Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 62122851
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|62122851 small proline-rich protein 2G [Homo sapiens]
(73 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|62122851 small proline-rich protein 2G [Homo sapiens] 187 2e-48
gi|83582817 small proline-rich protein 2E [Homo sapiens] 145 7e-36
gi|5174693 small proline-rich protein 2A [Homo sapiens] 145 9e-36
gi|62955831 small proline-rich protein 2B [Homo sapiens] 144 1e-35
gi|62945419 small proline-rich protein 2F [Homo sapiens] 140 2e-34
gi|56699492 small proline-rich protein 2D [Homo sapiens] 138 1e-33
gi|45827734 small proline-rich protein 1A [Homo sapiens] 63 4e-11
gi|83582815 small proline-rich protein 1B [Homo sapiens] 62 7e-11
gi|239752912 PREDICTED: hypothetical protein [Homo sapiens] 61 2e-10
gi|30387654 late cornified envelope 1A [Homo sapiens] 61 2e-10
gi|30387646 late cornified envelope 1F [Homo sapiens] 61 2e-10
gi|30387650 late cornified envelope 1E [Homo sapiens] 61 2e-10
gi|30387652 late cornified envelope 1C [Homo sapiens] 61 2e-10
gi|30410035 late cornified envelope 5A [Homo sapiens] 60 5e-10
gi|30410043 late cornified envelope 2D [Homo sapiens] 57 3e-09
gi|58082087 late cornified envelope-like proline-rich 1 [Homo sa... 57 4e-09
gi|30410047 late cornified envelope 2C [Homo sapiens] 56 7e-09
gi|30410045 late cornified envelope 2A [Homo sapiens] 55 2e-08
gi|27436869 small proline-rich protein 4 [Homo sapiens] 55 2e-08
gi|153792074 proline rich 12 [Homo sapiens] 55 2e-08
gi|30387656 late cornified envelope 1B [Homo sapiens] 53 4e-08
gi|7657685 late cornified envelope 2B [Homo sapiens] 52 1e-07
gi|30387648 late cornified envelope 1D [Homo sapiens] 52 1e-07
gi|119120861 formin-like 3 isoform 2 [Homo sapiens] 52 1e-07
gi|119120874 formin-like 3 isoform 1 [Homo sapiens] 52 1e-07
gi|90903231 huntingtin [Homo sapiens] 50 3e-07
gi|33356148 formin-like 1 [Homo sapiens] 50 3e-07
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 50 4e-07
gi|146134388 YLP motif containing 1 [Homo sapiens] 49 8e-07
gi|30410037 late cornified envelope 3C [Homo sapiens] 49 1e-06
>gi|62122851 small proline-rich protein 2G [Homo sapiens]
Length = 73
Score = 187 bits (474), Expect = 2e-48
Identities = 73/73 (100%), Positives = 73/73 (100%)
Query: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPYLPPPCPPEHCPPPPCQDKCPPVQP 60
MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPYLPPPCPPEHCPPPPCQDKCPPVQP
Sbjct: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPYLPPPCPPEHCPPPPCQDKCPPVQP 60
Query: 61 YPPCQQKYPPKSK 73
YPPCQQKYPPKSK
Sbjct: 61 YPPCQQKYPPKSK 73
>gi|83582817 small proline-rich protein 2E [Homo sapiens]
Length = 72
Score = 145 bits (366), Expect = 7e-36
Identities = 60/73 (82%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Query: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPYLPPPCPPEHCPPPPCQDKCPPVQP 60
MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEP PP C P+ CPP CQ KCPPV P
Sbjct: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPCPPPKC-PQPCPPQQCQQKCPPVTP 59
Query: 61 YPPCQQKYPPKSK 73
PPCQ K PPKSK
Sbjct: 60 SPPCQPKCPPKSK 72
>gi|5174693 small proline-rich protein 2A [Homo sapiens]
Length = 72
Score = 145 bits (365), Expect = 9e-36
Identities = 60/73 (82%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Query: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPYLPPPCPPEHCPPPPCQDKCPPVQP 60
MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEP PP C P+ CPP CQ K PPV P
Sbjct: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPCPPPKC-PQPCPPQQCQQKYPPVTP 59
Query: 61 YPPCQQKYPPKSK 73
PPCQ KYPPKSK
Sbjct: 60 SPPCQSKYPPKSK 72
>gi|62955831 small proline-rich protein 2B [Homo sapiens]
Length = 72
Score = 144 bits (364), Expect = 1e-35
Identities = 60/73 (82%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Query: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPYLPPPCPPEHCPPPPCQDKCPPVQP 60
MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEP PP C P+ CPP CQ K PPV P
Sbjct: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPCPPPKC-PQPCPPQQCQQKYPPVTP 59
Query: 61 YPPCQQKYPPKSK 73
PPCQ KYPPKSK
Sbjct: 60 SPPCQPKYPPKSK 72
>gi|62945419 small proline-rich protein 2F [Homo sapiens]
Length = 72
Score = 140 bits (354), Expect = 2e-34
Identities = 58/73 (79%), Positives = 59/73 (80%), Gaps = 1/73 (1%)
Query: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPYLPPPCPPEHCPPPPCQDKCPPVQP 60
MSYQQQQCKQPCQPPPVCP PKCPEPCPPPKCPEP P C P+ CPP CQ KCPPV P
Sbjct: 1 MSYQQQQCKQPCQPPPVCPAPKCPEPCPPPKCPEPCPPSKC-PQSCPPQQCQQKCPPVTP 59
Query: 61 YPPCQQKYPPKSK 73
PPCQ K PPKSK
Sbjct: 60 SPPCQPKCPPKSK 72
>gi|56699492 small proline-rich protein 2D [Homo sapiens]
Length = 72
Score = 138 bits (347), Expect = 1e-33
Identities = 58/73 (79%), Positives = 59/73 (80%), Gaps = 1/73 (1%)
Query: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPYLPPPCPPEHCPPPPCQDKCPPVQP 60
MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEP P C P+ CPP CQ K PPV P
Sbjct: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPCPSPKC-PQPCPPQQCQQKYPPVTP 59
Query: 61 YPPCQQKYPPKSK 73
PPCQ K PPKSK
Sbjct: 60 SPPCQPKCPPKSK 72
>gi|45827734 small proline-rich protein 1A [Homo sapiens]
Length = 89
Score = 63.2 bits (152), Expect = 4e-11
Identities = 39/76 (51%), Positives = 41/76 (53%), Gaps = 11/76 (14%)
Query: 4 QQQQCKQPCQPPPVCP-TPKCPEPCPPPKCPE---PYLPPPCPPEHCPPPPCQDK----C 55
QQQQ KQPCQPPP P PK EPC PK PE P +P PC P+ P PCQ K C
Sbjct: 17 QQQQVKQPCQPPPQEPCIPKTKEPC-HPKVPEPCHPKVPEPCQPK--VPEPCQPKVPEPC 73
Query: 56 PPVQPYPPCQQKYPPK 71
P P QQK K
Sbjct: 74 PSTVTPAPAQQKTKQK 89
Score = 52.8 bits (125), Expect = 6e-08
Identities = 32/70 (45%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 6 QQCKQPCQPPPVCPTPKCPEPCPPPKCPEPYLPP---PCPPEHCPPPPCQDKCP-PVQPY 61
QQ KQPC PPP + +PC PP EP +P PC P+ P PC K P P QP
Sbjct: 4 QQQKQPCTPPPQPQQQQVKQPCQPPP-QEPCIPKTKEPCHPK--VPEPCHPKVPEPCQPK 60
Query: 62 --PPCQQKYP 69
PCQ K P
Sbjct: 61 VPEPCQPKVP 70
>gi|83582815 small proline-rich protein 1B [Homo sapiens]
Length = 89
Score = 62.4 bits (150), Expect = 7e-11
Identities = 38/76 (50%), Positives = 41/76 (53%), Gaps = 11/76 (14%)
Query: 4 QQQQCKQPCQPPPVCPT-PKCPEPCPPPKCPE---PYLPPPCPPEHCPPPPCQDK----C 55
QQQQ KQPCQPPP P PK EPC PK PE P +P PC P+ P PC K C
Sbjct: 17 QQQQVKQPCQPPPQEPCIPKTKEPC-HPKVPEPCHPKVPEPCQPK--VPEPCHPKVPEPC 73
Query: 56 PPVQPYPPCQQKYPPK 71
P + P QQK K
Sbjct: 74 PSIVTPAPAQQKTKQK 89
Score = 52.4 bits (124), Expect = 8e-08
Identities = 33/79 (41%), Positives = 38/79 (48%), Gaps = 19/79 (24%)
Query: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPC-PPPKCP---------EPYLPPPCPPEHCPPPP 50
MS QQQ KQPC PPP + +PC PPP+ P P +P PC P+ P P
Sbjct: 1 MSSQQQ--KQPCTPPPQLQQQQVKQPCQPPPQEPCIPKTKEPCHPKVPEPCHPK--VPEP 56
Query: 51 CQDKCPPVQPYPPCQQKYP 69
CQ K P PC K P
Sbjct: 57 CQPKVP-----EPCHPKVP 70
>gi|239752912 PREDICTED: hypothetical protein [Homo sapiens]
Length = 118
Score = 60.8 bits (146), Expect = 2e-10
Identities = 26/38 (68%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Query: 6 QQCKQPCQPPPVCPTPKCPEPCPPPKCPEPYLPPPCPP 43
QQ +Q CQPPP C TPKCP CP PKCP P PP CPP
Sbjct: 4 QQSQQQCQPPPKC-TPKCPPKCPTPKCP-PKCPPKCPP 39
Score = 39.3 bits (90), Expect = 7e-04
Identities = 15/25 (60%), Positives = 15/25 (60%)
Query: 47 PPPPCQDKCPPVQPYPPCQQKYPPK 71
PPP C KCPP P P C K PPK
Sbjct: 12 PPPKCTPKCPPKCPTPKCPPKCPPK 36
>gi|30387654 late cornified envelope 1A [Homo sapiens]
Length = 110
Score = 60.8 bits (146), Expect = 2e-10
Identities = 26/38 (68%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Query: 6 QQCKQPCQPPPVCPTPKCPEPCPPPKCPEPYLPPPCPP 43
QQ +Q CQPPP C TPKCP CP PKCP P PP CPP
Sbjct: 4 QQSQQQCQPPPKC-TPKCPPKCPTPKCP-PKCPPKCPP 39
Score = 39.3 bits (90), Expect = 7e-04
Identities = 15/25 (60%), Positives = 15/25 (60%)
Query: 47 PPPPCQDKCPPVQPYPPCQQKYPPK 71
PPP C KCPP P P C K PPK
Sbjct: 12 PPPKCTPKCPPKCPTPKCPPKCPPK 36
>gi|30387646 late cornified envelope 1F [Homo sapiens]
Length = 118
Score = 60.8 bits (146), Expect = 2e-10
Identities = 26/38 (68%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Query: 6 QQCKQPCQPPPVCPTPKCPEPCPPPKCPEPYLPPPCPP 43
QQ +Q CQPPP C TPKCP CP PKCP P PP CPP
Sbjct: 4 QQSQQQCQPPPKC-TPKCPPKCPTPKCP-PKCPPKCPP 39
Score = 39.3 bits (90), Expect = 7e-04
Identities = 15/25 (60%), Positives = 15/25 (60%)
Query: 47 PPPPCQDKCPPVQPYPPCQQKYPPK 71
PPP C KCPP P P C K PPK
Sbjct: 12 PPPKCTPKCPPKCPTPKCPPKCPPK 36
>gi|30387650 late cornified envelope 1E [Homo sapiens]
Length = 118
Score = 60.8 bits (146), Expect = 2e-10
Identities = 26/38 (68%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Query: 6 QQCKQPCQPPPVCPTPKCPEPCPPPKCPEPYLPPPCPP 43
QQ +Q CQPPP C TPKCP CP PKCP P PP CPP
Sbjct: 4 QQSQQQCQPPPKC-TPKCPPKCPTPKCP-PKCPPKCPP 39
Score = 39.3 bits (90), Expect = 7e-04
Identities = 15/25 (60%), Positives = 15/25 (60%)
Query: 47 PPPPCQDKCPPVQPYPPCQQKYPPK 71
PPP C KCPP P P C K PPK
Sbjct: 12 PPPKCTPKCPPKCPTPKCPPKCPPK 36
>gi|30387652 late cornified envelope 1C [Homo sapiens]
Length = 118
Score = 60.8 bits (146), Expect = 2e-10
Identities = 26/38 (68%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Query: 6 QQCKQPCQPPPVCPTPKCPEPCPPPKCPEPYLPPPCPP 43
QQ +Q CQPPP C TPKCP CP PKCP P PP CPP
Sbjct: 4 QQSQQQCQPPPKC-TPKCPPKCPTPKCP-PKCPPKCPP 39
Score = 39.3 bits (90), Expect = 7e-04
Identities = 15/25 (60%), Positives = 15/25 (60%)
Query: 47 PPPPCQDKCPPVQPYPPCQQKYPPK 71
PPP C KCPP P P C K PPK
Sbjct: 12 PPPKCTPKCPPKCPTPKCPPKCPPK 36
>gi|30410035 late cornified envelope 5A [Homo sapiens]
Length = 118
Score = 59.7 bits (143), Expect = 5e-10
Identities = 29/47 (61%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 6 QQCKQPCQPPPVCPTPKCPEPCPPPKCPEPYLPPPCPPE---HCPPP 49
QQ +Q CQPPP C TPKCP C PKCP P PP CPP+ CPPP
Sbjct: 4 QQSQQQCQPPPKC-TPKCPPKC-TPKCP-PKCPPKCPPQCSAPCPPP 47
>gi|30410043 late cornified envelope 2D [Homo sapiens]
Length = 110
Score = 57.0 bits (136), Expect = 3e-09
Identities = 33/62 (53%), Positives = 33/62 (53%), Gaps = 9/62 (14%)
Query: 1 MSYQQQQCKQPCQPPPVCP---TPKCPEPCPPPKCPEPYLPPPCPP--EHCPPPPCQDKC 55
MS QQ Q Q CQPPP CP TPKCP C PPKCP P P PC P C P C
Sbjct: 1 MSCQQNQ--QQCQPPPKCPPKCTPKCPPKC-PPKCP-PQCPAPCSPAVSSCCGPSSGSCC 56
Query: 56 PP 57
P
Sbjct: 57 GP 58
Score = 26.6 bits (57), Expect = 4.5
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 8/28 (28%)
Query: 44 EHCPPPPCQDKCPPVQPYPPCQQKYPPK 71
+ C PPP KCPP C K PPK
Sbjct: 8 QQCQPPP---KCPP-----KCTPKCPPK 27
>gi|58082087 late cornified envelope-like proline-rich 1 [Homo
sapiens]
Length = 98
Score = 56.6 bits (135), Expect = 4e-09
Identities = 29/70 (41%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 5 QQQCKQPCQPPPVCPT-PKCPEPCPPPKCPEPYLPPPCP---PEHCPPPPCQDKCPPVQP 60
+Q+C+ CQP + +C E CP KCP P PCP P CPP PC CPP P
Sbjct: 24 EQKCESKCQPSCLKKLLQRCFEKCPWEKCPAPPKCLPCPSQSPSSCPPQPCTKPCPPKCP 83
Query: 61 YPPCQQKYPP 70
C PP
Sbjct: 84 -SSCPHACPP 92
Score = 45.1 bits (105), Expect = 1e-05
Identities = 21/39 (53%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 11 PCQPPPVCPTPKCPEPCPPPKCPEPYLPPPCPPEHCPPP 49
P Q P CP C +PCPP KCP P CPP CPPP
Sbjct: 62 PSQSPSSCPPQPCTKPCPP-KCPSS-CPHACPPP-CPPP 97
Score = 36.2 bits (82), Expect = 0.006
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 5/29 (17%)
Query: 6 QQCKQPCQPPPVCPTP---KCPEPCPPPK 31
Q C +PC PP CP+ CP PCPPP+
Sbjct: 72 QPCTKPC--PPKCPSSCPHACPPPCPPPE 98
Score = 35.8 bits (81), Expect = 0.007
Identities = 17/29 (58%), Positives = 17/29 (58%), Gaps = 6/29 (20%)
Query: 10 QPCQPPPVCPTPKCPEPCP---PPKCPEP 35
QPC P CP PKCP CP PP CP P
Sbjct: 72 QPCTKP--CP-PKCPSSCPHACPPPCPPP 97
>gi|30410047 late cornified envelope 2C [Homo sapiens]
Length = 110
Score = 55.8 bits (133), Expect = 7e-09
Identities = 33/62 (53%), Positives = 33/62 (53%), Gaps = 9/62 (14%)
Query: 1 MSYQQQQCKQPCQPPPVCP---TPKCPEPCPPPKCPEPYLPPPCPP--EHCPPPPCQDKC 55
MS QQ Q Q CQPPP CP TPKCP C PPKCP P P PC P C P C
Sbjct: 1 MSCQQNQ--QQCQPPPKCPPKCTPKCPPKC-PPKCP-PQCPAPCFPAVSSCCGPSSGSCC 56
Query: 56 PP 57
P
Sbjct: 57 GP 58
Score = 26.6 bits (57), Expect = 4.5
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 8/28 (28%)
Query: 44 EHCPPPPCQDKCPPVQPYPPCQQKYPPK 71
+ C PPP KCPP C K PPK
Sbjct: 8 QQCQPPP---KCPP-----KCTPKCPPK 27
>gi|30410045 late cornified envelope 2A [Homo sapiens]
Length = 106
Score = 54.7 bits (130), Expect = 2e-08
Identities = 28/43 (65%), Positives = 28/43 (65%), Gaps = 5/43 (11%)
Query: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPYLPPPCPP 43
MS QQ Q Q CQPPP CP PKCP C PPKC P P PCPP
Sbjct: 1 MSCQQNQ--QQCQPPPKCP-PKCPPKC-PPKC-RPQCPAPCPP 38
Score = 32.3 bits (72), Expect = 0.082
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Query: 38 PPPCPPEHCP---PPPCQDKCPPVQPYPPCQQKYPPKS 72
PP CPP+ CP PP C+ +CP P PP P S
Sbjct: 13 PPKCPPK-CPPKCPPKCRPQCPAPCP-PPVSSCCGPSS 48
Score = 30.0 bits (66), Expect = 0.41
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Query: 47 PPPPCQDKCPPVQPYPPCQQKYP 69
PPP C KCPP P P C+ + P
Sbjct: 12 PPPKCPPKCPPKCP-PKCRPQCP 33
>gi|27436869 small proline-rich protein 4 [Homo sapiens]
Length = 79
Score = 54.7 bits (130), Expect = 2e-08
Identities = 32/71 (45%), Positives = 34/71 (47%), Gaps = 17/71 (23%)
Query: 4 QQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPYLPPPCPPE---HCPPP----PCQDKCP 56
QQQQ KQPCQPPPV KC E C P PC P+ CPP P Q KCP
Sbjct: 19 QQQQVKQPCQPPPV----KCQETCAPK------TKDPCAPQVKKQCPPKGTIIPAQQKCP 68
Query: 57 PVQPYPPCQQK 67
Q +QK
Sbjct: 69 SAQQASKSKQK 79
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 54.7 bits (130), Expect = 2e-08
Identities = 27/60 (45%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 9 KQPCQPPPVCPTPKCPEPCPPPKCPEPYLPPPCP-----PEHCPPPPCQDKCPPVQPYPP 63
++P PP PTP+ P+P PPP P+P LP P P P PPPP PP P PP
Sbjct: 1455 EKPPPTPPPAPTPQ-PQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPP 1513
Score = 50.4 bits (119), Expect = 3e-07
Identities = 30/75 (40%), Positives = 34/75 (45%), Gaps = 14/75 (18%)
Query: 9 KQPCQPPPVCPTPKCPEPCPPPKCPEPYLP------------PPCPPEHCPPPPCQDKCP 56
K P PPP PTP+ P+P PPP P+P LP PP PP PPPP P
Sbjct: 1456 KPPPTPPPA-PTPQ-PQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPP 1513
Query: 57 PVQPYPPCQQKYPPK 71
P P PP+
Sbjct: 1514 PPPPPAAAPLAAPPE 1528
Score = 42.4 bits (98), Expect = 8e-05
Identities = 23/54 (42%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 11 PCQPPPVCPTPKCPEPCPPPKCPEPYLP-PPCPPEHCPPPPCQDKCPPVQPYPP 63
P PP V PTP P P P P P P +P PP PP P PP +P P
Sbjct: 1483 PSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLA---APPEEPAAP 1533
Score = 35.8 bits (81), Expect = 0.007
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 14 PPPVCPTPKCPEPCPPPKCPEPYLPPPCPPEH-CPPPPCQDKCPPVQP 60
PPP+ P P P PPP P P PPE P P + P +P
Sbjct: 1498 PPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAAPSPEDPELPDTRP 1545
Score = 35.0 bits (79), Expect = 0.013
Identities = 25/68 (36%), Positives = 27/68 (39%), Gaps = 15/68 (22%)
Query: 15 PPVCPTPKCPEPCPPPKCP--------EPYL----PPPCPPEHCPPPPCQDKCPPVQPYP 62
PP+ P P P P P P EP L PPP PP P P Q + PP P P
Sbjct: 1422 PPLAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPP---PAPTPQPQPPPPPPPP 1478
Query: 63 PCQQKYPP 70
PP
Sbjct: 1479 QPALPSPP 1486
Score = 34.7 bits (78), Expect = 0.016
Identities = 23/61 (37%), Positives = 23/61 (37%), Gaps = 11/61 (18%)
Query: 19 PTPKCPEPCPPPKCPEPYLPPPCPPEHCPPPPCQDKCP---------PVQPYPPCQQKYP 69
P P E PPP P P P PP PPPP Q P P P PP P
Sbjct: 1448 PEPPLLEEKPPPTPPPAPTPQPQPPP--PPPPPQPALPSPPPLVAPTPSSPPPPPLPPPP 1505
Query: 70 P 70
P
Sbjct: 1506 P 1506
Score = 32.0 bits (71), Expect = 0.11
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 19 PTPKCPEPCPPPKCPEPYL---PPPCPPEHC-PPPPCQDKCPPVQPYPPCQQK 67
P PK P P P P+ PE PP PE P PP +K ++P ++K
Sbjct: 1692 PPPKAPAPPPKPETPEKTTSEKPPEQTPETAMPEPPAPEKPSLLRPVEKEKEK 1744
Score = 29.3 bits (64), Expect = 0.69
Identities = 19/74 (25%), Positives = 25/74 (33%), Gaps = 9/74 (12%)
Query: 3 YQQQQCKQPCQPPPVC---------PTPKCPEPCPPPKCPEPYLPPPCPPEHCPPPPCQD 53
Y + ++P PPV P PPPK P P P P + P +
Sbjct: 1658 YVRVCARKPWHRPPVPVRRSGQAKNPVSAGGSSAPPPKAPAPPPKPETPEKTTSEKPPEQ 1717
Query: 54 KCPPVQPYPPCQQK 67
P PP +K
Sbjct: 1718 TPETAMPEPPAPEK 1731
Score = 27.3 bits (59), Expect = 2.6
Identities = 18/58 (31%), Positives = 21/58 (36%), Gaps = 19/58 (32%)
Query: 11 PCQPPPVCPTPKCPEPCPPPKC----------------PEPYLPPPCPPEHCPPPPCQ 52
P PP + P+ P P P P+P PPP PP PP P Q
Sbjct: 795 PPPPPQLLPSVLSHAPSPSPSASKVGVHLLEPATRDGAPQPPPPPPPPP---PPMPLQ 849
Score = 26.2 bits (56), Expect = 5.9
Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
Query: 11 PCQPPPVCPTPKCPEPCPPPK 31
P Q PP P P P+P PPP+
Sbjct: 221 PAQTPPYRPGP--PDPPPPPR 239
>gi|30387656 late cornified envelope 1B [Homo sapiens]
Length = 118
Score = 53.1 bits (126), Expect = 4e-08
Identities = 26/43 (60%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPYLPPPCPP 43
MS QQ Q Q CQPPP C PKCP C P+CP P PP CPP
Sbjct: 1 MSCQQNQ--QQCQPPPKC-IPKCPPKCLTPRCP-PKCPPKCPP 39
Score = 34.3 bits (77), Expect = 0.022
Identities = 14/25 (56%), Positives = 14/25 (56%)
Query: 47 PPPPCQDKCPPVQPYPPCQQKYPPK 71
PPP C KCPP P C K PPK
Sbjct: 12 PPPKCIPKCPPKCLTPRCPPKCPPK 36
>gi|7657685 late cornified envelope 2B [Homo sapiens]
Length = 110
Score = 52.0 bits (123), Expect = 1e-07
Identities = 32/62 (51%), Positives = 32/62 (51%), Gaps = 9/62 (14%)
Query: 1 MSYQQQQCKQPCQPPPVCP---TPKCPEPCPPPKCPEPYLPPPCPP--EHCPPPPCQDKC 55
MS QQ Q Q CQPPP CP TPKCP C PPKC P P PC P C P C
Sbjct: 1 MSCQQNQ--QQCQPPPKCPPKCTPKCPPKC-PPKC-LPQCPAPCSPAVSSCCGPISGGCC 56
Query: 56 PP 57
P
Sbjct: 57 GP 58
Score = 26.6 bits (57), Expect = 4.5
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 8/28 (28%)
Query: 44 EHCPPPPCQDKCPPVQPYPPCQQKYPPK 71
+ C PPP KCPP C K PPK
Sbjct: 8 QQCQPPP---KCPP-----KCTPKCPPK 27
>gi|30387648 late cornified envelope 1D [Homo sapiens]
Length = 114
Score = 52.0 bits (123), Expect = 1e-07
Identities = 23/38 (60%), Positives = 24/38 (63%), Gaps = 6/38 (15%)
Query: 6 QQCKQPCQPPPVCPTPKCPEPCPPPKCPEPYLPPPCPP 43
QQ +Q CQPPP C TPKC CP PKC PP CPP
Sbjct: 4 QQSQQQCQPPPKC-TPKCTPKCPAPKC-----PPKCPP 35
Score = 35.0 bits (79), Expect = 0.013
Identities = 14/26 (53%), Positives = 14/26 (53%)
Query: 47 PPPPCQDKCPPVQPYPPCQQKYPPKS 72
PPP C KC P P P C K PP S
Sbjct: 12 PPPKCTPKCTPKCPAPKCPPKCPPVS 37
>gi|119120861 formin-like 3 isoform 2 [Homo sapiens]
Length = 976
Score = 51.6 bits (122), Expect = 1e-07
Identities = 21/37 (56%), Positives = 22/37 (59%)
Query: 26 PCPPPKCPEPYLPPPCPPEHCPPPPCQDKCPPVQPYP 62
P PPP+ P PPP PP PPPP DKCPP P P
Sbjct: 457 PAPPPEEVLPLPPPPAPPLPPPPPPLPDKCPPAPPLP 493
Score = 35.8 bits (81), Expect = 0.007
Identities = 18/37 (48%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 14 PPPVCPTPKCPEPCPPPKCPEPYLPPPCPPEHCPPPP 50
PPP P P P PP P P LP CPP PP P
Sbjct: 459 PPPEEVLPLPPPPAPPLPPPPPPLPDKCPP--APPLP 493
>gi|119120874 formin-like 3 isoform 1 [Homo sapiens]
Length = 1027
Score = 51.6 bits (122), Expect = 1e-07
Identities = 21/37 (56%), Positives = 22/37 (59%)
Query: 26 PCPPPKCPEPYLPPPCPPEHCPPPPCQDKCPPVQPYP 62
P PPP+ P PPP PP PPPP DKCPP P P
Sbjct: 508 PAPPPEEVLPLPPPPAPPLPPPPPPLPDKCPPAPPLP 544
Score = 35.8 bits (81), Expect = 0.007
Identities = 18/37 (48%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 14 PPPVCPTPKCPEPCPPPKCPEPYLPPPCPPEHCPPPP 50
PPP P P P PP P P LP CPP PP P
Sbjct: 510 PPPEEVLPLPPPPAPPLPPPPPPLPDKCPP--APPLP 544
>gi|90903231 huntingtin [Homo sapiens]
Length = 3144
Score = 50.4 bits (119), Expect = 3e-07
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 4 QQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPYLPPPCPPEHCPPPP 50
QQQQ +QP PPP P P+ P+ PPP+ +P LP P PP PPPP
Sbjct: 34 QQQQQQQPPPPPPPPPPPQLPQ--PPPQA-QPLLPQPQPPPPPPPPP 77
Score = 42.0 bits (97), Expect = 1e-04
Identities = 26/60 (43%), Positives = 28/60 (46%), Gaps = 12/60 (20%)
Query: 4 QQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPYLPPPCPPEHCPPPPCQDKCPPVQPYPP 63
QQQQ +Q QPPP PPP P P LP P PP+ P P PP P PP
Sbjct: 31 QQQQQQQQQQPPP-----------PPPPPPPPQLPQP-PPQAQPLLPQPQPPPPPPPPPP 78
Score = 37.0 bits (84), Expect = 0.003
Identities = 24/61 (39%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
Query: 4 QQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPYLPPPCPPE-HCPPPPCQDKCPPVQPYP 62
QQQQ +Q Q + +P PPP PPP PP+ PPP Q P QP P
Sbjct: 19 QQQQQQQQQQQQQQQQQQQQQQPPPPP-------PPPPPPQLPQPPPQAQPLLPQPQPPP 71
Query: 63 P 63
P
Sbjct: 72 P 72
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 50.4 bits (119), Expect = 3e-07
Identities = 28/61 (45%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Query: 11 PCQPPPVCPTPKCPEPCPPPKCPEPYLPPPCPPEHCPPPPCQD-KCPPVQPYPPCQQKYP 69
P PP P P PEP P P P PPP PP PPPP D PP P PP P
Sbjct: 559 PSAPPQAPPLPGSPEPPPAPPLPGDLPPPPPPP---PPPPGTDGPVPPPPPPPPPPPGGP 615
Query: 70 P 70
P
Sbjct: 616 P 616
Score = 39.7 bits (91), Expect = 5e-04
Identities = 23/52 (44%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 14 PPPVCPTPKCPEPCPPPKCPEPYLPP-PCPPEHCPPPPCQ-DKCPPVQPYPP 63
PPP P P P P P P PP P PE P PP D PP P PP
Sbjct: 542 PPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPPPPPPPP 593
Score = 38.9 bits (89), Expect = 9e-04
Identities = 22/62 (35%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 11 PCQPPPVCPTPKCPEPCPPPK--CPEPYLPPPCPPEHCPPPPCQDKCPPVQPYPPCQQKY 68
P P P P P PPP P P PP P PP P + PP P P
Sbjct: 528 PDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPP 587
Query: 69 PP 70
PP
Sbjct: 588 PP 589
Score = 32.3 bits (72), Expect = 0.082
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 11 PCQPPPVCPTPKCPEPCPPPKCPEPYLPPPCPPE 44
P PPP P P P PPP P P PP PP+
Sbjct: 585 PPPPPPPPPPPGTDGPVPPPP-PPPPPPPGGPPD 617
Score = 29.6 bits (65), Expect = 0.53
Identities = 21/62 (33%), Positives = 21/62 (33%), Gaps = 6/62 (9%)
Query: 15 PPVCPTPK---CPEPCPPPKCPEPYLPP---PCPPEHCPPPPCQDKCPPVQPYPPCQQKY 68
P TP P P P P P L P P P PPPP P Q PP
Sbjct: 505 PVAVATPSGGDAPTPGVPTGSPSPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQ 564
Query: 69 PP 70
P
Sbjct: 565 AP 566
Score = 27.7 bits (60), Expect = 2.0
Identities = 19/65 (29%), Positives = 22/65 (33%), Gaps = 9/65 (13%)
Query: 15 PPVCPTPKCPEPCPPPKCPEPYLPPPCPPEHCP---PPPCQDKCPPV------QPYPPCQ 65
P P+P P P PPP P P PP + PP+ P PP
Sbjct: 522 PTGSPSPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLP 581
Query: 66 QKYPP 70
PP
Sbjct: 582 GDLPP 586
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 50.1 bits (118), Expect = 4e-07
Identities = 29/70 (41%), Positives = 36/70 (51%), Gaps = 14/70 (20%)
Query: 4 QQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPYLPPPCPPEHCPPPPCQDKCPPVQPYPP 63
++++ K P PPP+ P P P PPP P P P PP CPPPP PPV P PP
Sbjct: 395 EKEEAKLP--PPPLTP----PAPSPPPPLPPPSTSP--PPPLCPPPP-----PPVSP-PP 440
Query: 64 CQQKYPPKSK 73
PP ++
Sbjct: 441 LPSPPPPPAQ 450
Score = 42.0 bits (97), Expect = 1e-04
Identities = 28/63 (44%), Positives = 32/63 (50%), Gaps = 11/63 (17%)
Query: 11 PCQPPPVCPTPKCPEP--CPPPKCPEPYLPPPCPPEHCPPPPCQDK----CPPVQPYPPC 64
P PPP+ P P P CPPP P P PPP P PPPP Q++ PPV P C
Sbjct: 411 PSPPPPLPPPSTSPPPPLCPPP--PPPVSPPPLP-SP-PPPPAQEEQEESPPPVVP-ATC 465
Query: 65 QQK 67
+K
Sbjct: 466 SRK 468
Score = 36.2 bits (82), Expect = 0.006
Identities = 22/56 (39%), Positives = 24/56 (42%), Gaps = 13/56 (23%)
Query: 14 PPPVCPTPKCPEPCPPPKCPEPYLPPPCPP------EHCPPPPCQDKCPPVQPYPP 63
PPP+CP P P PPP LP P PP E PPP C + PP
Sbjct: 425 PPPLCPPPP-PPVSPPP------LPSPPPPPAQEEQEESPPPVVPATCSRKRGRPP 473
Score = 33.9 bits (76), Expect = 0.028
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 7/45 (15%)
Query: 11 PCQPPPVCPTPKCPEPCPPP------KCPEPYLPPPCPPEHCPPP 49
P PPPV P P P P PPP + P P +P C + PP
Sbjct: 430 PPPPPPVSP-PPLPSPPPPPAQEEQEESPPPVVPATCSRKRGRPP 473
Score = 31.6 bits (70), Expect = 0.14
Identities = 23/75 (30%), Positives = 25/75 (33%), Gaps = 22/75 (29%)
Query: 11 PCQPPPVCPTPKCP-EPCPPPKCPEPYLPPPCP---PE------------------HCPP 48
P PP+ +P P EP P P P PP P PE PP
Sbjct: 561 PVLRPPITTSPPVPQEPAPVPSPPRAPTPPSTPVPLPEKRRSILREPTFRWTSLTRELPP 620
Query: 49 PPCQDKCPPVQPYPP 63
PP PP PP
Sbjct: 621 PPPAPPPPPAPSPPP 635
Score = 30.0 bits (66), Expect = 0.41
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Query: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPYLPPPCPPEHCPP 48
+S Q Q QP T P+ PPP +P L PP P+ PP
Sbjct: 727 LSNGPQTQAQLLQPLQALQTQLLPQALPPP---QPQLQPPPSPQQMPP 771
Score = 28.9 bits (63), Expect = 0.90
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 15 PPVCPTPKCPEPCPPPKCPEPYLPPP 40
PP P+ PEP PPP P P P
Sbjct: 668 PPPLGAPEAPEPEPPPADDSPAEPEP 693
Score = 28.1 bits (61), Expect = 1.5
Identities = 23/75 (30%), Positives = 26/75 (34%), Gaps = 28/75 (37%)
Query: 14 PPPVCPTPKCPEPCPPP----------KCP-----EPYL--------PPPCPPEHCP--- 47
PPP P P P P P P + P E +L PPP P
Sbjct: 621 PPPAPPPPPAPSPPPAPATSSRRPLLLRAPQFTPSEAHLKIYESVLTPPPLGAPEAPEPE 680
Query: 48 PPPCQDKCPPVQPYP 62
PPP D P +P P
Sbjct: 681 PPPADDS--PAEPEP 693
Score = 26.6 bits (57), Expect = 4.5
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 7/46 (15%)
Query: 9 KQPCQPPPVCPTPKCPEPCPPPK----CPEPYLPPPCPPEHCPPPP 50
KQP PP + PT PP P + P PP PPPP
Sbjct: 2216 KQPPLPPTISPTAPTSWTLPPGPLLGVLPVVGVVRPAPP---PPPP 2258
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 48.9 bits (115), Expect = 8e-07
Identities = 30/74 (40%), Positives = 30/74 (40%), Gaps = 15/74 (20%)
Query: 11 PCQPPPVCPTPKCPEPCPPPKC--------PEPYLPPPC-----PPEHCPPPPCQDKC-P 56
P PPPV P P P PPP P P LPPP PP PPP P
Sbjct: 558 PGMPPPVMP-PSLPTSVPPPGMPPSLSSAGPPPVLPPPSLSSAGPPPVLPPPSLSSTAPP 616
Query: 57 PVQPYPPCQQKYPP 70
PV P PP PP
Sbjct: 617 PVMPLPPLSSATPP 630
Score = 47.0 bits (110), Expect = 3e-06
Identities = 27/64 (42%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Query: 11 PCQPPPVCPTPKCPEPCPPPKCPEPYLPPPCPPEHCPP--PPCQDKC--PPVQPYPPCQQ 66
P PPPV P P P PPP P P +PP P PP PP PPV P P
Sbjct: 540 PSLPPPVMP-PALPATVPPPGMPPPVMPPSLPTSVPPPGMPPSLSSAGPPPVLPPPSLSS 598
Query: 67 KYPP 70
PP
Sbjct: 599 AGPP 602
Score = 45.8 bits (107), Expect = 7e-06
Identities = 24/59 (40%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Query: 14 PPPVCPTPKCPEPCPPPKCPEPYLPPPCPPEHCPPPPCQDKCPPVQ-PYPPCQQKYPPK 71
PPPV P P PPP P P L PP P PP PP P P Q PP+
Sbjct: 587 PPPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMPLPPLSSATPPPGIPPPGVPQGIPPQ 645
Score = 39.3 bits (90), Expect = 7e-04
Identities = 31/86 (36%), Positives = 37/86 (43%), Gaps = 18/86 (20%)
Query: 1 MSYQQQQC-------KQPCQPPPVCP----TPKCPEPCPPPKCPEP---YLPPPCPP-EH 45
+SYQ+QQ Q PP + P +P P PP P Y+PPP PP +
Sbjct: 115 LSYQKQQQYKHQMLHHQRDGPPGLVPMELESPPESPPVPPGSYMPPSQSYMPPPQPPPSY 174
Query: 46 CPPPPCQDKCPPVQPYP---PCQQKY 68
PP Q PP QP P P Q Y
Sbjct: 175 YPPTSSQPYLPPAQPSPSQSPPSQSY 200
Score = 38.5 bits (88), Expect = 0.001
Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 12/67 (17%)
Query: 14 PPPVCPTPKCPEPCPPP---------KCPEPYLPPPCPPEHCPPPPCQDKCPPVQPYPPC 64
PPPV P P PPP P P +PPP P+ PP Q PV P
Sbjct: 601 PPPVLPPPSLSSTAPPPVMPLPPLSSATPPPGIPPPGVPQGIPP---QLTAAPVPPASSS 657
Query: 65 QQKYPPK 71
Q P+
Sbjct: 658 QSSQVPE 664
Score = 38.5 bits (88), Expect = 0.001
Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Query: 14 PPPVCPTPKCPEPCPPPKCPEPYLPPPCPPE--HCPPPPC---QDKCPPVQPYP 62
PPPV P P PPP P P +P PP+ P PP Q P +P P
Sbjct: 615 PPPVMPLPPLSSATPPPGIPPPGVPQGIPPQLTAAPVPPASSSQSSQVPEKPRP 668
Score = 38.1 bits (87), Expect = 0.001
Identities = 24/64 (37%), Positives = 26/64 (40%), Gaps = 12/64 (18%)
Query: 14 PPPVCPTPKCPEPCP-------PPKCPEPYLPPPCPPEHCPPPPCQDKCPPVQPYPPCQQ 66
PPP P + P P P PP P P +PP P PPP PPV P P
Sbjct: 517 PPPFVPYSQMPPPLPTMPPPVLPPSLPPPVMPPALPAT-VPPPGMP---PPVMP-PSLPT 571
Query: 67 KYPP 70
PP
Sbjct: 572 SVPP 575
Score = 37.7 bits (86), Expect = 0.002
Identities = 22/68 (32%), Positives = 24/68 (35%)
Query: 6 QQCKQPCQPPPVCPTPKCPEPCPPPKCPEPYLPPPCPPEHCPPPPCQDKCPPVQPYPPCQ 65
Q P QPPP P +P PP P P PP P P Q Y
Sbjct: 162 QSYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQSPPSQSYLAPTPSYSSSSSSSQSYLSHS 221
Query: 66 QKYPPKSK 73
Q Y P S+
Sbjct: 222 QSYLPSSQ 229
Score = 33.9 bits (76), Expect = 0.028
Identities = 30/101 (29%), Positives = 33/101 (32%), Gaps = 31/101 (30%)
Query: 1 MSYQQQQCK-QP--CQPPPVCPTPKCP-------EPCPPPKCPEPYL------------- 37
M +Q QC QP PPP+ P P P +P PPP P P
Sbjct: 67 MHQKQMQCVLQPHHLPPPPLPPPPVMPGGGYGDWQPPPPPMPPPPGPALSYQKQQQYKHQ 126
Query: 38 --------PPPCPPEHCPPPPCQDKCPPVQPYPPCQQKYPP 70
PP P PP PP PP Q PP
Sbjct: 127 MLHHQRDGPPGLVPMELESPPESPPVPPGSYMPPSQSYMPP 167
Score = 31.2 bits (69), Expect = 0.18
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 9/46 (19%)
Query: 14 PPPVCPTP-KCPEPCPPP--------KCPEPYLPPPCPPEHCPPPP 50
PPP+ P P PP + P P PPP PP PPPP
Sbjct: 1515 PPPMGKPPGSIVRPSAPPARSSVPVTRPPVPIPPPPPPPPLPPPPP 1560
Score = 29.3 bits (64), Expect = 0.69
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 15/72 (20%)
Query: 4 QQQQCKQPCQPPPVCPTPKCPEPCPPPKCP-----EPYLPP-------PCPPEHCPPPPC 51
Q+ + + P + P P P PP P P PP PP PPPP
Sbjct: 1492 QESRLQNTSSRPGMYPPPGSYRPPPPMGKPPGSIVRPSAPPARSSVPVTRPPVPIPPPP- 1550
Query: 52 QDKCPPVQPYPP 63
PP+ P PP
Sbjct: 1551 --PPPPLPPPPP 1560
Score = 29.3 bits (64), Expect = 0.69
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 35 PYLPPPCPPEHCPPP-PCQDKCPPVQPYPPCQQ 66
P LPPP PPP P PP+ PP QQ
Sbjct: 1606 PVLPPPPVHSSIPPPGPVPMGMPPMSKPPPVQQ 1638
Score = 27.3 bits (59), Expect = 2.6
Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 4/47 (8%)
Query: 14 PPPVCPTPKCPEPCPPPKCPEPYLPPPCPPEHCPPPPCQDKCPPVQP 60
P PV P P+ P PP PP PPP PP +P
Sbjct: 327 PEPVKEEVTVPATSQVPESPSSEEPPLPPPNEEVPPP----LPPEEP 369
Score = 26.2 bits (56), Expect = 5.9
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Query: 28 PPPKCPEPYLPPPCPPEHCPPPPCQDKCPPVQP 60
PPP P P PP PE P P P P
Sbjct: 15 PPPPVPPP--PPVALPEASPGPGYSSSTTPAAP 45
Score = 25.8 bits (55), Expect = 7.7
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 37 LPPPCPPEHCPPPPCQDKCPPVQP 60
+PPP P PPP PPV P
Sbjct: 516 MPPPFVPYSQMPPPLPTMPPPVLP 539
>gi|30410037 late cornified envelope 3C [Homo sapiens]
Length = 94
Score = 48.5 bits (114), Expect = 1e-06
Identities = 24/40 (60%), Positives = 25/40 (62%), Gaps = 7/40 (17%)
Query: 1 MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPYLPPP 40
MS QQ Q Q CQPPP CP+PKC PPK P LPPP
Sbjct: 1 MSCQQNQ--QQCQPPPSCPSPKC-----PPKSPAQCLPPP 33
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.145 0.568
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,753,988
Number of Sequences: 37866
Number of extensions: 701800
Number of successful extensions: 19136
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 604
Number of HSP's that attempted gapping in prelim test: 4468
Number of HSP's gapped (non-prelim): 7864
length of query: 73
length of database: 18,247,518
effective HSP length: 46
effective length of query: 27
effective length of database: 16,505,682
effective search space: 445653414
effective search space used: 445653414
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.