Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ARPP-21 Sequence: fasta or formatted (89aa) NCBI GI: 68161522
Description:

cyclic AMP-regulated phosphoprotein, 21 kD isoform 2

Not currently referenced in the text

Other entries for this name:
alt mRNA {89aa} cyclic AMP-regulated phosphoprotein, 21 kD isoform 2
alt prot {812aa} cyclic AMP-regulated phosphoprotein, 21 kD isoform 1
alt mRNA {89aa} cyclic AMP-regulated phosphoprotein, 21 kD isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9          7           1
 C cysteine            1.1          1           1
 D aspartate           3.4          3           1
 E glutamate          18.0         16           3
 F phenylalanine       0.0          0           0
 G glycine            10.1          9           2
 H histidine           0.0          0           0
 I isoleucine          2.2          2           1
 K lysine              6.7          6           1
 L leucine            10.1          9           1
 M methionine          1.1          1           1
 N asparagine          3.4          3           1
 P proline             2.2          2           1
 Q glutamine           9.0          8           1
 R arginine            6.7          6           2
 S serine             10.1          9           2
 T threonine           5.6          5           1
 V valine              2.2          2           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cyclic AMP-regulated phosphoprotein, 21 kD isoform 2... 
ARPP-21               1.000   cyclic AMP-regulated phosphoprotein, 21 kD isoform 2...
ARPP-21               1.000   cyclic AMP-regulated phosphoprotein, 21 kD isoform 2...
ARPP-21               0.980   cyclic AMP-regulated phosphoprotein, 21 kD isoform 1...
R3HDM1                0.115   R3H domain containing 1 
R3HDM2                0.115   R3H domain containing 2 
USP35                 0.061   ubiquitin specific protease 35 
EIF2B4                0.047   eukaryotic translation initiation factor 2B, subunit...
RGAG4                 0.047   retrotransposon gag domain containing 4 
PHF14                 0.041   PHD finger protein 14 isoform 2 
PHF14                 0.041   PHD finger protein 14 isoform 1 
EIF2B4                0.041   eukaryotic translation initiation factor 2B, subunit...
NEUROD1               0.034   neurogenic differentiation 1 
TTC1                  0.034   tetratricopeptide repeat domain 1 
ENAH                  0.034   enabled homolog isoform a 
ENAH                  0.034   enabled homolog isoform b 
KIAA1529              0.034   hypothetical protein LOC57653 
PBXIP1                0.034   pre-B-cell leukemia homeobox interacting protein 1 [...
WDR87                 0.027   NYD-SP11 protein 
DAXX                  0.027   death-domain associated protein isoform a 
DAXX                  0.027   death-domain associated protein isoform a 
DAXX                  0.027   death-domain associated protein isoform b 
LOC729973             0.027   PREDICTED: hypothetical protein 
LOC729973             0.027   PREDICTED: hypothetical protein 
LOC729973             0.027   PREDICTED: hypothetical protein 
FHAD1                 0.027   forkhead-associated (FHA) phosphopeptide binding do...
CCDC72                0.027   coiled-coil domain containing 72 
PRICKLE1              0.027   prickle homolog 1 
PRICKLE1              0.027   prickle homolog 1 
PRICKLE1              0.027   prickle homolog 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press