRDRINRCLNELGKTVPMALAKQGEPQEALAQIRSRVRSLVLSSATVPDQQALGR 120
Query: 84 ----------SAKLEKAEILQMTVDHLKML-QATGGKGYFDAHALA--MDFMSIGFRECL 130
S KLEKAEIL+MTV +L+ L A +G A LA ++ G+ EC+
Sbjct: 121 CEGPFLLLQSSGKLEKAEILEMTVQYLRALHSADFPRGREKAELLAEFANYFHYGYHECM 180
Query: 131 TEVARYLSSVEGLDSSDPLRVRLVSHLSTCA 161
+ YL++VE +++ D R+++ L + A
Sbjct: 181 KNLVHYLTTVERMETKDTKYARILAFLQSKA 211
>gi|21361763 hairy and enhancer of split 6 isoform a [Homo sapiens]
Length = 224
Score = 63.2 bits (152), Expect = 3e-10
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 5/120 (4%)
Query: 49 RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGSAKLEKAEILQMTVDHLKMLQATGG 108
RK R+ ++EK+RR RIN SL ELR L+ A + AKLE AE+L++TV ++ +
Sbjct: 26 RKARKPLVEKKRRARINESLQELRLLLAGA---EVQAKLENAEVLELTVRRVQGVLRGRA 82
Query: 109 KGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHLSTCATQREAAA 168
+ A A + + G+ +C+ EV ++S+ + +D++ + L++HL RE ++
Sbjct: 83 REREQLQAEASERFAAGYIQCMHEVHTFVSTCQAIDAT--VAAELLNHLLESMPLREGSS 140
>gi|218751874 hairy and enhancer of split 6 isoform b [Homo sapiens]
Length = 222
Score = 62.8 bits (151), Expect = 4e-10
Identities = 39/120 (32%), Positives = 68/120 (56%), Gaps = 7/120 (5%)
Query: 49 RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGSAKLEKAEILQMTVDHLKMLQATGG 108
RK R+ ++EK+RR RIN SL ELR L+ A AKLE AE+L++TV ++ +
Sbjct: 26 RKARKPLVEKKRRARINESLQELRLLLAGA-----EAKLENAEVLELTVRRVQGVLRGRA 80
Query: 109 KGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHLSTCATQREAAA 168
+ A A + + G+ +C+ EV ++S+ + +D++ + L++HL RE ++
Sbjct: 81 REREQLQAEASERFAAGYIQCMHEVHTFVSTCQAIDAT--VAAELLNHLLESMPLREGSS 138
>gi|145207994 hairy and enhancer of split 7 [Homo sapiens]
Length = 225
Score = 61.6 bits (148), Expect = 9e-10
Identities = 47/115 (40%), Positives = 62/115 (53%), Gaps = 13/115 (11%)
Query: 50 KKRRGIIEKRRRDRINNSLSELRRLV--PTAFEKQGSAKLEKAEILQMTVDHLKMLQATG 107
K + ++EKRRRDRIN SL ELR L+ T + + KLEKAEIL+ V +L+
Sbjct: 14 KMLKPLVEKRRRDRINRSLEELRLLLLERTRDQNLRNPKLEKAEILEFAVGYLRERSRVE 73
Query: 108 GKG-----YFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHL 157
G DA ALA ++S GFRECL +A + D+S R +L S L
Sbjct: 74 PPGVPRSPVQDAEALASCYLS-GFRECLLRLAAFAH-----DASPAARAQLFSAL 122
>gi|63055047 hairy and enhancer of split homolog 2 [Homo sapiens]
Length = 173
Score = 60.8 bits (146), Expect = 2e-09
Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 7/111 (6%)
Query: 49 RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKMLQAT 106
RK + ++EKRRR RIN SLS+L+ L+ ++ S +KLEKA++L+MTV L+ L A+
Sbjct: 14 RKSLKPLLEKRRRARINQSLSQLKGLILPLLGRENSNCSKLEKADVLEMTVRFLQELPAS 73
Query: 107 GGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHL 157
+ A L D G+ C+ +AR L + L+ + + RL+ HL
Sbjct: 74 ---SWPTAAPLPCDSYREGYSACVARLARVLPACRVLEPA--VSARLLEHL 119
>gi|58219048 hairy and enhancer of split 5 [Homo sapiens]
Length = 166
Score = 57.4 bits (137), Expect = 2e-08
Identities = 39/110 (35%), Positives = 66/110 (60%), Gaps = 16/110 (14%)
Query: 52 RRGIIEKRRRDRINNSLSELRRLVPTAFEK-QGSAKLEKAEILQMTVDHLK----MLQAT 106
R+ ++EK RRDRIN+S+ +L+ L+ F + Q ++KLEKA+IL+M V +LK + A
Sbjct: 20 RKPVVEKMRRDRINSSIEQLKLLLEQEFARHQPNSKLEKADILEMAVSYLKHSKAFVAAA 79
Query: 107 GGKGYFDAHALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSH 156
G K +L D+ S G+ CL E ++L+ L ++ +++L+ H
Sbjct: 80 GPK------SLHQDY-SEGYSWCLQEAVQFLT----LHAASDTQMKLLYH 118
>gi|210031233 PR domain containing 6 [Homo sapiens]
Length = 595
Score = 52.0 bits (123), Expect = 8e-07
Identities = 48/144 (33%), Positives = 59/144 (40%), Gaps = 10/144 (6%)
Query: 179 PLHPHHWAAAFHHLPAALLQPNGLHASESTPCRLSTTSEVPPAHGSALLTATFAHADSAL 238
P + HW F H A L+ +G S P L PP + DS
Sbjct: 17 PAYLQHWQQLFPHGGAGPLKGSGAAGLLSAPQPLQPPPPPPPPERAE------PPPDSLR 70
Query: 239 RMPSTGSVAPCVPPLS-TSLLSLSATVHAAAAAATAAAHSFPLSFAGAFPMLPPNAAAAV 297
P++ S A P S TS S S+ AAAAAA A + P+S P+ P AAAAV
Sbjct: 71 PRPASLSSASSTPASSSTSASSASSCAAAAAAAALAGLSALPVS---QLPVFAPLAAAAV 127
Query: 298 AAATAISPPLSVSATSSPQQTSSG 321
AA L + ATS P G
Sbjct: 128 AAEPLPPKELCLGATSGPGPVKCG 151
>gi|4503299 basic helix-loop-helix family, member e40 [Homo sapiens]
Length = 412
Score = 50.4 bits (119), Expect = 2e-06
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 18/119 (15%)
Query: 55 IIEKRRRDRINNSLSELRRLVPTAFEKQGSAKLEKAEILQMTVDHLKMLQATGGKGYFDA 114
+IEK+RRDRIN +++L+ L+P + LEKA +L++T+ H+K L +
Sbjct: 59 LIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLIDQQQQKI 118
Query: 115 HAL----------------AMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHL 157
AL + GF+ C EV +YL+ E ++ D +LV+HL
Sbjct: 119 IALQSGLQAGELSGRNVETGQEMFCSGFQTCAREVLQYLAKHE--NTRDLKSSQLVTHL 175
>gi|66912172 hairy and enhancer of split 3 [Homo sapiens]
Length = 186
Score = 49.7 bits (117), Expect = 4e-06
Identities = 54/169 (31%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 56 IEKRRRDRINNSLSELRRLVPTAFEKQ-GSAKLEKAEILQMTVDHLKMLQATGGKGYFDA 114
+EK+RR RIN SL +L+ L+ + Q KLEKA+IL+++V +++ LQ +G +
Sbjct: 1 MEKKRRARINVSLEQLKSLLEKHYSHQIRKRKLEKADILELSVKYMRSLQ-NSLQGLWPV 59
Query: 115 HALAMDFMSIGFRECLTEVARYLSSVEGLDSSDPLRVRLVSHLSTCATQREAAAMTSSMA 174
A GFR CL V++ L G + LR LV S + ++A +
Sbjct: 60 PRGAE--QPSGFRSCLPGVSQLLR--RGDEVGSGLRCPLVPE-SAAGSTMDSAGLGQEAP 114
Query: 175 HHHHPLHPHHWAAAFHHLPAA---LLQPNGLHASESTPCRLSTTSEVPP 220
P P WA A PAA P L ES P +++ VPP
Sbjct: 115 ALFRPCTPAVWAPA----PAAGGPRSPPPLLLLPESLP---GSSASVPP 156
>gi|71852580 aryl hydrocarbon receptor nuclear translocator-like
isoform a [Homo sapiens]
Length = 625
Score = 49.3 bits (116), Expect = 5e-06
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 10 SESDMDETIDVGSENNYSGQSTSSVIRLNSPTTTSQIMARKKRRGIIEKRRRDRINNSLS 69
S +D E++D ++ + RL +I ++ IEKRRRD++N+ +
Sbjct: 42 SSTDYQESMDTDKDDPHG--------RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFID 93
Query: 70 ELRRLVPTAFEKQGSAKLEKAEILQMTVDHLKMLQ 104
EL LVPT S KL+K +L+M V H+K L+
Sbjct: 94 ELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLR 126
>gi|42716311 aryl hydrocarbon receptor nuclear translocator-like
isoform a [Homo sapiens]
Length = 625
Score = 49.3 bits (116), Expect = 5e-06
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 10 SESDMDETIDVGSENNYSGQSTSSVIRLNSPTTTSQIMARKKRRGIIEKRRRDRINNSLS 69
S +D E++D ++ + RL +I ++ IEKRRRD++N+ +
Sbjct: 42 SSTDYQESMDTDKDDPHG--------RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFID 93
Query: 70 ELRRLVPTAFEKQGSAKLEKAEILQMTVDHLKMLQ 104
EL LVPT S KL+K +L+M V H+K L+
Sbjct: 94 ELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLR 126
>gi|151301154 mucin 6, gastric [Homo sapiens]
Length = 2439
Score = 47.8 bits (112), Expect = 1e-05
Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 26/148 (17%)
Query: 198 QPNGLHASESTPCRLST---------TSEVPPAHGSAL-----LTATFAHADSALRMPS- 242
QP A+E+T R +T T+ PP GS + +TAT HA + PS
Sbjct: 1379 QPTRPTATETTQTRTTTEYTTPQTPHTTHSPPTAGSPVPSTGPVTATSFHATTTYPTPSH 1438
Query: 243 -TGSVAPCVPPLSTSLLSLSA----TVHAAAAAATAAAHSFPLSFAGAFPMLPPNAAAAV 297
++ VPP STSL++ S T A A +A+ HS P +PP
Sbjct: 1439 PETTLPTHVPPFSTSLVTPSTHTVITPTHAQMATSASNHSAPTG------TIPPPTTLKA 1492
Query: 298 AAATAISPPLSVSATSSPQQTSSGTNNK 325
+T +PP++ + + + Q SS + NK
Sbjct: 1493 TGSTHTAPPITPTTSGTSQAHSSFSTNK 1520
Score = 38.9 bits (89), Expect = 0.007
Identities = 51/189 (26%), Positives = 73/189 (38%), Gaps = 41/189 (21%)
Query: 155 SHLSTCATQREAAAMTSSMAHHHHP---------LHPHHWAAAFHHLPAALLQPNGLHAS 205
S ST T TSS HHP + P H + P A H +
Sbjct: 1907 SSFSTAKTSTSLPYHTSST---HHPEVTPTSTTNITPKHTSTGTR-TPVA-------HTT 1955
Query: 206 ESTPCRLST--TSEVPPAHGSAL-----LTATFAHADSALRMPS--TGSVAPCVPPLSTS 256
++ RL T T+ PP S +TAT + PS ++ VPP STS
Sbjct: 1956 SASSSRLPTPFTTHSPPTGSSPFSSTGPMTATSFQTTTTYPTPSHPQTTLPTHVPPFSTS 2015
Query: 257 LLSLSA-----TVHAAAAAATAAAHSFPLSFAGAFPMLPPNAAAAVAAATAISPPLSVSA 311
L++ S T H A + A+ HS P +PP +T +PP++V+
Sbjct: 2016 LVTPSTHTVIITTHTQMATS-ASIHSTPTG------TVPPPTTLKATGSTHTAPPMTVTT 2068
Query: 312 TSSPQQTSS 320
+ + Q SS
Sbjct: 2069 SGTSQTHSS 2077
Score = 35.4 bits (80), Expect = 0.073
Identities = 44/190 (23%), Positives = 76/190 (40%), Gaps = 36/190 (18%)
Query: 158 STCATQREAAAMTSSMAHHHHP---------LHPHHWAAAFHHLPAALLQPNGLHASEST 208
S+ +T + + ++ S + HHP + P+H + P A H + +T
Sbjct: 1738 SSFSTAKTSTSLHSHTSSTHHPEVTSTSTTSITPNHTSTGTR-TPVA-------HTTSAT 1789
Query: 209 PCRLST--TSEVPPAHGSAL-----LTATFAHADSALRMPSTG--SVAPCVPPLSTSLLS 259
RL T T+ PP + + +TAT + PS ++ VP STSL++
Sbjct: 1790 SSRLPTPFTTHSPPTGTTPISSTGPVTATSFQTTTTYPTPSHPHTTLPTHVPSFSTSLVT 1849
Query: 260 LSATVHAAAA----AATAAAHSFPLSFAGAFPMLPPNAAAAVAAATAISPPLSVSATSSP 315
S A +A+ HS P +PP +T +PP++ + + +
Sbjct: 1850 PSTHTVIIPTHTQMATSASIHSMPTG------TIPPPTTIKATGSTHTAPPMTPTTSGTS 1903
Query: 316 QQTSSGTNNK 325
Q SS + K
Sbjct: 1904 QSPSSFSTAK 1913
>gi|71852582 aryl hydrocarbon receptor nuclear translocator-like
isoform b [Homo sapiens]
Length = 582
Score = 47.0 bits (110), Expect = 2e-05
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 36 RLNSPTTTSQIMARKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGSAKLEKAEILQM 95
RL +I ++ IEKRRRD++N+ + EL LVPT S KL+K +L+M
Sbjct: 17 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTC--NAMSRKLDKLTVLRM 74
Query: 96 TVDHLKMLQ 104
V H+K L+
Sbjct: 75 AVQHMKTLR 83
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 44.3 bits (103), Expect = 2e-04
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 33/168 (19%)
Query: 192 LPAALLQPNGLHASESTP----------CRLSTTSEVPPAHGSALLTATFAHADSALRMP 241
+PA+ L P + AS S P S ++ VP + +A +T++ A A + P
Sbjct: 1785 VPASTLAP--VLASTSAPVPASPLAPVSASASVSASVPASTSAAAITSSSAPASAPAPTP 1842
Query: 242 STGSVAP----------CVPPLSTSLLSLSATVHAAAAAATAAAHSFPLSFAGAFPMLPP 291
SV+ +P L+++L S SA A AA++ AA P+ A P P
Sbjct: 1843 ILASVSTPASVTILASASIPILASALASTSAPTPAPAASSPAA----PVITAPTIPASAP 1898
Query: 292 NAAAAVAAATAISP---PLSVSATS----SPQQTSSGTNNKPYRPWGT 332
A+ +A A+A +P P VSA + +P QT + T+ P T
Sbjct: 1899 TASVPLAPASASAPAPAPTPVSAPNPAPPAPAQTQAQTHKPVQNPLQT 1946
Score = 31.6 bits (70), Expect = 1.1
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 214 TTSEVPPAHGSALLTATFAHADSALRMPSTGSVAPCVPPLSTSLLSLSATVHAAAAAATA 273
+++ VPP + L +T A ++ P ++ P P STS ++T+ A+ +A
Sbjct: 1742 SSASVPPLASAPLPPSTSASVPASTSAPLPATLTPV--PASTSAPVPASTLAPVLASTSA 1799
Query: 274 AAHSFPLSFAGAFPMLPPNAAAAVAAA--TAISPPLSVSA 311
+ PL+ A + + A+ +AA T+ S P S A
Sbjct: 1800 PVPASPLAPVSASASVSASVPASTSAAAITSSSAPASAPA 1839
>gi|31745180 aryl hydrocarbon receptor nuclear translocator-like 2
[Homo sapiens]
Length = 636
Score = 43.5 bits (101), Expect = 3e-04
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 30 STSSVIRLNSPTTTSQIMARKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGSAKLEK 89
S SS R+ ++ A ++ EKRRRD++NN + EL ++P + KL+K
Sbjct: 89 SASSGSRVEDGEHQVKMKAFREAHSQTEKRRRDKMNNLIEELSAMIPQC--NPMARKLDK 146
Query: 90 AEILQMTVDHLKMLQ 104
+L+M V HL+ L+
Sbjct: 147 LTVLRMAVQHLRSLK 161
>gi|61966923 forkhead box B2 [Homo sapiens]
Length = 432
Score = 43.1 bits (100), Expect = 3e-04
Identities = 46/147 (31%), Positives = 54/147 (36%), Gaps = 44/147 (29%)
Query: 175 HHHHPLHPHHWAAAFHH----------LPAALLQPNGLHASESTPCRLSTTSEVPPAHGS 224
HHHHP H HH AA HH P P+ +H P T+ PP H
Sbjct: 140 HHHHPHHHHHHHAAAHHHHHHHPPQPPPPPPPPPPHMVHYFHQQP----PTAPQPPPH-- 193
Query: 225 ALLTATFAHADSALRMPSTGSVAP-----CVPPLSTSLLSLSATVHAAAAAATAAAHSFP 279
+PS P P + +A V AAAAAA AAA
Sbjct: 194 ---------------LPSQPPQQPPQQSQPQQPSHPGKMQEAAAVAAAAAAAAAAA---- 234
Query: 280 LSFAGAFPMLPP----NAAAAVAAATA 302
+ G PP +AAAA AAA A
Sbjct: 235 VGSVGRLSQFPPYGLGSAAAAAAAAAA 261
>gi|27894361 nuclear receptor subfamily 4, group A, member 3 isoform
b [Homo sapiens]
Length = 637
Score = 42.7 bits (99), Expect = 5e-04
Identities = 59/224 (26%), Positives = 77/224 (34%), Gaps = 23/224 (10%)
Query: 113 DAHALAMDFMSIGFRECLTEVARYLSS-VEGLDSSDPLRVRLVSHLSTCATQREAAAMTS 171
D L MD S T +S+ VEG S+ L+ V + + E S
Sbjct: 45 DYTKLTMDLGSTEITATATTSLPSISTFVEGYSSNYELKPSCVYQMQRPLIKVEEGRAPS 104
Query: 172 SMAHHHHPLHPHHWAAAFHHLPAALLQPNGLHASESTPCRLSTTSEVPPAHGSALLTATF 231
HHHH H HH H P+ + P E P + PP S T F
Sbjct: 105 YHHHHHHHHHHHHHHQQQHQQPS--IPPASSPEDEVLPSTSMYFKQSPP---STPTTPAF 159
Query: 232 AHADSALRMPSTGSVAPCVPPLSTSLLSLSATVHAAAAAATAAAHSFPLSFAGAFPMLPP 291
AL + S C+ P LL A T A FPL P PP
Sbjct: 160 PPQAGALWDEALPSAPGCIAP--GPLLD-----PPMKAVPTVAGARFPLFHFKPSPPHPP 212
Query: 292 NAAAA--------VAAATAISPPLSVSATSSPQQTSSGTNNKPY 327
+ A AA A+S PL +A + Q ++ + PY
Sbjct: 213 APSPAGGHHLGYDPTAAAALSLPLGAAAAAGSQ--AAALESHPY 254
>gi|27894359 nuclear receptor subfamily 4, group A, member 3 isoform
c [Homo sapiens]
Length = 443
Score = 42.7 bits (99), Expect = 5e-04
Identities = 59/224 (26%), Positives = 77/224 (34%), Gaps = 23/224 (10%)
Query: 113 DAHALAMDFMSIGFRECLTEVARYLSS-VEGLDSSDPLRVRLVSHLSTCATQREAAAMTS 171
D L MD S T +S+ VEG S+ L+ V + + E S
Sbjct: 34 DYTKLTMDLGSTEITATATTSLPSISTFVEGYSSNYELKPSCVYQMQRPLIKVEEGRAPS 93
Query: 172 SMAHHHHPLHPHHWAAAFHHLPAALLQPNGLHASESTPCRLSTTSEVPPAHGSALLTATF 231
HHHH H HH H P+ + P E P + PP S T F
Sbjct: 94 YHHHHHHHHHHHHHHQQQHQQPS--IPPASSPEDEVLPSTSMYFKQSPP---STPTTPAF 148
Query: 232 AHADSALRMPSTGSVAPCVPPLSTSLLSLSATVHAAAAAATAAAHSFPLSFAGAFPMLPP 291
AL + S C+ P LL A T A FPL P PP
Sbjct: 149 PPQAGALWDEALPSAPGCIAP--GPLLD-----PPMKAVPTVAGARFPLFHFKPSPPHPP 201
Query: 292 NAAAA--------VAAATAISPPLSVSATSSPQQTSSGTNNKPY 327
+ A AA A+S PL +A + Q ++ + PY
Sbjct: 202 APSPAGGHHLGYDPTAAAALSLPLGAAAAAGSQ--AAALESHPY 243
>gi|27894357 nuclear receptor subfamily 4, group A, member 3 isoform
a [Homo sapiens]
Length = 626
Score = 42.7 bits (99), Expect = 5e-04
Identities = 59/224 (26%), Positives = 77/224 (34%), Gaps = 23/224 (10%)
Query: 113 DAHALAMDFMSIGFRECLTEVARYLSS-VEGLDSSDPLRVRLVSHLSTCATQREAAAMTS 171
D L MD S T +S+ VEG S+ L+ V + + E S
Sbjct: 34 DYTKLTMDLGSTEITATATTSLPSISTFVEGYSSNYELKPSCVYQMQRPLIKVEEGRAPS 93
Query: 172 SMAHHHHPLHPHHWAAAFHHLPAALLQPNGLHASESTPCRLSTTSEVPPAHGSALLTATF 231
HHHH H HH H P+ + P E P + PP S T F
Sbjct: 94 YHHHHHHHHHHHHHHQQQHQQPS--IPPASSPEDEVLPSTSMYFKQSPP---STPTTPAF 148
Query: 232 AHADSALRMPSTGSVAPCVPPLSTSLLSLSATVHAAAAAATAAAHSFPLSFAGAFPMLPP 291
AL + S C+ P LL A T A FPL P PP
Sbjct: 149 PPQAGALWDEALPSAPGCIAP--GPLLD-----PPMKAVPTVAGARFPLFHFKPSPPHPP 201
Query: 292 NAAAA--------VAAATAISPPLSVSATSSPQQTSSGTNNKPY 327
+ A AA A+S PL +A + Q ++ + PY
Sbjct: 202 APSPAGGHHLGYDPTAAAALSLPLGAAAAAGSQ--AAALESHPY 243
>gi|27894355 nuclear receptor subfamily 4, group A, member 3 isoform
a [Homo sapiens]
Length = 626
Score = 42.7 bits (99), Expect = 5e-04
Identities = 59/224 (26%), Positives = 77/224 (34%), Gaps = 23/224 (10%)
Query: 113 DAHALAMDFMSIGFRECLTEVARYLSS-VEGLDSSDPLRVRLVSHLSTCATQREAAAMTS 171
D L MD S T +S+ VEG S+ L+ V + + E S
Sbjct: 34 DYTKLTMDLGSTEITATATTSLPSISTFVEGYSSNYELKPSCVYQMQRPLIKVEEGRAPS 93
Query: 172 SMAHHHHPLHPHHWAAAFHHLPAALLQPNGLHASESTPCRLSTTSEVPPAHGSALLTATF 231
HHHH H HH H P+ + P E P + PP S T F
Sbjct: 94 YHHHHHHHHHHHHHHQQQHQQPS--IPPASSPEDEVLPSTSMYFKQSPP---STPTTPAF 148
Query: 232 AHADSALRMPSTGSVAPCVPPLSTSLLSLSATVHAAAAAATAAAHSFPLSFAGAFPMLPP 291
AL + S C+ P LL A T A FPL P PP
Sbjct: 149 PPQAGALWDEALPSAPGCIAP--GPLLD-----PPMKAVPTVAGARFPLFHFKPSPPHPP 201
Query: 292 NAAAA--------VAAATAISPPLSVSATSSPQQTSSGTNNKPY 327
+ A AA A+S PL +A + Q ++ + PY
Sbjct: 202 APSPAGGHHLGYDPTAAAALSLPLGAAAAAGSQ--AAALESHPY 243
>gi|38201614 transcription factor-like protein 4 isoform alpha [Homo
sapiens]
Length = 214
Score = 42.4 bits (98), Expect = 6e-04
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 49 RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQ---GSAKLEKAEILQMTVDHLKMLQA 105
R++ E++RRD I +L+ +VPT ++ GS KL KA +LQ T+D+++ L
Sbjct: 46 RRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHK 105
Query: 106 TGGKGYFDAHALAMDFMSI 124
K + L D ++
Sbjct: 106 EKKKQEEEVSTLRKDVTAL 124
>gi|38201612 transcription factor-like protein 4 isoform beta [Homo
sapiens]
Length = 244
Score = 42.4 bits (98), Expect = 6e-04
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 49 RKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQ---GSAKLEKAEILQMTVDHLKMLQA 105
R++ E++RRD I +L+ +VPT ++ GS KL KA +LQ T+D+++ L
Sbjct: 76 RRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLHK 135
Query: 106 TGGKGYFDAHALAMDFMSI 124
K + L D ++
Sbjct: 136 EKKKQEEEVSTLRKDVTAL 154
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.124 0.359
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,241,114
Number of Sequences: 37866
Number of extensions: 514364
Number of successful extensions: 4877
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 280
Number of HSP's that attempted gapping in prelim test: 3775
Number of HSP's gapped (non-prelim): 912
length of query: 337
length of database: 18,247,518
effective HSP length: 103
effective length of query: 234
effective length of database: 14,347,320
effective search space: 3357272880
effective search space used: 3357272880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.