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Search of human proteins with 63999355
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|63999355 chromosome 9 open reading frame 37 [Homo sapiens]
(176 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|63999355 chromosome 9 open reading frame 37 [Homo sapiens] 370 e-103
gi|28212280 hypothetical protein LOC283579 [Homo sapiens] 61 4e-10
gi|194473995 zinc finger protein 195 isoform 2 [Homo sapiens] 60 1e-09
gi|194473688 zinc finger protein 195 isoform 1 [Homo sapiens] 57 1e-08
gi|62243734 signal transducing adaptor family member 2 isoform 1... 55 2e-08
gi|237858668 hypothetical protein LOC123207 isoform d [Homo sapi... 49 2e-06
gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens] 49 3e-06
gi|169213800 PREDICTED: hypothetical protein [Homo sapiens] 49 3e-06
gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens] 49 3e-06
gi|169214229 PREDICTED: hypothetical protein [Homo sapiens] 49 3e-06
gi|169213573 PREDICTED: hypothetical protein [Homo sapiens] 49 3e-06
gi|54112407 protein kinase CHK2 isoform c [Homo sapiens] 48 4e-06
gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo ... 47 7e-06
gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens] 47 7e-06
gi|33188429 tetratricopeptide repeat protein isoform 1 [Homo sap... 47 9e-06
gi|224494572 hypothetical protein LOC401082 [Homo sapiens] 45 2e-05
gi|29029530 sulfotransferase family, cytosolic, 1C, member 1 iso... 44 7e-05
gi|211971058 G protein-coupled receptor 107 isoform 1 [Homo sapi... 44 7e-05
gi|61744477 solute carrier family 3, member 2 isoform b [Homo sa... 43 1e-04
gi|61744475 solute carrier family 3, member 2 isoform a [Homo sa... 43 1e-04
gi|195963398 suppressor of G2 allele of SKP1 isoform a [Homo sap... 43 1e-04
gi|57529246 ubiquitin thioesterase 19 [Homo sapiens] 43 2e-04
gi|119964690 glycogenin 2 isoform b [Homo sapiens] 43 2e-04
gi|239751420 PREDICTED: similar to hCG2039376 [Homo sapiens] 42 3e-04
gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1 [... 42 4e-04
gi|169213867 PREDICTED: hypothetical protein LOC100128682 [Homo ... 41 5e-04
gi|169214305 PREDICTED: hypothetical protein LOC100128682 [Homo ... 41 5e-04
gi|169213267 PREDICTED: hypothetical protein LOC100128682 [Homo ... 41 5e-04
gi|66277202 podocalyxin-like isoform 1 precursor [Homo sapiens] 41 6e-04
gi|4506473 v-rel reticuloendotheliosis viral oncogene homolog [H... 39 0.002
>gi|63999355 chromosome 9 open reading frame 37 [Homo sapiens]
Length = 176
Score = 370 bits (949), Expect = e-103
Identities = 176/176 (100%), Positives = 176/176 (100%)
Query: 1 MEFHYVAQADLELLTSSNPPASASQSTGITGGSHRARPGPVHFIDKVTDKPSHSHPFALK 60
MEFHYVAQADLELLTSSNPPASASQSTGITGGSHRARPGPVHFIDKVTDKPSHSHPFALK
Sbjct: 1 MEFHYVAQADLELLTSSNPPASASQSTGITGGSHRARPGPVHFIDKVTDKPSHSHPFALK 60
Query: 61 ENWNLNPEPSSPPSPLFLEAPSRQASQHHGASPGAGTSAGCPFEKCCSTEPCLSGLGDVG 120
ENWNLNPEPSSPPSPLFLEAPSRQASQHHGASPGAGTSAGCPFEKCCSTEPCLSGLGDVG
Sbjct: 61 ENWNLNPEPSSPPSPLFLEAPSRQASQHHGASPGAGTSAGCPFEKCCSTEPCLSGLGDVG 120
Query: 121 RGEAASLRARPGSGASRGQGPGSRVSCRRDLGKPLHAPAGFSAGEVHTTPLGNLGA 176
RGEAASLRARPGSGASRGQGPGSRVSCRRDLGKPLHAPAGFSAGEVHTTPLGNLGA
Sbjct: 121 RGEAASLRARPGSGASRGQGPGSRVSCRRDLGKPLHAPAGFSAGEVHTTPLGNLGA 176
>gi|28212280 hypothetical protein LOC283579 [Homo sapiens]
Length = 122
Score = 61.2 bits (147), Expect = 4e-10
Identities = 47/99 (47%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 1 MEFHYVAQADLELLTSSNPPASASQSTGITGGSHRARPGP---VHFIDKVTDKPSHSHPF 57
M HY AQA LELL SSNPPASASQS GITG SH ARPG H + +V D H
Sbjct: 31 MGSHYFAQAGLELLGSSNPPASASQSAGITGVSHCARPGEHDLNHTVFQVKDSTFLRH-- 88
Query: 58 ALKENWNLNPEPSSPPSPLFLEAPSRQASQHHGASPGAG 96
L+ + PE S P F E PS S G G
Sbjct: 89 -LESD---RPEFKSCLPPHFTE-PSVSLSTSEGCEDAMG 122
>gi|194473995 zinc finger protein 195 isoform 2 [Homo sapiens]
Length = 606
Score = 59.7 bits (143), Expect = 1e-09
Identities = 32/53 (60%), Positives = 37/53 (69%)
Query: 1 MEFHYVAQADLELLTSSNPPASASQSTGITGGSHRARPGPVHFIDKVTDKPSH 53
M FH+ QA LELL SS+ PASASQS GITG +HRA+PG +DK T SH
Sbjct: 77 MGFHHATQACLELLGSSDLPASASQSAGITGVNHRAQPGLNVSVDKFTAMSSH 129
>gi|194473688 zinc finger protein 195 isoform 1 [Homo sapiens]
Length = 629
Score = 56.6 bits (135), Expect = 1e-08
Identities = 30/48 (62%), Positives = 35/48 (72%)
Query: 1 MEFHYVAQADLELLTSSNPPASASQSTGITGGSHRARPGPVHFIDKVT 48
M FH+ QA LELL SS+ PASASQS GITG +HRA+PG +DK T
Sbjct: 77 MGFHHATQACLELLGSSDLPASASQSAGITGVNHRAQPGLNVSVDKFT 124
>gi|62243734 signal transducing adaptor family member 2 isoform 1
[Homo sapiens]
Length = 449
Score = 55.5 bits (132), Expect = 2e-08
Identities = 27/36 (75%), Positives = 29/36 (80%)
Query: 3 FHYVAQADLELLTSSNPPASASQSTGITGGSHRARP 38
FH+VAQA LELLTSS+PP SASQS GITG SH P
Sbjct: 362 FHHVAQAGLELLTSSDPPTSASQSAGITGVSHHTWP 397
>gi|237858668 hypothetical protein LOC123207 isoform d [Homo
sapiens]
Length = 167
Score = 48.9 bits (115), Expect = 2e-06
Identities = 24/34 (70%), Positives = 27/34 (79%)
Query: 5 YVAQADLELLTSSNPPASASQSTGITGGSHRARP 38
Y+AQA LELL SS+ PASASQS GITG SH +P
Sbjct: 127 YIAQAGLELLASSDLPASASQSAGITGVSHHTQP 160
>gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 48.5 bits (114), Expect = 3e-06
Identities = 25/36 (69%), Positives = 27/36 (75%)
Query: 3 FHYVAQADLELLTSSNPPASASQSTGITGGSHRARP 38
F +V QA LELL S +PP SASQS GITG SH ARP
Sbjct: 358 FLHVDQAGLELLISGDPPTSASQSAGITGVSHWARP 393
>gi|169213800 PREDICTED: hypothetical protein [Homo sapiens]
Length = 142
Score = 48.5 bits (114), Expect = 3e-06
Identities = 24/37 (64%), Positives = 29/37 (78%)
Query: 1 MEFHYVAQADLELLTSSNPPASASQSTGITGGSHRAR 37
M ++V QA LELLTSS+PP SASQ+ ITG SHRA+
Sbjct: 1 MGLYHVGQAGLELLTSSDPPTSASQNAEITGVSHRAQ 37
>gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 48.5 bits (114), Expect = 3e-06
Identities = 25/36 (69%), Positives = 27/36 (75%)
Query: 3 FHYVAQADLELLTSSNPPASASQSTGITGGSHRARP 38
F +V QA LELL S +PP SASQS GITG SH ARP
Sbjct: 358 FLHVDQAGLELLISGDPPTSASQSAGITGVSHWARP 393
>gi|169214229 PREDICTED: hypothetical protein [Homo sapiens]
Length = 142
Score = 48.5 bits (114), Expect = 3e-06
Identities = 24/37 (64%), Positives = 29/37 (78%)
Query: 1 MEFHYVAQADLELLTSSNPPASASQSTGITGGSHRAR 37
M ++V QA LELLTSS+PP SASQ+ ITG SHRA+
Sbjct: 1 MGLYHVGQAGLELLTSSDPPTSASQNAEITGVSHRAQ 37
>gi|169213573 PREDICTED: hypothetical protein [Homo sapiens]
Length = 142
Score = 48.5 bits (114), Expect = 3e-06
Identities = 24/37 (64%), Positives = 29/37 (78%)
Query: 1 MEFHYVAQADLELLTSSNPPASASQSTGITGGSHRAR 37
M ++V QA LELLTSS+PP SASQ+ ITG SHRA+
Sbjct: 1 MGLYHVGQAGLELLTSSDPPTSASQNAEITGVSHRAQ 37
>gi|54112407 protein kinase CHK2 isoform c [Homo sapiens]
Length = 586
Score = 48.1 bits (113), Expect = 4e-06
Identities = 24/37 (64%), Positives = 27/37 (72%)
Query: 2 EFHYVAQADLELLTSSNPPASASQSTGITGGSHRARP 38
E +V Q+DLELL SS+PPASASQS GI G H RP
Sbjct: 109 ESGHVTQSDLELLLSSDPPASASQSAGIRGVRHHPRP 145
>gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo
sapiens]
Length = 402
Score = 47.4 bits (111), Expect = 7e-06
Identities = 24/36 (66%), Positives = 27/36 (75%)
Query: 3 FHYVAQADLELLTSSNPPASASQSTGITGGSHRARP 38
F +V QA LELL S +PP SASQS GITG +H ARP
Sbjct: 358 FLHVDQAGLELLISGDPPTSASQSAGITGVTHWARP 393
>gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 47.4 bits (111), Expect = 7e-06
Identities = 24/36 (66%), Positives = 27/36 (75%)
Query: 3 FHYVAQADLELLTSSNPPASASQSTGITGGSHRARP 38
F +V QA LELL S +PP SASQS GITG +H ARP
Sbjct: 358 FLHVDQAGLELLISGDPPTSASQSAGITGVTHWARP 393
>gi|33188429 tetratricopeptide repeat protein isoform 1 [Homo sapiens]
Length = 1079
Score = 47.0 bits (110), Expect = 9e-06
Identities = 25/35 (71%), Positives = 26/35 (74%)
Query: 3 FHYVAQADLELLTSSNPPASASQSTGITGGSHRAR 37
FH+V QA LELLTS ASASQS GITG SH AR
Sbjct: 1045 FHHVGQACLELLTSGGLLASASQSAGITGVSHHAR 1079
>gi|224494572 hypothetical protein LOC401082 [Homo sapiens]
Length = 95
Score = 45.4 bits (106), Expect = 2e-05
Identities = 24/39 (61%), Positives = 25/39 (64%)
Query: 4 HYVAQADLELLTSSNPPASASQSTGITGGSHRARPGPVH 42
HYVAQA LELL SSN P SA Q+ G TG H P VH
Sbjct: 18 HYVAQAGLELLGSSNSPTSAYQAAGTTGLHHCTPPIQVH 56
>gi|29029530 sulfotransferase family, cytosolic, 1C, member 1
isoform b [Homo sapiens]
Length = 307
Score = 43.9 bits (102), Expect = 7e-05
Identities = 21/28 (75%), Positives = 24/28 (85%)
Query: 3 FHYVAQADLELLTSSNPPASASQSTGIT 30
FH+VAQA L+LL+SSNPPAS SQS IT
Sbjct: 96 FHHVAQAGLKLLSSSNPPASTSQSAKIT 123
>gi|211971058 G protein-coupled receptor 107 isoform 1 [Homo
sapiens]
Length = 600
Score = 43.9 bits (102), Expect = 7e-05
Identities = 22/37 (59%), Positives = 26/37 (70%)
Query: 1 MEFHYVAQADLELLTSSNPPASASQSTGITGGSHRAR 37
+E H+ AQADLELL SS PPAS SQ GIT + A+
Sbjct: 454 IESHHFAQADLELLASSCPPASVSQRAGITAAINLAK 490
>gi|61744477 solute carrier family 3, member 2 isoform b [Homo
sapiens]
Length = 631
Score = 43.1 bits (100), Expect = 1e-04
Identities = 20/29 (68%), Positives = 24/29 (82%)
Query: 3 FHYVAQADLELLTSSNPPASASQSTGITG 31
FH+V+QAD+E LTS +P ASAS S GITG
Sbjct: 73 FHHVSQADIEFLTSIDPTASASGSAGITG 101
>gi|61744475 solute carrier family 3, member 2 isoform a [Homo
sapiens]
Length = 661
Score = 43.1 bits (100), Expect = 1e-04
Identities = 20/29 (68%), Positives = 24/29 (82%)
Query: 3 FHYVAQADLELLTSSNPPASASQSTGITG 31
FH+V+QAD+E LTS +P ASAS S GITG
Sbjct: 103 FHHVSQADIEFLTSIDPTASASGSAGITG 131
Score = 28.1 bits (61), Expect = 4.1
Identities = 14/23 (60%), Positives = 16/23 (69%)
Query: 4 HYVAQADLELLTSSNPPASASQS 26
H VAQ LELL S +P SASQ+
Sbjct: 42 HCVAQTGLELLASGDPLPSASQN 64
>gi|195963398 suppressor of G2 allele of SKP1 isoform a [Homo
sapiens]
Length = 365
Score = 43.1 bits (100), Expect = 1e-04
Identities = 21/29 (72%), Positives = 23/29 (79%)
Query: 3 FHYVAQADLELLTSSNPPASASQSTGITG 31
FH V QA L+LLTSS+PPA SQS GITG
Sbjct: 114 FHRVGQAGLQLLTSSDPPALDSQSAGITG 142
>gi|57529246 ubiquitin thioesterase 19 [Homo sapiens]
Length = 1318
Score = 42.7 bits (99), Expect = 2e-04
Identities = 21/33 (63%), Positives = 23/33 (69%)
Query: 5 YVAQADLELLTSSNPPASASQSTGITGGSHRAR 37
YVAQA LE L S +P ASAS + GITG HR R
Sbjct: 47 YVAQAGLEPLASGDPSASASHAAGITGSRHRTR 79
>gi|119964690 glycogenin 2 isoform b [Homo sapiens]
Length = 501
Score = 42.7 bits (99), Expect = 2e-04
Identities = 21/29 (72%), Positives = 23/29 (79%)
Query: 2 EFHYVAQADLELLTSSNPPASASQSTGIT 30
EFH+ AQA LELL SSN P SASQS G+T
Sbjct: 5 EFHHGAQAGLELLRSSNSPTSASQSAGMT 33
>gi|239751420 PREDICTED: similar to hCG2039376 [Homo sapiens]
Length = 858
Score = 42.0 bits (97), Expect = 3e-04
Identities = 22/29 (75%), Positives = 23/29 (79%)
Query: 6 VAQADLELLTSSNPPASASQSTGITGGSH 34
VAQA LELL SS+P A ASQS GITG SH
Sbjct: 701 VAQAGLELLVSSSPSALASQSAGITGMSH 729
>gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1
[Homo sapiens]
Length = 759
Score = 41.6 bits (96), Expect = 4e-04
Identities = 21/30 (70%), Positives = 23/30 (76%)
Query: 1 MEFHYVAQADLELLTSSNPPASASQSTGIT 30
M FH+V QA LELL SS+ P SASQS GIT
Sbjct: 39 MGFHHVGQAGLELLISSDLPTSASQSAGIT 68
>gi|169213867 PREDICTED: hypothetical protein LOC100128682 [Homo
sapiens]
Length = 299
Score = 41.2 bits (95), Expect = 5e-04
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 8 QADLELLTSSNPPASASQSTGITGGSHRARPGPVHF 43
QA ++LLT+S+ P ASQS ITG SH A+P P+ F
Sbjct: 187 QAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLIF 222
>gi|169214305 PREDICTED: hypothetical protein LOC100128682 [Homo
sapiens]
Length = 299
Score = 41.2 bits (95), Expect = 5e-04
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 8 QADLELLTSSNPPASASQSTGITGGSHRARPGPVHF 43
QA ++LLT+S+ P ASQS ITG SH A+P P+ F
Sbjct: 187 QAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLIF 222
>gi|169213267 PREDICTED: hypothetical protein LOC100128682 [Homo
sapiens]
Length = 299
Score = 41.2 bits (95), Expect = 5e-04
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 8 QADLELLTSSNPPASASQSTGITGGSHRARPGPVHF 43
QA ++LLT+S+ P ASQS ITG SH A+P P+ F
Sbjct: 187 QAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLIF 222
>gi|66277202 podocalyxin-like isoform 1 precursor [Homo sapiens]
Length = 558
Score = 40.8 bits (94), Expect = 6e-04
Identities = 20/31 (64%), Positives = 23/31 (74%)
Query: 3 FHYVAQADLELLTSSNPPASASQSTGITGGS 33
FH+V+QA LELLTS + P ASQS GIT S
Sbjct: 240 FHHVSQAGLELLTSGDLPTLASQSAGITASS 270
>gi|4506473 v-rel reticuloendotheliosis viral oncogene homolog [Homo
sapiens]
Length = 619
Score = 38.9 bits (89), Expect = 0.002
Identities = 22/38 (57%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 3 FHYVAQADLELLTSSNPPASASQSTGIT-GGSHRARPG 39
F +V Q LELLTS +PP ASQS GIT R RPG
Sbjct: 312 FRHVDQDGLELLTSGDPPTLASQSAGITVNFPERPRPG 349
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.131 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,450,377
Number of Sequences: 37866
Number of extensions: 565058
Number of successful extensions: 2648
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 196
Number of HSP's that attempted gapping in prelim test: 2418
Number of HSP's gapped (non-prelim): 413
length of query: 176
length of database: 18,247,518
effective HSP length: 95
effective length of query: 81
effective length of database: 14,650,248
effective search space: 1186670088
effective search space used: 1186670088
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.