BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|61743938 G-protein coupled receptor 110 isoform 2 [Homo sapiens] (218 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|61743938 G-protein coupled receptor 110 isoform 2 [Homo sapiens] 454 e-128 gi|61743940 G-protein coupled receptor 110 isoform 1 [Homo sapiens] 427 e-120 gi|148719671 G-protein coupled receptor 116 [Homo sapiens] 67 9e-12 gi|148719673 G-protein coupled receptor 116 [Homo sapiens] 67 9e-12 gi|6631090 interphotoreceptor matrix proteoglycan 1 [Homo sapiens] 39 0.003 gi|190343004 EGF-containing fibulin-like extracellular matrix pr... 38 0.006 gi|115430108 rho-related BTB domain containing 3 [Homo sapiens] 32 0.55 gi|41327708 crumbs homolog 1 precursor [Homo sapiens] 31 0.71 gi|219842266 usherin isoform B [Homo sapiens] 30 1.2 gi|219842259 usherin isoform A [Homo sapiens] 30 1.2 gi|122937398 dynein, cytoplasmic 2, heavy chain 1 [Homo sapiens] 30 1.2 gi|120587029 signal peptide, CUB domain, EGF-like 1 [Homo sapiens] 30 1.2 gi|61743978 stabilin 1 precursor [Homo sapiens] 29 2.7 gi|31377568 signal peptide, CUB domain, EGF-like 3 [Homo sapiens] 29 2.7 gi|166362728 epidermal growth factor (beta-urogastrone) [Homo sa... 29 3.5 gi|66346695 fibrillin 2 precursor [Homo sapiens] 29 3.5 gi|7656967 cadherin EGF LAG seven-pass G-type receptor 1 [Homo s... 29 3.5 gi|46249414 latent transforming growth factor beta binding prote... 28 4.6 gi|46249412 latent transforming growth factor beta binding prote... 28 4.6 gi|4504927 keratin 36 [Homo sapiens] 28 4.6 gi|56550049 uromodulin precursor [Homo sapiens] 28 4.6 gi|59850812 uromodulin precursor [Homo sapiens] 28 4.6 gi|208879446 proenkephalin [Homo sapiens] 28 4.6 gi|5453876 proenkephalin [Homo sapiens] 28 4.6 gi|223555935 dynein, axonemal, heavy polypeptide 14 isoform 1 [H... 28 6.0 gi|10190748 CEGP1 protein [Homo sapiens] 28 7.9 >gi|61743938 G-protein coupled receptor 110 isoform 2 [Homo sapiens] Length = 218 Score = 454 bits (1169), Expect = e-128 Identities = 218/218 (100%), Positives = 218/218 (100%) Query: 1 MKVGVLWLISFFTFTDGHGGFLGKNDGIKTKKELIVNKKKHLGPVEEYQLLLQVTYRDSK 60 MKVGVLWLISFFTFTDGHGGFLGKNDGIKTKKELIVNKKKHLGPVEEYQLLLQVTYRDSK Sbjct: 1 MKVGVLWLISFFTFTDGHGGFLGKNDGIKTKKELIVNKKKHLGPVEEYQLLLQVTYRDSK 60 Query: 61 EKRDLRNFLKLLKPPLLWSHGLIRIIRAKATTDCNSLNGVLQCTCEDSYTWFPPSCLDPQ 120 EKRDLRNFLKLLKPPLLWSHGLIRIIRAKATTDCNSLNGVLQCTCEDSYTWFPPSCLDPQ Sbjct: 61 EKRDLRNFLKLLKPPLLWSHGLIRIIRAKATTDCNSLNGVLQCTCEDSYTWFPPSCLDPQ 120 Query: 121 NCYLHTAGALPSCECHLNNLSQSVNFCERTKIWGTFKINERFTNDLLNSSSAIYSKYANG 180 NCYLHTAGALPSCECHLNNLSQSVNFCERTKIWGTFKINERFTNDLLNSSSAIYSKYANG Sbjct: 121 NCYLHTAGALPSCECHLNNLSQSVNFCERTKIWGTFKINERFTNDLLNSSSAIYSKYANG 180 Query: 181 IEIQLKKAYERIQGFESVQVTQFRMSLLSPKLECNGTI 218 IEIQLKKAYERIQGFESVQVTQFRMSLLSPKLECNGTI Sbjct: 181 IEIQLKKAYERIQGFESVQVTQFRMSLLSPKLECNGTI 218 >gi|61743940 G-protein coupled receptor 110 isoform 1 [Homo sapiens] Length = 910 Score = 427 bits (1097), Expect = e-120 Identities = 204/204 (100%), Positives = 204/204 (100%) Query: 1 MKVGVLWLISFFTFTDGHGGFLGKNDGIKTKKELIVNKKKHLGPVEEYQLLLQVTYRDSK 60 MKVGVLWLISFFTFTDGHGGFLGKNDGIKTKKELIVNKKKHLGPVEEYQLLLQVTYRDSK Sbjct: 1 MKVGVLWLISFFTFTDGHGGFLGKNDGIKTKKELIVNKKKHLGPVEEYQLLLQVTYRDSK 60 Query: 61 EKRDLRNFLKLLKPPLLWSHGLIRIIRAKATTDCNSLNGVLQCTCEDSYTWFPPSCLDPQ 120 EKRDLRNFLKLLKPPLLWSHGLIRIIRAKATTDCNSLNGVLQCTCEDSYTWFPPSCLDPQ Sbjct: 61 EKRDLRNFLKLLKPPLLWSHGLIRIIRAKATTDCNSLNGVLQCTCEDSYTWFPPSCLDPQ 120 Query: 121 NCYLHTAGALPSCECHLNNLSQSVNFCERTKIWGTFKINERFTNDLLNSSSAIYSKYANG 180 NCYLHTAGALPSCECHLNNLSQSVNFCERTKIWGTFKINERFTNDLLNSSSAIYSKYANG Sbjct: 121 NCYLHTAGALPSCECHLNNLSQSVNFCERTKIWGTFKINERFTNDLLNSSSAIYSKYANG 180 Query: 181 IEIQLKKAYERIQGFESVQVTQFR 204 IEIQLKKAYERIQGFESVQVTQFR Sbjct: 181 IEIQLKKAYERIQGFESVQVTQFR 204 >gi|148719671 G-protein coupled receptor 116 [Homo sapiens] Length = 1346 Score = 67.4 bits (163), Expect = 9e-12 Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 13/168 (7%) Query: 46 EEYQLLLQVTYRDSKEKRDLRNFLKLLKPPLLWSHG-----LIRIIRAKATTDCNSLNGV 100 EEY + +++++ ++ ++ +L L P+ HG + I+ TT C Sbjct: 61 EEYTVNIEISFENASFLDPIKAYLNSLSFPI---HGNNTDQITDILSINVTTVCRPAGNE 117 Query: 101 LQCTCEDSYTWFPPSCLDPQNCYLHTAGALPSCECH-LNNLSQSVNFC---ERTKIWGTF 156 + C+CE Y W CL C LP C L L + FC E + Sbjct: 118 IWCSCETGYGWPRERCLHNLICQERDV-FLPGHHCSCLKELPPNGPFCLLQEDVTLNMRV 176 Query: 157 KINERFTNDLLNSSSAIYSKYANGIEIQLKKAYERIQGFESVQVTQFR 204 ++N F DL+N+SSA+Y Y +E +K Y + GF+ V VT F+ Sbjct: 177 RLNVGFQEDLMNTSSALYRSYKTDLETAFRKGYGILPGFKGVTVTGFK 224 >gi|148719673 G-protein coupled receptor 116 [Homo sapiens] Length = 1346 Score = 67.4 bits (163), Expect = 9e-12 Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 13/168 (7%) Query: 46 EEYQLLLQVTYRDSKEKRDLRNFLKLLKPPLLWSHG-----LIRIIRAKATTDCNSLNGV 100 EEY + +++++ ++ ++ +L L P+ HG + I+ TT C Sbjct: 61 EEYTVNIEISFENASFLDPIKAYLNSLSFPI---HGNNTDQITDILSINVTTVCRPAGNE 117 Query: 101 LQCTCEDSYTWFPPSCLDPQNCYLHTAGALPSCECH-LNNLSQSVNFC---ERTKIWGTF 156 + C+CE Y W CL C LP C L L + FC E + Sbjct: 118 IWCSCETGYGWPRERCLHNLICQERDV-FLPGHHCSCLKELPPNGPFCLLQEDVTLNMRV 176 Query: 157 KINERFTNDLLNSSSAIYSKYANGIEIQLKKAYERIQGFESVQVTQFR 204 ++N F DL+N+SSA+Y Y +E +K Y + GF+ V VT F+ Sbjct: 177 RLNVGFQEDLMNTSSALYRSYKTDLETAFRKGYGILPGFKGVTVTGFK 224 >gi|6631090 interphotoreceptor matrix proteoglycan 1 [Homo sapiens] Length = 797 Score = 39.3 bits (90), Expect = 0.003 Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 5/60 (8%) Query: 158 INERFTNDLLNSSSAIYSKYANGIEIQLKKAYERIQGFESVQVTQFRMSLLSPKLECNGT 217 +N++F +L +S S Y + A ++Q++K ++++ GF+ + V FR PK E +G+ Sbjct: 243 VNQKFKAELADSQSPYYQELAGKSQLQMQKIFKKLPGFKKIHVLGFR-----PKKEKDGS 297 >gi|190343004 EGF-containing fibulin-like extracellular matrix protein 2 [Homo sapiens] Length = 443 Score = 38.1 bits (87), Expect = 0.006 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 7/54 (12%) Query: 89 KATTDCNSLNGVLQCTCEDSYTWFPPSCLDPQNCYL----HTAGALPS---CEC 135 + + DC++L G QCTC D Y P C+D C H LP C+C Sbjct: 135 RPSQDCHNLPGSYQCTCPDGYRKIGPECVDIDECRYRYCQHRCVNLPGSFRCQC 188 >gi|115430108 rho-related BTB domain containing 3 [Homo sapiens] Length = 611 Score = 31.6 bits (70), Expect = 0.55 Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 14/113 (12%) Query: 15 TDGHGGFLGKNDGIKTKKELIVNKK-----------KHLGPVEEYQLLLQVTYRDSKE-- 61 T G + +GI+ KEL K+ G V EY ++ + + S++ Sbjct: 149 TSDRGSCVSTTEGIQLAKELGATYLELHSLDDFYIGKYFGGVLEYFMIQALNQKTSEKMK 208 Query: 62 KRDLRNFLKLLKPPLLWSHGLIRIIRAKATTDCNSLNGVL-QCTCEDSYTWFP 113 KR + N ++PP L + +++A+A+ + LN +L C C D + P Sbjct: 209 KRKMSNSFHGIRPPQLEQPEKMPVLKAEASHYNSDLNNLLFCCQCVDVVFYNP 261 >gi|41327708 crumbs homolog 1 precursor [Homo sapiens] Length = 1406 Score = 31.2 bits (69), Expect = 0.71 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 9/76 (11%) Query: 93 DCNSLNGVLQCTCEDSYTWFPPSC-LDPQNCYLHTAGALPSCECHLNNLS------QSVN 145 +C+ CTCE YT +C +D NC H +C H N S + Sbjct: 1190 NCSDRVAAYHCTCEPGYTGV--NCEVDIDNCQSHQCANGATCISHTNGYSCLCFGNFTGK 1247 Query: 146 FCERTKIWGTFKINER 161 FC ++++ T NE+ Sbjct: 1248 FCRQSRLPSTVCGNEK 1263 >gi|219842266 usherin isoform B [Homo sapiens] Length = 5202 Score = 30.4 bits (67), Expect = 1.2 Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 12/55 (21%) Query: 94 CNSLNGVLQCT-----------CEDSYTWFPPSCLDPQNCYLHTAGALPSCECHL 137 CNSL G C C+D Y F P Q C H +GAL CHL Sbjct: 963 CNSLTGQCVCQDASIAGQRCDQCKDHYFGFDPQTGRCQPCNCHLSGALNE-TCHL 1016 >gi|219842259 usherin isoform A [Homo sapiens] Length = 1546 Score = 30.4 bits (67), Expect = 1.2 Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 12/55 (21%) Query: 94 CNSLNGVLQCT-----------CEDSYTWFPPSCLDPQNCYLHTAGALPSCECHL 137 CNSL G C C+D Y F P Q C H +GAL CHL Sbjct: 963 CNSLTGQCVCQDASIAGQRCDQCKDHYFGFDPQTGRCQPCNCHLSGALNE-TCHL 1016 >gi|122937398 dynein, cytoplasmic 2, heavy chain 1 [Homo sapiens] Length = 4314 Score = 30.4 bits (67), Expect = 1.2 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Query: 130 LPSCECHLNNLSQSVNFCERTKIWGTFKINERFTNDLLNSSSAIYSKYANGIEIQLKKAY 189 LP E LN L F ++W T +++ FT LL SS I + G++ L + Y Sbjct: 3796 LPVLEKELNTLQPKDTF----RLWLTAEVHPNFTPILLQSSLKITYESPPGLKKNLMRTY 3851 Query: 190 E 190 E Sbjct: 3852 E 3852 >gi|120587029 signal peptide, CUB domain, EGF-like 1 [Homo sapiens] Length = 988 Score = 30.4 bits (67), Expect = 1.2 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 7/60 (11%) Query: 91 TTDCNSLNGVLQCTCEDSYTWFPPSCLDPQNCYLHTAGALPSCECHLNNLSQSVNFCERT 150 T CN NG Q +CED+ T P+C Q LH+ G C +NN C+RT Sbjct: 203 TLTCNYGNGGCQHSCEDTDT--GPTCGCHQKYALHSDGRTCIETCAVNN-----GGCDRT 255 >gi|61743978 stabilin 1 precursor [Homo sapiens] Length = 2570 Score = 29.3 bits (64), Expect = 2.7 Identities = 12/37 (32%), Positives = 16/37 (43%) Query: 99 GVLQCTCEDSYTWFPPSCLDPQNCYLHTAGALPSCEC 135 G CTC+D Y C + +C +H G EC Sbjct: 1478 GQRTCTCQDGYMGDGELCQEINSCLIHHGGCHIHAEC 1514 >gi|31377568 signal peptide, CUB domain, EGF-like 3 [Homo sapiens] Length = 993 Score = 29.3 bits (64), Expect = 2.7 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 9/53 (16%) Query: 93 DCNSLNGVLQCTCEDSY--TWFPPSCLDPQNCYLHTAGALPSC-------ECH 136 DC ++ G +CTC D + +CLD C G SC ECH Sbjct: 85 DCVNIPGNYRCTCYDGFHLAHDGHNCLDVDECAEGNGGCQQSCVNMMGSYECH 137 >gi|166362728 epidermal growth factor (beta-urogastrone) [Homo sapiens] Length = 1207 Score = 28.9 bits (63), Expect = 3.5 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 2/46 (4%) Query: 90 ATTDCNSLNGVLQCTCEDSYTWFPPSCLDPQNCYL--HTAGALPSC 133 A++ C + G C C + Y CLD C L H+ G SC Sbjct: 884 ASSKCINTEGGYVCRCSEGYQGDGIHCLDIDECQLGEHSCGENASC 929 >gi|66346695 fibrillin 2 precursor [Homo sapiens] Length = 2912 Score = 28.9 bits (63), Expect = 3.5 Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 2/40 (5%) Query: 85 IIRAKATTDCNSLNGVLQCTCEDSYTWFPP--SCLDPQNC 122 I+ T C + G +C+C + Y P SC D C Sbjct: 1248 IMNGGCDTQCTNSEGSYECSCSEGYALMPDGRSCADIDEC 1287 Score = 28.5 bits (62), Expect = 4.6 Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 8/37 (21%) Query: 94 CNSLNGVLQCTCEDSYTWFP--------PSCLDPQNC 122 CN+L G+ C C+D Y C DP NC Sbjct: 1506 CNNLPGMFHCICDDGYELDRTGGNCTDIDECADPINC 1542 >gi|7656967 cadherin EGF LAG seven-pass G-type receptor 1 [Homo sapiens] Length = 3014 Score = 28.9 bits (63), Expect = 3.5 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 11/64 (17%) Query: 93 DCNSLNGVLQCTCEDSY--TWFPPSCLDPQNCYLHTAG------ALPSCECHLNNLSQSV 144 DCN NG QC C+++Y +CL P +C+ H + A C C + + Sbjct: 1977 DCNKTNG--QCQCKENYYKLLAQDTCL-PCDCFPHGSHSRTCDMATGQCACKPGVIGRQC 2033 Query: 145 NFCE 148 N C+ Sbjct: 2034 NRCD 2037 >gi|46249414 latent transforming growth factor beta binding protein 1 isoform LTBP-1L [Homo sapiens] Length = 1722 Score = 28.5 bits (62), Expect = 4.6 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 2/35 (5%) Query: 90 ATTDCNSLNGVLQCTCEDSYTWFP--PSCLDPQNC 122 A DC++L G C+C YT P C D C Sbjct: 1050 ANGDCSNLEGSYMCSCHKGYTRTPDHKHCRDIDEC 1084 >gi|46249412 latent transforming growth factor beta binding protein 1 isoform LTBP-1S [Homo sapiens] Length = 1396 Score = 28.5 bits (62), Expect = 4.6 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 2/35 (5%) Query: 90 ATTDCNSLNGVLQCTCEDSYTWFP--PSCLDPQNC 122 A DC++L G C+C YT P C D C Sbjct: 724 ANGDCSNLEGSYMCSCHKGYTRTPDHKHCRDIDEC 758 >gi|4504927 keratin 36 [Homo sapiens] Length = 467 Score = 28.5 bits (62), Expect = 4.6 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 6/74 (8%) Query: 128 GALPSCECHLNNLSQSVN-FCERTKIWGTFKINERFTNDLLNSSSAIYSKYANGIEIQLK 186 G+ S ECH + S FCE G+F +E+ T LN A Y + +E + Sbjct: 65 GSYLSSECHTSGFVGSGGWFCE-----GSFNGSEKETMQFLNDRLANYLEKVRQLERENA 119 Query: 187 KAYERIQGFESVQV 200 + RIQ + Q+ Sbjct: 120 ELESRIQEWYEFQI 133 >gi|56550049 uromodulin precursor [Homo sapiens] Length = 640 Score = 28.5 bits (62), Expect = 4.6 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 3/43 (6%) Query: 94 CNSLNGVLQCTCEDSYTWFPPSCLDPQNCYL---HTAGALPSC 133 C V CTC++ +T +C+D C + H A SC Sbjct: 41 CTEDEAVTTCTCQEGFTGDGLTCVDLDECAIPGAHNCSANSSC 83 >gi|59850812 uromodulin precursor [Homo sapiens] Length = 640 Score = 28.5 bits (62), Expect = 4.6 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 3/43 (6%) Query: 94 CNSLNGVLQCTCEDSYTWFPPSCLDPQNCYL---HTAGALPSC 133 C V CTC++ +T +C+D C + H A SC Sbjct: 41 CTEDEAVTTCTCQEGFTGDGLTCVDLDECAIPGAHNCSANSSC 83 >gi|208879446 proenkephalin [Homo sapiens] Length = 267 Score = 28.5 bits (62), Expect = 4.6 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 65 LRNFLKLLKPPLLWSHGLIRIIRAKATTDCNSLNGVLQCTCEDSYTWFPPSCLDPQNCYL 124 + FL L LL GL+ +RA+ + DC TC SY P+ ++ C + Sbjct: 1 MARFLTLCTWLLLLGPGLLATVRAECSQDC--------ATC--SYRLVRPADINFLACVM 50 Query: 125 HTAGALPS 132 G LPS Sbjct: 51 ECEGKLPS 58 >gi|5453876 proenkephalin [Homo sapiens] Length = 267 Score = 28.5 bits (62), Expect = 4.6 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 65 LRNFLKLLKPPLLWSHGLIRIIRAKATTDCNSLNGVLQCTCEDSYTWFPPSCLDPQNCYL 124 + FL L LL GL+ +RA+ + DC TC SY P+ ++ C + Sbjct: 1 MARFLTLCTWLLLLGPGLLATVRAECSQDC--------ATC--SYRLVRPADINFLACVM 50 Query: 125 HTAGALPS 132 G LPS Sbjct: 51 ECEGKLPS 58 >gi|223555935 dynein, axonemal, heavy polypeptide 14 isoform 1 [Homo sapiens] Length = 4515 Score = 28.1 bits (61), Expect = 6.0 Identities = 12/38 (31%), Positives = 23/38 (60%) Query: 28 IKTKKELIVNKKKHLGPVEEYQLLLQVTYRDSKEKRDL 65 +K ++ + K++ L VEE+ L LQ Y+D+ ++ L Sbjct: 3132 LKIARQRLAEKQRGLQLVEEHLLFLQAAYKDTVAEKQL 3169 >gi|10190748 CEGP1 protein [Homo sapiens] Length = 999 Score = 27.7 bits (60), Expect = 7.9 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%) Query: 93 DCNSLNGVLQCTCEDSYTWFPP--SCLDPQNCYLHTAGALPSC 133 DC ++ G +CTC D + +CLD C + G +C Sbjct: 101 DCLNIPGNYRCTCFDGFMLAHDGHNCLDVDECLENNGGCQHTC 143 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.321 0.137 0.428 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,551,200 Number of Sequences: 37866 Number of extensions: 368961 Number of successful extensions: 884 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 854 Number of HSP's gapped (non-prelim): 46 length of query: 218 length of database: 18,247,518 effective HSP length: 98 effective length of query: 120 effective length of database: 14,536,650 effective search space: 1744398000 effective search space used: 1744398000 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.