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Search of human proteins with 62460633
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|62460633 RNA-binding motif protein 16 [Homo sapiens]
(1271 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|62460633 RNA-binding motif protein 16 [Homo sapiens] 2580 0.0
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [... 682 0.0
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 671 0.0
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ... 648 0.0
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 88 6e-17
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 80 1e-14
gi|47132519 Ras association and pleckstrin homology domains 1 is... 77 8e-14
gi|160707881 formin 2 [Homo sapiens] 72 3e-12
gi|16554449 zonadhesin isoform 3 [Homo sapiens] 72 4e-12
gi|27881494 zonadhesin isoform 6 [Homo sapiens] 72 4e-12
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 70 2e-11
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 70 2e-11
gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo s... 70 2e-11
gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo s... 70 2e-11
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] 69 2e-11
gi|14670268 RD RNA-binding protein [Homo sapiens] 69 3e-11
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 69 4e-11
gi|24307919 small nuclear ribonucleoprotein 27kDa (U4/U6.U5) [Ho... 67 8e-11
gi|146134388 YLP motif containing 1 [Homo sapiens] 67 8e-11
gi|4508017 zinc finger protein 207 isoform a [Homo sapiens] 67 1e-10
gi|9558733 transformer-2 alpha [Homo sapiens] 67 1e-10
gi|4759098 splicing factor, arginine/serine-rich 10 [Homo sapiens] 67 1e-10
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 66 2e-10
gi|33620745 pre-mRNA cleavage complex II protein Pcf11 [Homo sap... 66 2e-10
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 65 4e-10
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 65 4e-10
gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain ... 65 5e-10
gi|163965366 nascent polypeptide-associated complex alpha subuni... 64 7e-10
gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo sap... 64 7e-10
gi|38683816 ankyrin repeat domain protein 17 isoform b [Homo sap... 64 7e-10
>gi|62460633 RNA-binding motif protein 16 [Homo sapiens]
Length = 1271
Score = 2580 bits (6688), Expect = 0.0
Identities = 1271/1271 (100%), Positives = 1271/1271 (100%)
Query: 1 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV
Sbjct: 1 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 120
PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 120
Query: 121 NVFKSEIIQPLLDMAAGIPPPVVTPVLASTTTAMSNTPGTPVTPVTPANVVQGLPDPWVS 180
NVFKSEIIQPLLDMAAGIPPPVVTPVLASTTTAMSNTPGTPVTPVTPANVVQGLPDPWVS
Sbjct: 121 NVFKSEIIQPLLDMAAGIPPPVVTPVLASTTTAMSNTPGTPVTPVTPANVVQGLPDPWVS 180
Query: 181 QITNTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSILQALDAGLVVQLQALTAQL 240
QITNTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSILQALDAGLVVQLQALTAQL
Sbjct: 181 QITNTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSILQALDAGLVVQLQALTAQL 240
Query: 241 TAAAAAANTLTPLEQGVSFNKKLMDRFDFGEDSEHSEEPKKEIPASQLSHVSESVNNSIF 300
TAAAAAANTLTPLEQGVSFNKKLMDRFDFGEDSEHSEEPKKEIPASQLSHVSESVNNSIF
Sbjct: 241 TAAAAAANTLTPLEQGVSFNKKLMDRFDFGEDSEHSEEPKKEIPASQLSHVSESVNNSIF 300
Query: 301 HQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFGSEHSASPSQGSSQQHFLEPEV 360
HQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFGSEHSASPSQGSSQQHFLEPEV
Sbjct: 301 HQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFGSEHSASPSQGSSQQHFLEPEV 360
Query: 361 NLDDSIDIQQQDMDIDEGQDGVEEEVFEQEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRS 420
NLDDSIDIQQQDMDIDEGQDGVEEEVFEQEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRS
Sbjct: 361 NLDDSIDIQQQDMDIDEGQDGVEEEVFEQEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRS 420
Query: 421 GSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLW 480
GSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLW
Sbjct: 421 GSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLW 480
Query: 481 VGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLSSGSYKIG 540
VGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLSSGSYKIG
Sbjct: 481 VGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLSSGSYKIG 540
Query: 541 SKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDDLEGFAEGGMIDQETVNTEWE 600
SKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDDLEGFAEGGMIDQETVNTEWE
Sbjct: 541 SKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDDLEGFAEGGMIDQETVNTEWE 600
Query: 601 TVKSSEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFP 660
TVKSSEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFP
Sbjct: 601 TVKSSEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFP 660
Query: 661 VSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTIPPVVPTSLVQPSL 720
VSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTIPPVVPTSLVQPSL
Sbjct: 661 VSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTIPPVVPTSLVQPSL 720
Query: 721 SMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDHQISS 780
SMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDHQISS
Sbjct: 721 SMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDHQISS 780
Query: 781 GENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPNVSSNSEILGVRPSNVSSSSGI 840
GENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPNVSSNSEILGVRPSNVSSSSGI
Sbjct: 781 GENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPNVSSNSEILGVRPSNVSSSSGI 840
Query: 841 IAAQPPNILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVPNTPGLLGTQ 900
IAAQPPNILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVPNTPGLLGTQ
Sbjct: 841 IAAQPPNILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVPNTPGLLGTQ 900
Query: 901 PPAGPQNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGPRFPLIQPGIPPQRGIPPPSVLDS 960
PPAGPQNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGPRFPLIQPGIPPQRGIPPPSVLDS
Sbjct: 901 PPAGPQNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGPRFPLIQPGIPPQRGIPPPSVLDS 960
Query: 961 ALHPPPRGPFPPGDIFSQPERPFLAPGRQSVDNVTNPEKRIPLGNDNIQQEGDRDYRFPP 1020
ALHPPPRGPFPPGDIFSQPERPFLAPGRQSVDNVTNPEKRIPLGNDNIQQEGDRDYRFPP
Sbjct: 961 ALHPPPRGPFPPGDIFSQPERPFLAPGRQSVDNVTNPEKRIPLGNDNIQQEGDRDYRFPP 1020
Query: 1021 IETRESISRPPPVDVRDVVGRPIDPREGPGRPPLDGRDHFGRPPVDIRENLVRPGIDHLG 1080
IETRESISRPPPVDVRDVVGRPIDPREGPGRPPLDGRDHFGRPPVDIRENLVRPGIDHLG
Sbjct: 1021 IETRESISRPPPVDVRDVVGRPIDPREGPGRPPLDGRDHFGRPPVDIRENLVRPGIDHLG 1080
Query: 1081 RRDHFGFNPEKPWGHRGDFDEREHRVLPVYGGPKGLHEERGRFRSGNYRFDPRSGPWNRG 1140
RRDHFGFNPEKPWGHRGDFDEREHRVLPVYGGPKGLHEERGRFRSGNYRFDPRSGPWNRG
Sbjct: 1081 RRDHFGFNPEKPWGHRGDFDEREHRVLPVYGGPKGLHEERGRFRSGNYRFDPRSGPWNRG 1140
Query: 1141 FGQEVHRDFDDRRRPWERQRDRDDRDFDFCREMNGNRLGRDRIQNTWVPPPHARVFDYFE 1200
FGQEVHRDFDDRRRPWERQRDRDDRDFDFCREMNGNRLGRDRIQNTWVPPPHARVFDYFE
Sbjct: 1141 FGQEVHRDFDDRRRPWERQRDRDDRDFDFCREMNGNRLGRDRIQNTWVPPPHARVFDYFE 1200
Query: 1201 GATSQRKGDNVPQVNGENTERHAQPPPIPVQNDPELYEKLTSSNEINKEKSDTVADIESE 1260
GATSQRKGDNVPQVNGENTERHAQPPPIPVQNDPELYEKLTSSNEINKEKSDTVADIESE
Sbjct: 1201 GATSQRKGDNVPQVNGENTERHAQPPPIPVQNDPELYEKLTSSNEINKEKSDTVADIESE 1260
Query: 1261 PVVESTETEGT 1271
PVVESTETEGT
Sbjct: 1261 PVVESTETEGT 1271
>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [Homo
sapiens]
Length = 1147
Score = 682 bits (1759), Expect = 0.0
Identities = 495/1278 (38%), Positives = 653/1278 (51%), Gaps = 261/1278 (20%)
Query: 1 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
M+AV FN EL+SL D KPPIS+AKM ITKAAIKAIK YKHVVQ VEKFI+KCKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 60
Query: 61 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 120
PGLYVIDSIVRQSRHQFG +KDVF PRFS NI +TFQ LY CP +DKSKIVRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 120
Query: 121 NVFKSEIIQPLLDMAAGIPPPVVTPVLASTTTAMSNTPGTPVTPVTPANV--VQGLPD-- 176
VFK EIIQPLLDMAAG T A ++N G+P PV ++ Q P+
Sbjct: 121 GVFKIEIIQPLLDMAAG------TSNAAPVAENVTNNEGSPPPPVKVSSEPPTQATPNSV 174
Query: 177 PWVSQITNTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSILQALDAGLVVQLQAL 236
P V Q+ ++D AAVAQ+ Q+ QGQQLQQ++QT Q Q KPQ ALD ++ Q+QA+
Sbjct: 175 PAVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQ-QPPKPQSP---ALDNAVMAQVQAI 230
Query: 237 TAQL----TAAAAAANTLTPLEQGVSFNKKLMDRFDFGEDSEHSEEPKKE---------- 282
TAQL T + P EQ +F+KKL+DRFD+ ++ E EE KKE
Sbjct: 231 TAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAP 290
Query: 283 -----------IPASQL-SHVSESVNNSIFHQIAEQLQQ------QNLEHLRQQLLEQQQ 324
+PA+ + S + F + +QQ QN++ + +++ QQ
Sbjct: 291 AAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQ 350
Query: 325 P----QKATPQDSQEGTFGSEHSASPSQGSSQQHFLEPE--VNLDDSIDIQQQDMDIDEG 378
Q P + Q FG +P Q + P V Q Q+ + +
Sbjct: 351 DPMHHQVPLPPNGQMPGFGL--LPTPPFPPMAQPVIPPTPPVQQPFQASFQAQNEPLTQK 408
Query: 379 QDGVEEEVFE---QEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRS 435
E EV + QE K+ +R ++ SRS SRSP++RRSRS S SR+ +HR RSRSRS
Sbjct: 409 PHQQEMEVEQPCIQEVKRHMSDNR-KSRSRSASRSPKRRRSRSGSRSRRSRHR-RSRSRS 466
Query: 436 RERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTN 495
R+R+R S RS S ERR RE+E+ER++KGLP ++ +T SVCSTTLWVGQ+DK+ TQQD+ +
Sbjct: 467 RDRRRHSPRSRSQERRDREKERERRQKGLPQVKPETASVCSTTLWVGQLDKRTTQQDVAS 526
Query: 496 LFEEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLSSGSYKIGSKVIKIAWALNKGVK 555
L EEFG IESINMIPPRGCAY+ MVHRQDA+RALQKLS G+YK+ K IKIAWALNKG+K
Sbjct: 527 LLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIK 586
Query: 556 TEYKQFWDVDLGVTYIPWEKVKVDDLEGFAEGGMIDQETVNTEWETVKSSEPVKETVQT- 614
+YKQ+WDV+LGVTYIPW+KVK ++LE F EGGM+D +T+N +W+ + +P E Q
Sbjct: 587 ADYKQYWDVELGVTYIPWDKVKPEELESFCEGGMLDSDTLNPDWKGI-PKKPENEVAQNG 645
Query: 615 ------TQSPTPVEKETVVTTQAEVFPPPVAM--LQIPV-APAVPTV-SLVPPAFPVSMP 664
T+ +P+ K V P P+ + Q+P P P V +L PPAF +
Sbjct: 646 GAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLG 705
Query: 665 VPPPGFS-----PIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTIPP--VVPTSLVQ 717
+PPPGF P PPPPFLR FNP PPGF+PP PPP+ PP +IPP P S+
Sbjct: 706 IPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPN 765
Query: 718 PSLS-MTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDH 776
+++ + +T KD+ G+ P V + AE + V
Sbjct: 766 STIAGINEDTTKDLSIGN-----------------PIPTVVSGARGNAESGDSV------ 802
Query: 777 QISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPNVSSNSEILGVRPSNVSS 836
+ S +P +N P VT +LG Q GV P V
Sbjct: 803 -----KMYGSAVPPAAPTNL-----PTPPVTQPVSLLGTQ-----------GVAPGPV-- 839
Query: 837 SSGIIAAQPPNILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVPNTPGL 896
+G+Q P S+GLLG PGL
Sbjct: 840 ------------------IGLQAP----STGLLGA---------------------RPGL 856
Query: 897 LGTQPPAGPQNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGPRFPLIQPGIPPQRGIPPPS 956
+ Q P G +PP + QR P MP + P ++ + P P P +PPP
Sbjct: 857 IPLQRPPG---MPPPHL--QRFPLMPPRPMPPHMMHRGPPPG--------PGGFAMPPPH 903
Query: 957 VLDSALHPPPRGPFPPGDIFSQPERPFLAPGRQSVDNVTNPEKRIPLGNDNIQQEGDRDY 1016
+ +GPFP P PF+ PG P P D QQ +
Sbjct: 904 GM--------KGPFP-------PHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQ 948
Query: 1017 RFPPIET-----RESISRPPPVDVRDVVGRPIDPREGPGRPPLDGRDHF--GRPPVDIRE 1069
+ P + ++ +PPP +P ++ P + D R F GR
Sbjct: 949 QQPQPQAPQQPQQQQQQQPPPSQ------QPPPTQQQPQQFRNDNRQQFNSGRDQ----- 997
Query: 1070 NLVRPGIDHLGRRDHFG---FNPEKPWGHRGDFDEREHRVLPVYGGPKGLHEERGRFRSG 1126
+ GRR FG N + +G+R D + +R +G
Sbjct: 998 -------ERFGRRS-FGNRVENDRERYGNRNDDRDNSNRDRREWG--------------- 1034
Query: 1127 NYRFDPRSGPWNRGFGQEVHRDFDDRRR--PWERQRDRDDRDFDFCREMNGNRLGRDRIQ 1184
R ++ HRD ++R R R R+RD RD + RE R G+++ +
Sbjct: 1035 -----------RRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEAR-GKEKPE 1082
Query: 1185 -------NTWVPPPHARV 1195
N V PP ++V
Sbjct: 1083 VTDRAGGNKTVEPPISQV 1100
Score = 39.7 bits (91), Expect = 0.019
Identities = 47/201 (23%), Positives = 77/201 (38%), Gaps = 20/201 (9%)
Query: 322 QQQPQKATPQDSQEGTFGSEHSASPSQGS--SQQHFLEPEVNLDDSIDIQQQDMDIDEGQ 379
QQQPQ PQ Q+ + PSQ +QQ +P+ +D+ +Q + Q
Sbjct: 948 QQQPQPQAPQQPQQQ---QQQQPPPSQQPPPTQQ---QPQQFRNDN----RQQFNSGRDQ 997
Query: 380 DGVEEEVFEQEAKKVAVRSRSRTHSRSRSRSPRK---RRSRSRSGSRKRKHRKRSRSRSR 436
+ F + R +R R S R+ RRS R R + R R S R
Sbjct: 998 ERFGRRSFGNRVENDRERYGNRNDDRDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHR 1057
Query: 437 ERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNL 496
+R+R S +R +R ++E + K P + + + + QV T +L
Sbjct: 1058 DRERD-----SRDRESRREKEEARGKEKPEVTDRAGGNKTVEPPISQVGNVDTASELEKG 1112
Query: 497 FEEFGQIESINMIPPRGCAYV 517
E ++ +P + V
Sbjct: 1113 VSEAAVLKPSEELPAEATSSV 1133
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 [Homo
sapiens]
Length = 1125
Score = 671 bits (1731), Expect = 0.0
Identities = 459/1098 (41%), Positives = 591/1098 (53%), Gaps = 189/1098 (17%)
Query: 1 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
M+AV FN EL+SL D KPPIS+AKM ITKAAIKAIK YKHVVQ VEKFI+KCKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 60
Query: 61 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 120
PGLYVIDSIVRQSRHQFG +KDVF PRFS NI +TFQ LY CP +DKSKIVRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 120
Query: 121 NVFKSEIIQPLLDMAAGIPPPVVTPVLASTTTAMSNTPGTPVTPVTPANV--VQGLPD-- 176
VFK EIIQPLLDMAAG T A ++N G+P PV ++ Q P+
Sbjct: 121 GVFKIEIIQPLLDMAAG------TSNAAPVAENVTNNEGSPPPPVKVSSEPPTQATPNSV 174
Query: 177 PWVSQITNTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSILQALDAGLVVQLQAL 236
P V Q+ ++D AAVAQ+ Q+ QGQQLQQ++QT Q Q KPQ ALD ++ Q+QA+
Sbjct: 175 PAVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQ-QPPKPQSP---ALDNAVMAQVQAI 230
Query: 237 TAQL----TAAAAAANTLTPLEQGVSFNKKLMDRFDFGEDSEHSEEPKKE---------- 282
TAQL T + P EQ +F+KKL+DRFD+ ++ E EE KKE
Sbjct: 231 TAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAP 290
Query: 283 -----------IPASQL-SHVSESVNNSIFHQIAEQLQQ------QNLEHLRQQLLEQQQ 324
+PA+ + S + F + +QQ QN++ + +++ QQ
Sbjct: 291 AAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQ 350
Query: 325 P----QKATPQDSQEGTFGSEHSASPSQGSSQQHFLEPE--VNLDDSIDIQQQDMDIDEG 378
Q P + Q FG +P Q + P V Q Q+ + +
Sbjct: 351 DPMHHQVPLPPNGQMPGFGL--LPTPPFPPMAQPVIPPTPPVQQPFQASFQAQNEPLTQK 408
Query: 379 QDGVEEEVFE---QEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRS 435
E EV + QE K+ +R ++ SRS SRSP++RRSRS S SR+ +HR RSRSRS
Sbjct: 409 PHQQEMEVEQPCIQEVKRHMSDNR-KSRSRSASRSPKRRRSRSGSRSRRSRHR-RSRSRS 466
Query: 436 RERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTN 495
R+R+R S RS S ERR RE+E+ER++KGLP ++ +T SVCSTTLWVGQ+DK+ TQQD+ +
Sbjct: 467 RDRRRHSPRSRSQERRDREKERERRQKGLPQVKPETASVCSTTLWVGQLDKRTTQQDVAS 526
Query: 496 LFEEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLSSGSYKIGSKVIKIAWALNKGVK 555
L EEFG IESINMIPPRGCAY+ MVHRQDA+RALQKLS G+YK+ K IKIAWALNKG+K
Sbjct: 527 LLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIK 586
Query: 556 TEYKQFWDVDLGVTYIPWEKVKVDDLEGFAEGGMIDQETVNTEWETVKSSEPVKETVQT- 614
+YKQ+WDV+LGVTYIPW+KVK ++LE F EGGM+D +T+N +W+ + +P E Q
Sbjct: 587 ADYKQYWDVELGVTYIPWDKVKPEELESFCEGGMLDSDTLNPDWKGI-PKKPENEVAQNG 645
Query: 615 ------TQSPTPVEKETVVTTQAEVFPPPVAM--LQIPV-APAVPTV-SLVPPAFPVSMP 664
T+ +P+ K V P P+ + Q+P P P V +L PPAF +
Sbjct: 646 GAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLG 705
Query: 665 VPPPGFS-----PIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTIPPVVPTSLVQPS 719
+PPPGF P PPPPFLR FNP PPGF+PP PPP+ PP +IPP + P+
Sbjct: 706 IPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPN 765
Query: 720 LSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDHQIS 779
L G G SV + SA+P N PT
Sbjct: 766 LVS--------GARGNAESGDSV--KMYGSAVPPAAPTNLPT------------------ 797
Query: 780 SGENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPNVSSNSEILGVRPSNV----S 835
P VT +LG Q GV P V +
Sbjct: 798 ------------------------PPVTQPVSLLGTQ-----------GVAPGPVIGLQA 822
Query: 836 SSSGIIAAQPPNILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVPNTPG 895
S+G++ A+P G++ +Q P G+ PP++ + PP P P
Sbjct: 823 PSTGLLGARP-------GLIPLQRPP--------GMPPPHLQR----FPLMPPR-PMPPH 862
Query: 896 LLGTQPPAGPQNL---PPLSIPNQRMPTMPMLDIRPGLIPQAPGP-------------RF 939
++ PP GP PP + P P +RPG +P GP +
Sbjct: 863 MMHRGPPPGPGGFAMPPPHGMKGPFPPHGPF--VRPGGMPGLGGPGPGPGGPEDRDGRQQ 920
Query: 940 PLIQPGIPPQRGIPPPSVLDSALHPPPRGPFPPGDIFSQPERPFLAPGRQSVDNVTNPEK 999
P QP PQ P PPP PP QP++ F RQ ++ + E+
Sbjct: 921 PPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQ--QQPQQ-FRNDNRQQFNSGRDQER 977
Query: 1000 --RIPLGNDNIQQEGDRD 1015
R GN + E DR+
Sbjct: 978 FGRRSFGN---RVENDRE 992
Score = 39.7 bits (91), Expect = 0.019
Identities = 47/201 (23%), Positives = 77/201 (38%), Gaps = 20/201 (9%)
Query: 322 QQQPQKATPQDSQEGTFGSEHSASPSQGS--SQQHFLEPEVNLDDSIDIQQQDMDIDEGQ 379
QQQPQ PQ Q+ + PSQ +QQ +P+ +D+ +Q + Q
Sbjct: 926 QQQPQPQAPQQPQQQ---QQQQPPPSQQPPPTQQ---QPQQFRNDN----RQQFNSGRDQ 975
Query: 380 DGVEEEVFEQEAKKVAVRSRSRTHSRSRSRSPRK---RRSRSRSGSRKRKHRKRSRSRSR 436
+ F + R +R R S R+ RRS R R + R R S R
Sbjct: 976 ERFGRRSFGNRVENDRERYGNRNDDRDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHR 1035
Query: 437 ERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNL 496
+R+R S +R +R ++E + K P + + + + QV T +L
Sbjct: 1036 DRERD-----SRDRESRREKEEARGKEKPEVTDRAGGNKTVEPPISQVGNVDTASELEKG 1090
Query: 497 FEEFGQIESINMIPPRGCAYV 517
E ++ +P + V
Sbjct: 1091 VSEAAVLKPSEELPAEATSSV 1111
>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 [Homo
sapiens]
Length = 1132
Score = 648 bits (1672), Expect = 0.0
Identities = 483/1278 (37%), Positives = 640/1278 (50%), Gaps = 276/1278 (21%)
Query: 1 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
M+AV FN EL+SL D KPPIS+AKM ITKAAIKAIK CKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIK---------------CKPEYKV 45
Query: 61 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 120
PGLYVIDSIVRQSRHQFG +KDVF PRFS NI +TFQ LY CP +DKSKIVRVLNLWQKN
Sbjct: 46 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 105
Query: 121 NVFKSEIIQPLLDMAAGIPPPVVTPVLASTTTAMSNTPGTPVTPVTPANV--VQGLPD-- 176
VFK EIIQPLLDMAAG T A ++N G+P PV ++ Q P+
Sbjct: 106 GVFKIEIIQPLLDMAAG------TSNAAPVAENVTNNEGSPPPPVKVSSEPPTQATPNSV 159
Query: 177 PWVSQITNTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSILQALDAGLVVQLQAL 236
P V Q+ ++D AAVAQ+ Q+ QGQQLQQ++QT Q Q KPQ ALD ++ Q+QA+
Sbjct: 160 PAVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQ-QPPKPQSP---ALDNAVMAQVQAI 215
Query: 237 TAQL----TAAAAAANTLTPLEQGVSFNKKLMDRFDFGEDSEHSEEPKKE---------- 282
TAQL T + P EQ +F+KKL+DRFD+ ++ E EE KKE
Sbjct: 216 TAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAP 275
Query: 283 -----------IPASQL-SHVSESVNNSIFHQIAEQLQQ------QNLEHLRQQLLEQQQ 324
+PA+ + S + F + +QQ QN++ + +++ QQ
Sbjct: 276 AAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQ 335
Query: 325 P----QKATPQDSQEGTFGSEHSASPSQGSSQQHFLEPE--VNLDDSIDIQQQDMDIDEG 378
Q P + Q FG +P Q + P V Q Q+ + +
Sbjct: 336 DPMHHQVPLPPNGQMPGFGL--LPTPPFPPMAQPVIPPTPPVQQPFQASFQAQNEPLTQK 393
Query: 379 QDGVEEEVFE---QEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRS 435
E EV + QE K+ +R ++ SRS SRSP++RRSRS S SR+ +HR RSRSRS
Sbjct: 394 PHQQEMEVEQPCIQEVKRHMSDNR-KSRSRSASRSPKRRRSRSGSRSRRSRHR-RSRSRS 451
Query: 436 RERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTN 495
R+R+R S RS S ERR RE+E+ER++KGLP ++ +T SVCSTTLWVGQ+DK+ TQQD+ +
Sbjct: 452 RDRRRHSPRSRSQERRDREKERERRQKGLPQVKPETASVCSTTLWVGQLDKRTTQQDVAS 511
Query: 496 LFEEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLSSGSYKIGSKVIKIAWALNKGVK 555
L EEFG IESINMIPPRGCAY+ MVHRQDA+RALQKLS G+YK+ K IKIAWALNKG+K
Sbjct: 512 LLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIK 571
Query: 556 TEYKQFWDVDLGVTYIPWEKVKVDDLEGFAEGGMIDQETVNTEWETVKSSEPVKETVQT- 614
+YKQ+WDV+LGVTYIPW+KVK ++LE F EGGM+D +T+N +W+ + +P E Q
Sbjct: 572 ADYKQYWDVELGVTYIPWDKVKPEELESFCEGGMLDSDTLNPDWKGI-PKKPENEVAQNG 630
Query: 615 ------TQSPTPVEKETVVTTQAEVFPPPVAM--LQIPV-APAVPTV-SLVPPAFPVSMP 664
T+ +P+ K V P P+ + Q+P P P V +L PPAF +
Sbjct: 631 GAETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLG 690
Query: 665 VPPPGFS-----PIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTIPP--VVPTSLVQ 717
+PPPGF P PPPPFLR FNP PPGF+PP PPP+ PP +IPP P S+
Sbjct: 691 IPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPN 750
Query: 718 PSLS-MTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDH 776
+++ + +T KD+ G+ P V + AE + V
Sbjct: 751 STIAGINEDTTKDLSIGN-----------------PIPTVVSGARGNAESGDSV------ 787
Query: 777 QISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPNVSSNSEILGVRPSNVSS 836
+ S +P +N P VT +LG Q GV P V
Sbjct: 788 -----KMYGSAVPPAAPTNL-----PTPPVTQPVSLLGTQ-----------GVAPGPV-- 824
Query: 837 SSGIIAAQPPNILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVPNTPGL 896
+G+Q P S+GLLG PGL
Sbjct: 825 ------------------IGLQAP----STGLLGA---------------------RPGL 841
Query: 897 LGTQPPAGPQNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGPRFPLIQPGIPPQRGIPPPS 956
+ Q P G +PP + QR P MP + P ++ + P P P +PPP
Sbjct: 842 IPLQRPPG---MPPPHL--QRFPLMPPRPMPPHMMHRGPPPG--------PGGFAMPPPH 888
Query: 957 VLDSALHPPPRGPFPPGDIFSQPERPFLAPGRQSVDNVTNPEKRIPLGNDNIQQEGDRDY 1016
+ +GPFP P PF+ PG P P D QQ +
Sbjct: 889 GM--------KGPFP-------PHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQ 933
Query: 1017 RFPPIET-----RESISRPPPVDVRDVVGRPIDPREGPGRPPLDGRDHF--GRPPVDIRE 1069
+ P + ++ +PPP +P ++ P + D R F GR
Sbjct: 934 QQPQPQAPQQPQQQQQQQPPPSQ------QPPPTQQQPQQFRNDNRQQFNSGRDQ----- 982
Query: 1070 NLVRPGIDHLGRRDHFG---FNPEKPWGHRGDFDEREHRVLPVYGGPKGLHEERGRFRSG 1126
+ GRR FG N + +G+R D + +R +G
Sbjct: 983 -------ERFGRRS-FGNRVENDRERYGNRNDDRDNSNRDRREWG--------------- 1019
Query: 1127 NYRFDPRSGPWNRGFGQEVHRDFDDRRR--PWERQRDRDDRDFDFCREMNGNRLGRDRIQ 1184
R ++ HRD ++R R R R+RD RD + RE R G+++ +
Sbjct: 1020 -----------RRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEAR-GKEKPE 1067
Query: 1185 -------NTWVPPPHARV 1195
N V PP ++V
Sbjct: 1068 VTDRAGGNKTVEPPISQV 1085
Score = 39.7 bits (91), Expect = 0.019
Identities = 47/201 (23%), Positives = 77/201 (38%), Gaps = 20/201 (9%)
Query: 322 QQQPQKATPQDSQEGTFGSEHSASPSQGS--SQQHFLEPEVNLDDSIDIQQQDMDIDEGQ 379
QQQPQ PQ Q+ + PSQ +QQ +P+ +D+ +Q + Q
Sbjct: 933 QQQPQPQAPQQPQQQ---QQQQPPPSQQPPPTQQ---QPQQFRNDN----RQQFNSGRDQ 982
Query: 380 DGVEEEVFEQEAKKVAVRSRSRTHSRSRSRSPRK---RRSRSRSGSRKRKHRKRSRSRSR 436
+ F + R +R R S R+ RRS R R + R R S R
Sbjct: 983 ERFGRRSFGNRVENDRERYGNRNDDRDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHR 1042
Query: 437 ERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNL 496
+R+R S +R +R ++E + K P + + + + QV T +L
Sbjct: 1043 DRERD-----SRDRESRREKEEARGKEKPEVTDRAGGNKTVEPPISQVGNVDTASELEKG 1097
Query: 497 FEEFGQIESINMIPPRGCAYV 517
E ++ +P + V
Sbjct: 1098 VSEAAVLKPSEELPAEATSSV 1118
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 1124
Score = 87.8 bits (216), Expect = 6e-17
Identities = 118/422 (27%), Positives = 160/422 (37%), Gaps = 82/422 (19%)
Query: 605 SEPVKETVQTTQSP--TPVEKETV-----VTTQAEVFPPPVAMLQIPVAP----AVPTVS 653
S+P + +Q + P TP K+ +++ P P PV P A P +
Sbjct: 270 SQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPA 329
Query: 654 LVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPP---TIPPV 710
+PP+ P++ P+P SP PP P+ PP P PP+ PP TIPP+
Sbjct: 330 TLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPI 389
Query: 711 -VPTSLVQPSLSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEPE-- 767
VP SL PSL P S LA S+L A +PT QA
Sbjct: 390 QVPHSLTSPSLQAPP-------------------SPLALSSLQATTSLGSPTLQATHSFL 430
Query: 768 EKVPHLIDHQISSGENTRSVIPNDISSNAAI-LGGQPPNVTSNSGILGVQRPNVSSNSEI 826
P ++S S P+ A + L PP TS S P VS S
Sbjct: 431 TMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPPLQTSLS-------PAVSPLSSP 483
Query: 827 LGVRPSNVSSSSGIIAAQPPNILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQ 886
L + P SS +A+ P +S I+ PP + SS +
Sbjct: 484 LTIHPLQALSS---LASHSPQAPLSSLIM---PPLETQSS------------------LA 519
Query: 887 PPNVPNTPGLLGTQPPAGPQNLPPLSIPNQRMPTMPMLDIRPGL-IPQAPGPRFPLIQPG 945
PP++ P L T P +NLP L+ P + + P+ P L P P P PL P
Sbjct: 520 PPSLQTPPASLTTPP---LENLPSLAPPPLQTASAPL--TTPHLETPPCPAP-CPLQAP- 572
Query: 946 IPPQRGIPPPSVLDSALHPPPRGP----FPP-GDIFSQPERPFLAPGRQSVDNVTNPEKR 1000
P PPP S PPP+ P PP + S P P P Q+ + P +
Sbjct: 573 -PSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQ 631
Query: 1001 IP 1002
P
Sbjct: 632 AP 633
Score = 62.4 bits (150), Expect = 3e-09
Identities = 116/477 (24%), Positives = 160/477 (33%), Gaps = 91/477 (19%)
Query: 617 SPTPVEKETVVTTQAEVFPPPVAM---LQIPVAPAVPTVSLVPPAFPVSMPVPPPGFSPI 673
+P P++ + T + PP LQ P +P ++ PP P S+ PPP P
Sbjct: 542 APPPLQTASAPLTTPHLETPPCPAPCPLQAPPSP----LTTPPPETPSSIATPPPQAPPA 597
Query: 674 PPPPFLRASFNPSQPPPGFMPPPVPPPV-VPPPTIPPVVPTS-LVQPSLSMTPETVKDVG 731
P L+ +P P PP PP + +PP PP P S + P + +P+ +
Sbjct: 598 LASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALA 657
Query: 732 FGSLVI-----PGGSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDHQISSGENTRS 786
L P V + + A P + P QA P P L
Sbjct: 658 VHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPL------------Q 705
Query: 787 VIPNDISSNAAILGGQPPNVTSNSGILGVQRPNVSSNSEILGVRPSNVSSSSGIIAAQPP 846
V P+ +S PP Q P + + L V PS +S +A PP
Sbjct: 706 VPPSPPASPPMSPSATPP----------PQAPPPLA-APPLQVPPSPPASPPMSPSATPP 754
Query: 847 NILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVPNTPGLLGTQPPAGPQ 906
+ PP LL P +P + P ++P +P L PP P
Sbjct: 755 PRV---------PP-------LLAAPPLQVPPS------PPASLPMSP--LAKPPPQAPP 790
Query: 907 NL--PPLSIPNQRMPTMPMLDIRPGLIPQAPGPRFPLIQPGIPPQRG----------IPP 954
L PPL Q +P+ P PG P +P P+ PP + +PP
Sbjct: 791 ALATPPL----QALPSPPA--SFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPP 844
Query: 955 PSVLDSALHPPPRGPFPPGDIFSQPERPFLA--------PGRQSVDNVTNPEKRIPLGND 1006
L P R P P D R LA P R ++ P+ +
Sbjct: 845 SPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSA 904
Query: 1007 NIQQEGDRDYRFPPIETRESISRPPPVDVRDVVGRPIDPREGPGRPPLDGRDHFGRP 1063
E R Y P + PP D P GP PPL R G P
Sbjct: 905 TSTPEELRGYDSGP---EGGAAASPPPDAELAACHPAAWSRGPA-PPLAFRGAPGAP 957
Score = 61.6 bits (148), Expect = 5e-09
Identities = 104/413 (25%), Positives = 136/413 (32%), Gaps = 63/413 (15%)
Query: 607 PVKETVQTTQSPTPVEKETVVTTQAEVFP-PPVAMLQIPVAPAVPTVSLVPP-AFPVSMP 664
P ET + +P P + + + P PP++ L P P P +PP P S P
Sbjct: 579 PPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATP-PPQAPPXLALPPLQAPPSPP 637
Query: 665 VPPPGFSPIPPPP----------FLRASFNPSQPPPGFMP--PPVPPPVVPPPTIPPVVP 712
PP SP+ P L+A F+P PP P PP PPV P T P P
Sbjct: 638 ASPP-LSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAP 696
Query: 713 TSLVQPSLSMTPETVKDVGFGSLVIPGGSVASNLATSAL---PAGNVFNAPTKQAEPEEK 769
SL P L + P P LA L P+ + A P +
Sbjct: 697 PSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPR 756
Query: 770 VPHLIDHQISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPNVSSNSEILGV 829
VP L+ V P+ +S +PP Q P + + +
Sbjct: 757 VPPLL------AAPPLQVPPSPPASLPMSPLAKPP----------PQAPPALATPPLQAL 800
Query: 830 RPSNVSSSSGIIAAQPPNILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQPPN 889
PS +S G P L S + P + + L +PP+ P + L Q P
Sbjct: 801 -PSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTL---QAPR 856
Query: 890 VPNTPG------------LLGTQPPAGPQNLP--PLSIPNQRMPTMPMLDIRPGLIPQAP 935
P TPG L PP P P LS P+ + L
Sbjct: 857 RPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDS 916
Query: 936 GPRFPLIQPGIPPQRGIPPPSVLDSALHPP--PRGPFPPGDIFSQPERPFLAP 986
GP PPP +A HP RGP PP P P P
Sbjct: 917 GPE--------GGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWP 961
Score = 54.7 bits (130), Expect = 6e-07
Identities = 42/124 (33%), Positives = 54/124 (43%), Gaps = 12/124 (9%)
Query: 605 SEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFPVSMP 664
S PV+ SP PV +QA PP +A + V P+ P PP P + P
Sbjct: 670 SPPVQAPFSPPASP-PVSPSATPPSQA---PPSLAAPPLQVPPSPPAS---PPMSPSATP 722
Query: 665 VPPPGFSPIPPPPFLRASFNPSQPP--PGFMPPPVPPPVV--PPPTIPPVVPTSLVQPSL 720
PP P+ PP P+ PP P PPP PP++ PP +PP P SL L
Sbjct: 723 -PPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPL 781
Query: 721 SMTP 724
+ P
Sbjct: 782 AKPP 785
Score = 53.9 bits (128), Expect = 9e-07
Identities = 91/423 (21%), Positives = 152/423 (35%), Gaps = 42/423 (9%)
Query: 653 SLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPP-----PTI 707
SL A P+S P + P RA +PSQP P + PP V PP P +
Sbjct: 241 SLSSSATPLSSPARSGPSARGTP----RAPAHPSQPKPKGLQALRPPQVTPPRKDAAPAL 296
Query: 708 PPVVPTSLVQPSLSMT------PETVKDVGFGSLVIPGGSVASNL-----ATSALPAGNV 756
P+ + L PS S T P + + P +A+ L + SA P+
Sbjct: 297 GPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQT 356
Query: 757 FNAPTKQAEPEEKVPHLIDHQISSGENTRSV----IPNDISSNAAILGGQPPNVTSNSGI 812
+P P + P + + + + +++ +P+ ++S + P ++S
Sbjct: 357 LPSP-PATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQAT 415
Query: 813 LGVQRPNVSSNSEILGVRPSNVSSSSGIIAAQPPNILNNSGILGIQPPSVSNSSGLLGVL 872
+ P + + L + P +S ++P + +S L P S+ S L L
Sbjct: 416 TSLGSPTLQATHSFLTMSPRQTQASL-TSPSRPASTPPDSPPLQ-APLSLPASPPLQTSL 473
Query: 873 PPNIPNNSGLVGVQPPNVPNTPGLLGTQPPAGPQNLPPLSIPNQRMPTMPMLDIRPGLIP 932
P + S + + P ++ Q P +PPL + P P L P +
Sbjct: 474 SPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAP--PSLQTPPASLT 531
Query: 933 QAPGPRFPLIQPGIPPQRGIPPPSVLDSALHPPPRGPFPPGDIFSQPERPFLAPGRQSVD 992
P P + P PP + P PP P P P P P ++
Sbjct: 532 TPPLENLPSLAP--PPLQTASAPLTTPHLETPPCPAPCP----LQAPPSPLTTPPPETPS 585
Query: 993 NVTNPEKRIPLGNDNIQQEGDRDYRFPPIETRESISRPPPVDVRDVVGRPID-PREGPGR 1051
++ P + P + +G PP+ ++ PPP + P+ P P
Sbjct: 586 SIATPPPQAPPALASPPLQG---LPSPPL---SPLATPPPQAPPXLALPPLQAPPSPPAS 639
Query: 1052 PPL 1054
PPL
Sbjct: 640 PPL 642
Score = 52.4 bits (124), Expect = 3e-06
Identities = 89/367 (24%), Positives = 129/367 (35%), Gaps = 73/367 (19%)
Query: 636 PPVAMLQIPVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPP---PPFLRASFNPSQPPPGF 692
PP++ L P A +++ P S P PP +P P PP ++ PSQ PP
Sbjct: 640 PPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSL 699
Query: 693 MPPPV--------PPPVVPPPTIPPVVPTSLVQPSLSMTPETVKDVGFGSLVIPGGSVAS 744
PP+ PP+ P T PP P L P L + P P V
Sbjct: 700 AAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPP 759
Query: 745 NLATSAL-----PAGNVFNAPTKQAEPEEKVPHLIDHQISSGENTRSVIPND--ISSNAA 797
LA L P ++ +P + P+ P L + + + + P S +A+
Sbjct: 760 LLAAPPLQVPPSPPASLPMSPLAKPPPQAP-PALATPPLQALPSPPASFPGQAPFSPSAS 818
Query: 798 I----LGGQPPNVTSNSGILGVQRPNVSSNSEILGVRPSNVSSSSGIIAAQPPNILNNSG 853
+ L PP Q P V + + +L V PS +S + +PP ++
Sbjct: 819 LPMSPLATPPP-----------QAPPVLA-APLLQVPPSPPASPTLQAPRRPPTPGPDTS 866
Query: 854 ILGIQ-----------PPSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVPNTPGLLGTQPP 902
+ G + PPS S SS L G P++ +S P + + P
Sbjct: 867 VSGPRLTLALAPGPPPPPSRSPSSTLSG---PDLAGHSSSATSTPEELRG----YDSGPE 919
Query: 903 AGPQNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGPRFPLIQPGIPPQRGIPPPSVLDSAL 962
G PP P + P + P P PL G P G P P
Sbjct: 920 GGAAASPP--------PDAELAACHPAAWSRGPAP--PLAFRGAP---GAPLP------- 959
Query: 963 HPPPRGP 969
PP GP
Sbjct: 960 WPPATGP 966
Score = 50.1 bits (118), Expect = 1e-05
Identities = 59/226 (26%), Positives = 82/226 (36%), Gaps = 24/226 (10%)
Query: 602 VKSSEPVKETVQTTQSPTPVEKETVVTTQAEVFP-PPVAMLQIPVAPAVPTVS------- 653
V S P + + +P P + +V P PP + P A P V
Sbjct: 706 VPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPP 765
Query: 654 -LVPPAFPVSMPV-----PPPGFSPIPPPPFLRASFNPSQPPPGFMP------PPVPPPV 701
VPP+ P S+P+ PPP P P L+A +P PG P P+ P
Sbjct: 766 LQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLA 825
Query: 702 VPPPTIPPVVPTSLVQ--PSLSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNA 759
PPP PPV+ L+Q PS +P T++ P SV+ T AL G
Sbjct: 826 TPPPQAPPVLAAPLLQVPPSPPASP-TLQAPRRPPTPGPDTSVSGPRLTLALAPGPP-PP 883
Query: 760 PTKQAEPEEKVPHLIDHQISSGENTRSVIPNDISSNAAILGGQPPN 805
P++ P L H S+ + D PP+
Sbjct: 884 PSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPD 929
Score = 42.0 bits (97), Expect = 0.004
Identities = 87/403 (21%), Positives = 135/403 (33%), Gaps = 70/403 (17%)
Query: 681 ASFNPSQPPPGFMPP-PVPPPVVPPPTIPPVVPTSLVQPSLSMTPETVKDVGFGSLVIP- 738
A+ P+ PG + P P P PPP P + ++ P + G G IP
Sbjct: 13 AARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPE 72
Query: 739 ----------GGSVASNLATSALPAGNVFNA-PTKQAEP-------------------EE 768
G+ + N A+ +G A P K P ++
Sbjct: 73 SAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQK 132
Query: 769 KVPHLIDHQISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGI----------LGVQRP 818
+ + ++ G+ T + + +S+ A P T + + +G+ RP
Sbjct: 133 GLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRP 192
Query: 819 NVSSNSEILGVRP-SNVSSSSGIIAAQPPNILNN--SGILGIQPPSVSNSSGLLGVLPPN 875
S+ P +VSS+S +P S G+Q P+ + S P +
Sbjct: 193 APSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSS--SATPLS 250
Query: 876 IPNNSGLVGVQPPNVPNTPGLLGTQP-PAGPQNLPPLSIPNQRMPTMPMLDIRPGLIPQA 934
P SG P P P +QP P G Q L P + R P L
Sbjct: 251 SPARSGPSARGTPRAPAHP----SQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLAT 306
Query: 935 PGPRFPLIQPGIPPQRG-------IPPPSVLDSALHPPPRGPFPPGDIFSQPERPFLAPG 987
P P +P PP +PP L + L P P P + + P P P
Sbjct: 307 PSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPP-ATPP 365
Query: 988 RQSVDNVTNPEKRIPLGNDNIQQEGDRDYRFPPIETRESISRP 1030
Q+ ++T P + P I PPI+ S++ P
Sbjct: 366 SQAPPSMTTPPMQAPPSLQTI----------PPIQVPHSLTSP 398
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 80.1 bits (196), Expect = 1e-14
Identities = 109/430 (25%), Positives = 156/430 (36%), Gaps = 43/430 (10%)
Query: 594 TVNTEWETVKSSEPVKETVQTTQSP-----TPVEKETVVTTQAEVFPPPVAMLQIPVAPA 648
TV ++ ++ + S + SP +P E V Q+ P A Q AP
Sbjct: 623 TVYSDSQSSQQSVMLGSLADAAPSPAQCVCSPPVSEGPVLPQS--LPSLGAYQQPTAAPG 680
Query: 649 VPTVSLVPPAFPVSM----PVPPPGFSPIPPPPFLRASFNPSQP-PPGFMPPPVPPPVVP 703
+P S+ PA P S+ P P F+P+ PPP P QP PPG PPP+ P
Sbjct: 681 LPVGSVPAPACPPSLQQHFPDPAMSFAPVLPPPSTPMPTGPGQPAPPGQQPPPLAQPTPL 740
Query: 704 PPTIPP--VVPTSLVQPSLSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPT 761
P + P VVP V P L VG + + P L P + P
Sbjct: 741 PQVLAPQPVVPLQPVPPHLPPYLAPASQVGAPAQLKP-------LQMPQAPLQPLAQVPP 793
Query: 762 KQAEPEEKVPHLIDHQISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPNVS 821
Q P VP + ++ + +P+ A + PP S + IL +
Sbjct: 794 -QMPPIPVVPPITP--LAGIDGLPPALPD--LPTATVPPVPPPQYFSPAVILPSLAAPLP 848
Query: 822 SNSEILGVRPSNVSSSSGIIAAQPPNILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSG 881
S L ++ + G A P + P+ + LL V PP + S
Sbjct: 849 PASPALPLQAVKLPHPPGAPLAMPCRTI---------VPNAPATIPLLAVAPPGVAALS- 898
Query: 882 LVGVQPPNVPNTPGLLGTQPPAGPQNLPPL---SIPNQRM-PTMPMLDIRPGLIPQAPGP 937
+ +P P P P ++PP ++ N R P P L +P L PQ P
Sbjct: 899 -IHSAVAQLPGQPVYPAAFPQMAPTDVPPSPHHTVQNMRATPPQPALPPQPTLPPQPVLP 957
Query: 938 RFPLI--QPGIPPQRGIPPPSVLDSALHPPPRGPFPPGDIFSQPERPFLAPGRQSVDNVT 995
P + QP +PPQ PP VL PP+ PP P +
Sbjct: 958 PQPTLPPQPVLPPQPTRPPQPVLPPQPMLPPQPVLPPQPALPVRPEPLQPHLPEQAAPAA 1017
Query: 996 NPEKRIPLGN 1005
P +I LG+
Sbjct: 1018 TPGSQILLGH 1027
Score = 40.0 bits (92), Expect = 0.014
Identities = 109/468 (23%), Positives = 157/468 (33%), Gaps = 68/468 (14%)
Query: 610 ETVQTTQSPTPVEKETVVTTQAEVFPP-PVAMLQIPVAPA----VPTVSLVPPAFPVSMP 664
E + +Q+ PV ++ V+ T F PVA P AP +P SL P A S P
Sbjct: 1289 EESRQSQANAPVYQQNVLHTGKRWFIICPVAEHPAPEAPESSPPLPLSSLPPEASQDSAP 1348
Query: 665 VPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTIPPV--VPTSLVQPSLSM 722
S P FL + SQ P PP PP P+ PPV +P P+ S
Sbjct: 1349 YKDQ-LSSKEQPSFLASQQLLSQAGPS--NPPGAPPAPLAPSSPPVTALPQDGAAPATST 1405
Query: 723 TPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDHQISSGE 782
PE P AS P G T Q E L + G
Sbjct: 1406 MPE------------PASGTASQAGGPGTPQGLTSELETSQPLAETHEAPLAVQPLVVGL 1453
Query: 783 NTRSVIPNDISSNAAILGGQP--PNVTSNSGILGVQRPNVSSNSEILGVRPSNVSSSSG- 839
+ P S+ A +P P S G +P + + +L VS ++
Sbjct: 1454 APCTPAPEAASTRDASAPREPLPPPAPEPSPHSGTPQPALGQPAPLLPAAVGAVSLATSQ 1513
Query: 840 --------IIAAQPPNILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVP 891
+ QPP+ L + G PP V + L + + +VP
Sbjct: 1514 LPSPPLGPTVPPQPPSALESDG--EGPPPRVGFVDSTIKSLDEKLRTL-----LYQEHVP 1566
Query: 892 NTPGLLGTQPPAGPQN--LPPLSIPNQRMPTMPMLDIRPGLIPQAPGPRFPLIQPGIPPQ 949
+ GT G ++ L PL P ++ G + P P+ + +
Sbjct: 1567 TSSASAGTPVEVGDRDFTLEPLR------GDQPRSEVCGGDLALPPVPK-----EAVSGR 1615
Query: 950 RGIPPPSVLDSALHPPPRGPFPPGDIFSQPERP-------FLAPGRQSVDN---VTNPEK 999
+P P V S L P G S + GRQ + V + +
Sbjct: 1616 VQLPQPLVEKSELAPTRGAVMEQGTSSSMTAESSPRSMLGYDRDGRQVASDSHVVPSVPQ 1675
Query: 1000 RIPLGNDNIQQEG-DRDYRFPPIETRESISRPPPVDVRDVVGRPIDPR 1046
+P + E DRD E ES + PPP D+ V G+ P+
Sbjct: 1676 DVPAFVRPARVEPTDRDGG----EAGESSAEPPPSDMGTVGGQASHPQ 1719
Score = 39.7 bits (91), Expect = 0.019
Identities = 55/203 (27%), Positives = 74/203 (36%), Gaps = 32/203 (15%)
Query: 617 SPTPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPP 676
SP + T PP + PV P PT +PP PV PP P PP
Sbjct: 927 SPHHTVQNMRATPPQPALPPQPTLPPQPVLPPQPT---LPP-----QPVLPP--QPTRPP 976
Query: 677 PFLRASFNPSQPPPGFMPPPVPPPVVPPPTIPPVVPTSLVQPSLSMTPETVKDVGF-GSL 735
P PP +P P PV+PP PV P L QP L PE GS
Sbjct: 977 -------QPVLPPQPMLP---PQPVLPPQPALPVRPEPL-QPHL---PEQAAPAATPGSQ 1022
Query: 736 VIPGG------SVASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDHQISSGENTRSVIP 789
++ G VA+ + T +P V + P + P L+ SS + +
Sbjct: 1023 ILLGHPAPYAVDVAAQVPTVPVPPAAVLSPPLPEV-LLPAAPELLPQFPSSLATVSASVQ 1081
Query: 790 NDISSNAAILGGQPPNVTSNSGI 812
+ + A +L P + GI
Sbjct: 1082 SVPTQTATLLPPANPPLPGGPGI 1104
Score = 35.0 bits (79), Expect = 0.46
Identities = 43/167 (25%), Positives = 60/167 (35%), Gaps = 22/167 (13%)
Query: 611 TVQTTQS--PTPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFPVSMPVPPP 668
TVQ ++ P P V PP + PV P PT P P M P P
Sbjct: 931 TVQNMRATPPQPALPPQPTLPPQPVLPPQPTLPPQPVLPPQPTRPPQPVLPPQPMLPPQP 990
Query: 669 GFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTI------PPVVPTSLVQPSLSM 722
+PP P L P QP +P P P I P V + P++ +
Sbjct: 991 ---VLPPQPALPVRPEPLQP---HLPEQAAPAATPGSQILLGHPAPYAVDVAAQVPTVPV 1044
Query: 723 TPETVKDVGFGSLVIPGG-----SVASNLATSALPAGNVFNAPTKQA 764
P V +++P S+LAT + +V + PT+ A
Sbjct: 1045 PPAAVLSPPLPEVLLPAAPELLPQFPSSLAT---VSASVQSVPTQTA 1088
>gi|47132519 Ras association and pleckstrin homology domains 1 isoform
1 [Homo sapiens]
Length = 1250
Score = 77.4 bits (189), Expect = 8e-14
Identities = 103/401 (25%), Positives = 147/401 (36%), Gaps = 85/401 (21%)
Query: 672 PIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTIPPVVPTSLVQPSLSMTPETVKDVG 731
P+ P P + + SQP P PPP PPP PPP PP P + ++ G
Sbjct: 608 PLSPQPKIVTPYTASQPSPPLPPPPPPPPPPPPPPPPPPPP---------LPSQSAPSAG 658
Query: 732 FGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDHQISSGENTRSVIPND 791
+ + S + L ++ +G +F PT P ++ Q SV P
Sbjct: 659 SAAPMFVKYSTITRLQNASQHSGALFKPPT---------PPVMQSQ--------SVKPQI 701
Query: 792 ISSNAAILGGQPPNVTSNSGILGVQRPNVSSNSEILGVRPSNVSSSSGIIAAQPP--NIL 849
+ ++ PP P + S + ++P+ + S +A PP I
Sbjct: 702 LVPPNGVVPPPPP-----------PPPPPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIH 750
Query: 850 NNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVPNTPGLLGTQPPAGPQNLP 909
I + PP+ + LPP P LV + P T + TQ A P P
Sbjct: 751 QVQHITQVAPPTPPPPPPIPAPLPPQAPPKP-LVTIPAPTSTKTVAPVVTQ-AAPPTPTP 808
Query: 910 PLSIPNQRMPTMPMLDIRPGLIPQAPGPRFPLIQPGIPPQRGI---PPPSVLD------- 959
P+ P ++ P P I P P P P+ P +P Q+ PPPS L
Sbjct: 809 PVP-PAKKQPAFPASYIP----PSPPTPPVPVPPPTLPKQQSFCAKPPPSPLSPVPSVVK 863
Query: 960 --SALHPPPRGPFPPGDIFSQPERPFLA-PGRQSVDNVTNPEK----RIPLGNDNIQQEG 1012
++ PPP P PP + SQP +P A QS V K IP+ + +
Sbjct: 864 QIASQFPPP--PTPPA-MESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPVPSPD----- 915
Query: 1013 DRDYRFPPIETRESISRPPPVDVRDVVGRPIDPREGPGRPP 1053
FPP S+ PPP P P P PP
Sbjct: 916 -----FPPPPPESSLVFPPP---------PPSPVPAPPPPP 942
Score = 56.6 bits (135), Expect = 1e-07
Identities = 113/505 (22%), Positives = 169/505 (33%), Gaps = 112/505 (22%)
Query: 605 SEPVKETVQTTQSPTPVEKETVVTTQAEVFPP--PVAMLQIPVAPAVPTVSLVPPAFPVS 662
SE K Q +S + E++ + PP P + P + P+ L PP P
Sbjct: 578 SEAWKRGTQLEES-SKARMESMNRPYTSLVPPLSPQPKIVTPYTASQPSPPLPPPPPPPP 636
Query: 663 MPVPPPGFSPIPPPP---------------FLRASF-----NPSQPPPGFMPPPVPP--- 699
P PPP P PPPP F++ S N SQ PP PP
Sbjct: 637 PPPPPP---PPPPPPLPSQSAPSAGSAAPMFVKYSTITRLQNASQHSGALFKPPTPPVMQ 693
Query: 700 -------------PVVPPPTIPPVVPTSLVQPSLSMTPETVKDVGFGSLVIPGGSVASNL 746
VVPPP PP PT PG ++A
Sbjct: 694 SQSVKPQILVPPNGVVPPPPPPPPPPT------------------------PGSAMAQLK 729
Query: 747 ATSALPAGNVFNAPTKQAEPEEKVPHLIDHQISSGENTRSVIPNDISSNAAILGGQPPNV 806
P+ F+AP P L HQ+ ++ V P I PP
Sbjct: 730 PAPCAPSLPQFSAPP---------PPLKIHQV---QHITQVAPPTPPPPPPIPAPLPPQA 777
Query: 807 TSNSGILGVQRPNVSSNSEILGVRPSNVSSSSGIIAAQPPNILNNSGILGIQPPSVSNSS 866
++ + P + + + + + + + A+ S I PPS
Sbjct: 778 PPKP-LVTIPAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASYI----PPSPPTPP 832
Query: 867 GLLGVLPPNIPNNSGLVGVQPPN----VPNTPGLLGTQPPAGPQNLPPLSIPNQRMPTMP 922
+ V PP +P PP+ VP+ + +Q P P PP M + P
Sbjct: 833 --VPVPPPTLPKQQSFCAKPPPSPLSPVPSVVKQIASQFP--PPPTPP------AMESQP 882
Query: 923 MLDIRPGLIPQAPG--PRFPLIQP-GIP-PQRGIPPPSVLDSALHPP------PRGPFPP 972
+ + + PQ+P P QP IP P PPP S + PP P P PP
Sbjct: 883 LKPVPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPPPPPSPVPAPPPPP 942
Query: 973 GDIFSQPERPFLAPGRQSVDNVTNPEKR---IPLGNDNIQQEGDRDYRFPPIETRESI-- 1027
S +PG+++ + K+ P N +I+ ++ P + +S+
Sbjct: 943 PPTASPTPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIKSSSGAEHPEPKRPSVDSLVS 1002
Query: 1028 SRPPPVDVRDVVGRPIDPREGPGRP 1052
PP + + P P +P
Sbjct: 1003 KFTPPAESGSPSKETLPPPAAPPKP 1027
Score = 56.6 bits (135), Expect = 1e-07
Identities = 78/329 (23%), Positives = 113/329 (34%), Gaps = 54/329 (16%)
Query: 607 PVKETVQTTQSPTPVEKETVVTTQ-AEVFPPPV---AMLQIPVAP--------AVPTVSL 654
P +++ P+P+ V Q A FPPP AM P+ P + P V
Sbjct: 841 PKQQSFCAKPPPSPLSPVPSVVKQIASQFPPPPTPPAMESQPLKPVPANVAPQSPPAVKA 900
Query: 655 VPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPP---------- 704
P P S+PVP P F PPPP F P P P PPP PPP P
Sbjct: 901 KPKWQPSSIPVPSPDFP--PPPPESSLVFPPPPPSPVPAPPPPPPPTASPTPDKSGSPGK 958
Query: 705 PTIPPVVPTSLVQPSLSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQA 764
T P P ++K P +L + P +P+K+
Sbjct: 959 KTSKTSSPGGKKPPPTPQRNSSIKSSSGAEHPEPKRPSVDSLVSKFTPPAE-SGSPSKET 1017
Query: 765 EPEEKVPHLIDHQISSGENTRSVIPND-ISSNAAILGGQ------------------PPN 805
P P SG N V+ +S+ A +L G+ PP
Sbjct: 1018 LPPPAAPPKPGKLNLSGVNLPGVLQQGCVSAKAPVLSGRGKDSVVEFPSPPSDSDFPPPP 1077
Query: 806 VTSNSGILGVQRP-----NVSSNSEILGVRPSNVSSSSGIIAAQPPNILNNSGILGIQPP 860
+ + ++ P N S ++ +P S S + A PP + +
Sbjct: 1078 PETELPLPPIEIPAVFSGNTSPKVAVVNPQPQQWSKMS-VKKAPPPTRPKRNDSTRLTQA 1136
Query: 861 SVSNSSGLLGVLP--PNIPNNSGLVGVQP 887
+S + V+P P P +S + VQP
Sbjct: 1137 EISEQPTMATVVPQVPTSPKSS--LSVQP 1163
Score = 47.8 bits (112), Expect = 7e-05
Identities = 108/474 (22%), Positives = 158/474 (33%), Gaps = 91/474 (19%)
Query: 606 EPVKETVQTTQSPTP---VEKETVVTTQAEVFPPPV---AMLQIPVAPAVPTVSLVPPAF 659
+P V +QS P V VV PPP AM Q+ AP P++
Sbjct: 685 KPPTPPVMQSQSVKPQILVPPNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPSL------- 737
Query: 660 PVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTIPPVVPTSLVQPS 719
P FS PPP + + +Q P PPP P P PP PP ++ P+
Sbjct: 738 --------PQFSAPPPPLKIHQVQHITQVAPPTPPPPPPIPAPLPPQAPPKPLVTIPAPT 789
Query: 720 LSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDHQIS 779
+ T + + T A P PT P +K P I
Sbjct: 790 STKT-------------------VAPVVTQAAPP-----TPTPPVPPAKKQPAFPASYIP 825
Query: 780 SGENTR--SVIPNDISSNAAILGGQPPN----VTSNSGILGVQRP----NVSSNSEILGV 829
T V P + + PP+ V S + Q P + S+ L
Sbjct: 826 PSPPTPPVPVPPPTLPKQQSFCAKPPPSPLSPVPSVVKQIASQFPPPPTPPAMESQPLKP 885
Query: 830 RPSNVS-SSSGIIAAQPPNILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQPP 888
P+NV+ S + A+P ++ + P S L+ PP P V PP
Sbjct: 886 VPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPPPPPSP-----VPAPPP 940
Query: 889 NVPNTPGLLGTQPPAGPQNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGPRFPLIQPGIPP 948
P T + + + S P + P P R I + G P P
Sbjct: 941 PPPPTASPTPDKSGSPGKKTSKTSSPGGKKP--PPTPQRNSSIKSSSGAEHP------EP 992
Query: 949 QRGIPPPSVLDSALHPPPRGPFPPGDIFSQPERPFLAPGRQSVDNVTNP--------EKR 1000
+R P L S PP P + P P PG+ ++ V P +
Sbjct: 993 KR--PSVDSLVSKFTPPAESGSPSKETLPPPAAP-PKPGKLNLSGVNLPGVLQQGCVSAK 1049
Query: 1001 IPL----GNDNIQQ----EGDRDYRFPPIETRESISRPPPVDVRDVVGRPIDPR 1046
P+ G D++ + D D+ PP ET + PP+++ V P+
Sbjct: 1050 APVLSGRGKDSVVEFPSPPSDSDFPPPPPETELPL---PPIEIPAVFSGNTSPK 1100
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 72.0 bits (175), Expect = 3e-12
Identities = 105/391 (26%), Positives = 137/391 (35%), Gaps = 62/391 (15%)
Query: 618 PTPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFPVSMPVPPP--GFSPIPP 675
P P+ TV T + P P + + P P PP +P PPP G +P
Sbjct: 880 PPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPP-----PPLPGAGIPPPPPLPGAGILPL 934
Query: 676 PPFLRASFNPSQPPPGFMPPPVPPPVVPPPTIPPVVPTSLVQPSLSMTPETVKDVGF-GS 734
PP A P P PG PP PP +PP +P + + P P + G
Sbjct: 935 PPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPP-----PPPLPGAGIPPP 989
Query: 735 LVIPGGSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDHQISSGENTRSVIPNDISS 794
+PG + LP + P P L +G +P
Sbjct: 990 PPLPGAGIP---PPPPLPGAGIPPPPPLPGAGIPPPPPL----PGAGIPPPPPLPG---- 1038
Query: 795 NAAILGGQPPNVTSNSGI--------LGVQRPNVSSNSEILGVRPSNVSSSSGIIAAQPP 846
G PP +GI G+ P + G+ P +GI PP
Sbjct: 1039 ----AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA---GIPPPPPLPGAGI---PPP 1088
Query: 847 NILNNSGI--------LGIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVPNTPGLLG 898
L +GI +GI PP +G+ PP +P G+ PP P PG
Sbjct: 1089 PPLPGAGIPPPPPLPGVGIPPPPPLPGAGI--PPPPPLPG----AGIPPP--PPLPGAGI 1140
Query: 899 TQPPAGPQ--NLPPLSIPNQRMPTMPMLDIRPGLIPQAPGPRFPLIQPGIPPQRGIPPPS 956
PP P+ PP +P +P P L G+ P P P + P P GIPPP
Sbjct: 1141 PPPPPLPRVGIPPPPPLPGAGIPPPPPLP-GAGIPPPPPLPGVGIPPPPPLPGVGIPPPP 1199
Query: 957 VLDSALHPPPRGPFPPGDIFSQPERPFLAPG 987
L A PPP P P I P P PG
Sbjct: 1200 PLPGAGIPPP-PPLPGMGIPPAPAPPLPPPG 1229
Score = 70.5 bits (171), Expect = 1e-11
Identities = 98/362 (27%), Positives = 129/362 (35%), Gaps = 65/362 (17%)
Query: 635 PPPVAMLQIPVAPAVPTVSLVPP----AFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPP 690
PPP+ IP+ P +P + PP + P P PG PPPP A P P P
Sbjct: 956 PPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP 1015
Query: 691 GF-MPPPVPPP---VVPPPTIPPV-VPTSLVQPSLSMTPETVKDVGFGSLVIPGGSVASN 745
G +PPP P P + PPP +P +P P + P +PG +
Sbjct: 1016 GAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPP---------LPGAGIPP- 1065
Query: 746 LATSALPAGNVFNAPTKQAEPEEKVPHLIDHQISSGENTRSVIPNDISSNAAILGGQPPN 805
LP + P P L +G +P +G PP
Sbjct: 1066 --PPPLPGAGIPPPPPLPGAGIPPPPPLP----GAGIPPPPPLPG--------VGIPPPP 1111
Query: 806 VTSNSGILGVQRPNVSSNSEILGVRPSNVSSSSGIIAAQPPNILNNSGI--------LGI 857
+GI P + G+ P +GI PP L GI GI
Sbjct: 1112 PLPGAGI--PPPPPLPG----AGIPPPPPLPGAGI---PPPPPLPRVGIPPPPPLPGAGI 1162
Query: 858 QPPSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVPNTPGLLGTQPPA---GPQNLPPLSIP 914
PP +G+ PP +P VG+ PP P PG+ G PP G PP +P
Sbjct: 1163 PPPPPLPGAGIPP--PPPLPG----VGIPPP--PPLPGV-GIPPPPPLPGAGIPPPPPLP 1213
Query: 915 NQRMPTMPMLDIRPGLIPQAPGPRFPLIQPGIPPQRG---IPPPSVLDSALHPPPRGPFP 971
+P P + P P P P+ P + PQ G +P P V P P G F
Sbjct: 1214 GMGIPPAPAPPLPPPGTGIPPPPLLPVSGPPLLPQVGSSTLPTPQVCGFLPPPLPSGLFG 1273
Query: 972 PG 973
G
Sbjct: 1274 LG 1275
Score = 68.9 bits (167), Expect = 3e-11
Identities = 112/419 (26%), Positives = 156/419 (37%), Gaps = 67/419 (15%)
Query: 583 GFAEGGMIDQETVNTEWETVKSSEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVAMLQ 642
G + G +++TE++T + P+P + T++ P + M+
Sbjct: 821 GQGQPGSQPPHSISTEFQTSHEHSVSSAFKNSCNIPSP---PPLPCTESSSSMPGLGMVP 877
Query: 643 IPVAPAVPTVSLVPPAFPVSMPVPPP--GFS--PIPPPPFLRASFNPSQPPP--GFMP-P 695
P P +P ++ VP ++P PPP G P PPPP A P P P G +P P
Sbjct: 878 -PPPPPLPGMT-VPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLP 935
Query: 696 PVPPPVVPPPTIPPVVPTSLVQPSLSMTPETVKDVGFG-SLVIPGGSVASNLATSALPAG 754
P+P +PP PP +P + + P P + G +PG + LP
Sbjct: 936 PLPGAGIPP---PPPLPGAAIPP-----PPPLPGAGIPLPPPLPGAGIP---PPPPLPGA 984
Query: 755 NVFNAPTKQAEPEEKVPHLIDHQISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGILG 814
+ P P L +G +P G PP +GI
Sbjct: 985 GIPPPPPLPGAGIPPPPPL----PGAGIPPPPPLPG--------AGIPPPPPLPGAGI-- 1030
Query: 815 VQRPNVSSNSEILGVRPSNVSSSSGIIAAQPPNILNNSGI--------LGIQPPSVSNSS 866
P + G+ P +GI PP L +GI GI PP +
Sbjct: 1031 PPPPPLPG----AGIPPPPPLPGAGI---PPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA 1083
Query: 867 GLLGVLPPNIPNNSGLVGVQPPNVPNTPGLLGTQPP---AGPQNLPPLSIPNQRMPTMPM 923
G+ PP +P G+ PP P PG +G PP G PP +P +P P
Sbjct: 1084 GI--PPPPPLPG----AGIPPP--PPLPG-VGIPPPPPLPGAGIPPPPPLPGAGIPPPPP 1134
Query: 924 LDIRPGLIPQAPGPRFPLIQPGIPPQRGIPPPSVLDSALHPPPRGPFPPGDIFSQPERP 982
L G+ P P PR + P P GIPPP L A PPP P P I P P
Sbjct: 1135 LP-GAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPP-PPLPGVGIPPPPPLP 1191
Score = 65.9 bits (159), Expect = 2e-10
Identities = 119/444 (26%), Positives = 154/444 (34%), Gaps = 96/444 (21%)
Query: 635 PPPVAMLQIPVAPAVPTVSLVPPAFPV--SMPVPPPGFSPIPPPPFLRASFNPSQPPPGF 692
PPP+ + + ++P + +VPP P M VP + IP PP L+ + PPP
Sbjct: 858 PPPLPCTES--SSSMPGLGMVPPPPPPLPGMTVPTLPSTAIPQPPPLQGT--EMLPPP-- 911
Query: 693 MPPPVPPPVVPPPTIPPVVPTSLVQPSLSMTPETVKDVGFGSLVIPGGSVASNLATSALP 752
PPP+P +PPP P +P G G L +P A LP
Sbjct: 912 -PPPLPGAGIPPP---PPLP------------------GAGILPLPPLPGAGIPPPPPLP 949
Query: 753 AGNVFNAPTKQAEPEEKVPHLIDHQISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGI 812
+ P P +P +P + G PP +GI
Sbjct: 950 GAAI---PPPPPLPGAGIP----------------LPPPLPG----AGIPPPPPLPGAGI 986
Query: 813 LGVQRPNVSSNSEILGVRPSNVSSSSGIIAAQPPNILNNSGI--------LGIQPPSVSN 864
P + G+ P +GI PP L +GI GI PP
Sbjct: 987 --PPPPPLPG----AGIPPPPPLPGAGI---PPPPPLPGAGIPPPPPLPGAGIPPPPPLP 1037
Query: 865 SSGLLGVLPPNIPNNSGLVGVQPPNVPNTPGLLGTQPPA---GPQNLPPLSIPNQRMPTM 921
+G+ PP +P G+ PP P PG G PP G PP +P +P
Sbjct: 1038 GAGIPP--PPPLPG----AGIPPP--PPLPGA-GIPPPPPLPGAGIPPPPPLPGAGIPPP 1088
Query: 922 PMLDIRPGLIPQAPGPRFPLIQPGIPPQRGIPPPSVLDSALHPPPRGPFPPGDIFSQPER 981
P L G+ P P P + P P GIPPP L A PPP P P I P
Sbjct: 1089 PPLP-GAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPP-PLPGAGIPPPPPL 1146
Query: 982 PFLA-PGRQSVDNVTNPEKRIPLGNDNIQQEGDRDYRFPPIETRESISRPPPVDVRDVVG 1040
P + P + P PL I PP + PPP + V
Sbjct: 1147 PRVGIPPPPPLPGAGIPPPP-PLPGAGI----------PPPPPLPGVGIPPPPPLPGVGI 1195
Query: 1041 RPIDPREGPGRPPLDGRDHFGRPP 1064
P P G G PP G PP
Sbjct: 1196 PPPPPLPGAGIPPPPPLPGMGIPP 1219
Score = 56.6 bits (135), Expect = 1e-07
Identities = 105/409 (25%), Positives = 136/409 (33%), Gaps = 67/409 (16%)
Query: 699 PPVVPPPTIPPVVPTSLVQPSLSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFN 758
PPV P PP P + P E V + + S + S P
Sbjct: 758 PPVDGLPGRPPCPPGAESGPQTKFCSEISLIVSPRRISVQLDSHQPTQSISQPPPPPSLL 817
Query: 759 APTKQAEPEEKVPHLI--------DHQISSGENTRSVIPN-------DISSNAAILGGQP 803
Q +P + PH I +H +SS IP+ + SS+ LG P
Sbjct: 818 WSAGQGQPGSQPPHSISTEFQTSHEHSVSSAFKNSCNIPSPPPLPCTESSSSMPGLGMVP 877
Query: 804 PNVTSNSGIL-------GVQRPNVSSNSEILGVRPSNVSSSSGIIAAQPPNILNNSGIL- 855
P G+ + +P +E+L P + + PP L +GIL
Sbjct: 878 PPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAG----IPPPPPLPGAGILP 933
Query: 856 -------GIQPPSVSNSSGL--------LGV-LPPNIPNNSGLVGVQPPNVPNTPGLLGT 899
GI PP + + G+ LPP +P G+ PP P PG G
Sbjct: 934 LPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPG----AGIPPP--PPLPGA-GI 986
Query: 900 QPPA---GPQNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGPRFPLIQPGIPPQRGIPPPS 956
PP G PP +P +P P L G+ P P P + P P GIPPP
Sbjct: 987 PPPPPLPGAGIPPPPPLPGAGIPPPPPLP-GAGIPPPPPLPGAGIPPPPPLPGAGIPPPP 1045
Query: 957 VLDSALHPPPRGPFPPGDIFSQPERPFLA-PGRQSVDNVTNPEKRIPLGNDNIQQEGDRD 1015
L A PPP P P I P P P + P PL I
Sbjct: 1046 PLPGAGIPPP-PPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP-PLPGAGI------- 1096
Query: 1016 YRFPPIETRESISRPPPVDVRDVVGRPIDPREGPGRPPLDGRDHFGRPP 1064
PP + PPP + P P G G PP G PP
Sbjct: 1097 ---PPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 1142
>gi|16554449 zonadhesin isoform 3 [Homo sapiens]
Length = 2812
Score = 71.6 bits (174), Expect = 4e-12
Identities = 82/392 (20%), Positives = 142/392 (36%), Gaps = 63/392 (16%)
Query: 591 DQETVNTEWETVKSSEPVKETVQTTQSPT----PVEKETVVTTQAEV--FPPPVAMLQIP 644
++ T++TE TV + EP T +TT S P EK ++ T + + P ++M +
Sbjct: 645 EKPTISTEKPTVPTEEPTTPTEETTTSMEEPVIPTEKPSIPTEKPSIPTEKPTISMEETI 704
Query: 645 VAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPP-----------PFLRASFNPSQPPPGFM 693
++ PT+S P P P P S I P P + + +P +P
Sbjct: 705 ISTEKPTISPEKPTIPTEKPTIPTEKSTISPEKPTTPTEKPTIPTEKPTISPEKPTTPTE 764
Query: 694 PPPVPP---------PVVPP--PTIP----------PVVPT-----SLVQPSLSM----- 722
P + P P +P PTIP P PT S +PS+ M
Sbjct: 765 KPTISPEKLTIPTEKPTIPTEKPTIPTEKPTISTEEPTTPTEETTISTEKPSIPMEKPTL 824
Query: 723 -TPETVKDV-----GFGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDH 776
T ET V L IP + +P +P K P EK+
Sbjct: 825 PTEETTTSVEETTISTEKLTIPMEKPTISTEKPTIPTEKPTISPEKLTIPTEKLT----- 879
Query: 777 QISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPNVSSNSEILGVRPSNVSS 836
I + + T + IS+ + + P ++ + ++P + + + + +S+
Sbjct: 880 -IPTEKPTIPIEETTISTEKLTIPTEKPTISPEKPTISTEKPTIPTEKPTIPTEETTIST 938
Query: 837 SSGIIAAQPPNILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVPNTPGL 896
I + P I + + P++S + IP + + P +P T L
Sbjct: 939 EKLTIPTEKPTISPEKLTIPTEKPTISTEKPTIPTEKLTIPTEKPTIPTEKPTIP-TEKL 997
Query: 897 LGTQPPAGPQNLPPLS--IPNQRMPTMPMLDI 926
+PP L+ + + P+ PM +
Sbjct: 998 TALRPPHPSPTATGLAALVMSPHAPSTPMTSV 1029
Score = 54.3 bits (129), Expect = 7e-07
Identities = 61/331 (18%), Positives = 118/331 (35%), Gaps = 27/331 (8%)
Query: 726 TVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDHQISSGENTR 785
T V G ++I G+ + P +P P E + IS+ + T
Sbjct: 518 TASVVAMGFILINPGTCPVKVLPELPPV-----SPVSSTGPSETTGLTENPTISTKKPTV 572
Query: 786 SVIPNDISSNAAILGGQPPNVTSNSGILGVQRPNVSSNSEILGVRPSNVSSSSGIIAAQP 845
S+ +++ + + P + + + ++P + S + + S I +
Sbjct: 573 SIEKPSVTTEKPTVPKEKPTIPTEKPTISTEKPTIPSEKPNMPSEKPTIPSEKPTILTEK 632
Query: 846 PNILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVPNTPGLLGTQPPAGP 905
P I + + + P++S + P P ++ P +P + T+ P+ P
Sbjct: 633 PTIPSEKPTIPSEKPTISTEKPTVPTEEPTTPTEETTTSMEEPVIPTEKPSIPTEKPSIP 692
Query: 906 QNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGPRFPLIQPGIPPQRGIPPPSVLDSALHPP 965
P +S+ + T +P + P+ P P +P IP ++ P + P
Sbjct: 693 TEKPTISMEETIISTE-----KPTISPEK--PTIPTEKPTIPTEKSTISP---EKPTTPT 742
Query: 966 PRGPFPPGDIFSQPERPFLAPGRQSV--DNVTNPEKR--IPLGNDNIQQEGDRDYRFPPI 1021
+ P PE+P + ++ + +T P ++ IP I E P I
Sbjct: 743 EKPTIPTEKPTISPEKPTTPTEKPTISPEKLTIPTEKPTIPTEKPTIPTEK------PTI 796
Query: 1022 ETRESISRPPPVDVRDVVGRPIDPREGPGRP 1052
T E + P + +P P E P P
Sbjct: 797 STEEPTT--PTEETTISTEKPSIPMEKPTLP 825
Score = 48.5 bits (114), Expect = 4e-05
Identities = 51/267 (19%), Positives = 98/267 (36%), Gaps = 24/267 (8%)
Query: 700 PVVPPPTIPPVVPTSLVQPS--LSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVF 757
PV P +PPV P S PS +T ++ I SV + T +
Sbjct: 535 PVKVLPELPPVSPVSSTGPSETTGLTENPTISTKKPTVSIEKPSVTTEKPTVPKEKPTI- 593
Query: 758 NAPTKQAEPEEKVPHLIDHQISSGENTRSVIPND---ISSNAAILGGQPPNVTSNSGILG 814
PT++ + P I + + + + IP++ I + + + P + S +
Sbjct: 594 --PTEKPTISTEKP-TIPSEKPNMPSEKPTIPSEKPTILTEKPTIPSEKPTIPSEKPTIS 650
Query: 815 VQRPNVSSNSEILGVRPSNVSSSSGIIAAQPPNILNNSGILGIQPPSVSNSSGLLGVLPP 874
++P V + + S +I + P+I + + P++S ++ P
Sbjct: 651 TEKPTVPTEEPTTPTEETTTSMEEPVIPTEKPSIPTEKPSIPTEKPTISMEETIISTEKP 710
Query: 875 NIPNNSGLVGVQPPNVPNTPGLLGTQPPAGPQNLPPLSIPNQR------MPTMPMLDIRP 928
I + + P +P + + P P P +IP ++ PT P +P
Sbjct: 711 TISPEKPTIPTEKPTIPTEKSTISPEKPTTPTEKP--TIPTEKPTISPEKPTTP--TEKP 766
Query: 929 GLIPQ-----APGPRFPLIQPGIPPQR 950
+ P+ P P +P IP ++
Sbjct: 767 TISPEKLTIPTEKPTIPTEKPTIPTEK 793
Score = 45.8 bits (107), Expect = 3e-04
Identities = 77/398 (19%), Positives = 127/398 (31%), Gaps = 90/398 (22%)
Query: 588 GMIDQETVNTEWETVKSSEPVKETVQTTQSPT-PVEKETVVTTQAEVFPPPVAMLQIPVA 646
G+ + T++T+ TV +P TT+ PT P EK T+ T +
Sbjct: 558 GLTENPTISTKKPTVSIEKPSV----TTEKPTVPKEKPTIPTEK---------------- 597
Query: 647 PAVPTVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPT 706
PT+S P P P P IP S+ P P P PT
Sbjct: 598 ---PTISTEKPTIPSEKPNMPSEKPTIP-----------SEKPTILTEKPTIPS--EKPT 641
Query: 707 IPPVVPTSLVQPSLSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEP 766
IP PT + T E P +++ +P K + P
Sbjct: 642 IPSEKPTISTEKPTVPTEEPTT---------PTEETTTSMEEPVIPTEKPSIPTEKPSIP 692
Query: 767 EEKVPHLIDHQISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPNVSSNSEI 826
EK IS I+ + P ++ + ++P + +
Sbjct: 693 TEKPT--------------------ISMEETIISTEKPTISPEKPTIPTEKPTIPTEKST 732
Query: 827 LGVRPSNVSSSSGIIAAQPPNILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQ 886
+ + I + P I + P++S + P IP + +
Sbjct: 733 ISPEKPTTPTEKPTIPTEKPTISPEKPTTPTEKPTISPEKLTIPTEKPTIPTEKPTIPTE 792
Query: 887 PPNV----PNTP---GLLGTQPPAGPQNLPPL------------SIPNQRMPTMPMLDIR 927
P + P TP + T+ P+ P P L +I +++ T+PM +
Sbjct: 793 KPTISTEEPTTPTEETTISTEKPSIPMEKPTLPTEETTTSVEETTISTEKL-TIPM--EK 849
Query: 928 PGLIPQAPGPRFPLIQPGIPPQRGIPPPSVLDSALHPP 965
P + + P P +P I P++ P L P
Sbjct: 850 PTISTEK--PTIPTEKPTISPEKLTIPTEKLTIPTEKP 885
>gi|27881494 zonadhesin isoform 6 [Homo sapiens]
Length = 2721
Score = 71.6 bits (174), Expect = 4e-12
Identities = 82/392 (20%), Positives = 142/392 (36%), Gaps = 63/392 (16%)
Query: 591 DQETVNTEWETVKSSEPVKETVQTTQSPT----PVEKETVVTTQAEV--FPPPVAMLQIP 644
++ T++TE TV + EP T +TT S P EK ++ T + + P ++M +
Sbjct: 645 EKPTISTEKPTVPTEEPTTPTEETTTSMEEPVIPTEKPSIPTEKPSIPTEKPTISMEETI 704
Query: 645 VAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPP-----------PFLRASFNPSQPPPGFM 693
++ PT+S P P P P S I P P + + +P +P
Sbjct: 705 ISTEKPTISPEKPTIPTEKPTIPTEKSTISPEKPTTPTEKPTIPTEKPTISPEKPTTPTE 764
Query: 694 PPPVPP---------PVVPP--PTIP----------PVVPT-----SLVQPSLSM----- 722
P + P P +P PTIP P PT S +PS+ M
Sbjct: 765 KPTISPEKLTIPTEKPTIPTEKPTIPTEKPTISTEEPTTPTEETTISTEKPSIPMEKPTL 824
Query: 723 -TPETVKDV-----GFGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDH 776
T ET V L IP + +P +P K P EK+
Sbjct: 825 PTEETTTSVEETTISTEKLTIPMEKPTISTEKPTIPTEKPTISPEKLTIPTEKLT----- 879
Query: 777 QISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPNVSSNSEILGVRPSNVSS 836
I + + T + IS+ + + P ++ + ++P + + + + +S+
Sbjct: 880 -IPTEKPTIPIEETTISTEKLTIPTEKPTISPEKPTISTEKPTIPTEKPTIPTEETTIST 938
Query: 837 SSGIIAAQPPNILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVPNTPGL 896
I + P I + + P++S + IP + + P +P T L
Sbjct: 939 EKLTIPTEKPTISPEKLTIPTEKPTISTEKPTIPTEKLTIPTEKPTIPTEKPTIP-TEKL 997
Query: 897 LGTQPPAGPQNLPPLS--IPNQRMPTMPMLDI 926
+PP L+ + + P+ PM +
Sbjct: 998 TALRPPHPSPTATGLAALVMSPHAPSTPMTSV 1029
Score = 54.3 bits (129), Expect = 7e-07
Identities = 61/331 (18%), Positives = 118/331 (35%), Gaps = 27/331 (8%)
Query: 726 TVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDHQISSGENTR 785
T V G ++I G+ + P +P P E + IS+ + T
Sbjct: 518 TASVVAMGFILINPGTCPVKVLPELPPV-----SPVSSTGPSETTGLTENPTISTKKPTV 572
Query: 786 SVIPNDISSNAAILGGQPPNVTSNSGILGVQRPNVSSNSEILGVRPSNVSSSSGIIAAQP 845
S+ +++ + + P + + + ++P + S + + S I +
Sbjct: 573 SIEKPSVTTEKPTVPKEKPTIPTEKPTISTEKPTIPSEKPNMPSEKPTIPSEKPTILTEK 632
Query: 846 PNILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVPNTPGLLGTQPPAGP 905
P I + + + P++S + P P ++ P +P + T+ P+ P
Sbjct: 633 PTIPSEKPTIPSEKPTISTEKPTVPTEEPTTPTEETTTSMEEPVIPTEKPSIPTEKPSIP 692
Query: 906 QNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGPRFPLIQPGIPPQRGIPPPSVLDSALHPP 965
P +S+ + T +P + P+ P P +P IP ++ P + P
Sbjct: 693 TEKPTISMEETIISTE-----KPTISPEK--PTIPTEKPTIPTEKSTISP---EKPTTPT 742
Query: 966 PRGPFPPGDIFSQPERPFLAPGRQSV--DNVTNPEKR--IPLGNDNIQQEGDRDYRFPPI 1021
+ P PE+P + ++ + +T P ++ IP I E P I
Sbjct: 743 EKPTIPTEKPTISPEKPTTPTEKPTISPEKLTIPTEKPTIPTEKPTIPTEK------PTI 796
Query: 1022 ETRESISRPPPVDVRDVVGRPIDPREGPGRP 1052
T E + P + +P P E P P
Sbjct: 797 STEEPTT--PTEETTISTEKPSIPMEKPTLP 825
Score = 48.5 bits (114), Expect = 4e-05
Identities = 51/267 (19%), Positives = 98/267 (36%), Gaps = 24/267 (8%)
Query: 700 PVVPPPTIPPVVPTSLVQPS--LSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVF 757
PV P +PPV P S PS +T ++ I SV + T +
Sbjct: 535 PVKVLPELPPVSPVSSTGPSETTGLTENPTISTKKPTVSIEKPSVTTEKPTVPKEKPTI- 593
Query: 758 NAPTKQAEPEEKVPHLIDHQISSGENTRSVIPND---ISSNAAILGGQPPNVTSNSGILG 814
PT++ + P I + + + + IP++ I + + + P + S +
Sbjct: 594 --PTEKPTISTEKP-TIPSEKPNMPSEKPTIPSEKPTILTEKPTIPSEKPTIPSEKPTIS 650
Query: 815 VQRPNVSSNSEILGVRPSNVSSSSGIIAAQPPNILNNSGILGIQPPSVSNSSGLLGVLPP 874
++P V + + S +I + P+I + + P++S ++ P
Sbjct: 651 TEKPTVPTEEPTTPTEETTTSMEEPVIPTEKPSIPTEKPSIPTEKPTISMEETIISTEKP 710
Query: 875 NIPNNSGLVGVQPPNVPNTPGLLGTQPPAGPQNLPPLSIPNQR------MPTMPMLDIRP 928
I + + P +P + + P P P +IP ++ PT P +P
Sbjct: 711 TISPEKPTIPTEKPTIPTEKSTISPEKPTTPTEKP--TIPTEKPTISPEKPTTP--TEKP 766
Query: 929 GLIPQ-----APGPRFPLIQPGIPPQR 950
+ P+ P P +P IP ++
Sbjct: 767 TISPEKLTIPTEKPTIPTEKPTIPTEK 793
Score = 45.8 bits (107), Expect = 3e-04
Identities = 77/398 (19%), Positives = 127/398 (31%), Gaps = 90/398 (22%)
Query: 588 GMIDQETVNTEWETVKSSEPVKETVQTTQSPT-PVEKETVVTTQAEVFPPPVAMLQIPVA 646
G+ + T++T+ TV +P TT+ PT P EK T+ T +
Sbjct: 558 GLTENPTISTKKPTVSIEKPSV----TTEKPTVPKEKPTIPTEK---------------- 597
Query: 647 PAVPTVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPT 706
PT+S P P P P IP S+ P P P PT
Sbjct: 598 ---PTISTEKPTIPSEKPNMPSEKPTIP-----------SEKPTILTEKPTIPS--EKPT 641
Query: 707 IPPVVPTSLVQPSLSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEP 766
IP PT + T E P +++ +P K + P
Sbjct: 642 IPSEKPTISTEKPTVPTEEPTT---------PTEETTTSMEEPVIPTEKPSIPTEKPSIP 692
Query: 767 EEKVPHLIDHQISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPNVSSNSEI 826
EK IS I+ + P ++ + ++P + +
Sbjct: 693 TEKPT--------------------ISMEETIISTEKPTISPEKPTIPTEKPTIPTEKST 732
Query: 827 LGVRPSNVSSSSGIIAAQPPNILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQ 886
+ + I + P I + P++S + P IP + +
Sbjct: 733 ISPEKPTTPTEKPTIPTEKPTISPEKPTTPTEKPTISPEKLTIPTEKPTIPTEKPTIPTE 792
Query: 887 PPNV----PNTP---GLLGTQPPAGPQNLPPL------------SIPNQRMPTMPMLDIR 927
P + P TP + T+ P+ P P L +I +++ T+PM +
Sbjct: 793 KPTISTEEPTTPTEETTISTEKPSIPMEKPTLPTEETTTSVEETTISTEKL-TIPM--EK 849
Query: 928 PGLIPQAPGPRFPLIQPGIPPQRGIPPPSVLDSALHPP 965
P + + P P +P I P++ P L P
Sbjct: 850 PTISTEK--PTIPTEKPTISPEKLTIPTEKLTIPTEKP 885
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 69.7 bits (169), Expect = 2e-11
Identities = 91/336 (27%), Positives = 122/336 (36%), Gaps = 70/336 (20%)
Query: 656 PPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTIPPVVPTSL 715
PP+ P PVP PG PP +P MPPP P P +IPP VP+
Sbjct: 143 PPSGPGRFPVPSPGHRSGPP-----------EPQRNRMPPPRPDVGSKPDSIPPPVPS-- 189
Query: 716 VQPSLSMTPETVKDV--GFGSLVIPGG-----------SVASNLATSALPAGNVFNAPTK 762
TP ++ GS +PGG N T AL G++ +P
Sbjct: 190 -------TPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGT-ALGGGSIRQSPLS 241
Query: 763 QAEPEEKVPHLIDHQISSGENTRSVIPNDISSNAAI---LGGQPPNVTSNSGILGVQRPN 819
+ P P L + ++ P + + +I PP + + RP+
Sbjct: 242 SSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPS 301
Query: 820 VSSNSEILGVRPSNVS------SSSGIIAAQPPNILNNSGILGIQPPSVSNSSGLLGVLP 873
SS + PS SSSG + P + + L P + S G G LP
Sbjct: 302 ASSQAPPPPPPPSRPGPPPLPPSSSG--NDETPRLPQRNLSLSSSTPPLP-SPGRSGPLP 358
Query: 874 PNIPNNSGLVGVQPPNVPNTPGLLGTQPPAGPQNLPPLS---IPNQRMPTMPMLDIRPGL 930
P PP V + PG G PP PP+S ++ +P P L R G+
Sbjct: 359 PPPSER------PPPPVRDPPGRSGPLPPP-----PPVSRNGSTSRALPATPQLPSRSGV 407
Query: 931 IPQAPGPRFPLIQPGIPPQRGIPPPSVLDSALHPPP 966
GPR PL P P G PPP PPP
Sbjct: 408 DSPRSGPRPPL--PPDRPSAGAPPP--------PPP 433
Score = 47.4 bits (111), Expect = 9e-05
Identities = 61/226 (26%), Positives = 77/226 (34%), Gaps = 34/226 (15%)
Query: 864 NSSGLLGVLPPNIPNNSGLVGVQPPNVPNTPGLLGTQPPAGPQNLPPLSIPNQRMPTMPM 923
N SG G PP +P +P + P+ PG P G ++ PP N+ P P
Sbjct: 119 NDSG--GSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSP-GHRSGPPEPQRNRMPPPRPD 175
Query: 924 LDIRPGLIPQAPGPRFPLIQPGIPPQRGIPPPSVLDSALHPPPRGPFPP----------- 972
+ +P IP P P P P RG PP + P GP PP
Sbjct: 176 VGSKPDSIPP-PVPSTPRPIQSSPHNRGSPP---VPGGPRQPSPGPTPPPFPGNRGTALG 231
Query: 973 -GDIFSQP--------ERPFLAPGRQSVDNVTNPEKRIPLGN-DNIQQEGDRDYRFPPIE 1022
G I P RP L P + P P+GN +I +E PP
Sbjct: 232 GGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPP--PPQN 289
Query: 1023 TRESISRPPPVDVRDVVGRPIDPREGPGRPPL----DGRDHFGRPP 1064
+ + P P P PG PPL G D R P
Sbjct: 290 NKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLP 335
Score = 41.6 bits (96), Expect = 0.005
Identities = 29/108 (26%), Positives = 44/108 (40%)
Query: 619 TPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPPPF 678
+P+ + + + + P P L P P V P ++P PPP + P P
Sbjct: 238 SPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPST 297
Query: 679 LRASFNPSQPPPGFMPPPVPPPVVPPPTIPPVVPTSLVQPSLSMTPET 726
R S + PPP P PP +PP + L Q +LS++ T
Sbjct: 298 PRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSST 345
Score = 41.2 bits (95), Expect = 0.006
Identities = 60/184 (32%), Positives = 70/184 (38%), Gaps = 36/184 (19%)
Query: 888 PNVPNTPGLLGTQPPAGPQNLPPL--SIPNQRMPTMP-----MLDIRPGLIPQAPGPRFP 940
P P PG GT G PL S P P +P LD +P P G R P
Sbjct: 217 PTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNR-P 275
Query: 941 LIQ----PGIPPQRGIPP----PSVLDSALHPPPRGPFPPGDIFSQPERPFLAPGRQSVD 992
I P PPQ PP P S+ PPP P PP S+P P L P D
Sbjct: 276 SIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPP--PPPP----SRPGPPPLPPSSSGND 329
Query: 993 NVTN-PEKRIPLGNDN--IQQEGDRDYRFPPIETRESISRPPPVDVRDVVGRPIDPREGP 1049
P++ + L + + G R PP + RPPP VRD G R GP
Sbjct: 330 ETPRLPQRNLSLSSSTPPLPSPG-RSGPLPPPPS----ERPPP-PVRDPPG-----RSGP 378
Query: 1050 GRPP 1053
PP
Sbjct: 379 LPPP 382
Score = 40.8 bits (94), Expect = 0.008
Identities = 38/121 (31%), Positives = 45/121 (37%), Gaps = 26/121 (21%)
Query: 618 PTPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLV--------PPAFPVSMPVPP-- 667
P PV + E PPP P P+ P S PP+ P P+PP
Sbjct: 268 PPPVGNRPSI--HREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSS 325
Query: 668 PGFSPIPPPPFLRASFNPSQPP------PGFMPPP----VPPPVVPPP----TIPPVVPT 713
G P P S + S PP G +PPP PPPV PP +PP P
Sbjct: 326 SGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPV 385
Query: 714 S 714
S
Sbjct: 386 S 386
Score = 33.5 bits (75), Expect = 1.3
Identities = 29/90 (32%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Query: 1028 SRPP--PVDVRDVVGRPIDPREGPGRPPLDGRDHFGRPPVDIRENLVRPGIDHLGRRDHF 1085
SRPP P R +P P GPGR P+ H PP R + P D + D
Sbjct: 124 SRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPD-- 181
Query: 1086 GFNPEKPWGHRGDFDEREHR-VLPVYGGPK 1114
P P R +R PV GGP+
Sbjct: 182 SIPPPVPSTPRPIQSSPHNRGSPPVPGGPR 211
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 69.7 bits (169), Expect = 2e-11
Identities = 91/336 (27%), Positives = 122/336 (36%), Gaps = 70/336 (20%)
Query: 656 PPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTIPPVVPTSL 715
PP+ P PVP PG PP +P MPPP P P +IPP VP+
Sbjct: 143 PPSGPGRFPVPSPGHRSGPP-----------EPQRNRMPPPRPDVGSKPDSIPPPVPS-- 189
Query: 716 VQPSLSMTPETVKDV--GFGSLVIPGG-----------SVASNLATSALPAGNVFNAPTK 762
TP ++ GS +PGG N T AL G++ +P
Sbjct: 190 -------TPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGT-ALGGGSIRQSPLS 241
Query: 763 QAEPEEKVPHLIDHQISSGENTRSVIPNDISSNAAI---LGGQPPNVTSNSGILGVQRPN 819
+ P P L + ++ P + + +I PP + + RP+
Sbjct: 242 SSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPS 301
Query: 820 VSSNSEILGVRPSNVS------SSSGIIAAQPPNILNNSGILGIQPPSVSNSSGLLGVLP 873
SS + PS SSSG + P + + L P + S G G LP
Sbjct: 302 ASSQAPPPPPPPSRPGPPPLPPSSSG--NDETPRLPQRNLSLSSSTPPLP-SPGRSGPLP 358
Query: 874 PNIPNNSGLVGVQPPNVPNTPGLLGTQPPAGPQNLPPLS---IPNQRMPTMPMLDIRPGL 930
P PP V + PG G PP PP+S ++ +P P L R G+
Sbjct: 359 PPPSER------PPPPVRDPPGRSGPLPPP-----PPVSRNGSTSRALPATPQLPSRSGV 407
Query: 931 IPQAPGPRFPLIQPGIPPQRGIPPPSVLDSALHPPP 966
GPR PL P P G PPP PPP
Sbjct: 408 DSPRSGPRPPL--PPDRPSAGAPPP--------PPP 433
Score = 47.4 bits (111), Expect = 9e-05
Identities = 61/226 (26%), Positives = 77/226 (34%), Gaps = 34/226 (15%)
Query: 864 NSSGLLGVLPPNIPNNSGLVGVQPPNVPNTPGLLGTQPPAGPQNLPPLSIPNQRMPTMPM 923
N SG G PP +P +P + P+ PG P G ++ PP N+ P P
Sbjct: 119 NDSG--GSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSP-GHRSGPPEPQRNRMPPPRPD 175
Query: 924 LDIRPGLIPQAPGPRFPLIQPGIPPQRGIPPPSVLDSALHPPPRGPFPP----------- 972
+ +P IP P P P P RG PP + P GP PP
Sbjct: 176 VGSKPDSIPP-PVPSTPRPIQSSPHNRGSPP---VPGGPRQPSPGPTPPPFPGNRGTALG 231
Query: 973 -GDIFSQP--------ERPFLAPGRQSVDNVTNPEKRIPLGN-DNIQQEGDRDYRFPPIE 1022
G I P RP L P + P P+GN +I +E PP
Sbjct: 232 GGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPP--PPQN 289
Query: 1023 TRESISRPPPVDVRDVVGRPIDPREGPGRPPL----DGRDHFGRPP 1064
+ + P P P PG PPL G D R P
Sbjct: 290 NKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLP 335
Score = 41.6 bits (96), Expect = 0.005
Identities = 29/108 (26%), Positives = 44/108 (40%)
Query: 619 TPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPPPF 678
+P+ + + + + P P L P P V P ++P PPP + P P
Sbjct: 238 SPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPST 297
Query: 679 LRASFNPSQPPPGFMPPPVPPPVVPPPTIPPVVPTSLVQPSLSMTPET 726
R S + PPP P PP +PP + L Q +LS++ T
Sbjct: 298 PRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSST 345
Score = 41.2 bits (95), Expect = 0.006
Identities = 60/184 (32%), Positives = 70/184 (38%), Gaps = 36/184 (19%)
Query: 888 PNVPNTPGLLGTQPPAGPQNLPPL--SIPNQRMPTMP-----MLDIRPGLIPQAPGPRFP 940
P P PG GT G PL S P P +P LD +P P G R P
Sbjct: 217 PTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNR-P 275
Query: 941 LIQ----PGIPPQRGIPP----PSVLDSALHPPPRGPFPPGDIFSQPERPFLAPGRQSVD 992
I P PPQ PP P S+ PPP P PP S+P P L P D
Sbjct: 276 SIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPP--PPPP----SRPGPPPLPPSSSGND 329
Query: 993 NVTN-PEKRIPLGNDN--IQQEGDRDYRFPPIETRESISRPPPVDVRDVVGRPIDPREGP 1049
P++ + L + + G R PP + RPPP VRD G R GP
Sbjct: 330 ETPRLPQRNLSLSSSTPPLPSPG-RSGPLPPPPS----ERPPP-PVRDPPG-----RSGP 378
Query: 1050 GRPP 1053
PP
Sbjct: 379 LPPP 382
Score = 40.8 bits (94), Expect = 0.008
Identities = 38/121 (31%), Positives = 45/121 (37%), Gaps = 26/121 (21%)
Query: 618 PTPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLV--------PPAFPVSMPVPP-- 667
P PV + E PPP P P+ P S PP+ P P+PP
Sbjct: 268 PPPVGNRPSI--HREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSS 325
Query: 668 PGFSPIPPPPFLRASFNPSQPP------PGFMPPP----VPPPVVPPP----TIPPVVPT 713
G P P S + S PP G +PPP PPPV PP +PP P
Sbjct: 326 SGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPV 385
Query: 714 S 714
S
Sbjct: 386 S 386
Score = 33.5 bits (75), Expect = 1.3
Identities = 29/90 (32%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Query: 1028 SRPP--PVDVRDVVGRPIDPREGPGRPPLDGRDHFGRPPVDIRENLVRPGIDHLGRRDHF 1085
SRPP P R +P P GPGR P+ H PP R + P D + D
Sbjct: 124 SRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPD-- 181
Query: 1086 GFNPEKPWGHRGDFDEREHR-VLPVYGGPK 1114
P P R +R PV GGP+
Sbjct: 182 SIPPPVPSTPRPIQSSPHNRGSPPVPGGPR 211
>gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo
sapiens]
Length = 375
Score = 69.7 bits (169), Expect = 2e-11
Identities = 46/114 (40%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 350 SSQQHFLEPEVNLDDSIDIQQQDMDIDEGQDGVEEEVFEQEAKKVAVRSRSRTHSRSRSR 409
SS++H E + + S D ++ ++ E + ++ +K SR R+HSRSRSR
Sbjct: 20 SSKKHKSEEHNDKEHSSDKGRERLNSSENGE-------DRHKRKERKSSRGRSHSRSRSR 72
Query: 410 SPRKR-RSRSRSGSRKR-KHRKRSRSRSRERKRKSSRSYSSERRAREREKERQK 461
R R RSR R SR R + RK+SRSRSRERK+ SRS +RR R R + R +
Sbjct: 73 ERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSR 126
Score = 66.6 bits (161), Expect = 1e-10
Identities = 41/78 (52%), Positives = 52/78 (66%), Gaps = 6/78 (7%)
Query: 397 RSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRARERE 456
RSRSR +SRSRS +++SRSRS RKR+ R RSRSRSR R R SRS R R R
Sbjct: 87 RSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRS-----RTRSRS 141
Query: 457 KERQKKGLPPIR-SKTLS 473
++R+K+ P R S++LS
Sbjct: 142 RDRKKRIEKPRRFSRSLS 159
Score = 62.4 bits (150), Expect = 3e-09
Identities = 37/73 (50%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 389 QEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSS 448
+E KK RSR R SRSRSR +K RSRSR R+ + R RSRSR R R R SR+ S
Sbjct: 81 RERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRS- 139
Query: 449 ERRAREREKERQK 461
R+R+R+K +K
Sbjct: 140 --RSRDRKKRIEK 150
Score = 60.8 bits (146), Expect = 8e-09
Identities = 40/86 (46%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 389 QEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSS 448
+E KK RSR R SRSRSR RKRR RSRS SR R HR R+RSRSR R R R
Sbjct: 91 RERKKSRSRSRERKKSRSRSRE-RKRRIRSRSRSRSR-HRHRTRSRSRTRSRSRDRKKRI 148
Query: 449 ERRAREREKERQKKGLPPIRSKTLSV 474
E+ R + PP R + ++
Sbjct: 149 EKPRRFSRSLSRTPSPPPFRGRNTAM 174
Score = 42.4 bits (98), Expect = 0.003
Identities = 36/89 (40%), Positives = 44/89 (49%), Gaps = 15/89 (16%)
Query: 389 QEAKKVAVRSRSR-----THSRSRSRSPRKRRSRSRSGSRKRKHRKR-------SRSRSR 436
+E KK RSR R + SRSRSR + RSRSR+ SR R +KR SRS SR
Sbjct: 101 RERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSR 160
Query: 437 ERKRKSSRSYSSERRARE---REKERQKK 462
R ++ A+E R ER KK
Sbjct: 161 TPSPPPFRGRNTAMDAQEALARRLERAKK 189
Score = 32.7 bits (73), Expect = 2.3
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 18/138 (13%)
Query: 175 PDPWVSQITNTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSILQALDAGLVVQLQ 234
P P+ + T D A+A+ L+ + ++LQ+ + +++QK Q A G V+ +
Sbjct: 164 PPPFRGRNTAMDAQEALARRLE--RAKKLQEQREKEMVEKQKQQEIAAAAATGGSVLNVA 221
Query: 235 ALTA---QLTAAAAAANTLTPL------EQGVS----FNKKLMDRFDFGEDSEHSE---E 278
AL A Q+T A A + L E G++ +N ++ F E + + +
Sbjct: 222 ALLASGTQVTPQIAMAAQMAALQAKALAETGIAVPSYYNPAAVNPMKFAEQEKKRKMLWQ 281
Query: 279 PKKEIPASQLSHVSESVN 296
KKE SQ + + E +N
Sbjct: 282 GKKEGDKSQSAEIWEKLN 299
Score = 31.6 bits (70), Expect = 5.0
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 10/73 (13%)
Query: 393 KVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKS----SRSYSS 448
K + + +S H+ S + R + S + + +H+++ R SR SRS S
Sbjct: 19 KSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSR------GRSHSRSRSR 72
Query: 449 ERRAREREKERQK 461
ERR R R +ER+K
Sbjct: 73 ERRHRSRSRERKK 85
>gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo
sapiens]
Length = 434
Score = 69.7 bits (169), Expect = 2e-11
Identities = 46/114 (40%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Query: 350 SSQQHFLEPEVNLDDSIDIQQQDMDIDEGQDGVEEEVFEQEAKKVAVRSRSRTHSRSRSR 409
SS++H E + + S D ++ ++ E + ++ +K SR R+HSRSRSR
Sbjct: 79 SSKKHKSEEHNDKEHSSDKGRERLNSSENGE-------DRHKRKERKSSRGRSHSRSRSR 131
Query: 410 SPRKR-RSRSRSGSRKR-KHRKRSRSRSRERKRKSSRSYSSERRAREREKERQK 461
R R RSR R SR R + RK+SRSRSRERK+ SRS +RR R R + R +
Sbjct: 132 ERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSR 185
Score = 66.6 bits (161), Expect = 1e-10
Identities = 41/78 (52%), Positives = 52/78 (66%), Gaps = 6/78 (7%)
Query: 397 RSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRARERE 456
RSRSR +SRSRS +++SRSRS RKR+ R RSRSRSR R R SRS R R R
Sbjct: 146 RSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRS-----RTRSRS 200
Query: 457 KERQKKGLPPIR-SKTLS 473
++R+K+ P R S++LS
Sbjct: 201 RDRKKRIEKPRRFSRSLS 218
Score = 62.4 bits (150), Expect = 3e-09
Identities = 37/73 (50%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 389 QEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSS 448
+E KK RSR R SRSRSR +K RSRSR R+ + R RSRSR R R R SR+ S
Sbjct: 140 RERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRS- 198
Query: 449 ERRAREREKERQK 461
R+R+R+K +K
Sbjct: 199 --RSRDRKKRIEK 209
Score = 60.8 bits (146), Expect = 8e-09
Identities = 40/86 (46%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 389 QEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSS 448
+E KK RSR R SRSRSR RKRR RSRS SR R HR R+RSRSR R R R
Sbjct: 150 RERKKSRSRSRERKKSRSRSRE-RKRRIRSRSRSRSR-HRHRTRSRSRTRSRSRDRKKRI 207
Query: 449 ERRAREREKERQKKGLPPIRSKTLSV 474
E+ R + PP R + ++
Sbjct: 208 EKPRRFSRSLSRTPSPPPFRGRNTAM 233
Score = 47.4 bits (111), Expect = 9e-05
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 388 EQEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYS 447
EQ V+ R+ +SRSRSRS ++R G RKH RSRSRS+E +R S+ S
Sbjct: 25 EQSEVSVSPRASKHHYSRSRSRSRERKRKSDNEG---RKH--RSRSRSKEGRRHESKDKS 79
Query: 448 SERRAREREKERQ 460
S++ E +++
Sbjct: 80 SKKHKSEEHNDKE 92
Score = 43.1 bits (100), Expect = 0.002
Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 38/136 (27%)
Query: 364 DSIDIQQQDMDIDEGQDGVEEEVFEQEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRSGSR 423
D + ++ D D+ ++ E V + +K RSRSR+ R R R+ RSRS S+
Sbjct: 9 DGLAPEKTSPDRDKKKEQSEVSVSPRASKHHYSRSRSRSRERKRKSDNEGRKHRSRSRSK 68
Query: 424 K-RKHRKRSRS-------------------------------RSRERKRKS------SRS 445
+ R+H + +S R + ++RKS SRS
Sbjct: 69 EGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRS 128
Query: 446 YSSERRAREREKERQK 461
S ERR R R +ER+K
Sbjct: 129 RSRERRHRSRSRERKK 144
Score = 42.4 bits (98), Expect = 0.003
Identities = 36/89 (40%), Positives = 44/89 (49%), Gaps = 15/89 (16%)
Query: 389 QEAKKVAVRSRSR-----THSRSRSRSPRKRRSRSRSGSRKRKHRKR-------SRSRSR 436
+E KK RSR R + SRSRSR + RSRSR+ SR R +KR SRS SR
Sbjct: 160 RERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSR 219
Query: 437 ERKRKSSRSYSSERRARE---REKERQKK 462
R ++ A+E R ER KK
Sbjct: 220 TPSPPPFRGRNTAMDAQEALARRLERAKK 248
Score = 40.8 bits (94), Expect = 0.008
Identities = 29/66 (43%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 406 SRSRSPRKRRSRSRSGSRKRKHR-KRSRSRSRERKRKS--------SRSYSSERRARERE 456
S R +K +S R KH RSRSRSRERKRKS SRS S E R E +
Sbjct: 17 SPDRDKKKEQSEVSVSPRASKHHYSRSRSRSRERKRKSDNEGRKHRSRSRSKEGRRHESK 76
Query: 457 KERQKK 462
+ KK
Sbjct: 77 DKSSKK 82
Score = 32.7 bits (73), Expect = 2.3
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 18/138 (13%)
Query: 175 PDPWVSQITNTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSILQALDAGLVVQLQ 234
P P+ + T D A+A+ L+ + ++LQ+ + +++QK Q A G V+ +
Sbjct: 223 PPPFRGRNTAMDAQEALARRLE--RAKKLQEQREKEMVEKQKQQEIAAAAATGGSVLNVA 280
Query: 235 ALTA---QLTAAAAAANTLTPL------EQGVS----FNKKLMDRFDFGEDSEHSE---E 278
AL A Q+T A A + L E G++ +N ++ F E + + +
Sbjct: 281 ALLASGTQVTPQIAMAAQMAALQAKALAETGIAVPSYYNPAAVNPMKFAEQEKKRKMLWQ 340
Query: 279 PKKEIPASQLSHVSESVN 296
KKE SQ + + E +N
Sbjct: 341 GKKEGDKSQSAEIWEKLN 358
>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
Length = 494
Score = 69.3 bits (168), Expect = 2e-11
Identities = 39/63 (61%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 398 SRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRK-RSRSRSRERKRKSSRSYSSERRARERE 456
SRSR+HSRSRSRS R+SRSRSGS K H K RSRSRS R R SRS S R ++E
Sbjct: 186 SRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSRSRSKKE 245
Query: 457 KER 459
K R
Sbjct: 246 KSR 248
Score = 54.7 bits (130), Expect = 6e-07
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 397 RSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYS-SERRARER 455
+SRSR+ S SRSRS + RS+SRS S+K K R S+ +SR R + +S S S+ +A E+
Sbjct: 217 KSRSRSRSGSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEK 276
Query: 456 EKERQKKGLPPIRS 469
+ G P RS
Sbjct: 277 IQNNDNVGKPKSRS 290
Score = 52.8 bits (125), Expect = 2e-06
Identities = 49/193 (25%), Positives = 77/193 (39%), Gaps = 31/193 (16%)
Query: 274 EHSEEPKKEIPASQLSHVSESVNNSIFHQIAEQLQQQ-NLEHLRQQLLEQQQPQKATPQD 332
E S P KE S+ SH + + Q E++Q N+ + + + + + +
Sbjct: 245 EKSRSPSKEKSRSR-SHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSKSRSR 303
Query: 333 SQEGTFGSEHSASPSQGSSQQHFLEPEVNLDDSIDIQQQDMDIDEGQDGVEEEVFEQEAK 392
SQE E S S+G SQ+ L +Q + G
Sbjct: 304 SQERRVEEEKRGSVSRGRSQEKSL-------------RQSRSRSRSKGG----------- 339
Query: 393 KVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRA 452
SRSR+ SRS+S+ RK R RSR SR R + RSR+R K S ++
Sbjct: 340 -----SRSRSRSRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKK 394
Query: 453 REREKERQKKGLP 465
++ + +R + P
Sbjct: 395 KKEDTDRSQSRSP 407
Score = 52.4 bits (124), Expect = 3e-06
Identities = 40/75 (53%), Positives = 45/75 (60%), Gaps = 11/75 (14%)
Query: 397 RSRSRTHSRSRSR------SPRKRRSRSRSGSRKR-KHRKRSRSRSRERKRKSSRSYSSE 449
RSRSR +SRSR S K RSRSRSGSR R K R RS+SRSR +K K SRS S E
Sbjct: 195 RSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSRSRSKKEK-SRSPSKE 253
Query: 450 R---RAREREKERQK 461
+ R+ K R K
Sbjct: 254 KSRSRSHSAGKSRSK 268
Score = 51.2 bits (121), Expect = 6e-06
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 10/141 (7%)
Query: 308 QQQNLEHLRQQLLEQQQPQKATPQDSQEGTFGSEHSASPSQGSSQQHFLEPEVNLDDSID 367
++++ R + ++ ++ + +DS+ G+ + + S+ P ++ +
Sbjct: 361 REESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRS----PSRSVSKERE 416
Query: 368 IQQQDMDIDEGQDGVEEEVFEQEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRKRKH 427
+ + EG+ E QE RSRSR++S+S+ P + RSRS+S S+ R
Sbjct: 417 HAKSESSQREGRGESENAGTNQET-----RSRSRSNSKSKPNLPSESRSRSKSASKTRSR 471
Query: 428 RK-RSRSRSRERKRKSSRSYS 447
K RSRS SR R SRS+S
Sbjct: 472 SKSRSRSASRSPSRSRSRSHS 492
Score = 45.1 bits (105), Expect = 4e-04
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 12/95 (12%)
Query: 391 AKKVAVRSRSRTHSRSRSRSPRKRRSRSRS------------GSRKRKHRKRSRSRSRER 438
+KK RS S+ SRSRS S K RS+S+ G K + R +S+S+ R
Sbjct: 242 SKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSKSR 301
Query: 439 KRKSSRSYSSERRAREREKERQKKGLPPIRSKTLS 473
R R E+R Q+K L RS++ S
Sbjct: 302 SRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRS 336
Score = 41.2 bits (95), Expect = 0.006
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 16/78 (20%)
Query: 412 RKRRSRSRSGSRKR-----KHRKRSRSR----------SRERKRKSSRSYSSER-RARER 455
R+RRS SRS S R +H ++SRSR SR R R SRS S R R++ R
Sbjct: 180 RRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSR 239
Query: 456 EKERQKKGLPPIRSKTLS 473
+ +++K P + K+ S
Sbjct: 240 SRSKKEKSRSPSKEKSRS 257
Score = 38.9 bits (89), Expect = 0.032
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 369 QQQDMDIDEGQDGVEEEVFEQEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRKR--- 425
+++D D + + E+E K R + + ++ RSRSRS S+ +
Sbjct: 395 KKEDTDRSQSRSPSRSVSKEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNL 454
Query: 426 --KHRKRSRSRSRERKRKSSRSYSSER---RAREREKER 459
+ R RS+S S+ R R SRS S+ R R+R R R
Sbjct: 455 PSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSRSHSR 493
Score = 35.4 bits (80), Expect = 0.35
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 341 EHSASPSQGSSQQHFLEPEVNLDDSIDIQQQDMDIDEGQDGVEEEVFEQEAKKVAVRSRS 400
EH+ S S SQ+ N + + + + + + + E + RSRS
Sbjct: 416 EHAKSES---SQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRS 472
Query: 401 RTHSRSRSRSPRKRRSRSRSGS 422
++ SRS SRSP + RSRS S S
Sbjct: 473 KSRSRSASRSPSRSRSRSHSRS 494
Score = 32.7 bits (73), Expect = 2.3
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 414 RRSRSRSGSRKRKH--RKRSRSRSRERKRKSSRSYS---SERRAREREKERQKKG 463
R + GSR+R+ R RS SRSR R R S +S S S + + + + R + G
Sbjct: 171 RLVEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSG 225
>gi|14670268 RD RNA-binding protein [Homo sapiens]
Length = 380
Score = 68.9 bits (167), Expect = 3e-11
Identities = 73/269 (27%), Positives = 111/269 (41%), Gaps = 25/269 (9%)
Query: 276 SEEPKKEIPASQLSHVSESVNNSIFHQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQE 335
+E+ K+ + + +S + NS F + L +L + ++ T Q Q
Sbjct: 62 TEQAKQLVKSGAISAIKAETKNSGF---------KRSRTLEGKLKDPEKGPVPTFQPFQR 112
Query: 336 GTFGSEHSASPSQGSSQQHFLEPEVNLDDSIDIQQQDMDIDEGQ---DGVEEEV-FEQEA 391
+ S+ ++ E V+ D + D + EG DG + E
Sbjct: 113 SISADDDLQESSRRPQRKSLYESFVSSSDRLRELGPDGEEAEGPGAGDGPPRSFDWGYEE 172
Query: 392 KKVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSER- 450
+ A S S SRSR RS + R R R R R R R R R R+R R R ER
Sbjct: 173 RSGAHSSASPPRSRSRDRSHERNRDRDRDRERDRD-RDRDRDRERDRDRDRDRDRDRERD 231
Query: 451 RAREREKERQKKGLPPIR------SKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIE 504
R RER+++R ++G P R + TL+V D T L F FG I
Sbjct: 232 RDRERDRDRDREG--PFRRSDSFPERRAPRKGNTLYVYGEDMTPTL--LRGAFSPFGNII 287
Query: 505 SINMIPPRGCAYVCMVHRQDAFRALQKLS 533
++M PPR CA+V + A +A+ +L+
Sbjct: 288 DLSMDPPRNCAFVTYEKMESADQAVAELN 316
>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
Length = 1711
Score = 68.6 bits (166), Expect = 4e-11
Identities = 87/381 (22%), Positives = 139/381 (36%), Gaps = 61/381 (16%)
Query: 618 PTPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPPP 677
P P+ V PP+A++Q PV P+ PT+ L PVP P +P+P
Sbjct: 294 PVPLSAPAPAPLSVPVSAPPLALIQAPVPPSAPTLVLA--------PVPTPVLAPMP--- 342
Query: 678 FLRASFNPSQPPPGFMPPPVPPPVVPPPTIPPVVPTSLVQPSLSMTPETVKDVGFGSLVI 737
AS P+ P P +P P P P PP+ P ++P P + TP + +
Sbjct: 343 ---ASTPPAAPAPPSVPMPTPTPSSGPPSTPTLIPAFAPTPVPAPTPAPIFTP--APTPM 397
Query: 738 PGGSVASNLATSALPAGNVFNA---PTKQAEPEEKVPHLIDHQISSGENTRSVIPNDISS 794
P + A+ ++ +PA + P QA +KVP
Sbjct: 398 PAATPAAIPTSAPIPASFSLSRVCFPAAQAPAMQKVP----------------------- 434
Query: 795 NAAILGGQPPNVTSNSGILGVQRPNVSSNSEILGVRPSNVSSSSGIIAAQPPNILNNSGI 854
L QP V + S L P + P+ + SS + P+ L + +
Sbjct: 435 ----LSFQPGTVLTPSQPLVYIPPPSCGQPLSVATLPTTLGVSSTLTLPVLPSYLQDRCL 490
Query: 855 LGI-QPPSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVPNTPGLLGTQPPAGPQNLP-PLS 912
G+ P + + V P + ++S LV ++ +P T T P +P PL+
Sbjct: 491 PGVLASPELRSYPYAFSVARP-LTSDSKLVSLEVNRLPCTSPSGSTTTQPAPDGVPGPLA 549
Query: 913 IPNQRMPTMPMLDIRPGLIPQAPG---PRFPLIQPGIPPQR---------GIPPPSVLDS 960
+ + +L L+P G P P P Q+ + P L+
Sbjct: 550 DTSLVTASAKVLPTPQPLLPAPSGSSAPPHPAKMPSGTEQQTEGTSVTFSPLKSPPQLER 609
Query: 961 ALHPPPRGPFPPGDIFSQPER 981
+ PP P D+ S+ R
Sbjct: 610 EMASPPECSEMPLDLSSKSNR 630
Score = 39.3 bits (90), Expect = 0.024
Identities = 45/159 (28%), Positives = 63/159 (39%), Gaps = 16/159 (10%)
Query: 614 TTQSPTPVEKET-VVTTQAEVFPPPVAMLQIPVAPAVPTVS-LVPPAFPVSMPVPPPGFS 671
T + PVE +VTT P P+ P AP +V VP AF V + VP +
Sbjct: 178 TLGTGVPVEGTLPLVTTNFSPLPAPIC----PPAPGSASVPHSVPDAFQVPLSVP----A 229
Query: 672 PIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTIPPVV----PTSLVQPSLSMTPETV 727
P+P + S P P PVP PP++P ++ P S+ L P +
Sbjct: 230 PVPHSGLVPVQVATSVPAPSPPLAPVPALAPAPPSVPTLISDSNPLSVSASVLVPVPASA 289
Query: 728 KDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEP 766
G L P + S + SA P + AP + P
Sbjct: 290 PPSGPVPLSAPAPAPLS-VPVSAPPLA-LIQAPVPPSAP 326
Score = 34.3 bits (77), Expect = 0.78
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 17/131 (12%)
Query: 383 EEEVFEQEAKKVAVRSRSRTHSRSRSRSPRKRRSRS-RSGSRKRKHRKRSRSRSRERKRK 441
EE+ + +AK V VRS R R P++ +S R S K R + + RK
Sbjct: 1128 EEQQLQPQAKAV-VRSSHRPKCRKLPSDPQESTKKSPRGASDSGKEHNGVRGKHKHRKPT 1186
Query: 442 SSRSYSSERRAREREK---ERQKKG-----LPPI-----RSKTLSVCSTTLWVGQVDKKA 488
S S +RA E+ E++ K +P + RS++ S+CS+ + G D
Sbjct: 1187 KPESQSPGKRADSHEEGSLEKKAKSSFRDFIPVVLSTRTRSQSGSICSS--FAGMADSDM 1244
Query: 489 TQQDLTNLFEE 499
Q++ EE
Sbjct: 1245 GSQEVFPTEEE 1255
Score = 32.3 bits (72), Expect = 3.0
Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 16/129 (12%)
Query: 327 KATPQDSQEGTFGSEHSASPSQGSSQQHFLEPEVNLDDSIDIQQQDMDIDEGQDGVEEEV 386
+ T +D+Q + S H+ S S + L + + +Q D +E ++ EEE
Sbjct: 1269 RKTQRDTQ---YRSHHAQDKSLLSQGRRHLWRAREMPWRTEAARQMWDTNEEEEEEEEEG 1325
Query: 387 FEQEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSY 446
+ K+ R + RK ++ ++ + R++ R+ + RK+K+S S
Sbjct: 1326 LLKRKKR-------------RRQKSRKYQTGEYLTEQEDEQRRKGRADLKARKQKTSSSQ 1372
Query: 447 SSERRARER 455
S E R R R
Sbjct: 1373 SLEHRLRNR 1381
Score = 31.6 bits (70), Expect = 5.0
Identities = 49/173 (28%), Positives = 66/173 (38%), Gaps = 23/173 (13%)
Query: 828 GVRPSNVSSSSGIIAAQPPNILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQP 887
G+ P V++S + A PP L L PPSV L+ P + S LV V
Sbjct: 235 GLVPVQVATS--VPAPSPP--LAPVPALAPAPPSVPT---LISDSNPLSVSASVLVPVPA 287
Query: 888 PNVPNTPGLLGTQPPAG---PQNLPPLSIPNQRMP-TMPMLDIRP------GLIPQAPGP 937
P+ P L PA P + PPL++ +P + P L + P +P + P
Sbjct: 288 SAPPSGPVPLSAPAPAPLSVPVSAPPLALIQAPVPPSAPTLVLAPVPTPVLAPMPASTPP 347
Query: 938 RFPLIQPGIP-----PQRGIPPPSVLDSALHPPPRGPFPPGDIFSQPERPFLA 985
P P +P P G P L A P P P IF+ P A
Sbjct: 348 AAPA-PPSVPMPTPTPSSGPPSTPTLIPAFAPTPVPAPTPAPIFTPAPTPMPA 399
Score = 31.6 bits (70), Expect = 5.0
Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 22/117 (18%)
Query: 383 EEEVFEQEAKKVAVRSRSRT------HSRSRSRSPRKRRSRSRS---------------- 420
EEEV AK+ VR R H++ +S + RR R+
Sbjct: 1255 EEEVTPTPAKRRKVRKTQRDTQYRSHHAQDKSLLSQGRRHLWRAREMPWRTEAARQMWDT 1314
Query: 421 GSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCST 477
+ + + + ++R+R+ SR Y + E+E E+++KG ++++ S+
Sbjct: 1315 NEEEEEEEEEGLLKRKKRRRQKSRKYQTGEYLTEQEDEQRRKGRADLKARKQKTSSS 1371
>gi|24307919 small nuclear ribonucleoprotein 27kDa (U4/U6.U5) [Homo
sapiens]
Length = 155
Score = 67.4 bits (163), Expect = 8e-11
Identities = 44/108 (40%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
Query: 405 RSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGL 464
RSRSRSPR+ R RSRS SR+R+ R+R RSRSRER R+ SRS S RR R R R +
Sbjct: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRR-RSRSPRRHRSTS 61
Query: 465 PP---IRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMI 509
P ++ + T +++ T++DL EE +IE + ++
Sbjct: 62 PSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEE--EIEMMKLM 107
Score = 49.3 bits (116), Expect = 2e-05
Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 397 RSRSRTHSRSRSRSPRKR-RSRSRSGSRKRK-----HRKRSRSRSRERKRKSSRSYSSER 450
R R R+ S SR R R+R RSRSR R+R HR+RSRS R R S S ER
Sbjct: 11 RERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSRLKER 70
Query: 451 RAREREKERQKK 462
R E+++ ++ K
Sbjct: 71 RDEEKKETKETK 82
Score = 47.0 bits (110), Expect = 1e-04
Identities = 30/68 (44%), Positives = 38/68 (55%), Gaps = 11/68 (16%)
Query: 397 RSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSR------ERKRKSSRSYSSER 450
RSR R RSRSRSP +RRSRS R+HR S S SR E K+++ + S ER
Sbjct: 32 RSRERDRRRSRSRSPHRRRSRS-----PRRHRSTSPSPSRLKERRDEEKKETKETKSKER 86
Query: 451 RAREREKE 458
+ E + E
Sbjct: 87 QITEEDLE 94
Score = 45.1 bits (105), Expect = 4e-04
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 397 RSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRARERE 456
RSRSR+ R RSRSPR+ RS S S SR ++ R + ++E K K + + + E
Sbjct: 40 RSRSRSPHRRRSRSPRRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEE 99
Query: 457 KERQKK 462
+ K
Sbjct: 100 EIEMMK 105
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 67.4 bits (163), Expect = 8e-11
Identities = 69/245 (28%), Positives = 99/245 (40%), Gaps = 35/245 (14%)
Query: 635 PPPVAMLQIPVAPAVPTVSLVPPAFPVSMPVP-------PPGFSPIPPPPFLRASFNPSQ 687
PPP+ + PV P ++PPA P ++P P PP PPP + S + +
Sbjct: 527 PPPLPTMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVMPPSLPTSVPPPGMPPSLSSAG 586
Query: 688 PPPGFMPPPV----PPPVVPPPTI-----PPVVPTSLVQPSLSMTPETVKDVGFGSLVIP 738
PPP PP + PPPV+PPP++ PPV+P + P S TP G +P
Sbjct: 587 PPPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMP---LPPLSSATPPP----GIPPPGVP 639
Query: 739 GGSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDHQISSGENTRSVIPNDISSNAAI 798
G A PA ++ PE+ P L+ +S G + + S
Sbjct: 640 QGIPPQLTAAPVPPA----SSSQSSQVPEKPRPALLPTPVSFGSAPPTTYHPPLQS---- 691
Query: 799 LGGQPPNVTSNSGILGVQRPNVSSNSEILGVRPSNVSSSSGIIAAQPPNILNNSGILGIQ 858
G V S + + P SS S G+ S+ + S I A + + SG L
Sbjct: 692 -AGPSEQVNSKAPLSKSALP-YSSFSSDQGLGESSAAPSQPITAVKDMPV--RSGGLLPD 747
Query: 859 PPSVS 863
PP S
Sbjct: 748 PPRSS 752
Score = 63.9 bits (154), Expect = 9e-10
Identities = 62/208 (29%), Positives = 81/208 (38%), Gaps = 44/208 (21%)
Query: 600 ETVKSSEPVKETVQTTQS-PTPVEKETVVTTQAEVFPPPVA--MLQIPVAP-----AVPT 651
E V S + +K S P P + + PPPV L PV P VP
Sbjct: 498 EKVNSFQNMKNQYMGNMSMPPPFVPYSQMPPPLPTMPPPVLPPSLPPPVMPPALPATVPP 557
Query: 652 VSLVPPAFPVSMP--VPPPGFSP----------IPPPPFLRASFNPSQPPPGFM---PPP 696
+ PP P S+P VPPPG P +PPP A P PPP PPP
Sbjct: 558 PGMPPPVMPPSLPTSVPPPGMPPSLSSAGPPPVLPPPSLSSAGPPPVLPPPSLSSTAPPP 617
Query: 697 V----------PPPVVPPPTIPPVVPTSL----VQPSLSMTPETVKDVGFGSLVIPGGSV 742
V PPP +PPP +P +P L V P+ S V + +L+ S
Sbjct: 618 VMPLPPLSSATPPPGIPPPGVPQGIPPQLTAAPVPPASSSQSSQVPEKPRPALLPTPVSF 677
Query: 743 ASNLATSALPAGNVFNAPTKQAEPEEKV 770
S T+ ++ P + A P E+V
Sbjct: 678 GSAPPTT-------YHPPLQSAGPSEQV 698
Score = 60.8 bits (146), Expect = 8e-09
Identities = 79/324 (24%), Positives = 124/324 (38%), Gaps = 27/324 (8%)
Query: 647 PAVPTVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPT 706
P VP + PP + PV PP P PP L A+ P PP MPP +P VPPP
Sbjct: 519 PFVPYSQMPPPLPTMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVMPPSLPTS-VPPPG 577
Query: 707 IPPVVPTSLVQPSLSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEP 766
+PP + S P + P ++ G V+P S++S +P + +A P
Sbjct: 578 MPPSL--SSAGPPPVLPPPSLSSAG-PPPVLPPPSLSSTAPPPVMPLPPLSSATPPPGIP 634
Query: 767 EEKVPHLIDHQISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPNVSSNSEI 826
VP I Q+ T + +P SS ++ + +P + + P + + +
Sbjct: 635 PPGVPQGIPPQL-----TAAPVPPASSSQSSQVPEKPRPALLPTPVSFGSAPPTTYHPPL 689
Query: 827 LGVRPSNVSSSSGIIAAQPPNILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQ 886
PS +S ++ + S G+ S + S + V ++P SG +
Sbjct: 690 QSAGPSEQVNSKAPLSKSALPYSSFSSDQGLGESSAAPSQPITAV--KDMPVRSGGL--- 744
Query: 887 PPNVPNTPGLLGTQPPAGPQNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGPRFPLIQPGI 946
+P+ P + P GP+ P + P+ GPRF +P
Sbjct: 745 ---LPDPPRSSYLESPRGPRFDGPRRFEDLGSRCEG---------PRPKGPRFEGNRPDG 792
Query: 947 P-PQRGIPPPSVLDSALHPPPRGP 969
P P+ P S PRGP
Sbjct: 793 PRPRYEGHPAEGTKSKWGMIPRGP 816
Score = 46.2 bits (108), Expect = 2e-04
Identities = 47/143 (32%), Positives = 57/143 (39%), Gaps = 21/143 (14%)
Query: 855 LGIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVPNTPGLLGTQPPAG---------- 904
L PP V S V+PP +P G+ PP +P P L + PP G
Sbjct: 530 LPTMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVMP--PSLPTSVPPPGMPPSLSSAGP 587
Query: 905 PQNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGPRFPL--IQPGIPPQRGIPPPSVLDSAL 962
P LPP S+ + P P+L P L AP P PL + PP GIPPP V
Sbjct: 588 PPVLPPPSLSSAGPP--PVLP-PPSLSSTAPPPVMPLPPLSSATPPP-GIPPPGVPQGIP 643
Query: 963 HPPPRGPFPPGDIFSQ---PERP 982
P PP PE+P
Sbjct: 644 PQLTAAPVPPASSSQSSQVPEKP 666
Score = 43.9 bits (102), Expect = 0.001
Identities = 31/89 (34%), Positives = 37/89 (41%), Gaps = 32/89 (35%)
Query: 665 VPPPGFSPIPPPPFLRAS-FNPSQPPPGFMPPPV-----------------------PPP 700
+PPP P+PPPP + + QPPP MPPP PP
Sbjct: 81 LPPP---PLPPPPVMPGGGYGDWQPPPPPMPPPPGPALSYQKQQQYKHQMLHHQRDGPPG 137
Query: 701 VVP-----PPTIPPVVPTSLVQPSLSMTP 724
+VP PP PPV P S + PS S P
Sbjct: 138 LVPMELESPPESPPVPPGSYMPPSQSYMP 166
Score = 42.7 bits (99), Expect = 0.002
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 654 LVPPAFPVSMPVP---PPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTI 707
+ PP P P PPG P P R+S ++PP PPP PPP+ PPP +
Sbjct: 1505 MYPPPGSYRPPPPMGKPPGSIVRPSAPPARSSVPVTRPPVPIPPPPPPPPLPPPPPV 1561
Score = 42.0 bits (97), Expect = 0.004
Identities = 39/122 (31%), Positives = 52/122 (42%), Gaps = 23/122 (18%)
Query: 887 PPNVPNTPGLLGT-----QPPAGPQNLPP---LSIPNQRMPTMPML----DIRPGLIP-- 932
PP +P P + G QPP P PP LS Q+ ML D PGL+P
Sbjct: 83 PPPLPPPPVMPGGGYGDWQPPPPPMPPPPGPALSYQKQQQYKHQMLHHQRDGPPGLVPME 142
Query: 933 -QAPGPRFPLIQPG--IPPQRGIPPPSVLDSALHPPPRG-----PFPPGDIFSQPERPFL 984
++P P P + PG +PP + PP + +PP P P S P + +L
Sbjct: 143 LESP-PESPPVPPGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQSPPSQSYL 201
Query: 985 AP 986
AP
Sbjct: 202 AP 203
Score = 40.4 bits (93), Expect = 0.011
Identities = 29/90 (32%), Positives = 36/90 (40%), Gaps = 16/90 (17%)
Query: 620 PVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPPPFL 679
P E T+ PP + P P S+V P+ P + P P+P PP
Sbjct: 1491 PQESRLQNTSSRPGMYPPPGSYRPPPPMGKPPGSIVRPSAPPARSSVPVTRPPVPIPP-- 1548
Query: 680 RASFNPSQPPPGFMPPPVPPPVVPPPTIPP 709
PPP PPP+PP PPP I P
Sbjct: 1549 --------PPP---PPPLPP---PPPVIKP 1564
Score = 39.7 bits (91), Expect = 0.019
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 20/114 (17%)
Query: 656 PPAFPVSMPVPPPGFSPIPPPPFLRASFN---PSQPPPGFMPPPVPPPVVPPPTIPPVVP 712
P P+ + PP P+PP ++ S + P QPPP + PP P +PP
Sbjct: 136 PGLVPMELESPPES-PPVPPGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLPP-------- 186
Query: 713 TSLVQPSLSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEP 766
QPS S +P + + P S +S+ + S L + P+ QA P
Sbjct: 187 ---AQPSPSQSPPSQSYLA----PTPSYSSSSSSSQSYLSHSQSY-LPSSQASP 232
Score = 39.7 bits (91), Expect = 0.019
Identities = 98/388 (25%), Positives = 139/388 (35%), Gaps = 64/388 (16%)
Query: 902 PAGPQNLPPLSIPNQRMPTMPMLDIRPGLIPQAPG---PRFPLIQPGIPPQRGIPPPSVL 958
P +LPP Q + P + PG P P +++P PP R P +
Sbjct: 1483 PQMADHLPPQESRLQNTSSRPGMYPPPGSYRPPPPMGKPPGSIVRPSAPPARSSVPVTRP 1542
Query: 959 DSALHPPPRGPFPPGDIFSQPERPFLAPGRQSVDNVT-NPEKRIPLGNDNIQQEGDRDYR 1017
+ PPP P PP P P + P +V+ + + L + N +Q + +++
Sbjct: 1543 PVPIPPPP--PPPP----LPPPPPVIKPQTSAVEQERWDEDSFYGLWDTNDEQGLNSEFK 1596
Query: 1018 -----------FPPIETRESISRPPPVDVRDVVGRPIDPREGPGRPPLDGRDHFGRPPVD 1066
PP SI P PV +G P P P PP+ +G D
Sbjct: 1597 SETAAIPSAPVLPPPPVHSSIPPPGPVP----MGMP--PMSKP--PPVQQTVDYGHGR-D 1647
Query: 1067 IRENLVRPGIDHLGRRDHFGFNPEKPWGHRGDFDEREHRVLPVYGGPKGLHEERGRFRSG 1126
I N V + + + P+ P R F E EH G + R R
Sbjct: 1648 ISTNKV----EQIPYGERITLRPD-PLPERSTF-ETEH---------AGQRDRYDRERDR 1692
Query: 1127 NYRFDPRSGPWNRGFGQEVHRDFD-DRRRPWERQRDRDDRDFDFCREMNGNRLGRDRIQN 1185
FD +S HRDF DR +R RDR D+D R R DR Q+
Sbjct: 1693 EPYFDRQSNV------IADHRDFKRDRETHRDRDRDRGVIDYDRDRFDRERRPRDDRAQS 1746
Query: 1186 TWVPPPHARV-FDYFEGATSQRKGDNVPQVNGENT---ERHAQPP---PIPVQNDPELYE 1238
H+ F+ + RK D P G + ER P P+P P L
Sbjct: 1747 YRDKKDHSSSRRGGFDRPSYDRKSDR-PVYEGPSMFGGERRTYPEERMPLPA---PSLSH 1802
Query: 1239 KLTSSNEINKE-KSDTVADIESEPVVES 1265
+ + + K+ +S V DI P ES
Sbjct: 1803 QPPPAPRVEKKPESKNVDDILKPPGRES 1830
Score = 39.3 bits (90), Expect = 0.024
Identities = 32/128 (25%), Positives = 46/128 (35%), Gaps = 35/128 (27%)
Query: 636 PPVAMLQIPVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPPP------------------ 677
PP ++++ PA +V + P P+ P PPP P+PPPP
Sbjct: 1521 PPGSIVRPSAPPARSSVPVTRPPVPIPPPPPPP---PLPPPPPVIKPQTSAVEQERWDED 1577
Query: 678 ------------FLRASFNPSQPPPGFMPPPVPPPVVPPPTIPPVVPTSLVQPSLSMTPE 725
L + F P PPPV +IPP P + P +S P
Sbjct: 1578 SFYGLWDTNDEQGLNSEFKSETAAIPSAPVLPPPPV--HSSIPPPGPVPMGMPPMSKPPP 1635
Query: 726 TVKDVGFG 733
+ V +G
Sbjct: 1636 VQQTVDYG 1643
Score = 38.9 bits (89), Expect = 0.032
Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 21/100 (21%)
Query: 904 GPQNLPPLSIPNQRMP----TMPMLDIRPGLIPQAPGPRFPLIQPGIPPQRGIPPPSV-- 957
G ++PP +P +MP TMP P L P P P P P P G+PPP +
Sbjct: 512 GNMSMPPPFVPYSQMPPPLPTMPP----PVLPPSLPPPVMPPALPATVPPPGMPPPVMPP 567
Query: 958 -LDSALHPPPRGP----------FPPGDIFSQPERPFLAP 986
L +++ PP P PP + S P L P
Sbjct: 568 SLPTSVPPPGMPPSLSSAGPPPVLPPPSLSSAGPPPVLPP 607
Score = 38.1 bits (87), Expect = 0.054
Identities = 36/151 (23%), Positives = 57/151 (37%), Gaps = 18/151 (11%)
Query: 637 PVAMLQIPVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPP 696
P+ + P +P VP S +PP S PP P PPP S+ P ++PP
Sbjct: 140 PMELESPPESPPVPPGSYMPP----SQSYMPP---PQPPP-----SYYPPTSSQPYLPPA 187
Query: 697 VPPPVVPPPTIPPVVPTSLVQPSLSMTPETVKD-VGFGSLVIPGGSVASNLATSALPAGN 755
P P PP+ + PT PS S + + + + +P + + +
Sbjct: 188 QPSPSQSPPSQSYLAPT----PSYSSSSSSSQSYLSHSQSYLPSSQASPSRPSQGHSKSQ 243
Query: 756 VFNAPTKQAEPEEKVPHLIDHQISSGENTRS 786
+ P A P K + + SG +S
Sbjct: 244 LLAPPPPSAPPGNKTT-VQQEPLESGAKNKS 273
Score = 36.6 bits (83), Expect = 0.16
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 11/64 (17%)
Query: 666 PPPGFSPIPPPPF-------LRASFNPSQPPPGFMPPPVPPP-VVPPPTIPPVVPTSLVQ 717
PPPG S PPPP +R S P++ PPVP P PPP +PP P +++
Sbjct: 1507 PPPG-SYRPPPPMGKPPGSIVRPSAPPARSSVPVTRPPVPIPPPPPPPPLPP--PPPVIK 1563
Query: 718 PSLS 721
P S
Sbjct: 1564 PQTS 1567
Score = 35.0 bits (79), Expect = 0.46
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 13/95 (13%)
Query: 128 IQPLLDMAAGIPPPVVTPVLASTTTAMSNTPGTPVTPVTPANVVQGLPDPWVSQITNTDT 187
+ P +++ PPPV+ P S+T + P P+ P++ A G+P P V Q
Sbjct: 590 VLPPPSLSSAGPPPVLPPPSLSST---APPPVMPLPPLSSATPPPGIPPPGVPQGIPPQL 646
Query: 188 LAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSIL 222
AA S Q Q+ +KP+P++L
Sbjct: 647 TAAPVPPASSSQSSQV----------PEKPRPALL 671
Score = 32.3 bits (72), Expect = 3.0
Identities = 31/108 (28%), Positives = 44/108 (40%), Gaps = 12/108 (11%)
Query: 600 ETVKSSEPVKETVQTTQSP-------TPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTV 652
E ++S K T Q +P TP E++ Q + + +P P V
Sbjct: 263 EPLESGAKNKSTEQQQAAPEPDPSTMTPQEQQQYWYRQHLLSLQQRTKVHLPGHKKGPVV 322
Query: 653 SLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPG-FMPPPVPP 699
+ P PV V P S +P P +S P PPP +PPP+PP
Sbjct: 323 AKDTPE-PVKEEVTVPATSQVPESP---SSEEPPLPPPNEEVPPPLPP 366
Score = 31.6 bits (70), Expect = 5.0
Identities = 78/370 (21%), Positives = 118/370 (31%), Gaps = 78/370 (21%)
Query: 655 VPPAFPVSMPV--PPPGFS----PIPPPPFLRASFNPSQ-------------------PP 689
VPP PV++P P PG+S P P SF P
Sbjct: 19 VPPPPPVALPEASPGPGYSSSTTPAAPSSSGFMSFREQHLAQLQQLQQMHQKQMQCVLQP 78
Query: 690 PGFMPPPVPPPVV------------PPPTIPPVVPTSLVQPSLSMTPETVKDVGFGSLVI 737
PPP+PPP V PPP PP P Q + + G +
Sbjct: 79 HHLPPPPLPPPPVMPGGGYGDWQPPPPPMPPPPGPALSYQKQQQYKHQMLHHQRDGPPGL 138
Query: 738 PGGSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDHQISSGENTRSVIPNDISSNAA 797
+ S + +P G+ + P++ P + P S P SS
Sbjct: 139 VPMELESPPESPPVPPGS-YMPPSQSYMPPPQPP-------------PSYYP-PTSSQPY 183
Query: 798 ILGGQP-PNVTSNSGILGVQRPNVSSNSEILGVRPSNVSSSSGIIAAQPPNILNNSGILG 856
+ QP P+ + S P+ SS+ SSSS + + L +S
Sbjct: 184 LPPAQPSPSQSPPSQSYLAPTPSYSSS-----------SSSSQSYLSHSQSYLPSSQASP 232
Query: 857 IQPPSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVPNTPGLLGTQPPAGPQNLPPLSIPNQ 916
+P + S LL PP+ P + Q P Q A P+ P P +
Sbjct: 233 SRPSQGHSKSQLLAPPPPSAPPGNKTTVQQEPLESGAKNKSTEQQQAAPEPDPSTMTPQE 292
Query: 917 RMP---TMPMLDIRPGLIPQAPG-PRFPLI----------QPGIPPQRGIPPPSVLDSAL 962
+ +L ++ PG + P++ + +P +P +
Sbjct: 293 QQQYWYRQHLLSLQQRTKVHLPGHKKGPVVAKDTPEPVKEEVTVPATSQVPESPSSEEPP 352
Query: 963 HPPPRGPFPP 972
PPP PP
Sbjct: 353 LPPPNEEVPP 362
Score = 31.2 bits (69), Expect = 6.6
Identities = 29/110 (26%), Positives = 40/110 (36%), Gaps = 14/110 (12%)
Query: 873 PPNIPNNSGLVGVQPPNVPNTPGLLGTQPPAGPQNLPPLSIPNQRMPTMPMLDIRPGLIP 932
PP +P V P PG + PA P + +S Q + + L
Sbjct: 16 PPPVPPPPP---VALPEASPGPGYSSSTTPAAPSSSGFMSFREQHLAQLQQLQQMHQKQM 72
Query: 933 QAPGPRFPLIQPGIPPQRGIPPPSVLDSALH-----PPPRGPFPPGDIFS 977
Q ++QP P +PPP V+ + PPP P PPG S
Sbjct: 73 QC------VLQPHHLPPPPLPPPPVMPGGGYGDWQPPPPPMPPPPGPALS 116
>gi|4508017 zinc finger protein 207 isoform a [Homo sapiens]
Length = 478
Score = 67.0 bits (162), Expect = 1e-10
Identities = 92/388 (23%), Positives = 134/388 (34%), Gaps = 71/388 (18%)
Query: 614 TTQSPTPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFPVSMP-VPP--PGF 670
T+ P PV+ + + + PP+A +P P P + PP P MP VPP PG
Sbjct: 125 TSFQPQPVQPQ-------QGYIPPMAQPGLPPVPGAPGM---PPGIPPLMPGVPPLMPGM 174
Query: 671 SPIPP--PPFLRASFNPSQPPPGF----------MPPPVPPPVVPPPTI----------- 707
P+ P PP + P PG MPPPVP P +PP T
Sbjct: 175 PPVMPGMPPGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILN 234
Query: 708 -PPVVPTSLVQPSLSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEP 766
PP ++ P +T G + S AS+ + S + T QA+
Sbjct: 235 RPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQA 294
Query: 767 EEKVPHLIDHQISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPNVSSNSEI 826
+ P D + + + P + A T+NS +P S S
Sbjct: 295 AVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNST---AAKPAASITS-- 349
Query: 827 LGVRPSNVSSSSGIIAAQPPNILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQ 886
+P+ ++++S P+ + Q P + G P P + G+
Sbjct: 350 ---KPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMM 406
Query: 887 PPN--VPNTPGLLGTQPPAGPQNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGPRFPLIQP 944
PP +P G+ PP G +P MP P GP P
Sbjct: 407 PPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMP---------PYGQGP------P 451
Query: 945 GIPPQRGIPPPSVLDSALHPPPRGPFPP 972
+PP +G PP PP G PP
Sbjct: 452 MVPPYQGGPP---------RPPMGMRPP 470
Score = 37.7 bits (86), Expect = 0.070
Identities = 42/154 (27%), Positives = 54/154 (35%), Gaps = 21/154 (13%)
Query: 905 PQNLPPLS--IPNQRMPTMPMLDIRPGLIPQAPG--PRFPLIQPGIPPQRGIPPPSVLDS 960
PQ + P IP P +P + PG+ P P P P + PG+PP PP ++
Sbjct: 129 PQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMM-- 186
Query: 961 ALHPPPRGPFPPGDIFSQPERPFLAPGRQSVDNVTNPEKRIPLGNDNIQQEGDRDYRFPP 1020
P G PPG P P L PG P IP PP
Sbjct: 187 ----PMGGMMPPG-----PGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPP 237
Query: 1021 IETRESISRPPPVDVRDVVGRPIDPREGPGRPPL 1054
T + PPV +P+ P G P+
Sbjct: 238 APTATVPAPQPPVT------KPLFPSAGQMGTPV 265
>gi|9558733 transformer-2 alpha [Homo sapiens]
Length = 282
Score = 66.6 bits (161), Expect = 1e-10
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 10/166 (6%)
Query: 398 SRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSE-RRARERE 456
SR HS S SRS K RSRSR S +R R RS S S R+R SRSY+ E RR R R
Sbjct: 40 SRVSKHSESHSRSRSKSRSRSRRHSHRRYTRSRSHSHS-HRRRSRSRSYTPEYRRRRSRS 98
Query: 457 KERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMI------P 510
S+ +T L V + T++DL +F +G + +N++
Sbjct: 99 HSPMSNRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGR 158
Query: 511 PRGCAYVCMVHRQDAFRALQKLSSGSYKIGSKVIKIAWALNKGVKT 556
RG A+V D+ A+++ + ++ + I++ +++ K T
Sbjct: 159 SRGFAFVYFERIDDSKEAMER--ANGMELDGRRIRVDYSITKRAHT 202
>gi|4759098 splicing factor, arginine/serine-rich 10 [Homo sapiens]
Length = 288
Score = 66.6 bits (161), Expect = 1e-10
Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 12/173 (6%)
Query: 389 QEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRK--RKHRKRSRSRSRERKRKSSRSY 446
+ A+ RSRS+ SR RSRS + RS SRS SR+ R+H RSRSRSR +R SRSY
Sbjct: 28 KSARHTPARSRSKEDSR-RSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSY 86
Query: 447 SSE-RRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIES 505
S + RR + ++ + L V + T++DL +F ++G I
Sbjct: 87 SRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIAD 146
Query: 506 INMI------PPRGCAYVCMVHRQDAFRALQKLSSGSYKIGSKVIKIAWALNK 552
++++ RG A+V + DA A ++ + ++ + I++ +++ K
Sbjct: 147 VSIVYDQQSRRSRGFAFVYFENVDDAKEAKER--ANGMELDGRRIRVDFSITK 197
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 65.9 bits (159), Expect = 2e-10
Identities = 112/431 (25%), Positives = 151/431 (35%), Gaps = 71/431 (16%)
Query: 660 PVSMPVPPPGFSP------IPPPPFLRASFNPSQP--PPGFM--PPPVPPPVVPPPTIPP 709
PV PVPP S + P R N Q PPG PPP+PPP PPP PP
Sbjct: 204 PVVQPVPPAALSGPSGEEGLSPGGKRRRGCNSEQTGLPPGLPLPPPPLPPPPPPPPPPPP 263
Query: 710 VVPTSLVQPSLSMTPETVKDVGFGSLVIP--GGSVASNLATS--ALPAGNVFNAPTKQAE 765
+P P +T + G P GS +LP + AP A
Sbjct: 264 PLPGLATSPPFQLTKPGLWSTLHGDAWGPERKGSAPPERQEQRHSLPHPYPYPAPAYTAH 323
Query: 766 PEEKVPHLIDHQISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPNVSSNSE 825
P H + G R P S+ + +PP S+ VQR + S+
Sbjct: 324 PP---GHRLVPAAPPGPGPR---PPGAESHGCLPATRPPG--SDLRESRVQRSRMDSS-- 373
Query: 826 ILGVRPSNVSSSSGIIAAQPPNILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGLVGV 885
V P+ ++ ++PP + G S S+++GL GV P N G+ G
Sbjct: 374 ---VSPAATTACVPYAPSRPPGL---PGTTTSSSSSSSSNTGLRGVEP-----NPGIPGA 422
Query: 886 QPPNVP----NTPGLLGTQPPAGPQNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGPRFPL 941
P + G LG P A P L P P L + PG P P L
Sbjct: 423 DHYQTPALEVSHHGRLG--PSAHSSRKPFLGAP----AATPHLSLPPGPSSPPPPPCPRL 476
Query: 942 IQPGIPPQRGIPPPSV------------LDSALHPPPR---GPFPPGDIFSQPERPFLAP 986
++P PP + P+ L PPR P P + F P +
Sbjct: 477 LRPP-PPPAWLKGPACRAAREDGEILEELFFGTEGPPRPAPPPLPHREGFLGPPASRFSV 535
Query: 987 GRQSVDNVTNPEKRIPLGNDNIQQEGDRDYRFPPIETRESISRPPPVDVR---DVVGRPI 1043
G Q D+ T P P + + G +S PPP + D + RP
Sbjct: 536 GTQ--DSHTPPTPPTPTTSSSNSNSGSHS-----SSPAGPVSFPPPPYLARSIDPLPRPP 588
Query: 1044 DPREGPGRPPL 1054
P + P PPL
Sbjct: 589 SPAQNPQDPPL 599
Score = 41.2 bits (95), Expect = 0.006
Identities = 35/98 (35%), Positives = 41/98 (41%), Gaps = 18/98 (18%)
Query: 602 VKSSEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFPV 661
V P+KE + QSP P + T TT A P VA+ T + A
Sbjct: 719 VAPQPPLKEPFASLQSPFPTD--TAPTTTA----PAVAVT------TTTTTTTTTTATQE 766
Query: 662 SMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPP 699
PPP +PPPP L PSQP P PPP PP
Sbjct: 767 EEKKPPPA---LPPPPPLAKFPPPSQPQP---PPPPPP 798
Score = 40.8 bits (94), Expect = 0.008
Identities = 27/75 (36%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 644 PVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVP 703
P P PT S + S P G PPPP+L S +P PP P PP+VP
Sbjct: 543 PPTPPTPTTSS-SNSNSGSHSSSPAGPVSFPPPPYLARSIDPLPRPPSPAQNPQDPPLVP 601
Query: 704 -PPTIPPVVPTSLVQ 717
+PP P+S Q
Sbjct: 602 LTLALPPAPPSSCHQ 616
Score = 40.4 bits (93), Expect = 0.011
Identities = 95/385 (24%), Positives = 131/385 (34%), Gaps = 113/385 (29%)
Query: 677 PFLRASFNPSQPPPGFMPPPVPPPVVPPPTIPPVVPTSLVQPSLSMTPETVKDVGFGSLV 736
P L PS PPP PP P + PPP PP + E ++++ FG+
Sbjct: 457 PHLSLPPGPSSPPP----PPCPRLLRPPP--PPAWLKGPACRAAREDGEILEELFFGTEG 510
Query: 737 IPGGSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDHQISSGENTRSVIPNDISSNA 796
P A LP F P + S G P
Sbjct: 511 PP------RPAPPPLPHREGFLGPPAS-------------RFSVGTQDSHTPPT------ 545
Query: 797 AILGGQPPNVTSNSGILGVQRPNVSSNSEILGVRPSNVSSSSGIIAAQPPNILNNSGILG 856
PP T++S +SNS S+ SS +G ++ PP L S
Sbjct: 546 ------PPTPTTSSS---------NSNSG------SHSSSPAGPVSFPPPPYLARSIDPL 584
Query: 857 IQPPSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVPNTPGLLGTQPPAGPQNLPPLSIPNQ 916
+PPS P P + PP VP T L PPA P + + +
Sbjct: 585 PRPPS-----------PAQNPQD-------PPLVPLTLAL----PPAPPSSCHQNTSGSF 622
Query: 917 RMPTMPMLDIRPGLIPQAPGPRFPLIQPGIPPQRGIPPPSVLDSALHP--------PPRG 968
R P P P+ P+ P + PG PPP L A P P RG
Sbjct: 623 RRPESPR--------PRVSFPKTPEVGPG-------PPPGPLSKAPQPVPPGVGELPARG 667
Query: 969 P----FPPGDIFSQPERPFLAPGRQSVDNVTNPEKRIPLGNDNIQQEGDRDYR------F 1018
P FPP + Q E P A + D + N K + +++I++E ++
Sbjct: 668 PRLFDFPPTPLEDQFEEP--AEFKILPDGLANIMKML---DESIRKEEEQQQHEAGVAPQ 722
Query: 1019 PPI-ETRESISRPPPVDVRDVVGRP 1042
PP+ E S+ P P D P
Sbjct: 723 PPLKEPFASLQSPFPTDTAPTTTAP 747
Score = 38.1 bits (87), Expect = 0.054
Identities = 51/225 (22%), Positives = 76/225 (33%), Gaps = 75/225 (33%)
Query: 574 EKVKVDDLEGFAEGGMIDQETVNTEWETVKSSEPVKETVQTTQSP-------TPVEKETV 626
E ++ ++ + E G+ Q + + +++S P +T TT +P T T
Sbjct: 704 ESIRKEEEQQQHEAGVAPQPPLKEPFASLQSPFPT-DTAPTTTAPAVAVTTTTTTTTTTT 762
Query: 627 VTTQAEVFPPPVAMLQIPVA----PAVPTVSLVPPAFPVSM------------------- 663
T + E PPP P+A P+ P PP P S+
Sbjct: 763 ATQEEEKKPPPALPPPPPLAKFPPPSQPQPPPPPPPSPASLLKSLASVLEGQKYCYRGTG 822
Query: 664 ----------------PVPPPGFSPIPPP---PFLRASFNPS------------------ 686
P PP G + +PP P + S PS
Sbjct: 823 AAVSTRPGPLPTTQYSPGPPSGATALPPTSAAPSAQGSPQPSASSSSQFSTSGGPWARER 882
Query: 687 ----QPPPGFMPPPVPPPVVPPPTIPPVVPTSLVQPSLSMTPETV 727
+P PG M P PP PP ++PP S V +S ET+
Sbjct: 883 RAGEEPVPGPMTPTQPP---PPLSLPPARSESEVLEEISRACETL 924
Score = 37.7 bits (86), Expect = 0.070
Identities = 33/92 (35%), Positives = 34/92 (36%), Gaps = 3/92 (3%)
Query: 635 PPPVAMLQIPVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMP 694
P P Q P P VP +PPA P S G P P R SF P P G P
Sbjct: 588 PSPAQNPQDP--PLVPLTLALPPAPPSSCHQNTSGSFRRPESPRPRVSF-PKTPEVGPGP 644
Query: 695 PPVPPPVVPPPTIPPVVPTSLVQPSLSMTPET 726
PP P P P P V P L P T
Sbjct: 645 PPGPLSKAPQPVPPGVGELPARGPRLFDFPPT 676
>gi|33620745 pre-mRNA cleavage complex II protein Pcf11 [Homo
sapiens]
Length = 1555
Score = 65.9 bits (159), Expect = 2e-10
Identities = 106/496 (21%), Positives = 206/496 (41%), Gaps = 68/496 (13%)
Query: 22 SKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEK 81
SK + +T A + + F K +V +E K K+P +Y++DSIV+ G+E
Sbjct: 33 SKPHINMLTILAEENLPFAKEIVSLIEAQTAKAPSSEKLPVMYLMDSIVKN----VGRE- 87
Query: 82 DVFAPRFSNNIISTFQNLYRCPGDDKSK-IVRVLNLWQK----NNVFKSEIIQPLLDMAA 136
+ F+ N+++TF ++ ++ K + ++ + W + ++ ++ LD A
Sbjct: 88 --YLTAFTKNLVATFICVFEKVDENTRKSLFKLRSTWDEIFPLKKLYALDVRVNSLDPAW 145
Query: 137 GI---PPPVVTPVLASTTTAMSNTPGTPVTPVTPANVVQGLPDPWVSQIT-NTDTLAAVA 192
I PP V T + ++ +P P TP T + P V I N +
Sbjct: 146 PIKPLPPNVNTSSIHVNPKFLNKSPEEPSTPGTVVSSPSISTPPIVPDIQKNLTQEQLIR 205
Query: 193 QILQSPQGQ--QLQQLIQTLQIQQQKPQPSI---LQALDAGL---VVQLQALTAQLTAAA 244
Q L + Q Q +LQQ L+++Q K Q ++ +Q + L + +Q+ A
Sbjct: 206 QQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSVQQETSNLGPGSAPSKLHVSQIPPMA 265
Query: 245 AAANTLTPLE---------------QGVSFNKKL--MDRFDFGEDSEHSEE--------- 278
A P++ +G + + +L + + G+D H +E
Sbjct: 266 VKAPHQVPVQSEKSRPGPSLQIQDLKGTNRDPRLNRISQHSHGKDQSHRKEFLMNTLNQS 325
Query: 279 ---PKKEIPASQLSHVSESVNNSIFHQIAEQLQQQNLEHLRQQLLEQQQPQKATP-QDSQ 334
K IP+ +L+ + + S E++ ++ L+ L + + + + +P ++
Sbjct: 326 DTKTSKTIPSEKLNSSKQEKSKS-----GEKITKKELDQLDSK--SKSKSKSPSPLKNKL 378
Query: 335 EGTFGSEHSASPSQGSSQQHFLEPEV--NLDDSIDIQQQDMDIDEGQDGVEEEVFEQEAK 392
T ++ S S S + +P + +L D D +D D+ E + E++ ++ K
Sbjct: 379 SHTKDLKNQESESMRLSDMNKRDPRLKKHLQDKTD--GKDDDVKEKRKTAEKKDKDEHMK 436
Query: 393 KVAVR---SRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSE 449
R SR++ + + + G++ + R RSRSR K +S +S +
Sbjct: 437 SSEHRLAGSRNKIINGIVQKQDTITEESEKQGTKPGRSSTRKRSRSRSPKSRSPIIHSPK 496
Query: 450 RRAREREKERQKKGLP 465
RR R K RQ+ P
Sbjct: 497 RRDRRSPKRRQRSMSP 512
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 65.1 bits (157), Expect = 4e-10
Identities = 100/392 (25%), Positives = 133/392 (33%), Gaps = 78/392 (19%)
Query: 607 PVKETVQTTQSPTPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFPVSMPVP 666
P +Q+ T + T+ T + + PP++ L P A P ++L P P S P
Sbjct: 355 PSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPAS 414
Query: 667 PPGFSPIPPPP----------FLRASFNPSQPPPGFMP--PPVPPPVVPPPTIPPVVPTS 714
PP SP+ P L+A F+P PP P PP PPV P T P P S
Sbjct: 415 PP-LSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPS 473
Query: 715 LVQPSLSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLI 774
L P L + P P LA L P QA P P L
Sbjct: 474 LAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAK----PPPQAPPALATPPL- 528
Query: 775 DHQISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGILG------VQRPNVSSNSEILG 828
+ S A GQ P S S + Q P V + + +L
Sbjct: 529 ---------------QALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLA-APLLQ 572
Query: 829 VRPSNVSSSSGIIAAQPPNILNNSGILGIQ-----------PPSVSNSSGLLGVLPPNIP 877
V PS +S + +PP ++ + G + PPS S SS L G P++
Sbjct: 573 VPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSG---PDLA 629
Query: 878 NNSGLVGVQPPNVPNTPGLLGTQPPAGPQNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGP 937
+S P + + P G PP P + P + P P
Sbjct: 630 GHSSSATSTPEELRG----YDSGPEGGAAASPP--------PDAELAACHPAAWSRGPAP 677
Query: 938 RFPLIQPGIPPQRGIPPPSVLDSALHPPPRGP 969
PL G P G P P PP GP
Sbjct: 678 --PLAFRGAP---GAPLP-------WPPATGP 697
Score = 58.2 bits (139), Expect = 5e-08
Identities = 119/489 (24%), Positives = 167/489 (34%), Gaps = 103/489 (21%)
Query: 605 SEPVKETVQTTQSP--TPVEKETV-----VTTQAEVFPPPVAMLQI---PVAPAVPTVSL 654
S+P + +Q + P TP K+ +++ P P A LQ P PA P S
Sbjct: 270 SQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSS 329
Query: 655 VPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPP---------------GFMP-PPVP 698
+ +P+ PP P PP P+ PP F+P PP+
Sbjct: 330 LTCQLATPLPLAPPS--PSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLS 387
Query: 699 PPVVPPPTIPPVVPTSLVQPSLSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFN 758
P PPP PP +L P L P L P + LA L A F+
Sbjct: 388 PLATPPPQAPP----ALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQA--PFS 441
Query: 759 APTKQAEPEEKVPHLIDHQISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRP 818
P P + P S + V P+ + A PP++ +
Sbjct: 442 PP---PSPPVQAPF-------SPPASPPVSPSATPPSQA-----PPSLAAPP-------- 478
Query: 819 NVSSNSEILGVRPSNVSSSSGIIAAQPPNILNNSGILGIQPPSVSNSSGLLGVLPPNIPN 878
L V PS +S +A PP PP ++ L PP P
Sbjct: 479 --------LQVPPSPPASPPMSPSATPP---------PQAPPPLAAPPLQLAKPPPQAPP 521
Query: 879 NSGLVGVQPPNVPNTPGLLGTQPPAGPQ-NLP--PLSIPNQRMPTM---PMLDIRPGLIP 932
+Q +P+ P Q P P +LP PL+ P + P + P+L + P P
Sbjct: 522 ALATPPLQA--LPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPS-PP 578
Query: 933 QAPGPRFPLIQPGIPPQRGIPPPSV-LDSALHPPPRGPFPPGDIFSQPERPFLAPGRQSV 991
+P + P P P + P + L A PPP P S P+ G S
Sbjct: 579 ASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPD----LAGHSSS 634
Query: 992 DNVTNPEKRIPLGNDNIQQEGDRDYRFPPIETRESISRP--------PPVDVRDVVGRPI 1043
T E R G D+ + G PP + + P PP+ R G P+
Sbjct: 635 ATSTPEELR---GYDSGPEGGAA--ASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPL 689
Query: 1044 --DPREGPG 1050
P GPG
Sbjct: 690 PWPPATGPG 698
Score = 51.6 bits (122), Expect = 5e-06
Identities = 100/425 (23%), Positives = 137/425 (32%), Gaps = 89/425 (20%)
Query: 653 SLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPP-----PTI 707
SL A P+S P + P RA +PSQP P + PP V PP P +
Sbjct: 241 SLSSSATPLSSPARSGPSARGTP----RAPAHPSQPKPKGLQALRPPQVTPPRKDAAPAL 296
Query: 708 PPVVPTSLVQPS-----LSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTK 762
P+ + L PS S P T+ S S+ LAT P
Sbjct: 297 GPLSSSPLATPSPSAALQSQAPPTLPATPHSS------SLTCQLAT-----------PLP 339
Query: 763 QAEPEEKVPHLIDHQISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPNVSS 822
A P P + +P+ PP + + P + +
Sbjct: 340 LAPPSPSAPPSL-----------QTLPS------------PPATPPSQATTSLGSPTLQA 376
Query: 823 NSEILGVRPSNVSSSSGIIAAQPPNILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGL 882
L PS S Q P L + P S L P PN +
Sbjct: 377 THSFL---PSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAV 433
Query: 883 VGVQPP--NVPNTPGLLGTQPPAGPQNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGPRFP 940
+Q P P+ P PPA P P + P+Q P+ L P +P +P P P
Sbjct: 434 HLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPS---LAAPPLQVPPSP-PASP 489
Query: 941 LIQPGIPPQRGIPPPSVLD--SALHPPPRGP----FPPGDIFSQPERPFLAPGRQSVDNV 994
+ P P PPP PPP+ P PP + + P P PG+
Sbjct: 490 PMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPP--LQALPSPPASFPGQAPF--- 544
Query: 995 TNPEKRIPLGNDNIQQEGDRDYRFPPIETRESISRPPPVDVRDVVGRPIDPR-EGPGRPP 1053
+P +P+ + PP+ + PP P P + P RPP
Sbjct: 545 -SPSASLPM-----SPLATPPPQAPPVLAAPLLQVPP--------SPPASPTLQAPRRPP 590
Query: 1054 LDGRD 1058
G D
Sbjct: 591 TPGPD 595
Score = 38.1 bits (87), Expect = 0.054
Identities = 91/425 (21%), Positives = 138/425 (32%), Gaps = 71/425 (16%)
Query: 681 ASFNPSQPPPGFMPP-PVPPPVVPPPTIPPVVPTSLVQPSLSMTPETVKDVGFGSLVIP- 738
A+ P+ PG + P P P PPP P + ++ P + G G IP
Sbjct: 13 AARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPE 72
Query: 739 ----------GGSVASNLATSALPAGNVFNA-PTKQAEP-------------------EE 768
G+ + N A+ +G A P K P ++
Sbjct: 73 SAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQK 132
Query: 769 KVPHLIDHQISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGI----------LGVQRP 818
+ + ++ G+ T + + +S+ A P T + + +G+ RP
Sbjct: 133 GLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRP 192
Query: 819 NVSSNSEILGVRP-SNVSSSSGIIAAQPPNILNN--SGILGIQPPSVSNSSGLLGVLPPN 875
S+ P +VSS+S +P S G+Q P+ + S P +
Sbjct: 193 APSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSS--SATPLS 250
Query: 876 IPNNSGLVGVQPPNVPNTPGLLGTQP-PAGPQNLPPLSIPNQRMPTMPMLDIRPGLIPQA 934
P SG P P P +QP P G Q L P + R P L
Sbjct: 251 SPARSGPSARGTPRAPAHP----SQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLAT 306
Query: 935 PGPRFPLIQPGIPPQRGIPPPSVLDSALHPP----PRGPFPPGDIFSQPERPFLAPGRQS 990
P P L P P S L L P P P P + + P P P + +
Sbjct: 307 PSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAT 366
Query: 991 VDNVTNPEKRIPLGNDNIQQEGDRDYRFPPIETRESISRPPPVDVRDVVGRPID-PREGP 1049
LG+ +Q + F P ++ PPP + P+ P P
Sbjct: 367 TS----------LGSPTLQ----ATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPP 412
Query: 1050 GRPPL 1054
PPL
Sbjct: 413 ASPPL 417
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 65.1 bits (157), Expect = 4e-10
Identities = 100/392 (25%), Positives = 133/392 (33%), Gaps = 78/392 (19%)
Query: 607 PVKETVQTTQSPTPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFPVSMPVP 666
P +Q+ T + T+ T + + PP++ L P A P ++L P P S P
Sbjct: 316 PSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPAS 375
Query: 667 PPGFSPIPPPP----------FLRASFNPSQPPPGFMP--PPVPPPVVPPPTIPPVVPTS 714
PP SP+ P L+A F+P PP P PP PPV P T P P S
Sbjct: 376 PP-LSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPS 434
Query: 715 LVQPSLSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLI 774
L P L + P P LA L P QA P P L
Sbjct: 435 LAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAK----PPPQAPPALATPPL- 489
Query: 775 DHQISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGILG------VQRPNVSSNSEILG 828
+ S A GQ P S S + Q P V + + +L
Sbjct: 490 ---------------QALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLA-APLLQ 533
Query: 829 VRPSNVSSSSGIIAAQPPNILNNSGILGIQ-----------PPSVSNSSGLLGVLPPNIP 877
V PS +S + +PP ++ + G + PPS S SS L G P++
Sbjct: 534 VPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSG---PDLA 590
Query: 878 NNSGLVGVQPPNVPNTPGLLGTQPPAGPQNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGP 937
+S P + + P G PP P + P + P P
Sbjct: 591 GHSSSATSTPEELRG----YDSGPEGGAAASPP--------PDAELAACHPAAWSRGPAP 638
Query: 938 RFPLIQPGIPPQRGIPPPSVLDSALHPPPRGP 969
PL G P G P P PP GP
Sbjct: 639 --PLAFRGAP---GAPLP-------WPPATGP 658
Score = 55.1 bits (131), Expect = 4e-07
Identities = 113/449 (25%), Positives = 153/449 (34%), Gaps = 95/449 (21%)
Query: 635 PPPVAMLQIPVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPP---- 690
PP V + APA+ +S P A P P PP SP PP P+ PP
Sbjct: 273 PPQVTPPRKDAAPALGPLSSSPLATP--SPSAPP--SPSAPPSLQTLPSPPATPPSQATT 328
Query: 691 -----------GFMP-PPVPPPVVPPPTIPPVVPTSLVQPSLSMTPETVKDVGFGSLVIP 738
F+P PP+ P PPP PP +L P L P L P
Sbjct: 329 SLGSPTLQATHSFLPSPPLSPLATPPPQAPP----ALALPPLQAPPSPPASPPLSPLATP 384
Query: 739 GGSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDHQISSGENTRSVIPNDISSNAAI 798
+ LA L A F+ P P + P S + V P+ + A
Sbjct: 385 SPQAPNALAVHLLQA--PFSPP---PSPPVQAPF-------SPPASPPVSPSATPPSQA- 431
Query: 799 LGGQPPNVTSNSGILGVQRPNVSSNSEILGVRPSNVSSSSGIIAAQPPNILNNSGILGIQ 858
PP++ + L V PS +S +A PP
Sbjct: 432 ----PPSLAAPP----------------LQVPPSPPASPPMSPSATPP---------PQA 462
Query: 859 PPSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVPNTPGLLGTQPPAGPQ-NLP--PLSIPN 915
PP ++ L PP P +Q +P+ P Q P P +LP PL+ P
Sbjct: 463 PPPLAAPPLQLAKPPPQAPPALATPPLQA--LPSPPASFPGQAPFSPSASLPMSPLATPP 520
Query: 916 QRMPTM---PMLDIRPGLIPQAPGPRFPLIQPGIPPQRGIPPPSV-LDSALHPPPRGPFP 971
+ P + P+L + P P +P + P P P + P + L A PPP
Sbjct: 521 PQAPPVLAAPLLQVPPS-PPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRS 579
Query: 972 PGDIFSQPERPFLAPGRQSVDNVTNPEKRIPLGNDNIQQEGDRDYRFPPIETRESISRP- 1030
P S P+ G S T E R G D+ + G PP + + P
Sbjct: 580 PSSTLSGPD----LAGHSSSATSTPEELR---GYDSGPEGGAA--ASPPPDAELAACHPA 630
Query: 1031 -------PPVDVRDVVGRPI--DPREGPG 1050
PP+ R G P+ P GPG
Sbjct: 631 AWSRGPAPPLAFRGAPGAPLPWPPATGPG 659
Score = 48.5 bits (114), Expect = 4e-05
Identities = 103/426 (24%), Positives = 136/426 (31%), Gaps = 100/426 (23%)
Query: 653 SLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPP-----PTI 707
SL A P+S P + P RA +PSQP P + PP V PP P +
Sbjct: 232 SLSSSATPLSSPARSGPSARGTP----RAPAHPSQPKPKGLQALRPPQVTPPRKDAAPAL 287
Query: 708 PPVVPTSLVQPSLSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEPE 767
P+ + L PS S P +L P + S TS +PT QA
Sbjct: 288 GPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTS-------LGSPTLQA--- 337
Query: 768 EKVPHLIDHQISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPNVSSNSEIL 827
T S +P S + L PP + +Q P S L
Sbjct: 338 ----------------THSFLP---SPPLSPLATPPPQAPPALALPPLQAPPSPPASPPL 378
Query: 828 GVRPSNVSSSSGIIAAQPPNILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQP 887
+A P N + +Q P PP+ P + P
Sbjct: 379 SP-----------LATPSPQAPNALAVHLLQAPFSP---------PPSPPVQAPFS--PP 416
Query: 888 PNVPNTPGLLGTQPPAGPQNL--PPLSIPNQRMPTMPMLDIRPGLIPQAPGPRFPLIQPG 945
+ P +P T P P +L PPL +P P P + PQAP P
Sbjct: 417 ASPPVSPS--ATPPSQAPPSLAAPPLQVPPSP-PASPPMSPSATPPPQAPPPL------A 467
Query: 946 IPPQRGIPPPSVLDSALHPPP-------------RGPFPPGDIFSQPERPFLAPGRQSVD 992
PP + PP AL PP + PF P S P P P Q+
Sbjct: 468 APPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPS--ASLPMSPLATPPPQAPP 525
Query: 993 NVTNPEKRIPLGNDNIQQEGDRDYRFPPIETRESISRPP-PVDVRDVVGRPIDPREGPGR 1051
+ P ++P P T ++ RPP P V G + PG
Sbjct: 526 VLAAPLLQVPPSP-------------PASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGP 572
Query: 1052 PPLDGR 1057
PP R
Sbjct: 573 PPPPSR 578
Score = 45.8 bits (107), Expect = 3e-04
Identities = 59/222 (26%), Positives = 81/222 (36%), Gaps = 27/222 (12%)
Query: 605 SEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFPVSMP 664
S PV+ SP PV +QA PP +A + V P+ P + P+
Sbjct: 406 SPPVQAPFSPPASP-PVSPSATPPSQA---PPSLAAPPLQVPPSPPASPPMSPSATPPPQ 461
Query: 665 VPPPGFSP-----IPPP--------PFLRASFNPSQPPPGFMP------PPVPPPVVPPP 705
PPP +P PPP P L+A +P PG P P+ P PPP
Sbjct: 462 APPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPP 521
Query: 706 TIPPVVPTSLVQ--PSLSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQ 763
PPV+ L+Q PS +P T++ P SV+ T AL G P++
Sbjct: 522 QAPPVLAAPLLQVPPSPPASP-TLQAPRRPPTPGPDTSVSGPRLTLALAPGPP-PPPSRS 579
Query: 764 AEPEEKVPHLIDHQISSGENTRSVIPNDISSNAAILGGQPPN 805
P L H S+ + D PP+
Sbjct: 580 PSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPD 621
Score = 43.9 bits (102), Expect = 0.001
Identities = 82/378 (21%), Positives = 122/378 (32%), Gaps = 70/378 (18%)
Query: 681 ASFNPSQPPPGFMPPPVP-PPVVPPPTIPPVVPTSLVQPSLSMTPETVKDVGFGSLVIPG 739
A+ P+ PG + P P P PPP P + ++ P + G G IP
Sbjct: 13 AARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPE 72
Query: 740 GSV-----------ASNLATSALPAGNVFNAP---------TKQAEP--EEKVPHLIDHQ 777
+ AS A PA N P T + P ++ + +
Sbjct: 73 SAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEET 132
Query: 778 ISSGENTRSVIPNDISSNAA------ILGGQPPNVTSNSGILGVQ--------------- 816
++ G+ T + + +S+ A G P + S G +
Sbjct: 133 VARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPP 192
Query: 817 ----RPNVSSNSEILGVRPSNVSS---SSGIIAAQPPNILNNSGILGIQPPSVSNSSGL- 868
R +VSS SE PS + S+G +P + +S + P+ S S
Sbjct: 193 TEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARG 252
Query: 869 --LGVLPPNIPNNSGLVGVQPPNVPNTPGLLGTQPPAGPQNLPPLSIPNQRMPTMPMLDI 926
P+ P GL ++PP V TP P GP + PL+ P+ P P
Sbjct: 253 TPRAPAHPSQPKPKGLQALRPPQV--TPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPP 310
Query: 927 RPGLIPQAPG-----PRFPLIQPGIPPQRGIPPPSVLDSALHPPPRGP---------FPP 972
+P P L P + P L PPP+ P PP
Sbjct: 311 SLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPP 370
Query: 973 GDIFSQPERPFLAPGRQS 990
S P P P Q+
Sbjct: 371 SPPASPPLSPLATPSPQA 388
>gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain
containing B [Homo sapiens]
Length = 546
Score = 64.7 bits (156), Expect = 5e-10
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 19/151 (12%)
Query: 345 SPSQGSSQQHFLEPEVNLDDSIDIQQQDMDIDEGQDGVEEEVFEQEAKKVAVRSRSRTHS 404
SP + S+ H E + S D ++++ ++ + +E E E+E ++ RS R
Sbjct: 272 SPRRSRSRSHHREGHGS--SSFD---RELEREKERQRLEREAKEREKERRRSRSIDRGLE 326
Query: 405 RSRSRSPRKRRSRSRSGSRK--RKHRKRSRSRSRERKRKSSRSYSSER-RAREREKERQK 461
R RSRS + RSRSRS RK R+ R R R + ER R+ R Y ER RE+E+ER +
Sbjct: 327 RRRSRSRERHRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGNEREKERERSR 386
Query: 462 KGLPPIRSKTLSVCSTTLWVGQVDKKATQQD 492
+ RS+ G+V++K ++D
Sbjct: 387 ERSKEQRSR-----------GEVEEKKHKED 406
Score = 50.8 bits (120), Expect = 8e-06
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 388 EQEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRS---RERKRKSSR 444
E E KK R H R R +K + SRS SR+RKHR RSRSR+ R R R +
Sbjct: 397 EVEEKKHKEDKDDRRH-RDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEK 455
Query: 445 SYSSERRAREREKERQKKG 463
S + ++E+ +R + G
Sbjct: 456 SSKHKNESKEKSNKRSRSG 474
Score = 50.8 bits (120), Expect = 8e-06
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 366 IDIQQQDMDIDEGQDGVEEEVFEQEAKKVAVRSRSRTH-SRSRSRSPRKRRSRSRSGSRK 424
++ ++ D D+ + ++ ++E K RSR R H SRSRSR+ KR SRSRS +
Sbjct: 398 VEEKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKR-SRSRSKEKS 456
Query: 425 RKHRKRSRSRSRERKRKSSRSYS-----SERRAREREKERQKK 462
KH+ S+ +S +R R S+ + S++R KE+ +K
Sbjct: 457 SKHKNESKEKSNKRSRSGSQGRTDSVEKSKKREHSPSKEKSRK 499
Score = 50.1 bits (118), Expect = 1e-05
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 16/116 (13%)
Query: 361 NLDDSIDIQQQDMDIDEGQDGVEEEVFEQEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRS 420
N+D I + + + D G++G EE E + RSRS S S RSPR+ RSRS
Sbjct: 228 NIDQQIKTRPRKIKKD-GKEGAEEIDRHVERR----RSRSPRRSLSPRRSPRRSRSRSH- 281
Query: 421 GSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQK-----KGLPPIRSKT 471
+ H S R ER+++ R ER A+EREKER++ +GL RS++
Sbjct: 282 --HREGHGSSSFDRELEREKERQRL---EREAKEREKERRRSRSIDRGLERRRSRS 332
Score = 49.7 bits (117), Expect = 2e-05
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 369 QQQDMDIDEGQDGVEEEVFEQEAKKVAVRSRSRTHSRSRS--RSPRKRRSRSRSGSRKRK 426
+ +D D + G + +E +E K RSR + + R+ R R +++K
Sbjct: 366 RDRDYDKERGNEREKERERSRERSKEQ-RSRGEVEEKKHKEDKDDRRHRDDKRDSKKEKK 424
Query: 427 HRKRSRSRSRERKRKS-SRSYSSERRAREREKERQKK 462
H SRSRSRERK +S SRS ++ +R+R R KE+ K
Sbjct: 425 H---SRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSK 458
Score = 45.8 bits (107), Expect = 3e-04
Identities = 43/132 (32%), Positives = 61/132 (46%), Gaps = 15/132 (11%)
Query: 341 EHSASPSQGSSQQHFLEPEVNLDDSIDIQQQDMDIDEGQDGVEEEVFEQEAKKVAVRSRS 400
E S S+ + +E + + +D D + +D D ++ +E K RSRS
Sbjct: 383 ERSRERSKEQRSRGEVEEKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSRERKH---RSRS 439
Query: 401 RTHS---RSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSR------ERKRKSSRSYSSER- 450
R+ + RSRSRS K +S K K KRSRS S+ E+ +K S S E+
Sbjct: 440 RSRNAGKRSRSRS--KEKSSKHKNESKEKSNKRSRSGSQGRTDSVEKSKKREHSPSKEKS 497
Query: 451 RAREREKERQKK 462
R R R KER K
Sbjct: 498 RKRSRSKERSHK 509
Score = 43.1 bits (100), Expect = 0.002
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 383 EEEVFEQEAKKVAVRSRSRTHS----RSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRER 438
+ E E+ K+ S+ RT S + R SP K +SR RS S++R H KR S S+++
Sbjct: 460 KNESKEKSNKRSRSGSQGRTDSVEKSKKREHSPSKEKSRKRSRSKERSH-KRDHSDSKDQ 518
Query: 439 KRKSSRSYSSERRAREREKERQKK 462
K R S +EK+ + K
Sbjct: 519 SDKHDRRRSQSIEQESQEKQHKNK 542
Score = 34.3 bits (77), Expect = 0.78
Identities = 35/173 (20%), Positives = 76/173 (43%), Gaps = 19/173 (10%)
Query: 274 EHSEEPKKEIPASQLSHVSESVNNSIFHQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDS 333
E S+E + + H + + H+ ++ ++ +H R + E++ ++ +++
Sbjct: 387 ERSKEQRSRGEVEEKKHKEDKDDRR--HRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNA 444
Query: 334 QEGTFGSEHSASPSQGSSQQHFLEPEVNLDDSIDIQQQDMDIDEGQDGVEEEVFEQEAKK 393
+ S S S+ S +H E + ++ + G G + V E+ K+
Sbjct: 445 ------GKRSRSRSKEKSSKHKNESK---------EKSNKRSRSGSQGRTDSV-EKSKKR 488
Query: 394 VAVRSRSRTHSRSRSRSPRKRRSRSRSGSRKRKH-RKRSRSRSRERKRKSSRS 445
S+ ++ RSRS+ +R S S + KH R+RS+S +E + K ++
Sbjct: 489 EHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEQESQEKQHKN 541
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 64.3 bits (155), Expect = 7e-10
Identities = 108/451 (23%), Positives = 138/451 (30%), Gaps = 53/451 (11%)
Query: 636 PPVAMLQIPVA-PAVPTV--SLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPP--P 690
PP A P PA P+ + PPA P P +P P + P P P
Sbjct: 988 PPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSP 1047
Query: 691 GFMPPPVPPPVVPPPTIP-----PVVPTSLVQPSL-SMTPETVKDVGFGSLVIPGGSVAS 744
P P P P T+P P P+ P+ + TP + K G + P G+
Sbjct: 1048 AATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPK--GGPATPSPKGAPMP 1105
Query: 745 NLATSALPAGNVFNAP------TKQAEPEEKVPHLIDHQISSGENTRSVIPNDISSNAAI 798
AT P G + P T A P L T + P S
Sbjct: 1106 PAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATP---PSPKGG 1162
Query: 799 LGGQPPNVTSNSGILGVQRPNVSSNSEILGVRPSNVSSSSGIIAAQPPNILNNSGILGIQ 858
L PP + P + S G+ + + AA PP+ G+
Sbjct: 1163 LATPPPKGAPTT-------PAATPPSPKGGLATPSPKGAPTTPAATPPSPKG-----GLA 1210
Query: 859 PPSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVPNTPGLLGTQPPAGPQNLPPLSIPNQRM 918
PS + PP+ GL P P TP P GP PP P
Sbjct: 1211 TPSPKGAPTTPAATPPS--PKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPA 1268
Query: 919 PTMPMLDIRPGLIPQAPGPRFPLIQPGIP-------PQRGIP------PPSVLDSALHPP 965
T P L P P ++ P P P +G P PPS S PP
Sbjct: 1269 ATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPP 1328
Query: 966 PRG-PFPPGDIFSQPERPFLAPGR--QSVDNVTNP-EKRIPLGNDNIQQEGDRDYRFPPI 1021
P+G P PP P+ P S T P K P PP
Sbjct: 1329 PKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPS 1388
Query: 1022 ETRESISRPPPVDVRDVVGRPIDPREGPGRP 1052
R P D P+ P++ P P
Sbjct: 1389 PKRGPAIPSPKGDPTSPAVIPLSPKKAPATP 1419
Score = 55.8 bits (133), Expect = 2e-07
Identities = 119/504 (23%), Positives = 140/504 (27%), Gaps = 111/504 (22%)
Query: 630 QAEVFPPPVAMLQIPVAPAVPTVSLVPPAFPVSMPVPP-PGFSPIPP---PPFLRASFNP 685
+A P P + P PT P P P P P ++P PP PP +
Sbjct: 920 KARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPAT 979
Query: 686 SQP-----PPGFMPP--------------PVPPPVVPPPTIPPVVPTSLVQPSLSMTPET 726
P PP PP P PP V PP P P + P + TP
Sbjct: 980 PSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPS--PKGSPAATPFPKGASTPPA 1037
Query: 727 VKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDHQISSGENTRS 786
P GS A+ P P+ + P P L S
Sbjct: 1038 ATPPS------PKGSPAATPLPKGAPTTPAATLPSPKGGP--ATPSLKGAPTPPAATPPS 1089
Query: 787 VIPNDISSNAAILGG-QPPNVTSNSGILGVQRPNVSSNSEILGVRPSNVSSSSGIIAAQP 845
P + + G PP T S G+ P P S G +A P
Sbjct: 1090 --PKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATP---PSPKGGLATPP 1144
Query: 846 PNIL---------NNSGILGIQPPS----------VSNSSGLLGVLPPNIPN-------- 878
P + G L PP S GL P P
Sbjct: 1145 PKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPS 1204
Query: 879 -NSGLVGVQPPNVPNTPGLLGTQPPAGPQNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGP 937
GL P P TP P G P P T P P P P
Sbjct: 1205 PKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAP 1264
Query: 938 RFPLIQP-------GIPPQRGIPPPSVL-------DSALHPPPRGPFPPGDIFSQPERPF 983
P P PP +G P P+V+ A PP P PP + P P
Sbjct: 1265 TPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPA---ATPPSPK 1321
Query: 984 LAPGRQSVDNVTNPEKRIPLGNDNIQQEGDRDYRFPPIETRESISRPP--PVDVRDVVGR 1041
+PG T P K P PP T S P P G
Sbjct: 1322 GSPG-------TPPPKGAPT---------------PPAVTPPSPKGTPTLPATTPSSKGG 1359
Query: 1042 PIDP--REGPGRPPLDGRDHFGRP 1063
P P +EGP PP H G P
Sbjct: 1360 PTTPSSKEGP-TPPAATPSHKGGP 1382
Score = 55.5 bits (132), Expect = 3e-07
Identities = 110/464 (23%), Positives = 167/464 (35%), Gaps = 69/464 (14%)
Query: 619 TPVEKETVVT-TQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFPVSMPVP------PPGFS 671
TPV +E T ++ ++ PP V + + APA + PA P S P PP
Sbjct: 1418 TPVTREGAATPSKGDLTPPAVTPVSLKKAPAT-SAPKGGPATPSSKGDPTLPAVTPPSPK 1476
Query: 672 PIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPP--PTIPPVVPTS------LVQPSLSM- 722
P P + S +P + P P P+ P +P P+ P VP + + P+ ++
Sbjct: 1477 EPPAPKQVATSSSPKKAPA--TPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLL 1534
Query: 723 ---TPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDHQIS 779
TP T+ +L+ P +V S T A+P AP + E P +
Sbjct: 1535 SKKTPATLAPK--EALIPPAMTVPSPKKTPAIPTPK--EAPATPSSKEASSPPAVTPSTY 1590
Query: 780 SGENT--RSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPNVSSNSEILGVRPSNVSSS 837
G + +IP ++S + PP VT S G P V PS++ S
Sbjct: 1591 KGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDS 1650
Query: 838 SGIIAAQPPNILNNSGILGIQP----PSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVPNT 893
P ++ G Q P+ + L VL P ++ ++ P T
Sbjct: 1651 ----PTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQT 1706
Query: 894 PGLLGTQPPAGPQNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGPRFPLIQPGIPPQRGIP 953
T PP P P + + P L AP P P+ + +G
Sbjct: 1707 KKSSATSPPICPD---PSAKNGSKGP----------LSTVAPAPLLPVQKDSSKTAKG-- 1751
Query: 954 PPSVLDSALHPPPRGPF-PPGDIFSQP------ERPFLAPGRQSVDNVTNPEKRIPLGND 1006
A H P+GP PP S P E+ P SV +P +PL
Sbjct: 1752 -----KDASH-SPKGPLAPPESKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPS 1805
Query: 1007 NIQQEGDRDYRFP--PIETRESISRP-PPVDVRDVVGRPIDPRE 1047
+ + P P ES S+P P D +++ P+ P E
Sbjct: 1806 PVPTLPPKQQFLPSSPGLVLESPSKPLAPADEDELL--PLIPPE 1847
Score = 53.5 bits (127), Expect = 1e-06
Identities = 103/438 (23%), Positives = 145/438 (33%), Gaps = 98/438 (22%)
Query: 600 ETVKSSEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVAMLQIPVAPAV---------- 649
+ SS P K P + ++ EV P + + P+AP
Sbjct: 1483 QVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEV-PATPSSRRDPIAPTATLLSKKTPAT 1541
Query: 650 --PTVSLVPPAFPVSMP-----VPPPGFSPIPP-------PPFLRASFNPSQPPPG--FM 693
P +L+PPA V P +P P +P P PP + S P P +
Sbjct: 1542 LAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLI 1601
Query: 694 PP----------PVPPPVVPP--------------PTIPPVVPTSLVQPSLSMTPETVKD 729
PP P PP V PP PT PPV P+SL S T K
Sbjct: 1602 PPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCK- 1660
Query: 730 VGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDHQISSGENTRSVIP 789
+P S V AP ++ P +I G T+
Sbjct: 1661 ---MGATVPQASKGLPAKKGPTALKEVLVAPAPESTP------IITAPTRKGPQTKK--- 1708
Query: 790 NDISSNAAILGGQPPNVTSNSGILGVQRPNVSSNSEILGVRPSNVSSSSGIIAAQPPNIL 849
S+ + + P + G L P + +L V+ + ++ G A+ P
Sbjct: 1709 --SSATSPPICPDPSAKNGSKGPLSTVAP-----APLLPVQKDSSKTAKGKDASHSP--- 1758
Query: 850 NNSGILGIQPPSVSNSSGLLG-----VLPPNIPNNSGLVGVQPPNVPNTPGLLGTQPPAG 904
G L PP S+ L VLP P ++ + P V P
Sbjct: 1759 --KGPLA--PPESKASTPLTAAAFEKVLPK--PESASVSAAPSPPV---------SLPLA 1803
Query: 905 PQNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGPRFPLIQPGIPPQ---RGIPPPSVLDSA 961
P +P L Q +P+ P L + P AP L+ P IPP+ G+P SVL +
Sbjct: 1804 PSPVPTLPPKQQFLPSSPGLVLESPSKPLAPADEDELL-PLIPPEPISGGVPFQSVLVNM 1862
Query: 962 LHPPPRGPFPPGDIFSQP 979
P G P QP
Sbjct: 1863 PTPKSAGIPVPTPSAKQP 1880
Score = 47.8 bits (112), Expect = 7e-05
Identities = 104/455 (22%), Positives = 143/455 (31%), Gaps = 64/455 (14%)
Query: 628 TTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFPVSMPV-PPPGFSPIPP---PPFLRASF 683
TT A P P L P PT P P P PPP +P PP PP L+
Sbjct: 1219 TTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGL 1278
Query: 684 NPSQPPPGFMPPPVPPPVVP------PPTIPP---VVPTSLVQPSLSMTPETVKDVGFGS 734
P P P V P P T PP P + PS +P T G+
Sbjct: 1279 ----ATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPK--GA 1332
Query: 735 LVIPGGSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDHQISSGENTRSVIPNDISS 794
P + S T LPA P+ + P SS E P ++
Sbjct: 1333 PTPPAVTPPSPKGTPTLPA----TTPSSKGGPTTP---------SSKEG-----PTPPAA 1374
Query: 795 NAAILGGQPPNVTSNSGILGVQRPNVSSNSEILGVRPSNVSSSSGIIAAQPPNILNNSGI 854
+ GG P +T S G P+ + V P + + + + G
Sbjct: 1375 TPSHKGG--PAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKG- 1431
Query: 855 LGIQPPSV---------SNSSGLLGVLPPNIPNNSGLVGVQPPNVPNTPGLLGTQPPAGP 905
+ PP+V + S+ G P+ + L V PP+ P + P
Sbjct: 1432 -DLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSP 1490
Query: 906 QNLPPLSIPNQRMPTMP-MLDIRPGLIPQAPGPRFPLIQPGIPPQRGIPPPSVLDSALHP 964
+ P P PT+P ++ P +P P R I P P ++
Sbjct: 1491 KKAPATPAP-MGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALI 1549
Query: 965 PPRGPFPPGDIFSQPERPFLAPGRQSVDNVTNPEKRIPLGNDNIQQEGDRDYRFPPIETR 1024
PP P P AP S ++P P + ++ PP T
Sbjct: 1550 PPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTP--STYKGAPSPKELLIPPAVTS 1607
Query: 1025 ES---ISRPPPVDVRDVVGRPIDPREGPGRPPLDG 1056
S PP V P P +GP P G
Sbjct: 1608 PSPKEAPTPPAV-------TPPSPEKGPATPAPKG 1635
Score = 45.4 bits (106), Expect = 3e-04
Identities = 85/388 (21%), Positives = 150/388 (38%), Gaps = 78/388 (20%)
Query: 624 ETVVTTQAEVFPPPVAMLQIPVAPAV--------PTVSLVPPAFPVSMPVPPPG---FSP 672
ETV T+ E+ P +P++ A+ P +L PP P P SP
Sbjct: 7 ETVPATEQELPQPQAETAVLPMSSALSVTAALGQPGPTLPPPCSPAPQQCPLSAANQASP 66
Query: 673 IPPP----------PFLRASFNPSQP------PPGFMPPPVPPPVVPPP---TIPPVVPT 713
P P PF ++S + P P F+P + PP+ P P + PT
Sbjct: 67 FPSPSTIASTPLEVPFPQSSSGTALPLGTAPEAPTFLPNLIGPPISPAALALASPMIAPT 126
Query: 714 SLVQPS-------LSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNV--FNAPTKQA 764
PS +++ P +V+ S P + S + + +G+V +AP +
Sbjct: 127 LKGTPSSSAPLALVALAPHSVQK----SSAFPPNLLTSPPSVAVAESGSVITLSAPIAPS 182
Query: 765 EPEEKVPHLIDHQISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPNVSSNS 824
EP+ + + + + + T S P I S P + SG+ + + ++
Sbjct: 183 EPKTNLNKVPSEVVPNPKGTPS--PPCIVSTVP-YHCVTPMASIQSGVASLPQTTPTTTL 239
Query: 825 EILGVRPSNVSSSSGIIAAQPPNILNNSGILGIQPPSVSNSSGLLGVL-----------P 873
I + + + SS +I+ Q P L+ G + P ++S S+ L V+ P
Sbjct: 240 AIASPQVKDTTISSVLISPQNPGSLSLKGPVS-PPAALSLSTQSLPVVTSSQKTAGPNTP 298
Query: 874 PNIPNNSG---------------LVGVQPPNVPNTPGLLGTQPPAGPQNLPPLSIPNQRM 918
P+ P + G L+G P+ + P + + + + S P+QR
Sbjct: 299 PDFPISLGSHLAPLHQSSFGSVQLLGQTGPSALSDPTV---KTISVDHSSTGASYPSQR- 354
Query: 919 PTMPMLDIRPGLIPQAPGPRFPLIQPGI 946
+P L R ++P A FP++ P +
Sbjct: 355 SVIPPLPSRNEVVP-ATVAAFPVVAPSV 381
Score = 43.5 bits (101), Expect = 0.001
Identities = 96/434 (22%), Positives = 144/434 (33%), Gaps = 82/434 (18%)
Query: 607 PVKETVQTTQSPTPVE-KETVVTTQAEVFPPPVAM--------LQIPVAPAVPTVSLVPP 657
P + TT + TP K T + P P A L P P ++V P
Sbjct: 1235 PSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTP 1294
Query: 658 AFPVSMPVP-PPGFSPIPP---PPFLRASFNPSQPPPGFMPPPVPPPVVPP-----PTIP 708
P P PP +P PP PP + S P PPP P PP V PP PT+P
Sbjct: 1295 PSPKGGPATSPPKGAPTPPAATPPSPKGS--PGTPPP--KGAPTPPAVTPPSPKGTPTLP 1350
Query: 709 ---------PVVPTSLVQPSLSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNA 759
P P+S P+ P G + P S P G+ +
Sbjct: 1351 ATTPSSKGGPTTPSSKEGPT---PPAATPSHKGGPAMTPPSPKRGPAIPS--PKGDPTSP 1405
Query: 760 PTKQAEPEEKVPHLIDHQISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPN 819
P++ + + ++ + + P ++ + + P ++ G G P+
Sbjct: 1406 AVIPLSPKKAPATPVTREGAATPSKGDLTPPAVT---PVSLKKAPATSAPKG--GPATPS 1460
Query: 820 VSSNSEILGVRPSNVSSSSGIIAAQPPNILNNSGILGIQPPSVSNSSGLLG--VLPPNIP 877
+ + V P + P + +S P + +G LP IP
Sbjct: 1461 SKGDPTLPAVTPPSPKEPPA-----PKQVATSS-----SPKKAPATPAPMGAPTLPAVIP 1510
Query: 878 NNSGLVGVQP-----PNVP-------NTPGLLGTQ----PPA----GPQNLPPLSIPNQR 917
++ V P P P TP L + PPA P+ P + P +
Sbjct: 1511 SSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEA 1570
Query: 918 MPTMPMLD------IRPGLIPQAPGPRFPLIQPGI---PPQRGIPPPSVLDSALHPPPRG 968
T + + P AP P+ LI P + P+ PP+V + P
Sbjct: 1571 PATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPAT 1630
Query: 969 PFPPGDIFSQPERP 982
P P G S P P
Sbjct: 1631 PAPKGTPTSPPVTP 1644
Score = 38.9 bits (89), Expect = 0.032
Identities = 92/420 (21%), Positives = 139/420 (33%), Gaps = 51/420 (12%)
Query: 576 VKVDDLEGFAEGGMIDQETVNTEWETVKSSEPVKETVQTTQSPTPVEKETVVTTQAEVFP 635
+K D G G + + ++ T ++ P++ +PT + + TT A F
Sbjct: 621 IKTDSYAGPDSAGPLLKSSLITP---TVAAFPLESADPAGVAPTTAKGTSTYTTTASPFL 677
Query: 636 P----------PVAMLQIPVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNP 685
PV + P VPT S P P P + + P ++ +P
Sbjct: 678 EGTVSLAPKNHPVKEGTLTTLPLVPTASENCPVAPSPQNTCAPLATLVLAPEIPKSVPSP 737
Query: 686 SQPPPGFMPPPVPPPVVPPPT--IPPVVPTSLVQPSLSMTPETVKDVGFGSLVIPGGSVA 743
S PP G PP T + + TS + P S E + S
Sbjct: 738 SLPPAG----------TPPGTKKVDGISHTSALAPVASSPKECPTEDSGASATASSKGTL 787
Query: 744 SNLATSALPAGNVFNAPTKQAEPEEKVPHLIDHQISSGENTRSVIPNDIS----SNAAIL 799
+ LA S P G V +P + P +K D I G + V P + S ++ +
Sbjct: 788 TYLADSPSPLG-VSVSPQTKRPPTKKGSAGPDTPI--GNLSSPVSPVEASFLPENSLSFQ 844
Query: 800 GGQPPNVTSNSGILGVQRPNVSSNSEILGVRPSNVSSSSGIIAAQPPNILNNSGILGIQP 859
G + T++S P S PS V+ S PP ++ +
Sbjct: 845 GSKDSPATTHS-------PTPPSPKG--APTPSAVTPLSPKGVTLPPKETPTPSVVNLPF 895
Query: 860 PSVSNSSGLLGVLPPNIPNNSGLVGVQ----PPNVPNTPGLLGTQPPAGPQNLPPLSIPN 915
P ++ P +S + P +P +P G P P PP
Sbjct: 896 PKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGA--PTPPAATPPSPKGG 953
Query: 916 QRMPTMPMLDIRPGLIPQAP--GPRFPLIQPGIPPQRGIPPPSVLDSALHPPPRG-PFPP 972
P+ P P +P GP P G P PPS P P+G P PP
Sbjct: 954 PATPSPKWAPTPPAATPPSPKGGPATP-SPKGAPTPPAATPPSPKGGPATPSPKGAPTPP 1012
Score = 37.0 bits (84), Expect = 0.12
Identities = 70/338 (20%), Positives = 114/338 (33%), Gaps = 60/338 (17%)
Query: 658 AFPVSMPVPPPGFS------------PIPPP-PFLRASFNPSQPPPGFMPPPVPPPVVPP 704
AFP ++ PP + PI P P + PS+ P P PP +V
Sbjct: 152 AFPPNLLTSPPSVAVAESGSVITLSAPIAPSEPKTNLNKVPSEVVPNPKGTPSPPCIVST 211
Query: 705 PTIPPVVPTSLVQPSLSMTPET------------VKDVGFGSLVIPGGSVASNLATSALP 752
V P + +Q ++ P+T VKD S++I S +L
Sbjct: 212 VPYHCVTPMASIQSGVASLPQTTPTTTLAIASPQVKDTTISSVLI------SPQNPGSLS 265
Query: 753 AGNVFNAPTKQAEPEEKVPHLIDHQISSGENTRSVIPNDISSNAA-----------ILGG 801
+ P + + +P + Q ++G NT P + S+ A +LG
Sbjct: 266 LKGPVSPPAALSLSTQSLPVVTSSQKTAGPNTPPDFPISLGSHLAPLHQSSFGSVQLLGQ 325
Query: 802 QPPNVTSNSGILGVQRPNVS------SNSEILGVRPSNVSSSSGIIAAQPPNILNNSGIL 855
P+ S+ + + + S S ++ PS +AA P
Sbjct: 326 TGPSALSDPTVKTISVDHSSTGASYPSQRSVIPPLPSRNEVVPATVAAFP---------- 375
Query: 856 GIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVPNTPGLLGTQPPAGPQNLPPLSIPN 915
+ PSV + + + P+ S V P T +L + P A +P
Sbjct: 376 -VVAPSVDKGPSTISSITCS-PSGSLNVATSFSLSPTTSLILKSSPNATYHYPLVAQMPV 433
Query: 916 QRMPTMPMLDIRPGLIPQAPGPRFPLIQPGIPPQRGIP 953
+ T P++ P I AP F + PP P
Sbjct: 434 SSVGTTPLVVTNPCTIAAAPTTTFEVATCVSPPMSSGP 471
>gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo sapiens]
Length = 2603
Score = 64.3 bits (155), Expect = 7e-10
Identities = 81/337 (24%), Positives = 121/337 (35%), Gaps = 34/337 (10%)
Query: 652 VSLVPPAFPVSMPVPPPGFSPIPPPPFLRA-----SFNPSQPPP------GFMPPPVPPP 700
V+ V P FPVS+P+ PPP F A +F +PP G PP
Sbjct: 1870 VNNVRPGFPVSLPL------AYPPPQFAHALLAAQTFQQIRPPRLPMTHFGGTFPPAQST 1923
Query: 701 VVPPPTIPPVVPTSLVQPSLSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAP 760
P P P + P M P GS V GS+ S+ T+ + +
Sbjct: 1924 WGPFPVRPLSPARATNSPKPHMVPRHSNQNSSGSQVNSAGSLTSSPTTTTSSSASTVPGT 1983
Query: 761 TKQAEPEEKVPHLIDHQISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPNV 820
+ P P + + T + +++ A+ P N T P
Sbjct: 1984 STNGSPSS--PSVRRQLFVTVVKTSNATTTTVTTTASNNNTAPTNATYPMPTAKEHYPVS 2041
Query: 821 SSNSEILGVRPSNVSSSSGII--AAQPPNILNNSGILGIQPPSVSNSSGLLGVLPPNIPN 878
S +S +P VS +S + +A P + ++S PP V ++ PPN +
Sbjct: 2042 SPSSPSPPAQPGGVSRNSPLDCGSASPNKVASSSEQEAGSPPVVETTN----TRPPNSSS 2097
Query: 879 NSGLVGVQPPNVPNTPGLLGTQ--PPAGPQNLPPLSIPNQRMPTMPM-LDIRPGLIPQAP 935
+SG N PG + + PP +PP P RM P+ P +P
Sbjct: 2098 SSGSSSAH-SNQQQPPGSVSQEPRPPLQQSQVPP---PEVRMTVPPLATSSAPVAVPSTA 2153
Query: 936 GPRFPLIQPGIPPQRGIPPPSVLDSALHPPPRGPFPP 972
+P+ P P P P + A+ PPP G P
Sbjct: 2154 PVTYPM--PQTPMGCPQPTPKMETPAIRPPPHGTTAP 2188
Score = 40.0 bits (92), Expect = 0.014
Identities = 92/366 (25%), Positives = 130/366 (35%), Gaps = 73/366 (19%)
Query: 593 ETVNTEWETVKSSEPVKETVQTTQSPT-PVEKETVVTTQAEVFPPPVAMLQIPVAPAVPT 651
ET NT SS Q P V +E Q PPP + +P
Sbjct: 2086 ETTNTRPPNSSSSSGSSSAHSNQQQPPGSVSQEPRPPLQQSQVPPPEVRMTVPPLATSSA 2145
Query: 652 VSLVPPAFPVSMPVP-PPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTI--- 707
VP PV+ P+P P P P P + P PP G P V ++
Sbjct: 2146 PVAVPSTAPVTYPMPQTPMGCPQPTPKMETPAIRP--PPHGTTAPHKNSASVQNSSVAVL 2203
Query: 708 -------PPVVPTSLVQPSLSMTPETVKDVGFGSLVIPGGSVASNLATSALPAG---NVF 757
P VP+S+ PS T + + V P + ++ LP G +F
Sbjct: 2204 SVNHIKRPHSVPSSVQLPSTLSTQSACQ-----NSVHPANKPIAPNFSAPLPFGPFSTLF 2258
Query: 758 -NAPT------------KQAEPEEKVPHLIDHQISSGENTRSVIPND----ISSNAAILG 800
N+PT Q+ PE + SG++ S +PN S + G
Sbjct: 2259 ENSPTSAHAFWGGSVVSSQSTPESML---------SGKS--SYLPNSDPLHQSDTSKAPG 2307
Query: 801 GQPP---NVTSNSGILGVQRP--NVSSNSEILGVRPSNVSSS---------SGIIAAQPP 846
+PP S SGI+ + P +V+ +S LG SN+S G AA
Sbjct: 2308 FRPPLQRPAPSPSGIVNMDSPYGSVTPSSTHLGNFASNISGGQMYGPGAPLGGAPAAANF 2367
Query: 847 NILNNSGILGIQP-PSVSNSSGLLGV-----LPPNIPNNSGLVGVQPPNVP---NTPGLL 897
N + S + + P S SN S V P P++ L +P NV P +
Sbjct: 2368 NRQHFSPLSLLTPCSSASNDSSAQSVSSGVRAPSPAPSSVPLGSEKPSNVSQDRKVPVPI 2427
Query: 898 GTQPPA 903
GT+ A
Sbjct: 2428 GTERSA 2433
>gi|38683816 ankyrin repeat domain protein 17 isoform b [Homo sapiens]
Length = 2352
Score = 64.3 bits (155), Expect = 7e-10
Identities = 81/337 (24%), Positives = 121/337 (35%), Gaps = 34/337 (10%)
Query: 652 VSLVPPAFPVSMPVPPPGFSPIPPPPFLRA-----SFNPSQPPP------GFMPPPVPPP 700
V+ V P FPVS+P+ PPP F A +F +PP G PP
Sbjct: 1619 VNNVRPGFPVSLPL------AYPPPQFAHALLAAQTFQQIRPPRLPMTHFGGTFPPAQST 1672
Query: 701 VVPPPTIPPVVPTSLVQPSLSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAP 760
P P P + P M P GS V GS+ S+ T+ + +
Sbjct: 1673 WGPFPVRPLSPARATNSPKPHMVPRHSNQNSSGSQVNSAGSLTSSPTTTTSSSASTVPGT 1732
Query: 761 TKQAEPEEKVPHLIDHQISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPNV 820
+ P P + + T + +++ A+ P N T P
Sbjct: 1733 STNGSPSS--PSVRRQLFVTVVKTSNATTTTVTTTASNNNTAPTNATYPMPTAKEHYPVS 1790
Query: 821 SSNSEILGVRPSNVSSSSGII--AAQPPNILNNSGILGIQPPSVSNSSGLLGVLPPNIPN 878
S +S +P VS +S + +A P + ++S PP V ++ PPN +
Sbjct: 1791 SPSSPSPPAQPGGVSRNSPLDCGSASPNKVASSSEQEAGSPPVVETTN----TRPPNSSS 1846
Query: 879 NSGLVGVQPPNVPNTPGLLGTQ--PPAGPQNLPPLSIPNQRMPTMPM-LDIRPGLIPQAP 935
+SG N PG + + PP +PP P RM P+ P +P
Sbjct: 1847 SSGSSSAH-SNQQQPPGSVSQEPRPPLQQSQVPP---PEVRMTVPPLATSSAPVAVPSTA 1902
Query: 936 GPRFPLIQPGIPPQRGIPPPSVLDSALHPPPRGPFPP 972
+P+ P P P P + A+ PPP G P
Sbjct: 1903 PVTYPM--PQTPMGCPQPTPKMETPAIRPPPHGTTAP 1937
Score = 40.0 bits (92), Expect = 0.014
Identities = 92/366 (25%), Positives = 130/366 (35%), Gaps = 73/366 (19%)
Query: 593 ETVNTEWETVKSSEPVKETVQTTQSPT-PVEKETVVTTQAEVFPPPVAMLQIPVAPAVPT 651
ET NT SS Q P V +E Q PPP + +P
Sbjct: 1835 ETTNTRPPNSSSSSGSSSAHSNQQQPPGSVSQEPRPPLQQSQVPPPEVRMTVPPLATSSA 1894
Query: 652 VSLVPPAFPVSMPVP-PPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTI--- 707
VP PV+ P+P P P P P + P PP G P V ++
Sbjct: 1895 PVAVPSTAPVTYPMPQTPMGCPQPTPKMETPAIRP--PPHGTTAPHKNSASVQNSSVAVL 1952
Query: 708 -------PPVVPTSLVQPSLSMTPETVKDVGFGSLVIPGGSVASNLATSALPAG---NVF 757
P VP+S+ PS T + + V P + ++ LP G +F
Sbjct: 1953 SVNHIKRPHSVPSSVQLPSTLSTQSACQ-----NSVHPANKPIAPNFSAPLPFGPFSTLF 2007
Query: 758 -NAPT------------KQAEPEEKVPHLIDHQISSGENTRSVIPND----ISSNAAILG 800
N+PT Q+ PE + SG++ S +PN S + G
Sbjct: 2008 ENSPTSAHAFWGGSVVSSQSTPESML---------SGKS--SYLPNSDPLHQSDTSKAPG 2056
Query: 801 GQPP---NVTSNSGILGVQRP--NVSSNSEILGVRPSNVSSS---------SGIIAAQPP 846
+PP S SGI+ + P +V+ +S LG SN+S G AA
Sbjct: 2057 FRPPLQRPAPSPSGIVNMDSPYGSVTPSSTHLGNFASNISGGQMYGPGAPLGGAPAAANF 2116
Query: 847 NILNNSGILGIQP-PSVSNSSGLLGV-----LPPNIPNNSGLVGVQPPNVP---NTPGLL 897
N + S + + P S SN S V P P++ L +P NV P +
Sbjct: 2117 NRQHFSPLSLLTPCSSASNDSSAQSVSSGVRAPSPAPSSVPLGSEKPSNVSQDRKVPVPI 2176
Query: 898 GTQPPA 903
GT+ A
Sbjct: 2177 GTERSA 2182
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.133 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,261,022
Number of Sequences: 37866
Number of extensions: 4022400
Number of successful extensions: 58814
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 1398
Number of HSP's that attempted gapping in prelim test: 19871
Number of HSP's gapped (non-prelim): 17675
length of query: 1271
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1157
effective length of database: 13,930,794
effective search space: 16117928658
effective search space used: 16117928658
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.