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Search of human proteins with 63079680
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|63079680 zinc fingers and homeoboxes 1 [Homo sapiens]
(873 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|63079683 zinc fingers and homeoboxes 1 [Homo sapiens] 1751 0.0
gi|63079680 zinc fingers and homeoboxes 1 [Homo sapiens] 1751 0.0
gi|7662342 zinc fingers and homeoboxes 2 [Homo sapiens] 559 e-159
gi|28827782 zinc fingers and homeoboxes 3 [Homo sapiens] 503 e-142
gi|158631177 homeodomain leucine zipper protein [Homo sapiens] 110 7e-24
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 63 1e-09
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 51 5e-06
gi|114431236 zinc finger protein 462 [Homo sapiens] 48 3e-05
gi|11641283 LIM homeobox protein 5 [Homo sapiens] 45 2e-04
gi|91982772 mucin 17 [Homo sapiens] 45 3e-04
gi|61969662 double homeobox A [Homo sapiens] 45 3e-04
gi|239758038 PREDICTED: mucin 3A, cell surface associated, parti... 41 0.004
gi|90652851 zinc finger transcription factor TRPS1 [Homo sapiens] 41 0.006
gi|21361183 paired-like homeodomain transcription factor 2 isofo... 41 0.006
gi|42476164 POU class 2 homeobox 1 [Homo sapiens] 40 0.007
gi|31563348 paired box 3 isoform PAX3g [Homo sapiens] 40 0.007
gi|31563346 paired box 3 isoform PAX3h [Homo sapiens] 40 0.007
gi|31563344 paired box 3 isoform PAX3e [Homo sapiens] 40 0.007
gi|31563342 paired box 3 isoform PAX3d [Homo sapiens] 40 0.007
gi|31563340 paired box 3 isoform PAX3 [Homo sapiens] 40 0.007
gi|239743291 PREDICTED: mucin 3A, intestinal [Homo sapiens] 40 0.007
gi|30410785 LIM homeobox protein 1 [Homo sapiens] 40 0.007
gi|142976638 sine oculis homeobox homolog 4 [Homo sapiens] 40 0.009
gi|30061565 La ribonucleoprotein domain family member 2 isoform ... 40 0.012
gi|30061569 La ribonucleoprotein domain family member 2 isoform ... 40 0.012
gi|30061567 La ribonucleoprotein domain family member 2 isoform ... 40 0.012
gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] 40 0.012
gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens] 40 0.012
gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens] 40 0.012
gi|195546902 suppressor of Ty 5 homolog isoform b [Homo sapiens] 40 0.012
>gi|63079683 zinc fingers and homeoboxes 1 [Homo sapiens]
Length = 873
Score = 1751 bits (4534), Expect = 0.0
Identities = 873/873 (100%), Positives = 873/873 (100%)
Query: 1 MASRRKSTTPCMVLASEQDPDLELISDLDEGPPVLTPVENTRAESISSDEEVHESVDSDN 60
MASRRKSTTPCMVLASEQDPDLELISDLDEGPPVLTPVENTRAESISSDEEVHESVDSDN
Sbjct: 1 MASRRKSTTPCMVLASEQDPDLELISDLDEGPPVLTPVENTRAESISSDEEVHESVDSDN 60
Query: 61 QQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEH 120
QQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEH
Sbjct: 61 QQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEH 120
Query: 121 NLKYHPGEENFKLTMVKRNNQTIFEQTINDLTFDGSFVKEENAEQAESTEVSSSGISISK 180
NLKYHPGEENFKLTMVKRNNQTIFEQTINDLTFDGSFVKEENAEQAESTEVSSSGISISK
Sbjct: 121 NLKYHPGEENFKLTMVKRNNQTIFEQTINDLTFDGSFVKEENAEQAESTEVSSSGISISK 180
Query: 181 TPIMKMMKNKVENKRIAVHHNSVEDVPEEKENEIKPDREEIVENPSSSASESNTSTSIVN 240
TPIMKMMKNKVENKRIAVHHNSVEDVPEEKENEIKPDREEIVENPSSSASESNTSTSIVN
Sbjct: 181 TPIMKMMKNKVENKRIAVHHNSVEDVPEEKENEIKPDREEIVENPSSSASESNTSTSIVN 240
Query: 241 RIHPSTASTVVTPAAVLPGLAQVITAVSAQQNSNLIPKVLIPVNSIPTYNAALDNNPLLL 300
RIHPSTASTVVTPAAVLPGLAQVITAVSAQQNSNLIPKVLIPVNSIPTYNAALDNNPLLL
Sbjct: 241 RIHPSTASTVVTPAAVLPGLAQVITAVSAQQNSNLIPKVLIPVNSIPTYNAALDNNPLLL 300
Query: 301 NTYNKFPYPTMSEITVLSAQAKYTEEQIKIWFSAQRLKHGVSWTPEEVEEARRKQFNGTV 360
NTYNKFPYPTMSEITVLSAQAKYTEEQIKIWFSAQRLKHGVSWTPEEVEEARRKQFNGTV
Sbjct: 301 NTYNKFPYPTMSEITVLSAQAKYTEEQIKIWFSAQRLKHGVSWTPEEVEEARRKQFNGTV 360
Query: 361 HTVPQTITVIPTHISTGSNGLPSILQTCQIVGQPGLVLTQVAGTNTLPVTAPIALTVAGV 420
HTVPQTITVIPTHISTGSNGLPSILQTCQIVGQPGLVLTQVAGTNTLPVTAPIALTVAGV
Sbjct: 361 HTVPQTITVIPTHISTGSNGLPSILQTCQIVGQPGLVLTQVAGTNTLPVTAPIALTVAGV 420
Query: 421 PSQNNIQKSQVPAAQPTAETKPATAAVPTSQSVKHETALVNPDSFGIRAKKTKEQLAELK 480
PSQNNIQKSQVPAAQPTAETKPATAAVPTSQSVKHETALVNPDSFGIRAKKTKEQLAELK
Sbjct: 421 PSQNNIQKSQVPAAQPTAETKPATAAVPTSQSVKHETALVNPDSFGIRAKKTKEQLAELK 480
Query: 481 VSYLKNQFPHDSEIIRLMKITGLTKGEIKKWFSDTRYNQRNSKSNQCLHLNNDSSTTIII 540
VSYLKNQFPHDSEIIRLMKITGLTKGEIKKWFSDTRYNQRNSKSNQCLHLNNDSSTTIII
Sbjct: 481 VSYLKNQFPHDSEIIRLMKITGLTKGEIKKWFSDTRYNQRNSKSNQCLHLNNDSSTTIII 540
Query: 541 DSSDETTESPTVGTAQPKQSWNPFPDFTPQKFKEKTAEQLRVLQASFLNSSVLTDEELNR 600
DSSDETTESPTVGTAQPKQSWNPFPDFTPQKFKEKTAEQLRVLQASFLNSSVLTDEELNR
Sbjct: 541 DSSDETTESPTVGTAQPKQSWNPFPDFTPQKFKEKTAEQLRVLQASFLNSSVLTDEELNR 600
Query: 601 LRAQTKLTRREIDAWFTEKKKSKALKEEKMEIDESNAGSSKEEAGETSPADESGAPKSGS 660
LRAQTKLTRREIDAWFTEKKKSKALKEEKMEIDESNAGSSKEEAGETSPADESGAPKSGS
Sbjct: 601 LRAQTKLTRREIDAWFTEKKKSKALKEEKMEIDESNAGSSKEEAGETSPADESGAPKSGS 660
Query: 661 TGKICKKTPEQLHMLKSAFVRTQWPSPEEYDKLAKESGLARTDIVSWFGDTRYAWKNGNL 720
TGKICKKTPEQLHMLKSAFVRTQWPSPEEYDKLAKESGLARTDIVSWFGDTRYAWKNGNL
Sbjct: 661 TGKICKKTPEQLHMLKSAFVRTQWPSPEEYDKLAKESGLARTDIVSWFGDTRYAWKNGNL 720
Query: 721 KWYYYYQSANSSSMNGLSSLRKRGRGRPKGRGRGRPRGRPRGSKRINNWDRGPSLIKFKT 780
KWYYYYQSANSSSMNGLSSLRKRGRGRPKGRGRGRPRGRPRGSKRINNWDRGPSLIKFKT
Sbjct: 721 KWYYYYQSANSSSMNGLSSLRKRGRGRPKGRGRGRPRGRPRGSKRINNWDRGPSLIKFKT 780
Query: 781 GTAILKDYYLKHKFLNEQDLDELVNKSHMGYEQVREWFAERQRRSELGIELFEENEEEDE 840
GTAILKDYYLKHKFLNEQDLDELVNKSHMGYEQVREWFAERQRRSELGIELFEENEEEDE
Sbjct: 781 GTAILKDYYLKHKFLNEQDLDELVNKSHMGYEQVREWFAERQRRSELGIELFEENEEEDE 840
Query: 841 VIDDQEEDEEETDDSDTWEPPRHVKRKLSKSDD 873
VIDDQEEDEEETDDSDTWEPPRHVKRKLSKSDD
Sbjct: 841 VIDDQEEDEEETDDSDTWEPPRHVKRKLSKSDD 873
>gi|63079680 zinc fingers and homeoboxes 1 [Homo sapiens]
Length = 873
Score = 1751 bits (4534), Expect = 0.0
Identities = 873/873 (100%), Positives = 873/873 (100%)
Query: 1 MASRRKSTTPCMVLASEQDPDLELISDLDEGPPVLTPVENTRAESISSDEEVHESVDSDN 60
MASRRKSTTPCMVLASEQDPDLELISDLDEGPPVLTPVENTRAESISSDEEVHESVDSDN
Sbjct: 1 MASRRKSTTPCMVLASEQDPDLELISDLDEGPPVLTPVENTRAESISSDEEVHESVDSDN 60
Query: 61 QQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEH 120
QQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEH
Sbjct: 61 QQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEH 120
Query: 121 NLKYHPGEENFKLTMVKRNNQTIFEQTINDLTFDGSFVKEENAEQAESTEVSSSGISISK 180
NLKYHPGEENFKLTMVKRNNQTIFEQTINDLTFDGSFVKEENAEQAESTEVSSSGISISK
Sbjct: 121 NLKYHPGEENFKLTMVKRNNQTIFEQTINDLTFDGSFVKEENAEQAESTEVSSSGISISK 180
Query: 181 TPIMKMMKNKVENKRIAVHHNSVEDVPEEKENEIKPDREEIVENPSSSASESNTSTSIVN 240
TPIMKMMKNKVENKRIAVHHNSVEDVPEEKENEIKPDREEIVENPSSSASESNTSTSIVN
Sbjct: 181 TPIMKMMKNKVENKRIAVHHNSVEDVPEEKENEIKPDREEIVENPSSSASESNTSTSIVN 240
Query: 241 RIHPSTASTVVTPAAVLPGLAQVITAVSAQQNSNLIPKVLIPVNSIPTYNAALDNNPLLL 300
RIHPSTASTVVTPAAVLPGLAQVITAVSAQQNSNLIPKVLIPVNSIPTYNAALDNNPLLL
Sbjct: 241 RIHPSTASTVVTPAAVLPGLAQVITAVSAQQNSNLIPKVLIPVNSIPTYNAALDNNPLLL 300
Query: 301 NTYNKFPYPTMSEITVLSAQAKYTEEQIKIWFSAQRLKHGVSWTPEEVEEARRKQFNGTV 360
NTYNKFPYPTMSEITVLSAQAKYTEEQIKIWFSAQRLKHGVSWTPEEVEEARRKQFNGTV
Sbjct: 301 NTYNKFPYPTMSEITVLSAQAKYTEEQIKIWFSAQRLKHGVSWTPEEVEEARRKQFNGTV 360
Query: 361 HTVPQTITVIPTHISTGSNGLPSILQTCQIVGQPGLVLTQVAGTNTLPVTAPIALTVAGV 420
HTVPQTITVIPTHISTGSNGLPSILQTCQIVGQPGLVLTQVAGTNTLPVTAPIALTVAGV
Sbjct: 361 HTVPQTITVIPTHISTGSNGLPSILQTCQIVGQPGLVLTQVAGTNTLPVTAPIALTVAGV 420
Query: 421 PSQNNIQKSQVPAAQPTAETKPATAAVPTSQSVKHETALVNPDSFGIRAKKTKEQLAELK 480
PSQNNIQKSQVPAAQPTAETKPATAAVPTSQSVKHETALVNPDSFGIRAKKTKEQLAELK
Sbjct: 421 PSQNNIQKSQVPAAQPTAETKPATAAVPTSQSVKHETALVNPDSFGIRAKKTKEQLAELK 480
Query: 481 VSYLKNQFPHDSEIIRLMKITGLTKGEIKKWFSDTRYNQRNSKSNQCLHLNNDSSTTIII 540
VSYLKNQFPHDSEIIRLMKITGLTKGEIKKWFSDTRYNQRNSKSNQCLHLNNDSSTTIII
Sbjct: 481 VSYLKNQFPHDSEIIRLMKITGLTKGEIKKWFSDTRYNQRNSKSNQCLHLNNDSSTTIII 540
Query: 541 DSSDETTESPTVGTAQPKQSWNPFPDFTPQKFKEKTAEQLRVLQASFLNSSVLTDEELNR 600
DSSDETTESPTVGTAQPKQSWNPFPDFTPQKFKEKTAEQLRVLQASFLNSSVLTDEELNR
Sbjct: 541 DSSDETTESPTVGTAQPKQSWNPFPDFTPQKFKEKTAEQLRVLQASFLNSSVLTDEELNR 600
Query: 601 LRAQTKLTRREIDAWFTEKKKSKALKEEKMEIDESNAGSSKEEAGETSPADESGAPKSGS 660
LRAQTKLTRREIDAWFTEKKKSKALKEEKMEIDESNAGSSKEEAGETSPADESGAPKSGS
Sbjct: 601 LRAQTKLTRREIDAWFTEKKKSKALKEEKMEIDESNAGSSKEEAGETSPADESGAPKSGS 660
Query: 661 TGKICKKTPEQLHMLKSAFVRTQWPSPEEYDKLAKESGLARTDIVSWFGDTRYAWKNGNL 720
TGKICKKTPEQLHMLKSAFVRTQWPSPEEYDKLAKESGLARTDIVSWFGDTRYAWKNGNL
Sbjct: 661 TGKICKKTPEQLHMLKSAFVRTQWPSPEEYDKLAKESGLARTDIVSWFGDTRYAWKNGNL 720
Query: 721 KWYYYYQSANSSSMNGLSSLRKRGRGRPKGRGRGRPRGRPRGSKRINNWDRGPSLIKFKT 780
KWYYYYQSANSSSMNGLSSLRKRGRGRPKGRGRGRPRGRPRGSKRINNWDRGPSLIKFKT
Sbjct: 721 KWYYYYQSANSSSMNGLSSLRKRGRGRPKGRGRGRPRGRPRGSKRINNWDRGPSLIKFKT 780
Query: 781 GTAILKDYYLKHKFLNEQDLDELVNKSHMGYEQVREWFAERQRRSELGIELFEENEEEDE 840
GTAILKDYYLKHKFLNEQDLDELVNKSHMGYEQVREWFAERQRRSELGIELFEENEEEDE
Sbjct: 781 GTAILKDYYLKHKFLNEQDLDELVNKSHMGYEQVREWFAERQRRSELGIELFEENEEEDE 840
Query: 841 VIDDQEEDEEETDDSDTWEPPRHVKRKLSKSDD 873
VIDDQEEDEEETDDSDTWEPPRHVKRKLSKSDD
Sbjct: 841 VIDDQEEDEEETDDSDTWEPPRHVKRKLSKSDD 873
>gi|7662342 zinc fingers and homeoboxes 2 [Homo sapiens]
Length = 837
Score = 559 bits (1441), Expect = e-159
Identities = 347/889 (39%), Positives = 492/889 (55%), Gaps = 109/889 (12%)
Query: 1 MASRRKSTTPCMVLAS---EQDPDLELISDLDEG-----PPVLTPVENTRAESISSDEEV 52
MAS+RKSTTPCMV S EQD E+ ++G P V E+ S + EV
Sbjct: 1 MASKRKSTTPCMVRTSQVVEQDVPEEVDRAKEKGIGTPQPDVAKDSWAAELENSSKENEV 60
Query: 53 HESVDSDNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTK 112
E Q+KK++GGYECKYC + T +LN FT HVD +HPNV+LN YVC ECNF TK
Sbjct: 61 IEVKSMGESQSKKLQGGYECKYCPYSTQNLNEFTEHVDMQHPNVILNPLYVCAECNFTTK 120
Query: 113 RYDALSEHNLKYHPGEENFKLTMVKRNNQTIFEQTINDLTFDGSFVKEENAEQAESTEVS 172
+YD+LS+HN K+HPGE NFKL ++KRNNQT+ EQ+I S T S
Sbjct: 121 KYDSLSDHNSKFHPGEANFKLKLIKRNNQTVLEQSIETTNHVVSI-----TTSGPGTGDS 175
Query: 173 SSGISISKTPIMKMMKNKVENKRIAVHHNSVEDVPEEKENEIKPDREEIVENPSSSASES 232
SGIS+SKTPIMK K K + K++ +K EI P EN +
Sbjct: 176 DSGISVSKTPIMKPGKPKADAKKV-----------PKKPEEITP------ENHVEGTARL 218
Query: 233 NTSTSIVNRIHPSTASTVVTPAAVLPGLAQVITAVSAQQNSNLIPKVLIPVNSIPTYNAA 292
T T+ + S + + L V+ +V N NL+PKV +P+N+ YN+A
Sbjct: 219 VTDTAEI-------LSRLGGVELLQDTLGHVMPSVQLPPNINLVPKVPVPLNT-TKYNSA 270
Query: 293 LDNNPLLLNTYNKFPYPTMSEITVLSAQAKYTEEQIKIWFSAQRLKHGVSWTPEEVEEAR 352
LD N ++N++NKFPYPT +E++ L+A +K+ EE I+IWF+ QRLKHG+SW+PEEVEEAR
Sbjct: 271 LDTNATMINSFNKFPYPTQAELSWLTAASKHPEEHIRIWFATQRLKHGISWSPEEVEEAR 330
Query: 353 RKQFNGTVHTVPQTITVIPTHISTGSNGLPSILQT---CQIVGQPGLVLTQVAGTNTLPV 409
+K FNGT+ +VP TITV+P ++ P ILQT CQI+GQ LVLTQV +T
Sbjct: 331 KKMFNGTIQSVPPTITVLPAQLAPTKVTQP-ILQTALPCQILGQTSLVLTQVTSGSTTVS 389
Query: 410 TAPIALTVAGVPSQNNIQKSQVPAAQPTAETKPATAAVPTSQSVKHETALVNPDSFGIRA 469
+PI L VAGV + + P A P + +P A VP K + P S
Sbjct: 390 CSPITLAVAGVTNHGQKRPLVTPQAAPEPK-RPHIAQVP-EPPPKVANPPLTPAS---DR 444
Query: 470 KKTKEQLAELKVSYLKNQFPHDSEIIRLMKITGLTKGEIKKWFSDTRYNQRNSKSNQCLH 529
KKTKEQ+A LK S+L++QFP D+E+ RL+++TGL + EIKKWFSD RY + +H
Sbjct: 445 KKTKEQIAHLKASFLQSQFPDDAEVYRLIEVTGLARSEIKKWFSDHRYRCQRG----IVH 500
Query: 530 LNNDSSTTIIIDSSDETTESPTVGTAQPKQSWNPFPDFTPQKFKEKTAEQLRVLQASFLN 589
+ ++S + + ++ ++++ +PDF PQKFKEKT Q+++L+ SFL
Sbjct: 501 ITSESL----------AKDQLAIAASRHGRTYHAYPDFAPQKFKEKTQGQVKILEDSFLK 550
Query: 590 SSVLTDEELNRLRAQTKLTRREIDAWFTEKKKSKALKEEKMEIDESNAGSSKEEAGETSP 649
SS T EL+RLR +TKL+RREID+WF+E++K + E+ + +D +G ++ G +
Sbjct: 551 SSFPTQAELDRLRVETKLSRREIDSWFSERRKLRDSMEQAV-LDSMGSGKKGQDVGAPNG 609
Query: 650 A-----DESGAPKSG---STGKICKKTPEQLHMLKSAFVRTQWPSPEEYDKLAKESGLAR 701
A SGA + S K+ EQ+H+L+S F RTQWP+P+EYD+LA ++GL R
Sbjct: 610 ALSRLDQLSGAQLTSSLPSPSPAIAKSQEQVHLLRSTFARTQWPTPQEYDQLAAKTGLVR 669
Query: 702 TDIVSWFGDTRYAWKNGNLKWYYYYQSANSSSMNGLSSLRKRGRGRPKGRGRGRPRGRPR 761
T+IV WF + R K G +KW YQ + +G ++ ++
Sbjct: 670 TEIVRWFKENRCLLKTGTVKWMEQYQHQPMADDHGYDAVARKA----------------- 712
Query: 762 GSKRINNWDRGPSLIKFKTGTAILKDYYLKHKFLNEQDLDELVNKSHMGYEQVR------ 815
P K G ++ YY K L E+DL++LV + +G E +
Sbjct: 713 ---------TKPMAESPKNGGDVVPQYYKDPKKLCEEDLEKLVTRVKVGSEPAKDCLPAK 763
Query: 816 --EWFAERQRRSELGIELFEENEEEDEVIDDQE----EDEEETDDSDTW 858
E ++R S + +EN EE V+D E E++ +D SD+W
Sbjct: 764 PSEATSDRSEGSSRDGQGSDEN-EESSVVDYVEVTVGEEDAISDRSDSW 811
>gi|28827782 zinc fingers and homeoboxes 3 [Homo sapiens]
Length = 956
Score = 503 bits (1294), Expect = e-142
Identities = 339/995 (34%), Positives = 496/995 (49%), Gaps = 198/995 (19%)
Query: 1 MASRRKSTTPCMVLASE---QDPDLEL--ISDLDEGPPVLTPVENTRAESISSDEEVHES 55
MAS+RKSTTPCM+ QD +E L EGP P E + A S ++ S
Sbjct: 1 MASKRKSTTPCMIPVKTVVLQDASMEAQPAETLPEGPQQDLPPEASAASSEAAQNP--SS 58
Query: 56 VDSD---NQQNKKVEGG-YECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLT 111
D N ++G Y CKYC F++ D+ F H++SEH + + ++VC C+FL
Sbjct: 59 TDGSTLANGHRSTLDGYLYSCKYCDFRSHDMTQFVGHMNSEHTDFNKDPTFVCSGCSFLA 118
Query: 112 KRYDALSEHNLKYHPGEENFKLTMVKRNNQTIFEQTINDLTFDGSFVKEENAEQAESTEV 171
K + LS HN H GE +F + K +N + EQ+I + T E +AE A+
Sbjct: 119 KTPEGLSLHNATCHSGEASFVWNVAKPDNHVVVEQSIPESTSTPDLAGEPSAEGADG--- 175
Query: 172 SSSGISISKTPIMKMMKNKVENKRIAVHHNSVEDVPEEKENEIKPDRE----EIVENPSS 227
+ I I+KTPIMK+MK K E K+I H E+VP + E P E+ E S
Sbjct: 176 -QAEIIITKTPIMKIMKGKAEAKKI---HTLKENVPSQPVGEALPKLSTGEMEVREGDHS 231
Query: 228 ----SASESNTSTSIVNRIHPSTASTVVTPAAVLPGLAQVITA-----VSAQQN------ 272
+ S S S H + + T + G+AQ ++ V AQ +
Sbjct: 232 FINGAVPVSQASASSAKNPHAANGPLIGTVPVLPAGIAQFLSLQQQPPVHAQHHVHQPLP 291
Query: 273 -SNLIPKVLIPVNSIPTYNAALDNNPLLLNTYNKFPYPTMSEITVLSAQAKYTEEQIKIW 331
+ +PKV+IP++SIPTYNAA+D+N L N+++KFPYPT +E+ L+ KY EEQ+KIW
Sbjct: 292 TAKALPKVMIPLSSIPTYNAAMDSNSFLKNSFHKFPYPTKAELCYLTVVTKYPEEQLKIW 351
Query: 332 FSAQRLKHGVSWTPEEVEEARRKQFNGTVHTVPQ-TITVIPTHISTGSNGLPSILQTC-- 388
F+AQRLK G+SW+PEE+E+AR+K FN + +VPQ TITV+ T + + + ++Q
Sbjct: 352 FTAQRLKQGISWSPEEIEDARKKMFNTVIQSVPQPTITVLNTPLVASAGNVQHLIQAALP 411
Query: 389 -QIVGQP-----GLVLTQVAGTNTLPVTA-PIALTVAGVPSQNNIQKSQVPAAQPTAETK 441
+VGQP GL++TQ N L T+ P+ LTV VP Q + + T+ K
Sbjct: 412 GHVVGQPEGTGGGLLVTQPLMANGLQATSSPLPLTVTSVPKQPGVAPINTVCSNTTSAVK 471
Query: 442 PATAAVPTSQSVKHETALVNPDSFGIRAKKTKEQLAELKVSYLKNQFPHDSEIIRLMKIT 501
AA + T+ D+ + KK+ EQL+ LK S+ +NQFP SE+ L K+T
Sbjct: 472 VVNAAQSLLTACPSITSQAFLDASIYKNKKSHEQLSALKGSFCRNQFPGQSEVEHLTKVT 531
Query: 502 GLTKGEIKKWFSDTRYNQRNSKSNQCLHLNNDSSTTIIIDSSDETTESP----------- 550
GL+ E++KWFSD RY+ RN K ++ + + SS IIIDS E + SP
Sbjct: 532 GLSTREVRKWFSDRRYHCRNLKGSRAMIPGDHSS--IIIDSVPEVSFSPSSKVPEVTCIP 589
Query: 551 ---TVGT--AQPKQSWNPFPDFTPQKFKEKTAEQLRVLQASFLNSSVLTDEELNRLRAQT 605
T+ T + +QSW+ PDFTP K+KE+ EQLR L++SF + + DEEL+RLR++T
Sbjct: 590 TTATLATHPSAKRQSWHQTPDFTPTKYKERAPEQLRALESSFAQNPLPLDEELDRLRSET 649
Query: 606 KLTRREIDAWFTEKKKS-------KALKEEKMEIDES--NAGSSKEEAGETSPADESGA- 655
K+TRREID+WF+E++K KA + E +E+ + G ++ A E + E+G+
Sbjct: 650 KMTRREIDSWFSERRKKVNAEETKKAEENASQEEEEAAEDEGGEEDLASELRVSGENGSL 709
Query: 656 -----------------------------------------PKSGSTGKI---------C 665
P+ + K+ C
Sbjct: 710 EMPSSHILAERKVSPIKINLKNLRVTEANGRNEIPGLGACDPEDDESNKLAEQLPGKVSC 769
Query: 666 KKTPEQLHMLKSAFVRTQWPSPEEYDKLAKESGLARTDIVSWFGDTRYAWKNGNLKWYYY 725
KKT +Q H+L+ FV+TQWPS ++YD + ++GL R ++V WFGD+RYA KNG LKWY
Sbjct: 770 KKTAQQRHLLRQLFVQTQWPSNQDYDSIMAQTGLPRPEVVRWFGDSRYALKNGQLKWYED 829
Query: 726 YQSANSSSMNGLSSLRKRGRGRPKGRGRGRPRGRPRGSKRINNWDRGPSLIKFKTGTA-I 784
Y+ N P L+ G +
Sbjct: 830 YKRGNFP----------------------------------------PGLLVIAPGNREL 849
Query: 785 LKDYYLKHKFLNEQDLDELVNKSHMGYEQVREWFAERQRRSELGIELFEENEEEDEVIDD 844
L+DYY+ HK L E+DL L +K+ M +QV++WFAE+ EE V D
Sbjct: 850 LQDYYMTHKMLYEEDLQNLCDKTQMSSQQVKQWFAEKM------------GEETRAVADT 897
Query: 845 QEEDE-------------------EETDDSDTWEP 860
ED+ E +++S++WEP
Sbjct: 898 GSEDQGPGTGELTAVHKGMGDTYSEVSENSESWEP 932
>gi|158631177 homeodomain leucine zipper protein [Homo sapiens]
Length = 550
Score = 110 bits (274), Expect = 7e-24
Identities = 71/199 (35%), Positives = 106/199 (53%), Gaps = 22/199 (11%)
Query: 663 KICKKTPEQLHMLKSAFVRTQWPSPEEYDKLAKESGLARTDIVSWFGDTRYAWKNGNLKW 722
K +KT EQL +LKS F++ QW E+Y KL + +GL R +I+ WFGDTRYA K+G LKW
Sbjct: 359 KTKRKTKEQLAILKSFFLQCQWARREDYQKLEQITGLPRPEIIQWFGDTRYALKHGQLKW 418
Query: 723 YYYYQSANSSSMNGLSSLRKRGRGRPKGRGRGRPRGRPRGSKRINNWDRGPSLIKFKTGT 782
+ +++ G S + P P ++ +N P L
Sbjct: 419 F------RDNAVPGAPSFQDPAIPTP-----------PPSTRSLNERAETPPLPIPPPPP 461
Query: 783 AI--LKDYYLKHKFLNEQDLDELVNKSHMGYEQVREWFAER-QRRSELGIELFEENEEED 839
I L+ Y+ H+ L E D+ +L S + +QV +WF R + +E+ + L EE EEE+
Sbjct: 462 DIQPLERYWAAHQQLRETDIPQLSQASRLSTQQVLDWFDSRLPQPAEVVVCLDEEEEEEE 521
Query: 840 EVI--DDQEEDEEETDDSD 856
E + DD+EE+EEE +D D
Sbjct: 522 EELPEDDEEEEEEEEEDDD 540
Score = 66.2 bits (160), Expect = 1e-10
Identities = 28/62 (45%), Positives = 44/62 (70%)
Query: 293 LDNNPLLLNTYNKFPYPTMSEITVLSAQAKYTEEQIKIWFSAQRLKHGVSWTPEEVEEAR 352
LD+N LL T++ FPYP++++I +L + E++K WF AQRL+ G+SW+ EE+EE R
Sbjct: 64 LDSNEHLLKTFSYFPYPSLADIALLCLRYGLQMEKVKTWFMAQRLRCGISWSSEEIEETR 123
Query: 353 RK 354
+
Sbjct: 124 AR 125
Score = 55.5 bits (132), Expect = 2e-07
Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 28/237 (11%)
Query: 433 AAQPTAETKPATAAVPTSQSVKHE--------TALVNPDSFGIRA--KKTKEQLAELKVS 482
+ P+ + P Q ++H T ++PD R +KTKEQLA LK
Sbjct: 315 SVSPSEQALPPHLEPAWPQGLRHNSVPGRVGPTEYLSPDMQRQRKTKRKTKEQLAILKSF 374
Query: 483 YLKNQFPHDSEIIRLMKITGLTKGEIKKWFSDTRYNQRNSKSNQCLHLNNDSSTTIIIDS 542
+L+ Q+ + +L +ITGL + EI +WF DTRY ++ + L D++
Sbjct: 375 FLQCQWARREDYQKLEQITGLPRPEIIQWFGDTRYALKHGQ----LKWFRDNAVPGAPSF 430
Query: 543 SDET--TESPTVGTAQPKQSWNPFPDFTPQKFKEKTAEQLRVLQASFLNSSVLTDEELNR 600
D T P+ + + P P P ++ L+ + L + ++ +
Sbjct: 431 QDPAIPTPPPSTRSLNERAETPPLPIPPP-------PPDIQPLERYWAAHQQLRETDIPQ 483
Query: 601 LRAQTKLTRREIDAWFTEKKKSKA-----LKEEKMEIDESNAGSSKEEAGETSPADE 652
L ++L+ +++ WF + A L EE+ E +E +EE E D+
Sbjct: 484 LSQASRLSTQQVLDWFDSRLPQPAEVVVCLDEEEEEEEEELPEDDEEEEEEEEEDDD 540
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 63.2 bits (152), Expect = 1e-09
Identities = 73/288 (25%), Positives = 118/288 (40%), Gaps = 26/288 (9%)
Query: 382 PSILQTCQIVGQPGLVLTQVAGTNTLPVTAPIALTVAGVPSQNNIQKSQVPAAQPTAETK 441
P I QP + LTQ++ LP+ +P+ + +P Q +Q+P E
Sbjct: 2069 PPITSPTIAPAQPSVPLTQLSMPMELPIFSPLMMQT--MPLQT--LPAQLPPQLGPVEPL 2124
Query: 442 PATAAVPTSQSVKHET--ALVNPDSFGIRAKKTKEQLAELKVSYLKNQFPHDSEIIRLMK 499
PA A Q +H+ L+ + R + T +QL L+ + N P + +I +
Sbjct: 2125 PADLA----QLYQHQLNPTLLQQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMAD 2180
Query: 500 ITGLTKGEIKKWFSDTRYNQRNSKSNQCLHLNNDSSTTIIIDSSDETTESPTVGTAQPKQ 559
+GL + IK WF +T + +R + + +N T++ D SP PKQ
Sbjct: 2181 KSGLPQKVIKHWFRNTLFKERQRNKDSPYNFSNPPITSLEELKIDSRPPSP----EPPKQ 2236
Query: 560 SWNPFPDFTPQKFKEKTAEQLRVLQASFLNSSVLTDEELNRLRAQTKLTRREIDAWFTEK 619
+ + +F T QLRVLQ F ++ D+E +L L R I WF +
Sbjct: 2237 EYWGSKRSSRTRF---TDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWF-QN 2292
Query: 620 KKSKALKEEKMEIDESNAGSSKEEAGETSPADESGAPKSGSTGKICKK 667
+ KA K + N G K+ GE ++ + CKK
Sbjct: 2293 ARQKARK------NYENQGEGKD--GERRELTNDRYIRTSNLNYQCKK 2332
Score = 40.4 bits (93), Expect = 0.007
Identities = 39/181 (21%), Positives = 78/181 (43%), Gaps = 17/181 (9%)
Query: 668 TPEQLHMLKSAFVRTQWPSPEEYDKLAKESGLARTDIVSWFGDTRYAWKNGNLKWYYYYQ 727
T +QL +L+ F PS E+ ++A +SGL + I WF +T + + N Y +
Sbjct: 2153 TDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIKHWFRNTLFKERQRNKDSPYNFS 2212
Query: 728 SANSSSMNGLSSLRKRGRGRPKGRGRGRPRGRPRGSKRINNWDRGPSLIKFKT-GTAILK 786
+ +S+ L + P P+ GSKR S +F +L+
Sbjct: 2213 NPPITSLEELKIDSRPPSPEP-------PKQEYWGSKR-------SSRTRFTDYQLRVLQ 2258
Query: 787 DYYLKHKFLNEQDLDELVNKSHMGYEQVREWFAERQRRSELGIELFEENE--EEDEVIDD 844
D++ + + + + ++L N ++ + WF ++++ E E + E E+ +D
Sbjct: 2259 DFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARKNYENQGEGKDGERRELTND 2318
Query: 845 Q 845
+
Sbjct: 2319 R 2319
Score = 35.0 bits (79), Expect = 0.30
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 12/88 (13%)
Query: 642 EEAGETSPADESGAPKSGSTGKICKK--------TPEQLHMLKSAFVRTQWPSPEEYDKL 693
EE SP + SG+ G+ ++ TPEQL +L ++ P+ + D +
Sbjct: 2619 EEKASASPGEND----SGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHI 2674
Query: 694 AKESGLARTDIVSWFGDTRYAWKNGNLK 721
A E GL + + WF +TR + G +
Sbjct: 2675 AHEVGLKKRVVQVWFQNTRARERKGQFR 2702
Score = 33.5 bits (75), Expect = 0.88
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 14/107 (13%)
Query: 430 QVPAAQPTAETKPATAAVPTSQSVKHETALVNPDSFG-------------IRAKKTKEQL 476
Q+PA+ T+ + P T+ + T + E A +P +R T EQL
Sbjct: 2595 QIPASSATSPSTP-TSTMNTLKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQL 2653
Query: 477 AELKVSYLKNQFPHDSEIIRLMKITGLTKGEIKKWFSDTRYNQRNSK 523
L YL + P + + GL K ++ WF +TR +R +
Sbjct: 2654 EILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQVWFQNTRARERKGQ 2700
Score = 33.5 bits (75), Expect = 0.88
Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
Query: 639 SSKEEAGETSPADESGAPKSGSTGKI-------CKKTPEQLHMLKSAFVRTQWPSPEEYD 691
SS + SP A KSG +G + T QL +LKS F + P+ E +
Sbjct: 2918 SSLADPCSPSPGASGSAGKSGDSGDRPGQKRFRTQMTNLQLKVLKSCFNDYRTPTMLECE 2977
Query: 692 KLAKESGLARTDIVSWFGDTRYAWKNGNLKWYYYYQSANSSSMNG 736
L + GL + + WF + R K L ++ N +S G
Sbjct: 2978 VLGNDIGLPKRVVQVWFQNARAKEKKSKLSMAKHF-GINQTSYEG 3021
Score = 31.6 bits (70), Expect = 3.4
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 818 FAERQRRSELGIELFEENEEEDEVIDDQEEDEEETDD 854
F+E+ +E E EE EE +E +++EE+EEE +D
Sbjct: 452 FSEKVEPAEEEAEEEEEEEEAEEEEEEEEEEEEEEED 488
Score = 31.2 bits (69), Expect = 4.4
Identities = 15/58 (25%), Positives = 23/58 (39%)
Query: 36 TPVENTRAESISSDEEVHESVDSDNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEH 93
+P + R S E S + K E Y+C YC + D+N H ++H
Sbjct: 1189 SPATSKRISFPGSSESPLSSKRPKTAEEIKPEQMYQCPYCKYSNADVNRLRVHAMTQH 1246
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 50.8 bits (120), Expect = 5e-06
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 16/173 (9%)
Query: 468 RAKKTKEQLAELKVSYLKNQFPHDSEIIRLMKITGLTKGEIKKWFSDTRYNQRNSKSNQC 527
R + T +QL L+ + N P + +I + + +GL++ IK WF +T + +R +
Sbjct: 2088 RTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIKHWFRNTLFKERQRNKDSP 2147
Query: 528 LHLNNDSSTT---IIIDSSDETTES-PTVGTAQPKQSWNPFPDFTPQKFKEKTAEQLRVL 583
+ +N T I ID + E + + + S F D+ QLRVL
Sbjct: 2148 YNFSNPPITVLEDIRIDPQPTSLEHYKSDASFSKRSSRTRFTDY-----------QLRVL 2196
Query: 584 QASFLNSSVLTDEELNRLRAQTKLTRREIDAWF-TEKKKSKALKEEKMEIDES 635
Q F ++ D+E+ +L L R I WF ++K++ E + E ++
Sbjct: 2197 QDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKARKSYENQAETKDN 2249
Score = 39.7 bits (91), Expect = 0.012
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 629 KMEIDESNAGSSKEEAGETSPADESGAPKSGSTGKICKKTPEQLHMLKSAFVRTQWPSPE 688
K ++D+ + E+ G S D+ + +T TPEQL +L ++ P+ +
Sbjct: 2534 KRKLDDKEDNNCSEKEGGNSGEDQHRDKRLRTT-----ITPEQLEILYEKYLLDSNPTRK 2588
Query: 689 EYDKLAKESGLARTDIVSWFGDTRYAWKNGNLK 721
D +A+E GL + + WF +TR + G +
Sbjct: 2589 MLDHIAREVGLKKRVVQVWFQNTRARERKGQFR 2621
Score = 37.7 bits (86), Expect = 0.047
Identities = 36/129 (27%), Positives = 52/129 (40%), Gaps = 22/129 (17%)
Query: 522 SKSNQCLHLNN-----DSSTTIIIDSSDETTESPTVGTAQPKQSWNPFPDFTPQKFKEKT 576
S ++ +H N+ D S I D D S T A P S NPF P K K
Sbjct: 2822 SLTSPSIHFNDKDGDHDQSFYITDDPDDNADRSETSSIADPS-SPNPFGSSNPFKSKSND 2880
Query: 577 AE------------QLRVLQASFLNSSVLTDEELNRLRAQTKLTRREIDAWFTEKKKSKA 624
QL+VL+A F + T +E L + L +R + WF ++
Sbjct: 2881 RPGHKRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWF----QNAR 2936
Query: 625 LKEEKMEID 633
KE+K +I+
Sbjct: 2937 AKEKKFKIN 2945
Score = 37.0 bits (84), Expect = 0.080
Identities = 24/86 (27%), Positives = 37/86 (43%)
Query: 448 PTSQSVKHETALVNPDSFGIRAKKTKEQLAELKVSYLKNQFPHDSEIIRLMKITGLTKGE 507
P S++H + + R + T QL L+ + N +P D EI +L + L
Sbjct: 2165 PQPTSLEHYKSDASFSKRSSRTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRV 2224
Query: 508 IKKWFSDTRYNQRNSKSNQCLHLNND 533
I WF + R R S NQ +N+
Sbjct: 2225 IVVWFQNARQKARKSYENQAETKDNE 2250
Score = 35.4 bits (80), Expect = 0.23
Identities = 32/174 (18%), Positives = 76/174 (43%), Gaps = 15/174 (8%)
Query: 668 TPEQLHMLKSAFVRTQWPSPEEYDKLAKESGLARTDIVSWFGDTRYAWKNGNLKWYYYYQ 727
T +QL +L++ F PS E+ ++A++SGL++ I WF +T + + N Y +
Sbjct: 2092 TDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIKHWFRNTLFKERQRNKDSPYNFS 2151
Query: 728 SANSSSMNGLSSLRKRGRGRPKGRGRGRPRGRPRGSKRINNWDRGPSLIKFKT-GTAILK 786
+ + + + R P+ + SKR S +F +L+
Sbjct: 2152 NPPITVLEDI-------RIDPQPTSLEHYKSDASFSKR-------SSRTRFTDYQLRVLQ 2197
Query: 787 DYYLKHKFLNEQDLDELVNKSHMGYEQVREWFAERQRRSELGIELFEENEEEDE 840
D++ + + + ++++L ++ + WF ++++ E E ++ ++
Sbjct: 2198 DFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKARKSYENQAETKDNEK 2251
Score = 31.6 bits (70), Expect = 3.4
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 467 IRAKKTKEQLAELKVSYLKNQFPHDSEIIRLMKITGLTKGEIKKWFSDTRYNQRNSK 523
+R T EQL L YL + P + + + GL K ++ WF +TR +R +
Sbjct: 2563 LRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERKGQ 2619
Score = 30.0 bits (66), Expect = 9.8
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 46 ISSDEEVHESVDSDNQQNKKV-EGGYECKYCTFQTPDLNMFTFHVDSEH 93
++ +E+V + NK E Y+C YC + + D + HV S+H
Sbjct: 1147 LAKEEDVATKRSKPTEDNKFCHEQFYQCPYCNYNSRDQSRIQMHVLSQH 1195
>gi|114431236 zinc finger protein 462 [Homo sapiens]
Length = 2506
Score = 48.1 bits (113), Expect = 3e-05
Identities = 41/188 (21%), Positives = 76/188 (40%), Gaps = 26/188 (13%)
Query: 37 PVENTRAESISSDEEVHESVDSDNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNV 96
P + + + S E H ++ +++K Y C+YC+F + + H+ + H +
Sbjct: 1997 PAVSAAVKGLRSHERSHLALAMFTREDK-----YSCQYCSFVSAFRHNLDRHMQTHHGH- 2050
Query: 97 VLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKRNNQTIFEQTINDLTFDG- 155
+ + C C+F + L H LK H GE +K + + TI + + L G
Sbjct: 2051 --HKPFRCKLCSFKSSYNSRLKTHILKAHAGEHAYKCSWCSFSTMTISQLKEHSLKVHGK 2108
Query: 156 ----------------SFVKEENAEQAESTEVSSSGISISKTPIMKMMKNKVENKRIAVH 199
S + A AE E S+ S S+ P ++ N ++ +A +
Sbjct: 2109 ALTLPRPRIVSLLSSHSHHSSQKATPAEEVE-DSNDSSYSEPPDVQQQLNHYQSAALARN 2167
Query: 200 HNSVEDVP 207
++ V VP
Sbjct: 2168 NSRVSPVP 2175
Score = 35.4 bits (80), Expect = 0.23
Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 14/89 (15%)
Query: 53 HESVDSDNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYV--------- 103
H S ++D + ++ Y CK+C F + H HP + + Y+
Sbjct: 829 HNSENTDFGDSGRL---YYCKHCDFNNKSARSVSTHYQRMHPYIKFSFRYILDPNDHSAV 885
Query: 104 --CVECNFLTKRYDALSEHNLKYHPGEEN 130
C+EC ++ L +H ++HP N
Sbjct: 886 YRCLECYIDYTNFEDLQQHYGEHHPEAMN 914
Score = 33.9 bits (76), Expect = 0.68
Identities = 42/200 (21%), Positives = 73/200 (36%), Gaps = 21/200 (10%)
Query: 70 YECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEE 129
+ C CTF H++ + Y C C + TK + L H H
Sbjct: 2300 FRCDKCTFTCSSDESLQQHIEKHNEL----KPYKCQLCYYETKHTEELDSHLRDEHKVSR 2355
Query: 130 NFKLT-MVKRNNQTIFEQTINDLTFDGSFVKEENAEQAESTEV---SSSGISIS---KTP 182
NF+L V + ++ + + D +EE +AE E+ S G +++ + P
Sbjct: 2356 NFELVGRVNLDQLEQMKEKMESSSSDDEDKEEEMNSKAEDRELMRFSDHGAALNTEKRFP 2415
Query: 183 I----MKMMKNKVENKRIAVHHNSVEDVPEEKENEIKPDREEIVEN----PSSSASESNT 234
+ + + H ++ D + EI P +EI+EN PS E +
Sbjct: 2416 CEFCGRAFSQGSEWERHVLRHGMALNDTKQVSREEIHP--KEIMENSVKMPSIEEKEDDE 2473
Query: 235 STSIVNRIHPSTASTVVTPA 254
+ I + T + V A
Sbjct: 2474 AIGIDFSLKNETVAICVVTA 2493
Score = 32.3 bits (72), Expect = 2.0
Identities = 20/104 (19%), Positives = 38/104 (36%), Gaps = 29/104 (27%)
Query: 66 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYV---------------------- 103
+E GY C++C + + N H HP ++ +Y+
Sbjct: 1308 IEAGYHCEWCIYSHTEPNGLLLHYQRRHPEHYVDYTYMATKLWAGPDPSPPSLTMPAEAK 1367
Query: 104 ---CVECNFLTKRYDALSEHNLKYHP----GEENFKLTMVKRNN 140
C +C F ++ H +HP G+E+ L ++K +
Sbjct: 1368 TYRCRDCVFEAVSIWDITNHYQAFHPWAMNGDESVLLDIIKEKD 1411
Score = 32.0 bits (71), Expect = 2.6
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Query: 70 YECKYCTFQTPDLNMFTFHVDSEHPNVVLN-----SSYVCVECNFLTKRYDALSE 119
Y C++C++ +P++ H HP V +N SSYV + L L E
Sbjct: 925 YRCRFCSYTSPNVRSLMPHYQRMHPTVKINNAMIFSSYVVEQQEGLNTESQTLRE 979
Score = 31.6 bits (70), Expect = 3.4
Identities = 31/182 (17%), Positives = 67/182 (36%), Gaps = 30/182 (16%)
Query: 70 YECKYCTFQTPDLNMFTFHVDSEHPNVVLNSS-------------YVCVECNFLTKRYDA 116
Y+C C + +L+ H +HP + + ++ Y C C ++ R
Sbjct: 1470 YQCTVCQSEYNNLHGLLTHYGKKHPGMKVKAADFAQDIDINPGAVYKCRHCPYINTRIHG 1529
Query: 117 LSEHNLKYHPGEENFKLTMVKRNNQTIFEQTINDLTFDGSFVKEENAEQAESTEVSSSGI 176
+ H K HP + K+T E ++D+ + + + + E E++ + G
Sbjct: 1530 VLTHYQKRHP---SIKVTA---------EDFVHDVE-QSADISQNDVE--ETSRIFKQGY 1574
Query: 177 SISKTPIMKMMKNKVENKRIAVHHNSVEDVPEEKENEIKPDREEIVENPSSSASESNTST 236
+ + +E ++ +H+ + PE P + + P + S +
Sbjct: 1575 GAYRCKLCPYTHGTLE--KLKIHYEKYHNQPEFDVFSQSPPKLPVPLEPEMTTEVSPSQV 1632
Query: 237 SI 238
SI
Sbjct: 1633 SI 1634
>gi|11641283 LIM homeobox protein 5 [Homo sapiens]
Length = 402
Score = 45.4 bits (106), Expect = 2e-04
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Query: 582 VLQASFLNSSVLTDEELNRLRAQTKLTRREIDAWFTEKKKSKALKEEKMEIDESNAGSSK 641
V + +L+SS L + LN + + T R + + AL+++ E D S + S K
Sbjct: 114 VCKDDYLSSSSLKEGSLNSV---SSCTDRSLSPDLQD-----ALQDDPKETDNSTS-SDK 164
Query: 642 EEAGETSPADESGAPKSGSTGKICKKTPEQLHMLKSAFVRTQWPSPEEYDKLAKESGLAR 701
E A + SG + G I K QL LK+AF T P+ ++LA+E+GL
Sbjct: 165 ETANNENEEQNSGTKRRGPRTTIKAK---QLETLKAAFAATPKPTRHIREQLAQETGLNM 221
Query: 702 TDIVSWFGDTR 712
I WF + R
Sbjct: 222 RVIQVWFQNRR 232
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 45.1 bits (105), Expect = 3e-04
Identities = 76/364 (20%), Positives = 129/364 (35%), Gaps = 49/364 (13%)
Query: 232 SNTSTSIVNRIHPSTASTVVTPAAVLPGLAQVITAVSAQQNSNLIPKVLIPVNSIPTYNA 291
S ST + ST T T A++ P A+ + ++ + P +PV++ P ++
Sbjct: 3355 SEASTLSTTPVDTSTPVTTSTEASLSPTTAEGTSIPTSSPSEGTTPLASMPVSTTPVVSS 3414
Query: 292 AL--------DNNPLLLNTYNKFPYPTMSEITVLSAQAKYTEEQIKIWFSAQRLKHGVSW 343
+ D+N L+ + PT++E T L T + S L S
Sbjct: 3415 EVNTLSTTPVDSNTLVTTSTEASSSPTIAEGTSLPTS---TTSEGSTPLSIMPL----ST 3467
Query: 344 TPEEVEEARRKQFNGTVHTVPQTITVIPTHISTGSNGLPSILQTCQIVGQPGLVLTQVAG 403
TP EA T+ T P T P S+ +N P+ T ++ P T AG
Sbjct: 3468 TPVASSEA------STLSTTPVD-TSTPVTTSSPTNSSPT---TAEVTSMP----TSTAG 3513
Query: 404 TNTLPVT------APIALTVAGVPSQNNIQKSQVPAAQPTAETKPATAAVPTSQ------ 451
+ P+T P+A + A S + + + A + PAT V T +
Sbjct: 3514 EGSTPLTNMPVSTTPVASSEASTLSTTPVDSNTFVTSSSQASSSPATLQVTTMRMSTPSE 3573
Query: 452 ------SVKHETALVNPDSFGIRAKKTKEQLAELKVSYLKNQFPHDSEIIRLMKITGLTK 505
++ + V + + ++ + S N P E+I L T
Sbjct: 3574 GSSSLTTMLLSSTYVTSSEASTPSTPSVDRSTPVTTSTQSNSTPTPPEVITLPMSTPSEV 3633
Query: 506 GEIKKWFSDTRYNQRNSKSNQCLHLNNDSSTTIIIDSSDETTESPTVGTAQPKQSWNPFP 565
+ + S++ L D+ST +I +S + + SP W P
Sbjct: 3634 STPLTIMPVSTTSVTISEAGTASTLPVDTSTPVI--TSTQVSSSPVTPEGTTMPIWTPSE 3691
Query: 566 DFTP 569
TP
Sbjct: 3692 GSTP 3695
Score = 35.0 bits (79), Expect = 0.30
Identities = 70/310 (22%), Positives = 108/310 (34%), Gaps = 66/310 (21%)
Query: 166 AESTEVSSSGISISKTPI--MKMMKNKVENKRIAVHHNSVED----VPEEKENEIKPDRE 219
AE T + +S +S TP+ + + V N ++ + D E P
Sbjct: 2264 AEGTSIPTSTLSEGTTPLTSIPVSHTLVANSEVSTLSTTPVDSNTPFTTSTEASSPPPTA 2323
Query: 220 EIVENPSSSASESNT-------STSIVNRIHPSTASTVV----TP------AAVLPGLAQ 262
E P+S++SE NT ST++V ST ST TP A P A
Sbjct: 2324 EGTSMPTSTSSEGNTPLTRMPVSTTMVASFETSTLSTTPADTSTPVTTYSQAGSSPTTAD 2383
Query: 263 VITAVSAQQNSNLIPKVLIPVNSIPTYNAALDNNPLLLNTYNKFPYPTMSEITVLS--AQ 320
+ ++ + P +PV+++P ++ +T++ P T + +T + +
Sbjct: 2384 DTSMPTSTYSEGSTPLTSVPVSTMPVVSSEA-------STHSTTPVDTSTPVTTSTEASS 2436
Query: 321 AKYTEEQIKIWFSAQR------LKHGVSWTPEEVEEARRKQFNGTVHTVPQTITVIPTHI 374
+ T E I S VS TP EA GT+ T P T P
Sbjct: 2437 SPTTAEGTSIPTSPPSEGTTPLASMPVSTTPVVSSEA------GTLSTTPVD-TSTPMTT 2489
Query: 375 STGSNGLPSILQTCQIVGQPGLVLTQVAGTNTLPVTAPIALTVAGVPSQNNIQKSQVPAA 434
ST ++ P T + PI+ G +I S P A
Sbjct: 2490 STEASSSP---------------------TTAEDIVVPISTASEGSTLLTSIPVSTTPVA 2528
Query: 435 QPTAETKPAT 444
P A T T
Sbjct: 2529 SPEASTLSTT 2538
Score = 30.8 bits (68), Expect = 5.7
Identities = 58/347 (16%), Positives = 116/347 (33%), Gaps = 20/347 (5%)
Query: 160 EENAEQAESTEVSSSGISISKTPIMKMMKNKVENKRIAVHHNSVEDVPEEKENEIKPDRE 219
+ N S++ SSS ++ T + ++ + + +S E P +
Sbjct: 3543 DSNTFVTSSSQASSSPATLQVTTMRMSTPSEGSSSLTTMLLSSTYVTSSEASTPSTPSVD 3602
Query: 220 EIVENPSSSASESNTSTSIVNRIHPSTASTVVTPAAVLPGLAQVITAVSAQQNSNLIPKV 279
+S+ S S + V + ST S V TP ++P +T A S L
Sbjct: 3603 RSTPVTTSTQSNSTPTPPEVITLPMSTPSEVSTPLTIMPVSTTSVTISEAGTASTLPVDT 3662
Query: 280 LIPV---------------NSIPTYNAALDNNPLLLNTYNKFPYPTMSEITVLSAQAKYT 324
PV ++P + + + PL + T SE + LS + T
Sbjct: 3663 STPVITSTQVSSSPVTPEGTTMPIWTPSEGSTPLTTMPVST-TRVTSSEGSTLSTPSVVT 3721
Query: 325 EEQIKIWFSAQRLKHGVSWTPEEVEEARRKQFNGTVHTVPQTITVIPTHISTGSNGLPSI 384
+ S + + + + + + + T+ + T + + + +PS+
Sbjct: 3722 STPVTT--STEAISSSATLDSTTMSVSMPMEISTLGTTILVSTTPVTRFPESSTPSIPSV 3779
Query: 385 LQTCQI--VGQPGLVLTQVAGTNTLPVTAPIALTVAGVPSQNNIQKSQVPAAQPTAETKP 442
+ + + T + GT T+P++ + + P+ T T P
Sbjct: 3780 YTSMSMTTASEGSSSPTTLEGTTTMPMSTTSERSTLLTTVLISPISVMSPSEASTLSTPP 3839
Query: 443 ATAAVPTSQSVKHETALVNPDSFGIRAKKTKEQLAELKVSYLKNQFP 489
+ P S K + + + IR T E+ L + P
Sbjct: 3840 GDTSTPLLTSTKAGSFSIPAEVTTIRISITSERSTPLTTLLVSTTLP 3886
>gi|61969662 double homeobox A [Homo sapiens]
Length = 204
Score = 45.1 bits (105), Expect = 3e-04
Identities = 32/139 (23%), Positives = 57/139 (41%), Gaps = 10/139 (7%)
Query: 576 TAEQLRVLQASFLNSSVLTDEELNRLRAQTKLTRREIDAWFTEKKKSKALKEEKMEIDES 635
T EQL++L +F +L + I WF ++ ++ E+
Sbjct: 23 TEEQLKILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKRP----EA 78
Query: 636 NAGSSKEEAGETSPADESGAPKSGSTGKICKKT--PEQLHMLKSAFVRTQWPSPEEYDKL 693
S + G+ D+ G + C+ T QLH L AF++ +P + ++L
Sbjct: 79 ETLESSQSQGQ----DQPGVEFQSREARRCRTTYSASQLHTLIKAFMKNPYPGIDSREEL 134
Query: 694 AKESGLARTDIVSWFGDTR 712
AKE G+ + + WF + R
Sbjct: 135 AKEIGVPESRVQIWFQNRR 153
Score = 43.1 bits (100), Expect = 0.001
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 22/116 (18%)
Query: 298 LLLNTYNKFPYPTMSEITVLSAQAKYTEEQIKIWFSAQRLKHGVSWTPE----------- 346
+L+NT+N+ PYP + L+ + E +I+IWF +R +HG PE
Sbjct: 29 ILINTFNQKPYPGYATKQKLALEINTEESRIQIWFQNRRARHGFQKRPEAETLESSQSQG 88
Query: 347 --------EVEEARRKQFNGTVHTVPQTITVIPTHISTGSNGLPSILQTCQIVGQP 394
+ EARR + T ++ Q T+I + G+ S + + +G P
Sbjct: 89 QDQPGVEFQSREARRCR---TTYSASQLHTLIKAFMKNPYPGIDSREELAKEIGVP 141
>gi|239758038 PREDICTED: mucin 3A, cell surface associated, partial
[Homo sapiens]
Length = 909
Score = 41.2 bits (95), Expect = 0.004
Identities = 55/257 (21%), Positives = 94/257 (36%), Gaps = 41/257 (15%)
Query: 220 EIVENPSSSASESNTSTSIVNRIHPSTASTVVTPAAVLPGLAQVITAVSAQQNSNLIPKV 279
E + + S S S T+T T+ T VTP V P +++S
Sbjct: 328 ETTSHSTPSFSSSITTTETXXXXXXXTSETAVTPTPVTP------SSLSTD--------- 372
Query: 280 LIPVNSIPTYNAALDNNPLLLNTYNKFP--------YPTMSEITVLSAQAKYTEEQIKIW 331
IP S+ T + L T FP PT + I S + TE +
Sbjct: 373 -IPTTSLRTLTPSSVGTSTSLTTTTDFPSIPTDISTLPTRTHIISSSPSIQSTETSSLVG 431
Query: 332 FSAQRLKHGVSWTPEEVEEARRKQFNGTVHTVPQTITVIPTHISTGSNGLPSILQTCQIV 391
++ + V T E F+ ++ +P+T T P +++ + S T
Sbjct: 432 TTSPTMST-VRMTLRITENTPISSFSTSIVVIPETPTQTPPVLTSATGTQTSPAPTTVTF 490
Query: 392 GQ------------PGLVLTQVAGTNTLPVTAPIALTVAGVPSQNNIQKSQVPAAQPTAE 439
G P L+ + T+ +P+ + + T+ PS ++Q S ++ T E
Sbjct: 491 GSTDSSTSTLHTLTPSTALSTIVSTSQVPIPSTHSSTLQTTPSTPSLQTSLTSTSEFTTE 550
Query: 440 T----KPATAAVPTSQS 452
+ +T A+ TS S
Sbjct: 551 SFTRGSTSTNAILTSFS 567
Score = 35.4 bits (80), Expect = 0.23
Identities = 53/246 (21%), Positives = 87/246 (35%), Gaps = 29/246 (11%)
Query: 223 ENPSSSA---SESNTSTSIVNRIHPS---TASTVVTPAAVLPGLAQVITAVSAQQNSN-- 274
E PSSS + S T+T + PS + ST T + P +IT +S
Sbjct: 22 ETPSSSTPSFTSSITTTETTSHSTPSFTSSISTTETTSHSTPSFTSLITITETTSHSTPS 81
Query: 275 ---LIPKVLIPVNSIPTYNAALDNNPLLLNTYNKFPYPTMSEITVLSAQAKYTEEQIKIW 331
I P +S P+Y ++ T + P + T + T +
Sbjct: 82 YTTSITTTETPSHSTPSYTTSI--------TTTETPSHSTPSFTSSITTTETTSHSTPSF 133
Query: 332 FSAQRLKHGVSWTPEEVEEARRKQFNGTVHTVPQTITVIPTHISTGSNGLPSILQTCQIV 391
S+ R S++ + T H+ P IT I T T S+ PS +
Sbjct: 134 TSSIRTTETTSYSTPSFTSSNTIT-ETTSHSTPSYITSITT-TETPSSSTPSFSSS---- 187
Query: 392 GQPGLVLTQVAGTNTLPVTAPIALTVAGVPSQNNIQKSQVPAAQPTAETKPATAAVPTSQ 451
+ T+ +T T+ I T S + S + +T T+++ TS+
Sbjct: 188 ----ITTTETTSHSTPGFTSSITTTETTSHSTPSFTSSITTTETTSHDTPSFTSSITTSE 243
Query: 452 SVKHET 457
+ H T
Sbjct: 244 TPSHST 249
>gi|90652851 zinc finger transcription factor TRPS1 [Homo sapiens]
Length = 1294
Score = 40.8 bits (94), Expect = 0.006
Identities = 36/186 (19%), Positives = 74/186 (39%), Gaps = 26/186 (13%)
Query: 70 YECKYCTFQTPDLNMFTFHVDSEH--------------------PNVVLNSSYVCVECNF 109
++C C+F TPD+++ FH +S H +V + + C +C+F
Sbjct: 627 HQCHQCSFTTPDVDVLLFHYESVHESQASDVKQEANHLQGSDGQQSVKESKEHSCTKCDF 686
Query: 110 LTKRYDALSEHNLKYHPGEENFKLTMVKRNNQTIFEQTINDLTFDGSFVKEENAEQAEST 169
+T+ + +S H + H + + + + Q++ E F+ +E++ A
Sbjct: 687 ITQVEEEISRHYRRAHSCYKCRQCSFTAADTQSLLEH------FNTVHCQEQDITTANGE 740
Query: 170 EVSSSGISISKTPIMKMMKNKVENKRIAVHHNSVEDVPEEKENEIKPDREEIVENPSSSA 229
E + +I + P + + + E V + ++ E K +E V SSS
Sbjct: 741 EDGHAISTIKEEPKIDFRVYNLLTPDSKMGEPVSESVVKREKLEEKDGLKEKVWTESSSD 800
Query: 230 SESNTS 235
N +
Sbjct: 801 DLRNVT 806
Score = 34.3 bits (77), Expect = 0.52
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 8/89 (8%)
Query: 44 ESISSD--EEVHESVDSDNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSS 101
ES +SD +E + SD QQ+ K + C C F T + H H S
Sbjct: 651 ESQASDVKQEANHLQGSDGQQSVKESKEHSCTKCDFITQVEEEISRHYRRAH------SC 704
Query: 102 YVCVECNFLTKRYDALSEHNLKYHPGEEN 130
Y C +C+F +L EH H E++
Sbjct: 705 YKCRQCSFTAADTQSLLEHFNTVHCQEQD 733
>gi|21361183 paired-like homeodomain transcription factor 2 isoform
c [Homo sapiens]
Length = 324
Score = 40.8 bits (94), Expect = 0.006
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 5/121 (4%)
Query: 411 APIALTVAGVPSQNNIQKSQVPAAQPTAETKPATAAVPTSQSVKHETALVNPDSFGIRAK 470
A ++ G P + K ++ + + P A SQ K+E S R +
Sbjct: 34 AMASVLAPGQPRSLDSSKHRLEVHTISDTSSPEAAEKDKSQQGKNEDVGAEDPSKKKRQR 93
Query: 471 K-----TKEQLAELKVSYLKNQFPHDSEIIRLMKITGLTKGEIKKWFSDTRYNQRNSKSN 525
+ T +QL EL+ ++ +N++P S + T LT+ ++ WF + R R + N
Sbjct: 94 RQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERN 153
Query: 526 Q 526
Q
Sbjct: 154 Q 154
Score = 33.9 bits (76), Expect = 0.68
Identities = 36/188 (19%), Positives = 73/188 (38%), Gaps = 18/188 (9%)
Query: 302 TYNKFPYPTMSEITVLSAQAKYTEEQIKIWFSAQRLKHGVSWTPEEVEEARR---KQFNG 358
T+ + YP MS ++ TE ++++WF +R K ++ E + QFNG
Sbjct: 110 TFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNG 169
Query: 359 TVHTVPQTIT-----------VIPTHISTGS----NGLPSILQTCQIVGQPGLVLTQVAG 403
+ + +ST S N + + Q + P ++ ++
Sbjct: 170 LMQPYDDMYPGYSYNNWAAKGLTSASLSTKSFPFFNSMNVNPLSSQSMFSPPNSISSMSM 229
Query: 404 TNTLPVTAPIALTVAGVPSQNNIQKSQVPAAQPTAETKPATAAVPTSQSVKHETALVNPD 463
++++ +A + + + S NN+ P+ T A PT V +T +
Sbjct: 230 SSSMVPSAVTGVPGSSLNSLNNLNNLSSPSLNSAVPTPACPYAPPTPPYVYRDTCNSSLA 289
Query: 464 SFGIRAKK 471
S ++AK+
Sbjct: 290 SLRLKAKQ 297
Score = 33.1 bits (74), Expect = 1.2
Identities = 32/142 (22%), Positives = 54/142 (38%), Gaps = 21/142 (14%)
Query: 628 EKMEIDESNAGSSKEEAGETSPADESGAPKSGSTGKICKKTPEQLHMLKSAFVRTQWPSP 687
E E D+S G + E+ G P+ + + + T +QL L++ F R ++P
Sbjct: 66 EAAEKDKSQQGKN-EDVGAEDPSKKKRQRRQRT-----HFTSQQLQELEATFQRNRYPDM 119
Query: 688 EEYDKLAKESGLARTDIVSWFGDTRYAWKNGNLKWYYYYQSANSSSMNGLSSLRKRGRGR 747
+++A + L + WF + R W+ N + L K G G
Sbjct: 120 STREEIAVWTNLTEARVRVWFKNRRAKWR--------------KRERNQQAELCKNGFG- 164
Query: 748 PKGRGRGRPRGRPRGSKRINNW 769
P+ G +P NNW
Sbjct: 165 PQFNGLMQPYDDMYPGYSYNNW 186
>gi|42476164 POU class 2 homeobox 1 [Homo sapiens]
Length = 743
Score = 40.4 bits (93), Expect = 0.007
Identities = 42/160 (26%), Positives = 61/160 (38%), Gaps = 13/160 (8%)
Query: 309 PTMSEITVLSAQAKYTEEQIKIWFSAQRLKH------GVSWTPEEVEEARRKQFNGTVHT 362
PT EIT+++ Q +E I++WF +R K T +A V T
Sbjct: 404 PTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGGTSSSPIKAIFPSPTSLVAT 463
Query: 363 VPQTITVIPTHISTGSNGLPSILQTCQIVGQPGLVLTQVAGTNTLPVTAPIALTVAGVPS 422
P +T T S LP + G T T T+ TAP A + PS
Sbjct: 464 TPSLVTSSAATTLTVSPVLPLTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPS 523
Query: 423 QNNIQKSQVPAAQPTAETKPATAAVPTSQSVKHETALVNP 462
+ P+ +A T A++A TS + T L +P
Sbjct: 524 LS-------PSPSASASTSEASSASETSTTQTTSTPLSSP 556
Score = 33.9 bits (76), Expect = 0.68
Identities = 49/222 (22%), Positives = 77/222 (34%), Gaps = 29/222 (13%)
Query: 449 TSQSVKHETALVNPDSFGIRAKKTKEQLAE------LKVSYLKNQFPHDSEIIRLMKITG 502
+ S+ +AL +P G+ ++ K E L+ S+L+NQ P EI +
Sbjct: 358 SDSSLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLN 417
Query: 503 LTKGEIKKWFSDTRYNQRNSKSNQCLHLNNDSSTTIIIDSSDETTESPTVGTAQPKQSWN 562
+ K I+ WF + R ++ +N SS SPT A
Sbjct: 418 MEKEVIRVWFCNRRQKEK--------RINPPSSGGTSSSPIKAIFPSPTSLVAT------ 463
Query: 563 PFPDFTPQKFKEKTAEQLRVLQASFLNSSVLTDEELNRLRAQTKLTRREIDAWFTEKKKS 622
TP A L V L S+ +T+ + T + + T S
Sbjct: 464 -----TPSLVTSSAATTLTVSPVLPLTSAAVTNLSVTGTSDTTSNNTATVIS--TAPPAS 516
Query: 623 KALKEEKMEIDESNAGSSKE--EAGETSPADESGAPKSGSTG 662
A+ + S + S+ E A ETS + P S G
Sbjct: 517 SAVTSPSLSPSPSASASTSEASSASETSTTQTTSTPLSSPLG 558
>gi|31563348 paired box 3 isoform PAX3g [Homo sapiens]
Length = 403
Score = 40.4 bits (93), Expect = 0.007
Identities = 36/175 (20%), Positives = 72/175 (41%), Gaps = 10/175 (5%)
Query: 552 VGTAQPKQSWNPFPDFTPQKFKEKTAEQLR-VLQASFLNSSVLTDEELNRLRAQTKLTR- 609
+G ++PKQ P + +++K + ++ L +V + + + +++ R
Sbjct: 101 IGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRS 160
Query: 610 -----REIDAWFTEKKKSKALKEEKMEID---ESNAGSSKEEAGETSPADESGAPKSGST 661
E +A K+ ++ K+ K ID A + + + G ++ K
Sbjct: 161 KFGKGEEEEADLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQR 220
Query: 662 GKICKKTPEQLHMLKSAFVRTQWPSPEEYDKLAKESGLARTDIVSWFGDTRYAWK 716
T EQL L+ AF RT +P ++LA+ + L + WF + R W+
Sbjct: 221 RSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWR 275
Score = 32.7 bits (73), Expect = 1.5
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Query: 468 RAKKTKEQLAELKVSYLKNQFPHDSEIIRLMKITGLTKGEIKKWFSDTRYN-QRNSKSNQ 526
R T EQL EL+ ++ + +P L + LT+ ++ WFS+ R ++ + +NQ
Sbjct: 223 RTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQ 282
Query: 527 CLHLNNDSSTTIIIDSSDETTESPTVGTAQ 556
+ N+ +I T PT+ T Q
Sbjct: 283 LMAFNH------LIPGGFPPTAMPTLPTYQ 306
>gi|31563346 paired box 3 isoform PAX3h [Homo sapiens]
Length = 407
Score = 40.4 bits (93), Expect = 0.007
Identities = 36/175 (20%), Positives = 72/175 (41%), Gaps = 10/175 (5%)
Query: 552 VGTAQPKQSWNPFPDFTPQKFKEKTAEQLR-VLQASFLNSSVLTDEELNRLRAQTKLTR- 609
+G ++PKQ P + +++K + ++ L +V + + + +++ R
Sbjct: 101 IGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRS 160
Query: 610 -----REIDAWFTEKKKSKALKEEKMEID---ESNAGSSKEEAGETSPADESGAPKSGST 661
E +A K+ ++ K+ K ID A + + + G ++ K
Sbjct: 161 KFGKGEEEEADLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQR 220
Query: 662 GKICKKTPEQLHMLKSAFVRTQWPSPEEYDKLAKESGLARTDIVSWFGDTRYAWK 716
T EQL L+ AF RT +P ++LA+ + L + WF + R W+
Sbjct: 221 RSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWR 275
Score = 32.7 bits (73), Expect = 1.5
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Query: 468 RAKKTKEQLAELKVSYLKNQFPHDSEIIRLMKITGLTKGEIKKWFSDTRYN-QRNSKSNQ 526
R T EQL EL+ ++ + +P L + LT+ ++ WFS+ R ++ + +NQ
Sbjct: 223 RTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQ 282
Query: 527 CLHLNNDSSTTIIIDSSDETTESPTVGTAQ 556
+ N+ +I T PT+ T Q
Sbjct: 283 LMAFNH------LIPGGFPPTAMPTLPTYQ 306
>gi|31563344 paired box 3 isoform PAX3e [Homo sapiens]
Length = 505
Score = 40.4 bits (93), Expect = 0.007
Identities = 36/175 (20%), Positives = 72/175 (41%), Gaps = 10/175 (5%)
Query: 552 VGTAQPKQSWNPFPDFTPQKFKEKTAEQLR-VLQASFLNSSVLTDEELNRLRAQTKLTR- 609
+G ++PKQ P + +++K + ++ L +V + + + +++ R
Sbjct: 101 IGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRS 160
Query: 610 -----REIDAWFTEKKKSKALKEEKMEID---ESNAGSSKEEAGETSPADESGAPKSGST 661
E +A K+ ++ K+ K ID A + + + G ++ K
Sbjct: 161 KFGKGEEEEADLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQR 220
Query: 662 GKICKKTPEQLHMLKSAFVRTQWPSPEEYDKLAKESGLARTDIVSWFGDTRYAWK 716
T EQL L+ AF RT +P ++LA+ + L + WF + R W+
Sbjct: 221 RSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWR 275
Score = 32.7 bits (73), Expect = 1.5
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Query: 468 RAKKTKEQLAELKVSYLKNQFPHDSEIIRLMKITGLTKGEIKKWFSDTRYN-QRNSKSNQ 526
R T EQL EL+ ++ + +P L + LT+ ++ WFS+ R ++ + +NQ
Sbjct: 223 RTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQ 282
Query: 527 CLHLNNDSSTTIIIDSSDETTESPTVGTAQ 556
+ N+ +I T PT+ T Q
Sbjct: 283 LMAFNH------LIPGGFPPTAMPTLPTYQ 306
>gi|31563342 paired box 3 isoform PAX3d [Homo sapiens]
Length = 484
Score = 40.4 bits (93), Expect = 0.007
Identities = 36/175 (20%), Positives = 72/175 (41%), Gaps = 10/175 (5%)
Query: 552 VGTAQPKQSWNPFPDFTPQKFKEKTAEQLR-VLQASFLNSSVLTDEELNRLRAQTKLTR- 609
+G ++PKQ P + +++K + ++ L +V + + + +++ R
Sbjct: 101 IGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRS 160
Query: 610 -----REIDAWFTEKKKSKALKEEKMEID---ESNAGSSKEEAGETSPADESGAPKSGST 661
E +A K+ ++ K+ K ID A + + + G ++ K
Sbjct: 161 KFGKGEEEEADLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQR 220
Query: 662 GKICKKTPEQLHMLKSAFVRTQWPSPEEYDKLAKESGLARTDIVSWFGDTRYAWK 716
T EQL L+ AF RT +P ++LA+ + L + WF + R W+
Sbjct: 221 RSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWR 275
Score = 32.7 bits (73), Expect = 1.5
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Query: 468 RAKKTKEQLAELKVSYLKNQFPHDSEIIRLMKITGLTKGEIKKWFSDTRYN-QRNSKSNQ 526
R T EQL EL+ ++ + +P L + LT+ ++ WFS+ R ++ + +NQ
Sbjct: 223 RTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQ 282
Query: 527 CLHLNNDSSTTIIIDSSDETTESPTVGTAQ 556
+ N+ +I T PT+ T Q
Sbjct: 283 LMAFNH------LIPGGFPPTAMPTLPTYQ 306
>gi|31563340 paired box 3 isoform PAX3 [Homo sapiens]
Length = 479
Score = 40.4 bits (93), Expect = 0.007
Identities = 36/175 (20%), Positives = 72/175 (41%), Gaps = 10/175 (5%)
Query: 552 VGTAQPKQSWNPFPDFTPQKFKEKTAEQLR-VLQASFLNSSVLTDEELNRLRAQTKLTR- 609
+G ++PKQ P + +++K + ++ L +V + + + +++ R
Sbjct: 101 IGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRS 160
Query: 610 -----REIDAWFTEKKKSKALKEEKMEID---ESNAGSSKEEAGETSPADESGAPKSGST 661
E +A K+ ++ K+ K ID A + + + G ++ K
Sbjct: 161 KFGKGEEEEADLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQR 220
Query: 662 GKICKKTPEQLHMLKSAFVRTQWPSPEEYDKLAKESGLARTDIVSWFGDTRYAWK 716
T EQL L+ AF RT +P ++LA+ + L + WF + R W+
Sbjct: 221 RSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWR 275
Score = 32.7 bits (73), Expect = 1.5
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Query: 468 RAKKTKEQLAELKVSYLKNQFPHDSEIIRLMKITGLTKGEIKKWFSDTRYN-QRNSKSNQ 526
R T EQL EL+ ++ + +P L + LT+ ++ WFS+ R ++ + +NQ
Sbjct: 223 RTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQ 282
Query: 527 CLHLNNDSSTTIIIDSSDETTESPTVGTAQ 556
+ N+ +I T PT+ T Q
Sbjct: 283 LMAFNH------LIPGGFPPTAMPTLPTYQ 306
>gi|239743291 PREDICTED: mucin 3A, intestinal [Homo sapiens]
Length = 1486
Score = 40.4 bits (93), Expect = 0.007
Identities = 55/251 (21%), Positives = 96/251 (38%), Gaps = 42/251 (16%)
Query: 226 SSSASESNTSTSIVNRIHPSTASTVVTPAAVLPGLAQVITAVSAQQNSNLIPKVLIPVNS 285
S+ S +TST+ + H +T+ T VTP V P +++S IP S
Sbjct: 609 STIYSTVSTSTTAITS-HFTTSETAVTPTPVTP------SSLSTD----------IPTTS 651
Query: 286 IPTYNAALDNNPLLLNTYNKFP--------YPTMSEITVLSAQAKYTEEQIKIWFSAQRL 337
+ T + L T FP PT + I S + TE + ++ +
Sbjct: 652 LRTLTPSSVGTSTSLTTTTDFPSIPTDISTLPTRTHIISSSPSIQSTETSSLVGTTSPTM 711
Query: 338 KHGVSWTPEEVEEARRKQFNGTVHTVPQTITVIPTHISTGSNGLPSILQTCQIVGQ---- 393
V T E F+ ++ +P+T T P +++ + S T G
Sbjct: 712 ST-VRMTLRITENTPISSFSTSIVVIPETPTQTPPVLTSATGTQTSPAPTTVTFGSTDSS 770
Query: 394 --------PGLVLTQVAGTNTLPVTAPIALTVAGVPSQNNIQKSQVPAAQPTAET----K 441
P L+ + T+ +P+ + + T+ PS ++Q S ++ T E+
Sbjct: 771 TSTLHTLTPSTALSTIVSTSQVPIPSTHSSTLQTTPSTPSLQTSLTSTSEFTTESFTRGS 830
Query: 442 PATAAVPTSQS 452
+T A+ TS S
Sbjct: 831 TSTNAILTSFS 841
>gi|30410785 LIM homeobox protein 1 [Homo sapiens]
Length = 406
Score = 40.4 bits (93), Expect = 0.007
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 633 DESNAGSSKEEAGETSPADES-GAPKSGSTGKICKKTPEQLHMLKSAFVRTQWPSPEEYD 691
D +A S +EAG D++ GA + G I K QL LK+AF T P+ +
Sbjct: 155 DSESANVSDKEAGSNENDDQNLGAKRRGPRTTIKAK---QLETLKAAFAATPKPTRHIRE 211
Query: 692 KLAKESGLARTDIVSWFGDTR 712
+LA+E+GL I WF + R
Sbjct: 212 QLAQETGLNMRVIQVWFQNRR 232
>gi|142976638 sine oculis homeobox homolog 4 [Homo sapiens]
Length = 781
Score = 40.0 bits (92), Expect = 0.009
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 470 KKTKEQLAELKVSYLKNQFPHDSEIIRLMKITGLTKGEIKKWFSDTRYNQRNSKSNQ 526
+K++ L EL Y +N++P +E L KITGL+ ++ WF + R RN Q
Sbjct: 232 EKSRNALKEL---YKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSETQ 285
Score = 35.0 bits (79), Expect = 0.30
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 675 LKSAFVRTQWPSPEEYDKLAKESGLARTDIVSWFGDTRYAWKN 717
LK + + ++PSP E LAK +GL+ T + +WF + R +N
Sbjct: 238 LKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRN 280
Score = 32.7 bits (73), Expect = 1.5
Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 2/113 (1%)
Query: 742 KRGRGRPKGRGRGRPRGRPRGSKRINNWDRGPSLIKFKTGTA-ILKDYYLKHKFLNEQDL 800
+R RGRP G + R R + WD ++ FK + LK+ Y ++++ + +
Sbjct: 195 ERARGRPLG-AVDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEK 253
Query: 801 DELVNKSHMGYEQVREWFAERQRRSELGIELFEENEEEDEVIDDQEEDEEETD 853
L + + QV WF R++R E ++E + + E + D
Sbjct: 254 RHLAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSESDGNPSTEDESSKGHED 306
Score = 30.0 bits (66), Expect = 9.8
Identities = 83/449 (18%), Positives = 157/449 (34%), Gaps = 63/449 (14%)
Query: 178 ISKTPIMKMMKNKVENKR--IAVHHNSVEDVPEEKENEIKPDREEIVENPSSSASESNTS 235
+S T + KN+ + R S D E+E E++ +P SS+S+ T+
Sbjct: 262 LSLTQVSNWFKNRRQRDRNPSETQSKSESDGNPSTEDESSKGHEDLSPHPLSSSSDGITN 321
Query: 236 TSIVNRIHPSTASTVVTPAAVLPGLAQVITAVSAQQNSNLIPKVLIPVNSIPTYNAALDN 295
S+ + + P + G A+ +S + L+ L+P ++ P + L+
Sbjct: 322 LSLSSHMEPVYMQQI--------GNAK----ISLSSSGVLLNGSLVPASTSPVF---LNG 366
Query: 296 NPLLLNTYNKFPYPTMSEITVLSAQAKYTEEQIKIWFSAQRLKHGVSW------TPEEVE 349
N + ++ + V + QA S+ + +G+S T ++V+
Sbjct: 367 NSFIQGPSGVI----LNGLNVGNTQAVALNPP---KMSSNIVSNGISMTDILGSTSQDVK 419
Query: 350 EARRKQFNGTVHTVPQTITVIPTHISTGSNGLPSILQTCQIVGQPGLVLTQVAGTNTLPV 409
E + Q + T +P P ++ + ++ + + G + +
Sbjct: 420 EFKVLQSSANSATTTSYSPSVPV-------SFPGLIPSTEVKREGIQTVASQDGGSVVTF 472
Query: 410 TAPIALTVAG-VPSQNNIQKSQV--------PAAQPTAETKPATAAVPTSQSVKHETALV 460
T P+ + G V N+ SQ P P + + S S +
Sbjct: 473 TTPVQINQYGIVQIPNSGANSQFLNGSIGFSPLQLPPVSVAASQGNISVSSSTSDGSTFT 532
Query: 461 NPDSFGIRAKKTKEQLAELKVSYLKNQFPHDSEIIRLMKITGLTKGEIKKWFSDTRYNQR 520
+ + + K LA V Y P+ + I +K GL + + FS +
Sbjct: 533 SESTTVQQGKVFLSSLAPSAVVY---TVPNTGQTIGSVKQEGLERSLV---FSQLMPVNQ 586
Query: 521 NSKSNQCLHLNNDSSTTIIIDSSDETTESPTVG-TAQPKQSWNPF----------PDFTP 569
N++ N L N S + + +S SPT + P NP P P
Sbjct: 587 NAQVNANLSSENISGSGLHPLASSLVNVSPTHNFSLSPSTLLNPTELNRDIADSQPMSAP 646
Query: 570 QKFKEKTAEQLRVLQASFLNSSVLTDEEL 598
K A+ N S++T ++L
Sbjct: 647 VASKSTVTSVSNTNYATLQNCSLITGQDL 675
>gi|30061565 La ribonucleoprotein domain family member 2 isoform 2
[Homo sapiens]
Length = 522
Score = 39.7 bits (91), Expect = 0.012
Identities = 42/160 (26%), Positives = 67/160 (41%), Gaps = 26/160 (16%)
Query: 620 KKSKALKEEKMEIDESNAGSSKEEA-------GETSPADESGAPKSGSTGKICKKTPEQL 672
KK + KE++ ++++ + SKE GE DE+ + K P L
Sbjct: 24 KKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVSEDEAQSSNQRKRANKHKWVPLHL 83
Query: 673 HMLKSAFVRTQWPSPEEYDKLAKESGLARTDIVSWFGDTRYAWKNGNLKWYYYYQSANSS 732
+++S + P + E+ + + DTR +WK K
Sbjct: 84 DVVRSE--SQERPGSRNSSRCQPEANKPTHN--NRRNDTR-SWKRDREK---------RD 129
Query: 733 SMNGLSSLRK-----RGRGRPKGRGRGRPRGRPRGSKRIN 767
+ +SS+R RG R +GRGRGR RGR RG+ R+N
Sbjct: 130 DQDDVSSVRSEGGNIRGSFRGRGRGRGRGRGRGRGNPRLN 169
>gi|30061569 La ribonucleoprotein domain family member 2 isoform 3
[Homo sapiens]
Length = 358
Score = 39.7 bits (91), Expect = 0.012
Identities = 42/160 (26%), Positives = 67/160 (41%), Gaps = 26/160 (16%)
Query: 620 KKSKALKEEKMEIDESNAGSSKEEA-------GETSPADESGAPKSGSTGKICKKTPEQL 672
KK + KE++ ++++ + SKE GE DE+ + K P L
Sbjct: 24 KKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVSEDEAQSSNQRKRANKHKWVPLHL 83
Query: 673 HMLKSAFVRTQWPSPEEYDKLAKESGLARTDIVSWFGDTRYAWKNGNLKWYYYYQSANSS 732
+++S + P + E+ + + DTR +WK K
Sbjct: 84 DVVRSE--SQERPGSRNSSRCQPEANKPTHN--NRRNDTR-SWKRDREK---------RD 129
Query: 733 SMNGLSSLRK-----RGRGRPKGRGRGRPRGRPRGSKRIN 767
+ +SS+R RG R +GRGRGR RGR RG+ R+N
Sbjct: 130 DQDDVSSVRSEGGNIRGSFRGRGRGRGRGRGRGRGNPRLN 169
>gi|30061567 La ribonucleoprotein domain family member 2 isoform 1
[Homo sapiens]
Length = 914
Score = 39.7 bits (91), Expect = 0.012
Identities = 42/160 (26%), Positives = 67/160 (41%), Gaps = 26/160 (16%)
Query: 620 KKSKALKEEKMEIDESNAGSSKEEA-------GETSPADESGAPKSGSTGKICKKTPEQL 672
KK + KE++ ++++ + SKE GE DE+ + K P L
Sbjct: 24 KKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVSEDEAQSSNQRKRANKHKWVPLHL 83
Query: 673 HMLKSAFVRTQWPSPEEYDKLAKESGLARTDIVSWFGDTRYAWKNGNLKWYYYYQSANSS 732
+++S + P + E+ + + DTR +WK K
Sbjct: 84 DVVRSE--SQERPGSRNSSRCQPEANKPTHN--NRRNDTR-SWKRDREK---------RD 129
Query: 733 SMNGLSSLRK-----RGRGRPKGRGRGRPRGRPRGSKRIN 767
+ +SS+R RG R +GRGRGR RGR RG+ R+N
Sbjct: 130 DQDDVSSVRSEGGNIRGSFRGRGRGRGRGRGRGRGNPRLN 169
>gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 814
Score = 39.7 bits (91), Expect = 0.012
Identities = 36/125 (28%), Positives = 51/125 (40%), Gaps = 15/125 (12%)
Query: 634 ESNAGSSKEEAGETSPADESGAPKSGSTGKICKKTPEQLHMLKSAFVRTQWPSPEEYDKL 693
+ A ++K + T +SG P+ T T EQL L++ F T++ S E L
Sbjct: 640 QGTATAAKPKRKRTGSDSKSGKPRRARTAF----TYEQLVALENKFKATRYLSVCERLNL 695
Query: 694 AKESGLARTDIVSWFGDTRYAWKNGNLKWYYYYQSANSSSMNGLSSLRKRGRGRPKGRGR 753
A L T + WF + R WK N A++S+ G G G G G
Sbjct: 696 ALSLSLTETQVKIWFQNRRTKWKKQN-------PGADTSAPTGGGG----GPGPGAGPGT 744
Query: 754 GRPRG 758
G P G
Sbjct: 745 GLPGG 749
>gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 653
Score = 39.7 bits (91), Expect = 0.012
Identities = 36/125 (28%), Positives = 51/125 (40%), Gaps = 15/125 (12%)
Query: 634 ESNAGSSKEEAGETSPADESGAPKSGSTGKICKKTPEQLHMLKSAFVRTQWPSPEEYDKL 693
+ A ++K + T +SG P+ T T EQL L++ F T++ S E L
Sbjct: 75 QGTATAAKPKRKRTGSDSKSGKPRRARTAF----TYEQLVALENKFKATRYLSVCERLNL 130
Query: 694 AKESGLARTDIVSWFGDTRYAWKNGNLKWYYYYQSANSSSMNGLSSLRKRGRGRPKGRGR 753
A L T + WF + R WK N A++S+ G G G G G
Sbjct: 131 ALSLSLTETQVKIWFQNRRTKWKKQN-------PGADTSAPTGGGG----GPGPGAGPGT 179
Query: 754 GRPRG 758
G P G
Sbjct: 180 GLPGG 184
>gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]
Length = 411
Score = 39.7 bits (91), Expect = 0.012
Identities = 36/125 (28%), Positives = 51/125 (40%), Gaps = 15/125 (12%)
Query: 634 ESNAGSSKEEAGETSPADESGAPKSGSTGKICKKTPEQLHMLKSAFVRTQWPSPEEYDKL 693
+ A ++K + T +SG P+ T T EQL L++ F T++ S E L
Sbjct: 237 QGTATAAKPKRKRTGSDSKSGKPRRARTAF----TYEQLVALENKFKATRYLSVCERLNL 292
Query: 694 AKESGLARTDIVSWFGDTRYAWKNGNLKWYYYYQSANSSSMNGLSSLRKRGRGRPKGRGR 753
A L T + WF + R WK N A++S+ G G G G G
Sbjct: 293 ALSLSLTETQVKIWFQNRRTKWKKQN-------PGADTSAPTGGGG----GPGPGAGPGT 341
Query: 754 GRPRG 758
G P G
Sbjct: 342 GLPGG 346
>gi|195546902 suppressor of Ty 5 homolog isoform b [Homo sapiens]
Length = 1083
Score = 39.7 bits (91), Expect = 0.012
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 820 ERQRRSELGIELFEENEEEDEVIDDQEEDEEETDDSDTWEP--PRHVKRKLSKSD 872
+ +RRS G E EE E+E+E +++E DEEE ++ D P PRH L ++D
Sbjct: 27 DEERRSAAGSEKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPKKPRHGGFILDEAD 81
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.126 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,530,547
Number of Sequences: 37866
Number of extensions: 1703122
Number of successful extensions: 16777
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 293
Number of HSP's successfully gapped in prelim test: 336
Number of HSP's that attempted gapping in prelim test: 12200
Number of HSP's gapped (non-prelim): 3677
length of query: 873
length of database: 18,247,518
effective HSP length: 111
effective length of query: 762
effective length of database: 14,044,392
effective search space: 10701826704
effective search space used: 10701826704
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.