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Search of human proteins with 62241036
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|62241036 hypothetical protein LOC541565 [Homo sapiens]
(365 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|62241036 hypothetical protein LOC541565 [Homo sapiens] 747 0.0
gi|150418009 transforming, acidic coiled-coil containing protein... 42 9e-04
gi|239754368 PREDICTED: hypothetical protein [Homo sapiens] 39 0.010
gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo ... 39 0.010
gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo ... 39 0.010
gi|47132519 Ras association and pleckstrin homology domains 1 is... 38 0.012
gi|151301053 RNA binding motif protein 33 [Homo sapiens] 37 0.036
gi|27502386 nuclear factor of activated T-cells, cytosolic compo... 36 0.047
gi|95147559 ankyrin repeat domain 43 [Homo sapiens] 36 0.047
gi|58082089 hypothetical protein LOC161394 [Homo sapiens] 36 0.047
gi|116812616 RecQ protein-like 4 [Homo sapiens] 36 0.062
gi|169167792 PREDICTED: similar to hCG1745223 [Homo sapiens] 35 0.11
gi|88987622 PREDICTED: similar to hCG1745223 [Homo sapiens] 35 0.11
gi|209977097 tripartite motif-containing 66 [Homo sapiens] 35 0.11
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 35 0.11
gi|55741447 pleckstrin homology domain containing, family H (wit... 35 0.11
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 35 0.11
gi|157412263 cyclin M1 [Homo sapiens] 35 0.14
gi|169174618 PREDICTED: family with sequence similarity 75, memb... 34 0.18
gi|239743732 PREDICTED: family with sequence similarity 75, memb... 34 0.18
gi|153791826 hypothetical protein LOC26165 [Homo sapiens] 34 0.18
gi|165377334 hypothetical protein LOC727905 [Homo sapiens] 34 0.18
gi|4557317 annexin A11 [Homo sapiens] 34 0.24
gi|22165433 annexin A11 [Homo sapiens] 34 0.24
gi|22165431 annexin A11 [Homo sapiens] 34 0.24
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 34 0.24
gi|46094081 development and differentiation enhancing factor 1 [... 34 0.24
gi|118918423 hypothetical protein LOC286207 [Homo sapiens] 34 0.24
gi|157743257 POU domain, class 6, transcription factor 2 [Homo s... 34 0.24
gi|239755981 PREDICTED: hypothetical protein XP_002344766 [Homo ... 33 0.31
>gi|62241036 hypothetical protein LOC541565 [Homo sapiens]
Length = 365
Score = 747 bits (1929), Expect = 0.0
Identities = 365/365 (100%), Positives = 365/365 (100%)
Query: 1 MMGRRRAFAVDGRDGAGEGLARGCIVPGVTSTYRRIPDAAHGCSSWERGDKFRGVGREAL 60
MMGRRRAFAVDGRDGAGEGLARGCIVPGVTSTYRRIPDAAHGCSSWERGDKFRGVGREAL
Sbjct: 1 MMGRRRAFAVDGRDGAGEGLARGCIVPGVTSTYRRIPDAAHGCSSWERGDKFRGVGREAL 60
Query: 61 FLKLASRDSGVEMAVGDSPLAALPGLSQDSLDFESSGSSEPPAQVGRLLASQKLGEVLER 120
FLKLASRDSGVEMAVGDSPLAALPGLSQDSLDFESSGSSEPPAQVGRLLASQKLGEVLER
Sbjct: 61 FLKLASRDSGVEMAVGDSPLAALPGLSQDSLDFESSGSSEPPAQVGRLLASQKLGEVLER 120
Query: 121 SRRLPTAPTSLSGQHRSLRLASKPEREVPLGAGQQESMEADTDLEAGLEEEAVGGLGPGA 180
SRRLPTAPTSLSGQHRSLRLASKPEREVPLGAGQQESMEADTDLEAGLEEEAVGGLGPGA
Sbjct: 121 SRRLPTAPTSLSGQHRSLRLASKPEREVPLGAGQQESMEADTDLEAGLEEEAVGGLGPGA 180
Query: 181 WACLPGQGLRYLEHLCLVLEQMARLQQLYLQLRIQRPPGDPGEEESTRAPLPSPLHTPGN 240
WACLPGQGLRYLEHLCLVLEQMARLQQLYLQLRIQRPPGDPGEEESTRAPLPSPLHTPGN
Sbjct: 181 WACLPGQGLRYLEHLCLVLEQMARLQQLYLQLRIQRPPGDPGEEESTRAPLPSPLHTPGN 240
Query: 241 RGQGPWELLSQTEHTGAKAASPPKVEVPSANPPRLPETPVEPTYHLPSSQGHKRDISHWD 300
RGQGPWELLSQTEHTGAKAASPPKVEVPSANPPRLPETPVEPTYHLPSSQGHKRDISHWD
Sbjct: 241 RGQGPWELLSQTEHTGAKAASPPKVEVPSANPPRLPETPVEPTYHLPSSQGHKRDISHWD 300
Query: 301 KVKVLLNRICRRSHHHPEPPAPPDGSDPRIESRDLPERPQCRPHRKTFMPSLVVKKQRAK 360
KVKVLLNRICRRSHHHPEPPAPPDGSDPRIESRDLPERPQCRPHRKTFMPSLVVKKQRAK
Sbjct: 301 KVKVLLNRICRRSHHHPEPPAPPDGSDPRIESRDLPERPQCRPHRKTFMPSLVVKKQRAK 360
Query: 361 NLSVG 365
NLSVG
Sbjct: 361 NLSVG 365
>gi|150418009 transforming, acidic coiled-coil containing protein 2
isoform a [Homo sapiens]
Length = 2948
Score = 42.0 bits (97), Expect = 9e-04
Identities = 59/217 (27%), Positives = 83/217 (38%), Gaps = 45/217 (20%)
Query: 125 PTAPTSLSGQHRSLRLASKPEREVPLGAGQQESMEADTDLEAGLEEEAVGGLGPGAWACL 184
P+ T H + LAS P ++P+ + S ++ +AG+ A A +
Sbjct: 407 PSLLTPTEEAHPASSLASFPAAQIPIAVEEPGSSSRESVSKAGMPVSA------DAAKEV 460
Query: 185 PGQGLRYLEHLCLVLEQMARLQQLYLQLRIQRPPGDPGEEESTRAPLPSPLHTPGNRGQG 244
GL LE Q L + + P GDPGE +P+P +P RG+
Sbjct: 461 VDAGLVGLER-----------QVSDLGSKGEHPEGDPGE-------VPAP--SPQERGE- 499
Query: 245 PWELLSQTEHTGAKAASPPKV------EV-PSANPPRLPETPVEPTYHLPS-SQGHKRDI 296
L ++ H PP + EV P A PP LP+ P E P + G K
Sbjct: 500 --HLNTEQSHEVQPGVPPPPLPKEQSHEVQPGAPPPPLPKAPSESARGPPGPTDGAK--- 554
Query: 297 SHWDKVKVLLNRICRRSHHHP-----EPPAPPDGSDP 328
H D + + RS E P PPDG DP
Sbjct: 555 VHEDSTSPAVAKEGSRSPGDSPGGKEEAPEPPDGGDP 591
>gi|239754368 PREDICTED: hypothetical protein [Homo sapiens]
Length = 336
Score = 38.5 bits (88), Expect = 0.010
Identities = 46/151 (30%), Positives = 55/151 (36%), Gaps = 25/151 (16%)
Query: 199 LEQMARLQQLYLQLRIQRPPGDPGEEESTRAPL-PSPLHTPGNRGQGPWELLSQTEHTGA 257
LE ++ +L L L I P G S AP P LH G R G H
Sbjct: 49 LEAVSAFHRLGLGLPIAGRP-KAGPSPSPAAPTRPRLLH--GRRSAG---------HVAR 96
Query: 258 KAASPPKVEVPSANPPRL--PETPVEPTYHLPSSQGHKRDISHWDKVKVLLNRICRRSHH 315
SPP VP+ PPR ETP L W +L+ R+ +
Sbjct: 97 ADVSPPAGPVPAPTPPRARNAETPWNAASLLNRG-------CCWGAAALLIGRLLGANQK 149
Query: 316 HPE-PPAPPDGSDPRIE--SRDLPERPQCRP 343
PP PP R+E SR LP R RP
Sbjct: 150 RQRMPPLPPSSPKARMERASRKLPSRVNSRP 180
>gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo
sapiens]
Length = 336
Score = 38.5 bits (88), Expect = 0.010
Identities = 46/151 (30%), Positives = 55/151 (36%), Gaps = 25/151 (16%)
Query: 199 LEQMARLQQLYLQLRIQRPPGDPGEEESTRAPL-PSPLHTPGNRGQGPWELLSQTEHTGA 257
LE ++ +L L L I P G S AP P LH G R G H
Sbjct: 49 LEAVSAFHRLGLGLPIAGRP-KAGPSPSPAAPTRPRLLH--GRRSAG---------HVAR 96
Query: 258 KAASPPKVEVPSANPPRL--PETPVEPTYHLPSSQGHKRDISHWDKVKVLLNRICRRSHH 315
SPP VP+ PPR ETP L W +L+ R+ +
Sbjct: 97 ADVSPPAGPVPAPTPPRARNAETPWNAASLLNRG-------CCWGAAALLIGRLLGANQK 149
Query: 316 HPE-PPAPPDGSDPRIE--SRDLPERPQCRP 343
PP PP R+E SR LP R RP
Sbjct: 150 RQRMPPLPPSSPKARMERASRKLPSRVNSRP 180
>gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo
sapiens]
Length = 321
Score = 38.5 bits (88), Expect = 0.010
Identities = 46/151 (30%), Positives = 55/151 (36%), Gaps = 25/151 (16%)
Query: 199 LEQMARLQQLYLQLRIQRPPGDPGEEESTRAPL-PSPLHTPGNRGQGPWELLSQTEHTGA 257
LE ++ +L L L I P G S AP P LH G R G H
Sbjct: 49 LEAVSAFHRLGLGLPIAGRP-KAGPSPSPAAPTRPRLLH--GRRSAG---------HVAR 96
Query: 258 KAASPPKVEVPSANPPRL--PETPVEPTYHLPSSQGHKRDISHWDKVKVLLNRICRRSHH 315
SPP VP+ PPR ETP L W +L+ R+ +
Sbjct: 97 ADVSPPAGPVPAPTPPRARNAETPWNAASLLNRG-------CCWGAAALLIGRLLGANQK 149
Query: 316 HPE-PPAPPDGSDPRIE--SRDLPERPQCRP 343
PP PP R+E SR LP R RP
Sbjct: 150 RQRMPPLPPSSPKARMERASRKLPSRVNSRP 180
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 38.1 bits (87), Expect = 0.012
Identities = 31/129 (24%), Positives = 45/129 (34%), Gaps = 15/129 (11%)
Query: 217 PPGDPGEEESTRAPLPSPLHTPGNRGQGPWELLSQTEHTG--AKAASPPKVEVPSANPPR 274
PP PG + P P P P + Q +H A PP +P+ PP+
Sbjct: 717 PPPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIHQVQHITQVAPPTPPPPPPIPAPLPPQ 776
Query: 275 LPETPVEPTYHLPSSQGHKRDISHWDKVKVLLNRICRRSHHHPEPPAPPDGSDPRIESRD 334
P P+ T P+S K + + + + P PP PP P +
Sbjct: 777 APPKPLV-TIPAPTS------------TKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASY 823
Query: 335 LPERPQCRP 343
+P P P
Sbjct: 824 IPPSPPTPP 832
>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
Length = 1170
Score = 36.6 bits (83), Expect = 0.036
Identities = 35/133 (26%), Positives = 41/133 (30%), Gaps = 31/133 (23%)
Query: 218 PGDPGEEESTRAPLPSPLHTPGNRGQGPWELLSQTEHTGAKAASPPKVEVPSANPPRLPE 277
PG P T+ L PLH P P Q + PP + P PP+
Sbjct: 565 PGQPFLPTHTQPNLQGPLHPPLPPPHQPQP--QQPQQQPPPQHQPPH-QPPHQPPPQHQP 621
Query: 278 TPVEPTYHLPSSQGHKRDISHWDKVKVLLNRICRRSHHHPEPPAPPDGSDPRIESRDLPE 337
P P H P Q H HHH PP P
Sbjct: 622 PPQHPPQHPPQHQHH---------------------HHHHHLSVPPPPLMPM-------S 653
Query: 338 RPQCRPHRKTFMP 350
+PQ RPH +T P
Sbjct: 654 QPQFRPHVQTAQP 666
>gi|27502386 nuclear factor of activated T-cells, cytosolic
component 1 isoform C [Homo sapiens]
Length = 930
Score = 36.2 bits (82), Expect = 0.047
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 221 PGEEESTRAPLPSPLHT-PGNRGQGPWELLSQTEHTGAKAASPPKVE---VPSANPPRLP 276
P E +P P+ T PG+ GQ P LL Q ++ PP +E PS+ P LP
Sbjct: 780 PAGEAPAVQDVPRPVATHPGSPGQPPPALLPQQVSAPPSSSCPPGLEHSLCPSSPSPPLP 839
Query: 277 ETPVEPTYHLPSS 289
EPT P S
Sbjct: 840 PATQEPTCLQPCS 852
>gi|95147559 ankyrin repeat domain 43 [Homo sapiens]
Length = 549
Score = 36.2 bits (82), Expect = 0.047
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 8/64 (12%)
Query: 217 PPGDPG----EEESTRAPLPSPLHTPGNRGQGP----WELLSQTEHTGAKAASPPKVEVP 268
PPGD G +++ P P PG R P EL TE A AA PP+
Sbjct: 131 PPGDLGLPTEPQDTPGGPASEPAQPPGERSADPPLPALELAQATERPSADAAPPPRAPSE 190
Query: 269 SANP 272
+A+P
Sbjct: 191 AASP 194
>gi|58082089 hypothetical protein LOC161394 [Homo sapiens]
Length = 674
Score = 36.2 bits (82), Expect = 0.047
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 84 PGLSQDSLDFESSGSS-EPPAQVGRLLASQKLGEVLERSRRLPTAPTSLSGQHRSLRLAS 142
PG+ ++SL + + EPP Q + S+KLGE LE + P T + R ++
Sbjct: 190 PGVPEESLRVQHEETGLEPPEQTKQDFPSEKLGESLEETDLQPPKMTKPETPEETQREST 249
Query: 143 KPEREVPLGAGQQESMEAD---TDLEAGLE 169
+ +R P + E +E + + EAGLE
Sbjct: 250 EKKRTEPPEQARLEFLEKEPRKSSEEAGLE 279
>gi|116812616 RecQ protein-like 4 [Homo sapiens]
Length = 1208
Score = 35.8 bits (81), Expect = 0.062
Identities = 27/93 (29%), Positives = 37/93 (39%), Gaps = 17/93 (18%)
Query: 215 QRPPGDPGEEESTRAPLPSPLHTPGNR---GQGPWELLSQTEHTGAKAASP--------- 262
Q P +E S R P P + G + + PWE +Q + ++A P
Sbjct: 235 QGPEASAFQEVSIRVGSPQPSSSGGEKRRWNEEPWESPAQVQQESSQAGPPSEGAGAVAV 294
Query: 263 ---PKVEVPSANPPRLPETPVEPTYH--LPSSQ 290
P E A PP+ +P P YH PSSQ
Sbjct: 295 EEDPPGEPVQAQPPQPCSSPSNPRYHGLSPSSQ 327
>gi|169167792 PREDICTED: similar to hCG1745223 [Homo sapiens]
Length = 320
Score = 35.0 bits (79), Expect = 0.11
Identities = 22/68 (32%), Positives = 26/68 (38%)
Query: 77 DSPLAALPGLSQDSLDFESSGSSEPPAQVGRLLASQKLGEVLERSRRLPTAPTSLSGQHR 136
+ PL G S + SGSSEPP Q G L+ + P PT Q R
Sbjct: 84 EKPLVPRRGASSPQIPLNISGSSEPPPQKGDAKLKGVRMSTLQTAETKPRTPTCPRRQRR 143
Query: 137 SLRLASKP 144
LR P
Sbjct: 144 WLRTTPHP 151
>gi|88987622 PREDICTED: similar to hCG1745223 [Homo sapiens]
Length = 320
Score = 35.0 bits (79), Expect = 0.11
Identities = 22/68 (32%), Positives = 26/68 (38%)
Query: 77 DSPLAALPGLSQDSLDFESSGSSEPPAQVGRLLASQKLGEVLERSRRLPTAPTSLSGQHR 136
+ PL G S + SGSSEPP Q G L+ + P PT Q R
Sbjct: 84 EKPLVPRRGASSPQIPLNISGSSEPPPQKGDAKLKGVRMSTLQTAETKPRTPTCPRRQRR 143
Query: 137 SLRLASKP 144
LR P
Sbjct: 144 WLRTTPHP 151
>gi|209977097 tripartite motif-containing 66 [Homo sapiens]
Length = 1216
Score = 35.0 bits (79), Expect = 0.11
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 7/113 (6%)
Query: 221 PGEEESTRAPLPSPLHTPGNRGQGPWELLSQTEHTGAKAASPPKVEVPSANPPRLPETPV 280
P E+E +P P L P Q P E S ++ G + S P VP + +
Sbjct: 368 PREKELACSPHPPKLLQPWLETQPPVEQESTSQRLGQQLTSQPVCIVPPQDVQQ--GAHA 425
Query: 281 EPTYHLPSSQ---GH--KRDISHWDKVKVLLNRICRRSHHHPEPPAPPDGSDP 328
+PT PS Q GH K +SH+ + HP PP PP P
Sbjct: 426 QPTLQTPSIQVQFGHHQKLKLSHFQQQPQQQLPPPPPPLPHPPPPLPPPPQQP 478
Score = 28.9 bits (63), Expect = 7.6
Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 8/100 (8%)
Query: 199 LEQMARLQQLYLQLRIQRPPGDPGEEESTRAPLPSPLHTPGNR---GQGPWELLSQTEHT 255
+EQ + Q+L QL Q P ++ A L TP + G LS +
Sbjct: 393 VEQESTSQRLGQQLTSQPVCIVPPQDVQQGAHAQPTLQTPSIQVQFGHHQKLKLSHFQQQ 452
Query: 256 GAKAASPPKVEVPSANPP-----RLPETPVEPTYHLPSSQ 290
+ PP +P PP + P P+ P+ HL SSQ
Sbjct: 453 PQQQLPPPPPPLPHPPPPLPPPPQQPHPPLPPSQHLASSQ 492
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 35.0 bits (79), Expect = 0.11
Identities = 37/138 (26%), Positives = 48/138 (34%), Gaps = 16/138 (11%)
Query: 219 GDPGEEESTRAPLPSPLHTPGNRGQGPW------ELLSQTEHTGAKAASPPKVEVPSANP 272
G G+ +RAP P P GP L + +E GA +PP+ VP+ P
Sbjct: 120 GKTGQGPGSRAPSP---RLPNKTISGPLIPPASPRLGNTSEAHGAARTAPPRPNVPAPPP 176
Query: 273 PRLPETPVEPTYHLPSSQGHKR-------DISHWDKVKVLLNRICRRSHHHPEPPAPPDG 325
P P P LPSS K ++ + V C P PP P
Sbjct: 177 PTPPPPPPPLPPPLPSSSPIKTPLVSPPGPLTKGNLPVVAPPVPCAPPPPPPPPPPTPPP 236
Query: 326 SDPRIESRDLPERPQCRP 343
P D +PQ P
Sbjct: 237 LPPASVLSDKAVKPQLAP 254
>gi|55741447 pleckstrin homology domain containing, family H (with
MyTH4 domain) member 1 [Homo sapiens]
Length = 1364
Score = 35.0 bits (79), Expect = 0.11
Identities = 34/117 (29%), Positives = 49/117 (41%), Gaps = 4/117 (3%)
Query: 63 KLASRDSGVEMAVGDSPLAALPGLSQDSLDFESSGSSEPPAQVGRLLASQKLGEVLERSR 122
K ++R+ G ++ P PG +DS+ S+P QVG + + E
Sbjct: 298 KTSAREGGPGSSL-TLPKVRAPGTPRDSIQLAKRHHSQP--QVGHGHFGRVVNIETEAFS 354
Query: 123 RL-PTAPTSLSGQHRSLRLASKPEREVPLGAGQQESMEADTDLEAGLEEEAVGGLGP 178
L P+ L + RS K E E P AG+ E E+ L A LEE +G P
Sbjct: 355 ALHPSGLPELESRARSREEPEKMEMEEPPPAGKNEERESPKALGAELEEVELGNKPP 411
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 35.0 bits (79), Expect = 0.11
Identities = 34/127 (26%), Positives = 42/127 (33%), Gaps = 21/127 (16%)
Query: 217 PPGDPGEEESTRAPLPSPLHTPGNRGQG-PWELLSQTEHTGAKAASPPKVEVPSANPPRL 275
P P S+ PSP P N G G P S G SPP V S
Sbjct: 932 PYSTPPVPSSSGRLTPSPRGGPFNPGSGGPLPASSPASFDGP---SPPDTRVGSREKSLY 988
Query: 276 PETPVEPTYHLPSSQGHKRDISHWDKVKVLLNRICRRSHHHPEPPAPPDGSDPRIESRDL 335
P+ P +H P H + HHH PP PP+ +E+
Sbjct: 989 HSGPLPPAHHHPPHHHHHHAPPP------------QPHHHHAHPPHPPE-----METGGS 1031
Query: 336 PERPQCR 342
P+ P R
Sbjct: 1032 PDDPPPR 1038
>gi|157412263 cyclin M1 [Homo sapiens]
Length = 951
Score = 34.7 bits (78), Expect = 0.14
Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 6/68 (8%)
Query: 212 LRIQRPPGDPGEEESTRAPLPSPLHTPGNRGQGPW--ELLSQTEHTGAKAASPPKVEVPS 269
LR+ PG P +T AP+PSP G G G W L+ E G +P V
Sbjct: 72 LRVYFQPGPP----ATAAPVPSPTLNSGENGTGDWAPRLVFIEEPPGGGGVAPSAVPTRP 127
Query: 270 ANPPRLPE 277
P R E
Sbjct: 128 PGPQRCRE 135
>gi|169174618 PREDICTED: family with sequence similarity 75, member
A4 isoform 2 [Homo sapiens]
Length = 1272
Score = 34.3 bits (77), Expect = 0.18
Identities = 39/135 (28%), Positives = 53/135 (39%), Gaps = 33/135 (24%)
Query: 190 RYLEHLCLVLEQMARLQQLYL------QLRIQRPPGDPGEEE------------STRAPL 231
R LE +L Q+ L +L QL PPG+ GE AP+
Sbjct: 14 RGLEETSDLLSQLQSLLGPHLDKGDFGQLSGPDPPGEVGERAPDGASQSSHEPMEDAAPI 73
Query: 232 PSPLHTPGNRGQGPWELLS-------QTEHTGAKAASPPK----VEVPSANPPRL----P 276
SPL +P + + P +L S T + A+ PP+ +E PS PP L P
Sbjct: 74 LSPLASPDPQAKHPQDLASTPSPGPMTTSVSSLSASQPPEPSLPLEHPSPEPPALFPHPP 133
Query: 277 ETPVEPTYHLPSSQG 291
TP LP +G
Sbjct: 134 HTPDPLACSLPPPKG 148
>gi|239743732 PREDICTED: family with sequence similarity 75, member
A4 isoform 1 [Homo sapiens]
Length = 1361
Score = 34.3 bits (77), Expect = 0.18
Identities = 39/135 (28%), Positives = 53/135 (39%), Gaps = 33/135 (24%)
Query: 190 RYLEHLCLVLEQMARLQQLYL------QLRIQRPPGDPGEEE------------STRAPL 231
R LE +L Q+ L +L QL PPG+ GE AP+
Sbjct: 103 RGLEETSDLLSQLQSLLGPHLDKGDFGQLSGPDPPGEVGERAPDGASQSSHEPMEDAAPI 162
Query: 232 PSPLHTPGNRGQGPWELLS-------QTEHTGAKAASPPK----VEVPSANPPRL----P 276
SPL +P + + P +L S T + A+ PP+ +E PS PP L P
Sbjct: 163 LSPLASPDPQAKHPQDLASTPSPGPMTTSVSSLSASQPPEPSLPLEHPSPEPPALFPHPP 222
Query: 277 ETPVEPTYHLPSSQG 291
TP LP +G
Sbjct: 223 HTPDPLACSLPPPKG 237
>gi|153791826 hypothetical protein LOC26165 [Homo sapiens]
Length = 1347
Score = 34.3 bits (77), Expect = 0.18
Identities = 39/135 (28%), Positives = 53/135 (39%), Gaps = 33/135 (24%)
Query: 190 RYLEHLCLVLEQMARLQQLYL------QLRIQRPPGDPGEEE------------STRAPL 231
R LE +L Q+ L +L QL PPG+ GE AP+
Sbjct: 89 RGLEETSDLLSQLQSLLGPHLDKGDFGQLSGPDPPGEVGERAPDGASQSSHEPMEDAAPI 148
Query: 232 PSPLHTPGNRGQGPWELLS-------QTEHTGAKAASPPK----VEVPSANPPRL----P 276
SPL +P + + P +L S T + A+ PP+ +E PS PP L P
Sbjct: 149 LSPLASPDPQAKHPQDLASTPSPGPMTTSVSSLSASQPPEPSLPLEHPSPEPPALFPHPP 208
Query: 277 ETPVEPTYHLPSSQG 291
TP LP +G
Sbjct: 209 HTPDPLACSLPPPKG 223
>gi|165377334 hypothetical protein LOC727905 [Homo sapiens]
Length = 1347
Score = 34.3 bits (77), Expect = 0.18
Identities = 39/135 (28%), Positives = 53/135 (39%), Gaps = 33/135 (24%)
Query: 190 RYLEHLCLVLEQMARLQQLYL------QLRIQRPPGDPGEEE------------STRAPL 231
R LE +L Q+ L +L QL PPG+ GE AP+
Sbjct: 89 RGLEETSDLLSQLQSLLGPHLDKGDFGQLSGPDPPGEVGERAPDGASQSSHEPMEDAAPI 148
Query: 232 PSPLHTPGNRGQGPWELLS-------QTEHTGAKAASPPK----VEVPSANPPRL----P 276
SPL +P + + P +L S T + A+ PP+ +E PS PP L P
Sbjct: 149 LSPLASPDPQAKHPQDLASTPSPGPMTTSVSSLSASQPPEPSLPLEHPSPEPPALFPHPP 208
Query: 277 ETPVEPTYHLPSSQG 291
TP LP +G
Sbjct: 209 HTPDPLACSLPPPKG 223
>gi|4557317 annexin A11 [Homo sapiens]
Length = 505
Score = 33.9 bits (76), Expect = 0.24
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Query: 217 PPGDPGEEESTRAPLPSPLHTPGNRGQGPWELLSQTEHTGA----KAASPPKVEVPSANP 272
PPG G+ S + P+P P G P + S + GA + PP + P A P
Sbjct: 86 PPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRMPSYPPYPGAPVPGQPMPPPGQQPPGAYP 145
Query: 273 PRLPET-PVEPTYHLPSSQ 290
+ P T P +P LP Q
Sbjct: 146 GQPPVTYPGQPPVPLPGQQ 164
>gi|22165433 annexin A11 [Homo sapiens]
Length = 505
Score = 33.9 bits (76), Expect = 0.24
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Query: 217 PPGDPGEEESTRAPLPSPLHTPGNRGQGPWELLSQTEHTGA----KAASPPKVEVPSANP 272
PPG G+ S + P+P P G P + S + GA + PP + P A P
Sbjct: 86 PPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRMPSYPPYPGAPVPGQPMPPPGQQPPGAYP 145
Query: 273 PRLPET-PVEPTYHLPSSQ 290
+ P T P +P LP Q
Sbjct: 146 GQPPVTYPGQPPVPLPGQQ 164
>gi|22165431 annexin A11 [Homo sapiens]
Length = 505
Score = 33.9 bits (76), Expect = 0.24
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Query: 217 PPGDPGEEESTRAPLPSPLHTPGNRGQGPWELLSQTEHTGA----KAASPPKVEVPSANP 272
PPG G+ S + P+P P G P + S + GA + PP + P A P
Sbjct: 86 PPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRMPSYPPYPGAPVPGQPMPPPGQQPPGAYP 145
Query: 273 PRLPET-PVEPTYHLPSSQ 290
+ P T P +P LP Q
Sbjct: 146 GQPPVTYPGQPPVPLPGQQ 164
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 33.9 bits (76), Expect = 0.24
Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 215 QRPPGDPGEEESTRAPLP-SPLHTPGNRGQGPWELLSQTEHTGAKAASPPKVEVPSANPP 273
Q GD G E+++ P P SP H+P + G P +++ TG P+ +V S PP
Sbjct: 619 QLSQGD-GRSETSQPPTPGSPSHSPLHSGPRPRR--RESDPTG------PQRQVFSVAPP 669
Query: 274 -RLPETPVEPTYHLPSSQGHKRDISHWDKVKVLLNRICRRSHHH-----PEPPAPP 323
+ P LP Q KRD+S + + LLNR+ R H P+ P P
Sbjct: 670 FEVNGLPRAVPLSLPY-QDFKRDLSDYRERARLLNRVRRVGFSHMLLTTPQVPLAP 724
>gi|46094081 development and differentiation enhancing factor 1
[Homo sapiens]
Length = 1129
Score = 33.9 bits (76), Expect = 0.24
Identities = 42/151 (27%), Positives = 54/151 (35%), Gaps = 42/151 (27%)
Query: 215 QRPPGDPGEEESTRAPLPSPL-HTPGNRGQGPW----------------ELLSQTEHT-G 256
+RPP P + T + PSPL H P N+G PW E LSQ T
Sbjct: 825 KRPPPPPPGHKRTLSDPPSPLPHGPPNKGAVPWGNDGGPSSSSKTTNKFEGLSQQSSTSS 884
Query: 257 AKAASPPKVEVPSANPPRLPETPVEPTYHLPSSQGHKRDISHWDKVKVLLNRICRRSHHH 316
AK A P+V LP+ P + K D DK + + S
Sbjct: 885 AKTALGPRV---------LPKLPQKVAL-------RKTDHLSLDKATIPPEIFQKSSQLA 928
Query: 317 PEPPAPPDGS--------DPRIESRDLPERP 339
P PP G P+ + DLP +P
Sbjct: 929 ELPQKPPPGDLPPKPTELAPKPQIGDLPPKP 959
>gi|118918423 hypothetical protein LOC286207 [Homo sapiens]
Length = 520
Score = 33.9 bits (76), Expect = 0.24
Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 24/102 (23%)
Query: 254 HTGAKAASPPKVEVPSANPPR----LPE----TPVEP--------TYHLPSSQGHKRDIS 297
H +++ PPK PS PR LP+ TP +P H+P + R +S
Sbjct: 423 HQESQSHGPPKESRPSIQLPRTGSLLPQLSDITPYQPGDLGLVPRQVHIPPNPQDLRLLS 482
Query: 298 HWDKVKVLLNRICRRSHHHPEPPAPPDGSDPRIESRDLPERP 339
+ +V R+H PE AP GS R+E LPE P
Sbjct: 483 YITRVGTF------RAHSSPEMRAP--GSLKRLEKFSLPEVP 516
>gi|157743257 POU domain, class 6, transcription factor 2 [Homo
sapiens]
Length = 691
Score = 33.9 bits (76), Expect = 0.24
Identities = 34/134 (25%), Positives = 54/134 (40%), Gaps = 19/134 (14%)
Query: 162 TDLEAGLEEEAVGGLGPGAWACLPGQGLRYLEHLCLVLEQMARLQQLYLQLRIQRPPGDP 221
T+++ + A GG+ LP Q L+ L ++LQQL LQL+ Q
Sbjct: 147 TNIQGLVAAAAAGGI-----MTLPLQNLQATSSL------NSQLQQLQLQLQQQ------ 189
Query: 222 GEEESTRAPLPSPLHTPGNRGQGPWELLSQTEHTGAKAASPPKVEVPSANPPRLPETPVE 281
+++ + P PS P Q P + Q PP + P A +L + P +
Sbjct: 190 -QQQQQQQPPPSTNQHPQPAPQAPSQSQQQPLQPTPPQQPPPASQQPPAPTSQLQQAP-Q 247
Query: 282 PTYHLPSSQGHKRD 295
P H P S ++
Sbjct: 248 PQQHQPHSHSQNQN 261
>gi|239755981 PREDICTED: hypothetical protein XP_002344766 [Homo
sapiens]
Length = 307
Score = 33.5 bits (75), Expect = 0.31
Identities = 26/93 (27%), Positives = 32/93 (34%), Gaps = 18/93 (19%)
Query: 232 PSPLHTPGNRGQGPWELLSQTEH-TGAKAASPPKVEVPSANPPRLPETPVEPTYHLPSSQ 290
P+P HTP R LS T H T +SPP + + PP P T L
Sbjct: 18 PAPFHTPRKRHP-----LSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGS 72
Query: 291 GHKRDISHWDKVKVLLNRICRRSHHHPEPPAPP 323
G + RR+ P P PP
Sbjct: 73 GEGKQEEG------------RRAQARPRPLRPP 93
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.134 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,401,763
Number of Sequences: 37866
Number of extensions: 1082768
Number of successful extensions: 4879
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 253
Number of HSP's that attempted gapping in prelim test: 4533
Number of HSP's gapped (non-prelim): 617
length of query: 365
length of database: 18,247,518
effective HSP length: 104
effective length of query: 261
effective length of database: 14,309,454
effective search space: 3734767494
effective search space used: 3734767494
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.