Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 68161520
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|68161520 cyclic AMP-regulated phosphoprotein, 21 kD isoform
2 [Homo sapiens]
(89 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38261965 cyclic AMP-regulated phosphoprotein, 21 kD isoform 2... 173 2e-44
gi|68161522 cyclic AMP-regulated phosphoprotein, 21 kD isoform 2... 173 2e-44
gi|68161520 cyclic AMP-regulated phosphoprotein, 21 kD isoform 2... 173 2e-44
gi|38261971 cyclic AMP-regulated phosphoprotein, 21 kD isoform 1... 170 3e-43
gi|31543535 R3H domain containing 1 [Homo sapiens] 42 8e-05
gi|162951884 R3H domain containing 2 [Homo sapiens] 42 1e-04
gi|148746183 ubiquitin specific protease 35 [Homo sapiens] 34 0.028
gi|78000158 eukaryotic translation initiation factor 2B, subunit... 32 0.082
gi|66792814 retrotransposon gag domain containing 4 [Homo sapiens] 32 0.14
gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens] 31 0.18
gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens] 31 0.18
gi|78000156 eukaryotic translation initiation factor 2B, subunit... 31 0.24
gi|121114306 neurogenic differentiation 1 [Homo sapiens] 30 0.31
gi|4507711 tetratricopeptide repeat domain 1 [Homo sapiens] 30 0.31
gi|56549694 enabled homolog isoform a [Homo sapiens] 30 0.53
gi|39930375 enabled homolog isoform b [Homo sapiens] 30 0.53
gi|55741661 hypothetical protein LOC57653 [Homo sapiens] 30 0.53
gi|19923830 pre-B-cell leukemia homeobox interacting protein 1 [... 30 0.53
gi|221219020 NYD-SP11 protein [Homo sapiens] 29 0.69
gi|4503257 death-domain associated protein isoform a [Homo sapiens] 29 0.69
gi|215422388 death-domain associated protein isoform a [Homo sap... 29 0.69
gi|215422366 death-domain associated protein isoform b [Homo sap... 29 0.69
gi|169161767 PREDICTED: hypothetical protein [Homo sapiens] 29 0.69
gi|169161534 PREDICTED: hypothetical protein [Homo sapiens] 29 0.69
gi|169162811 PREDICTED: hypothetical protein [Homo sapiens] 29 0.69
gi|190341068 forkhead-associated (FHA) phosphopeptide binding do... 29 0.69
gi|7705431 coiled-coil domain containing 72 [Homo sapiens] 29 0.69
gi|222136684 prickle homolog 1 [Homo sapiens] 29 0.91
gi|222136682 prickle homolog 1 [Homo sapiens] 29 0.91
gi|222136680 prickle homolog 1 [Homo sapiens] 29 0.91
>gi|38261965 cyclic AMP-regulated phosphoprotein, 21 kD isoform 2
[Homo sapiens]
Length = 89
Score = 173 bits (439), Expect = 2e-44
Identities = 89/89 (100%), Positives = 89/89 (100%)
Query: 1 MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGA 60
MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGA
Sbjct: 1 MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGA 60
Query: 61 GKGKLTRSLAVCEESSARPGGESLQDQTL 89
GKGKLTRSLAVCEESSARPGGESLQDQTL
Sbjct: 61 GKGKLTRSLAVCEESSARPGGESLQDQTL 89
>gi|68161522 cyclic AMP-regulated phosphoprotein, 21 kD isoform 2
[Homo sapiens]
Length = 89
Score = 173 bits (439), Expect = 2e-44
Identities = 89/89 (100%), Positives = 89/89 (100%)
Query: 1 MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGA 60
MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGA
Sbjct: 1 MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGA 60
Query: 61 GKGKLTRSLAVCEESSARPGGESLQDQTL 89
GKGKLTRSLAVCEESSARPGGESLQDQTL
Sbjct: 61 GKGKLTRSLAVCEESSARPGGESLQDQTL 89
>gi|68161520 cyclic AMP-regulated phosphoprotein, 21 kD isoform 2
[Homo sapiens]
Length = 89
Score = 173 bits (439), Expect = 2e-44
Identities = 89/89 (100%), Positives = 89/89 (100%)
Query: 1 MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGA 60
MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGA
Sbjct: 1 MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGA 60
Query: 61 GKGKLTRSLAVCEESSARPGGESLQDQTL 89
GKGKLTRSLAVCEESSARPGGESLQDQTL
Sbjct: 61 GKGKLTRSLAVCEESSARPGGESLQDQTL 89
>gi|38261971 cyclic AMP-regulated phosphoprotein, 21 kD isoform 1
[Homo sapiens]
Length = 812
Score = 170 bits (430), Expect = 3e-43
Identities = 87/87 (100%), Positives = 87/87 (100%)
Query: 1 MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGA 60
MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGA
Sbjct: 1 MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGA 60
Query: 61 GKGKLTRSLAVCEESSARPGGESLQDQ 87
GKGKLTRSLAVCEESSARPGGESLQDQ
Sbjct: 61 GKGKLTRSLAVCEESSARPGGESLQDQ 87
>gi|31543535 R3H domain containing 1 [Homo sapiens]
Length = 1099
Score = 42.4 bits (98), Expect = 8e-05
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 12/78 (15%)
Query: 19 QETATPENGIVKSESLDE----------EEKLELQRRLEAQNQERRKSKSGAGKGKLTRS 68
++T EN ++KSE+ + E ++LQR L++ Q ++SKS + K KL RS
Sbjct: 24 KDTTRVEN-LIKSENYGKILVEKNEHCIENNIDLQRPLQSFGQTGKRSKSSS-KLKLVRS 81
Query: 69 LAVCEESSARPGGESLQD 86
LAVCEES P E Q+
Sbjct: 82 LAVCEESPPPPAPEISQE 99
>gi|162951884 R3H domain containing 2 [Homo sapiens]
Length = 976
Score = 41.6 bits (96), Expect = 1e-04
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 23 TPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGAGKGKLTRSLAVCEESSARPGGE 82
TP ++ E D + E QRR R+++KS + K KL RSLAVCEESS
Sbjct: 35 TPSKEEIEKECEDTSLRQETQRRTSNHGHARKRAKSNS-KLKLVRSLAVCEESSTPFADG 93
Query: 83 SLQDQTL 89
L+ Q +
Sbjct: 94 PLETQDI 100
>gi|148746183 ubiquitin specific protease 35 [Homo sapiens]
Length = 1018
Score = 33.9 bits (76), Expect = 0.028
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 3 EQGDLNQAIAEEGGTEQETATPENGIVKSESL-DEEEKLELQRRLEAQNQERRKSKSGAG 61
E+G + EE G E+E+ E K E + +EEEK+E + EA+ QE+ + GAG
Sbjct: 681 EEGKEERTEKEEVGEEEESTRGEGEREKEEEVEEEEEKVEKETEKEAE-QEKEEDSLGAG 739
>gi|78000158 eukaryotic translation initiation factor 2B, subunit
4 delta isoform 2 [Homo sapiens]
Length = 523
Score = 32.3 bits (72), Expect = 0.082
Identities = 18/74 (24%), Positives = 34/74 (45%)
Query: 10 AIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGAGKGKLTRSL 69
A+ E+ G+ + P + +EEKL+L++ + Q ++R++ K + S
Sbjct: 7 AVREDSGSGMKAELPPGPGAVGREMTKEEKLQLRKEKKQQKKKRKEEKGAEPETGSAVSA 66
Query: 70 AVCEESSARPGGES 83
A C+ R ES
Sbjct: 67 AQCQVGPTRELPES 80
>gi|66792814 retrotransposon gag domain containing 4 [Homo sapiens]
Length = 569
Score = 31.6 bits (70), Expect = 0.14
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 18 EQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGAGKGKLTRSLAVCEESSA 77
E+E E + K E +EEE+ E++++ E + + + G K + E+
Sbjct: 377 EEEEMKKEEEMKKKEEKEEEEEEEMKQKEEEEEIRNKNEEEGESKDEEDED----EDGGQ 432
Query: 78 RPGGESLQD 86
+P GE QD
Sbjct: 433 KPEGEPQQD 441
>gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens]
Length = 888
Score = 31.2 bits (69), Expect = 0.18
Identities = 16/64 (25%), Positives = 31/64 (48%)
Query: 14 EGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGAGKGKLTRSLAVCE 73
+ E+E + E ++K E +EEE E R+ + + +E+ K K + + + A
Sbjct: 82 KNSAEEEVLSSEKQLIKMEKKEEEENGERPRKKKEKEKEKEKEKEKEKEREKEKEKATVS 141
Query: 74 ESSA 77
E+ A
Sbjct: 142 ENVA 145
>gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens]
Length = 948
Score = 31.2 bits (69), Expect = 0.18
Identities = 16/64 (25%), Positives = 31/64 (48%)
Query: 14 EGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGAGKGKLTRSLAVCE 73
+ E+E + E ++K E +EEE E R+ + + +E+ K K + + + A
Sbjct: 82 KNSAEEEVLSSEKQLIKMEKKEEEENGERPRKKKEKEKEKEKEKEKEKEREKEKEKATVS 141
Query: 74 ESSA 77
E+ A
Sbjct: 142 ENVA 145
>gi|78000156 eukaryotic translation initiation factor 2B, subunit
4 delta isoform 3 [Homo sapiens]
Length = 522
Score = 30.8 bits (68), Expect = 0.24
Identities = 15/64 (23%), Positives = 31/64 (48%)
Query: 10 AIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGAGKGKLTRSL 69
A+ E+ G+ + P + +EEKL+L++ + Q ++R++ K + S
Sbjct: 7 AVREDSGSGMKAELPPGPGAVGREMTKEEKLQLRKEKKQQKKKRKEEKGAEPETGSAVSA 66
Query: 70 AVCE 73
A C+
Sbjct: 67 AQCQ 70
>gi|121114306 neurogenic differentiation 1 [Homo sapiens]
Length = 356
Score = 30.4 bits (67), Expect = 0.31
Identities = 17/68 (25%), Positives = 35/68 (51%)
Query: 1 MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGA 60
+S Q + ++A +E E A ++ E DE+E LE + E ++ +++ + G
Sbjct: 27 LSSQDEEHEADKKEDDLEAMNAEEDSLRNGGEEEDEDEDLEEEEEEEEEDDDQKPKRRGP 86
Query: 61 GKGKLTRS 68
K K+T++
Sbjct: 87 KKKKMTKA 94
>gi|4507711 tetratricopeptide repeat domain 1 [Homo sapiens]
Length = 292
Score = 30.4 bits (67), Expect = 0.31
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 6 DLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKS 58
D + + EE G ++ N V S LDEE +EL++ + + +++R+ +S
Sbjct: 65 DCSASFEEEPGADK-VENKSNEDVNSSELDEEYLIELEKNMSDEEKQKRREES 116
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 29.6 bits (65), Expect = 0.53
Identities = 12/38 (31%), Positives = 24/38 (63%)
Query: 18 EQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRK 55
E++ + + + E L+ +E+LE Q RL+ + QER++
Sbjct: 194 ERQERERQERLERQERLERQERLERQERLDRERQERQE 231
Score = 26.9 bits (58), Expect = 3.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 30 KSESLDEEEKLELQRRLEAQNQERRKSKSGAGKGKLTR 67
+ E L+ +E+LE Q RLE Q + R+ + + +L R
Sbjct: 200 RQERLERQERLERQERLERQERLDRERQERQERERLER 237
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 29.6 bits (65), Expect = 0.53
Identities = 12/38 (31%), Positives = 24/38 (63%)
Query: 18 EQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRK 55
E++ + + + E L+ +E+LE Q RL+ + QER++
Sbjct: 194 ERQERERQERLERQERLERQERLERQERLDRERQERQE 231
Score = 26.9 bits (58), Expect = 3.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 30 KSESLDEEEKLELQRRLEAQNQERRKSKSGAGKGKLTR 67
+ E L+ +E+LE Q RLE Q + R+ + + +L R
Sbjct: 200 RQERLERQERLERQERLERQERLDRERQERQERERLER 237
>gi|55741661 hypothetical protein LOC57653 [Homo sapiens]
Length = 1646
Score = 29.6 bits (65), Expect = 0.53
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 12/84 (14%)
Query: 1 MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGA 60
+ +G LN ++ EE Q E SE DE+E+ E + +LE + +E+ +
Sbjct: 881 VEREGSLNPSLNEENVKGQGEKKEE-----SEEEDEKEEEEEEEKLEEEKEEKEAQEE-- 933
Query: 61 GKGKLTRSLAVCEESSARPGGESL 84
SL+V EE G E +
Sbjct: 934 -----QESLSVGEEEDKEEGLEEI 952
>gi|19923830 pre-B-cell leukemia homeobox interacting protein 1
[Homo sapiens]
Length = 731
Score = 29.6 bits (65), Expect = 0.53
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 10/66 (15%)
Query: 4 QGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGAGKG 63
QGD +AI E+G EQE PE +K ++E+LE + + Q ER++ G+ +
Sbjct: 361 QGD--KAIREQGPREQE---PELSFLK-----QKEQLEAEAQALRQELERQRRLLGSVQQ 410
Query: 64 KLTRSL 69
L RSL
Sbjct: 411 DLERSL 416
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 29.3 bits (64), Expect = 0.69
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 13 EEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGAGKGKLTRSLAVC 72
EE E+E E + + E +EE+ ++++E + +E++K K K ++ V
Sbjct: 2247 EEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVF 2306
Query: 73 EESS---ARPGGESLQDQ 87
EE + ESL D+
Sbjct: 2307 EEKEEIMSEEETESLSDE 2324
>gi|4503257 death-domain associated protein isoform a [Homo sapiens]
Length = 740
Score = 29.3 bits (64), Expect = 0.69
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 13 EEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGAGKG---KLTRSL 69
EE E+E E ++S +EE+ ++Q E +E + ++ AGK SL
Sbjct: 441 EESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSL 500
Query: 70 AVCEESSARPG 80
+ E + PG
Sbjct: 501 QISNEKNLEPG 511
>gi|215422388 death-domain associated protein isoform a [Homo
sapiens]
Length = 740
Score = 29.3 bits (64), Expect = 0.69
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 13 EEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGAGKG---KLTRSL 69
EE E+E E ++S +EE+ ++Q E +E + ++ AGK SL
Sbjct: 441 EESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSL 500
Query: 70 AVCEESSARPG 80
+ E + PG
Sbjct: 501 QISNEKNLEPG 511
>gi|215422366 death-domain associated protein isoform b [Homo
sapiens]
Length = 752
Score = 29.3 bits (64), Expect = 0.69
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 13 EEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGAGKG---KLTRSL 69
EE E+E E ++S +EE+ ++Q E +E + ++ AGK SL
Sbjct: 453 EESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSL 512
Query: 70 AVCEESSARPG 80
+ E + PG
Sbjct: 513 QISNEKNLEPG 523
>gi|169161767 PREDICTED: hypothetical protein [Homo sapiens]
Length = 70
Score = 29.3 bits (64), Expect = 0.69
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 14 EGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGAGKGKL 65
EGG ++ P+ +++ +DEE+K Q++ E Q + AGKG L
Sbjct: 5 EGGKKKPPKQPKK---QAKEMDEEDKAFKQKQKEEQKKLEELKAKAAGKGPL 53
>gi|169161534 PREDICTED: hypothetical protein [Homo sapiens]
Length = 70
Score = 29.3 bits (64), Expect = 0.69
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 14 EGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGAGKGKL 65
EGG ++ P+ +++ +DEE+K Q++ E Q + AGKG L
Sbjct: 5 EGGKKKPPKQPKK---QAKEMDEEDKAFKQKQKEEQKKLEELKAKAAGKGPL 53
>gi|169162811 PREDICTED: hypothetical protein [Homo sapiens]
Length = 70
Score = 29.3 bits (64), Expect = 0.69
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 14 EGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGAGKGKL 65
EGG ++ P+ +++ +DEE+K Q++ E Q + AGKG L
Sbjct: 5 EGGKKKPPKQPKK---QAKEMDEEDKAFKQKQKEEQKKLEELKAKAAGKGPL 53
>gi|190341068 forkhead-associated (FHA) phosphopeptide binding
domain 1 [Homo sapiens]
Length = 1412
Score = 29.3 bits (64), Expect = 0.69
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 32 ESLDEEEKL--ELQRRLEAQNQER--RKSKSGAGKGKLTRSLAVCEESSARPGGESLQDQ 87
E++++E+K +L+ RL Q +E ++ K KL+ +LA+ EE+ ESL+ +
Sbjct: 811 EAMEKEKKKVQDLENRLTKQKEELELKEQKEDVLNNKLSDALAMVEETQKTKATESLKAE 870
Query: 88 TL 89
+L
Sbjct: 871 SL 872
>gi|7705431 coiled-coil domain containing 72 [Homo sapiens]
Length = 64
Score = 29.3 bits (64), Expect = 0.69
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 14 EGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGAGKGKL 65
EGG ++ P+ +++ +DEE+K Q++ E Q + AGKG L
Sbjct: 5 EGGKKKPLKQPKK---QAKEMDEEDKAFKQKQKEEQKKLEELKAKAAGKGPL 53
>gi|222136684 prickle homolog 1 [Homo sapiens]
Length = 831
Score = 28.9 bits (63), Expect = 0.91
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 25 ENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGAGKGK-LTRSL--AVCEESSARPGG 81
+N + +SL EEEK ELQ + +R+K G G K L+R++ AVCE+ + G
Sbjct: 80 DNEVRYCQSLSEEEKKELQ----VFSAQRKKEALGRGTIKLLSRAVMHAVCEQCGLKING 135
>gi|222136682 prickle homolog 1 [Homo sapiens]
Length = 831
Score = 28.9 bits (63), Expect = 0.91
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 25 ENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGAGKGK-LTRSL--AVCEESSARPGG 81
+N + +SL EEEK ELQ + +R+K G G K L+R++ AVCE+ + G
Sbjct: 80 DNEVRYCQSLSEEEKKELQ----VFSAQRKKEALGRGTIKLLSRAVMHAVCEQCGLKING 135
>gi|222136680 prickle homolog 1 [Homo sapiens]
Length = 831
Score = 28.9 bits (63), Expect = 0.91
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 25 ENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGAGKGK-LTRSL--AVCEESSARPGG 81
+N + +SL EEEK ELQ + +R+K G G K L+R++ AVCE+ + G
Sbjct: 80 DNEVRYCQSLSEEEKKELQ----VFSAQRKKEALGRGTIKLLSRAVMHAVCEQCGLKING 135
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.298 0.119 0.301
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,562,787
Number of Sequences: 37866
Number of extensions: 142681
Number of successful extensions: 940
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 799
Number of HSP's gapped (non-prelim): 196
length of query: 89
length of database: 18,247,518
effective HSP length: 61
effective length of query: 28
effective length of database: 15,937,692
effective search space: 446255376
effective search space used: 446255376
T: 11
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.