Guide to the Human Genome
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Name: BAG5 Sequence: fasta or formatted (447aa) NCBI GI: 6631077
Description:

BCL2-associated athanogene 5 isoform b

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Other entries for this name:
alt mRNA [447aa] BCL2-associated athanogene 5 isoform b
alt prot [488aa] BCL2-associated athanogene 5 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         27           2
 C cysteine            2.2         10           1
 D aspartate           5.6         25           2
 E glutamate          11.0         49           3
 F phenylalanine       2.0          9           1
 G glycine             4.5         20           2
 H histidine           2.2         10           1
 I isoleucine          7.4         33           2
 K lysine              8.3         37           2
 L leucine            12.3         55           2
 M methionine          1.3          6           1
 N asparagine          5.1         23           3
 P proline             2.2         10           1
 Q glutamine           5.8         26           2
 R arginine            6.3         28           3
 S serine              5.1         23           2
 T threonine           3.8         17           2
 V valine              6.0         27           2
 W tryptophan          0.4          2           1
 Y tyrosine            2.2         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BCL2-associated athanogene 5 isoform b 
BAG5                  1.000   BCL2-associated athanogene 5 isoform a 
BAG5                  1.000   BCL2-associated athanogene 5 isoform b 
BAG3                  0.056   BCL2-associated athanogene 3 
BAG4                  0.047   BCL2-associated athanogene 4 
KTN1                  0.020   kinectin 1 isoform b 
CIT                   0.018   citron 
LOC653125             0.016   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728498             0.016   PREDICTED: similar to Golgin subfamily A member 8-l...
KTN1                  0.016   kinectin 1 isoform a 
KTN1                  0.016   kinectin 1 isoform a 
LOC653073             0.016   PREDICTED: Golgin subfamily A member 8-like protein...
EEA1                  0.015   early endosome antigen 1, 162kD 
CENPE                 0.014   centromere protein E 
ZW10                  0.014   centromere/kinetochore protein zw10 
CCDC88A               0.014   coiled-coil domain containing 88A isoform 1 
LOC653125             0.014   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728498             0.014   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653720             0.014   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.013   PREDICTED: Golgin subfamily A member 8-like protein...
C10orf118             0.012   CTCL tumor antigen L14-2 
CCDC88A               0.012   coiled-coil domain containing 88A isoform 2 
CCDC18                0.012   sarcoma antigen NY-SAR-41 
C10orf96              0.012   hypothetical protein LOC374355 
GOLGA3                0.012   Golgi autoantigen, golgin subfamily a, 3 
LOC390638             0.011   PREDICTED: similar to hCG32587 
LOC653720             0.011   PREDICTED: similar to Golgin subfamily A member 8-l...
MYO18B                0.011   myosin XVIIIB 
C13orf38              0.011   hypothetical protein LOC728591 isoform a 
MYH9                  0.009   myosin, heavy polypeptide 9, non-muscle 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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