Guide to the Human Genome
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Search of human proteins with 61743938

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|61743938 G-protein coupled receptor 110 isoform 2 [Homo
sapiens]
         (218 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|61743938 G-protein coupled receptor 110 isoform 2 [Homo sapiens]   454   e-128
gi|61743940 G-protein coupled receptor 110 isoform 1 [Homo sapiens]   427   e-120
gi|148719671 G-protein coupled receptor 116 [Homo sapiens]             67   9e-12
gi|148719673 G-protein coupled receptor 116 [Homo sapiens]             67   9e-12
gi|6631090 interphotoreceptor matrix proteoglycan 1 [Homo sapiens]     39   0.003
gi|190343004 EGF-containing fibulin-like extracellular matrix pr...    38   0.006
gi|115430108 rho-related BTB domain containing 3 [Homo sapiens]        32   0.55 
gi|41327708 crumbs homolog 1 precursor [Homo sapiens]                  31   0.71 
gi|219842266 usherin isoform B [Homo sapiens]                          30   1.2  
gi|219842259 usherin isoform A [Homo sapiens]                          30   1.2  
gi|122937398 dynein, cytoplasmic 2, heavy chain 1 [Homo sapiens]       30   1.2  
gi|120587029 signal peptide, CUB domain, EGF-like 1 [Homo sapiens]     30   1.2  
gi|61743978 stabilin 1 precursor [Homo sapiens]                        29   2.7  
gi|31377568 signal peptide, CUB domain, EGF-like 3 [Homo sapiens]      29   2.7  
gi|166362728 epidermal growth factor (beta-urogastrone) [Homo sa...    29   3.5  
gi|66346695 fibrillin 2 precursor [Homo sapiens]                       29   3.5  
gi|7656967 cadherin EGF LAG seven-pass G-type receptor 1 [Homo s...    29   3.5  
gi|46249414 latent transforming growth factor beta binding prote...    28   4.6  
gi|46249412 latent transforming growth factor beta binding prote...    28   4.6  
gi|4504927 keratin 36 [Homo sapiens]                                   28   4.6  
gi|56550049 uromodulin precursor [Homo sapiens]                        28   4.6  
gi|59850812 uromodulin precursor [Homo sapiens]                        28   4.6  
gi|208879446 proenkephalin [Homo sapiens]                              28   4.6  
gi|5453876 proenkephalin [Homo sapiens]                                28   4.6  
gi|223555935 dynein, axonemal, heavy polypeptide 14 isoform 1 [H...    28   6.0  
gi|10190748 CEGP1 protein [Homo sapiens]                               28   7.9  

>gi|61743938 G-protein coupled receptor 110 isoform 2 [Homo sapiens]
          Length = 218

 Score =  454 bits (1169), Expect = e-128
 Identities = 218/218 (100%), Positives = 218/218 (100%)

Query: 1   MKVGVLWLISFFTFTDGHGGFLGKNDGIKTKKELIVNKKKHLGPVEEYQLLLQVTYRDSK 60
           MKVGVLWLISFFTFTDGHGGFLGKNDGIKTKKELIVNKKKHLGPVEEYQLLLQVTYRDSK
Sbjct: 1   MKVGVLWLISFFTFTDGHGGFLGKNDGIKTKKELIVNKKKHLGPVEEYQLLLQVTYRDSK 60

Query: 61  EKRDLRNFLKLLKPPLLWSHGLIRIIRAKATTDCNSLNGVLQCTCEDSYTWFPPSCLDPQ 120
           EKRDLRNFLKLLKPPLLWSHGLIRIIRAKATTDCNSLNGVLQCTCEDSYTWFPPSCLDPQ
Sbjct: 61  EKRDLRNFLKLLKPPLLWSHGLIRIIRAKATTDCNSLNGVLQCTCEDSYTWFPPSCLDPQ 120

Query: 121 NCYLHTAGALPSCECHLNNLSQSVNFCERTKIWGTFKINERFTNDLLNSSSAIYSKYANG 180
           NCYLHTAGALPSCECHLNNLSQSVNFCERTKIWGTFKINERFTNDLLNSSSAIYSKYANG
Sbjct: 121 NCYLHTAGALPSCECHLNNLSQSVNFCERTKIWGTFKINERFTNDLLNSSSAIYSKYANG 180

Query: 181 IEIQLKKAYERIQGFESVQVTQFRMSLLSPKLECNGTI 218
           IEIQLKKAYERIQGFESVQVTQFRMSLLSPKLECNGTI
Sbjct: 181 IEIQLKKAYERIQGFESVQVTQFRMSLLSPKLECNGTI 218


>gi|61743940 G-protein coupled receptor 110 isoform 1 [Homo sapiens]
          Length = 910

 Score =  427 bits (1097), Expect = e-120
 Identities = 204/204 (100%), Positives = 204/204 (100%)

Query: 1   MKVGVLWLISFFTFTDGHGGFLGKNDGIKTKKELIVNKKKHLGPVEEYQLLLQVTYRDSK 60
           MKVGVLWLISFFTFTDGHGGFLGKNDGIKTKKELIVNKKKHLGPVEEYQLLLQVTYRDSK
Sbjct: 1   MKVGVLWLISFFTFTDGHGGFLGKNDGIKTKKELIVNKKKHLGPVEEYQLLLQVTYRDSK 60

Query: 61  EKRDLRNFLKLLKPPLLWSHGLIRIIRAKATTDCNSLNGVLQCTCEDSYTWFPPSCLDPQ 120
           EKRDLRNFLKLLKPPLLWSHGLIRIIRAKATTDCNSLNGVLQCTCEDSYTWFPPSCLDPQ
Sbjct: 61  EKRDLRNFLKLLKPPLLWSHGLIRIIRAKATTDCNSLNGVLQCTCEDSYTWFPPSCLDPQ 120

Query: 121 NCYLHTAGALPSCECHLNNLSQSVNFCERTKIWGTFKINERFTNDLLNSSSAIYSKYANG 180
           NCYLHTAGALPSCECHLNNLSQSVNFCERTKIWGTFKINERFTNDLLNSSSAIYSKYANG
Sbjct: 121 NCYLHTAGALPSCECHLNNLSQSVNFCERTKIWGTFKINERFTNDLLNSSSAIYSKYANG 180

Query: 181 IEIQLKKAYERIQGFESVQVTQFR 204
           IEIQLKKAYERIQGFESVQVTQFR
Sbjct: 181 IEIQLKKAYERIQGFESVQVTQFR 204


>gi|148719671 G-protein coupled receptor 116 [Homo sapiens]
          Length = 1346

 Score = 67.4 bits (163), Expect = 9e-12
 Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 13/168 (7%)

Query: 46  EEYQLLLQVTYRDSKEKRDLRNFLKLLKPPLLWSHG-----LIRIIRAKATTDCNSLNGV 100
           EEY + +++++ ++     ++ +L  L  P+   HG     +  I+    TT C      
Sbjct: 61  EEYTVNIEISFENASFLDPIKAYLNSLSFPI---HGNNTDQITDILSINVTTVCRPAGNE 117

Query: 101 LQCTCEDSYTWFPPSCLDPQNCYLHTAGALPSCECH-LNNLSQSVNFC---ERTKIWGTF 156
           + C+CE  Y W    CL    C       LP   C  L  L  +  FC   E   +    
Sbjct: 118 IWCSCETGYGWPRERCLHNLICQERDV-FLPGHHCSCLKELPPNGPFCLLQEDVTLNMRV 176

Query: 157 KINERFTNDLLNSSSAIYSKYANGIEIQLKKAYERIQGFESVQVTQFR 204
           ++N  F  DL+N+SSA+Y  Y   +E   +K Y  + GF+ V VT F+
Sbjct: 177 RLNVGFQEDLMNTSSALYRSYKTDLETAFRKGYGILPGFKGVTVTGFK 224


>gi|148719673 G-protein coupled receptor 116 [Homo sapiens]
          Length = 1346

 Score = 67.4 bits (163), Expect = 9e-12
 Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 13/168 (7%)

Query: 46  EEYQLLLQVTYRDSKEKRDLRNFLKLLKPPLLWSHG-----LIRIIRAKATTDCNSLNGV 100
           EEY + +++++ ++     ++ +L  L  P+   HG     +  I+    TT C      
Sbjct: 61  EEYTVNIEISFENASFLDPIKAYLNSLSFPI---HGNNTDQITDILSINVTTVCRPAGNE 117

Query: 101 LQCTCEDSYTWFPPSCLDPQNCYLHTAGALPSCECH-LNNLSQSVNFC---ERTKIWGTF 156
           + C+CE  Y W    CL    C       LP   C  L  L  +  FC   E   +    
Sbjct: 118 IWCSCETGYGWPRERCLHNLICQERDV-FLPGHHCSCLKELPPNGPFCLLQEDVTLNMRV 176

Query: 157 KINERFTNDLLNSSSAIYSKYANGIEIQLKKAYERIQGFESVQVTQFR 204
           ++N  F  DL+N+SSA+Y  Y   +E   +K Y  + GF+ V VT F+
Sbjct: 177 RLNVGFQEDLMNTSSALYRSYKTDLETAFRKGYGILPGFKGVTVTGFK 224


>gi|6631090 interphotoreceptor matrix proteoglycan 1 [Homo sapiens]
          Length = 797

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 5/60 (8%)

Query: 158 INERFTNDLLNSSSAIYSKYANGIEIQLKKAYERIQGFESVQVTQFRMSLLSPKLECNGT 217
           +N++F  +L +S S  Y + A   ++Q++K ++++ GF+ + V  FR     PK E +G+
Sbjct: 243 VNQKFKAELADSQSPYYQELAGKSQLQMQKIFKKLPGFKKIHVLGFR-----PKKEKDGS 297


>gi|190343004 EGF-containing fibulin-like extracellular matrix
           protein 2 [Homo sapiens]
          Length = 443

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 7/54 (12%)

Query: 89  KATTDCNSLNGVLQCTCEDSYTWFPPSCLDPQNCYL----HTAGALPS---CEC 135
           + + DC++L G  QCTC D Y    P C+D   C      H    LP    C+C
Sbjct: 135 RPSQDCHNLPGSYQCTCPDGYRKIGPECVDIDECRYRYCQHRCVNLPGSFRCQC 188


>gi|115430108 rho-related BTB domain containing 3 [Homo sapiens]
          Length = 611

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 14/113 (12%)

Query: 15  TDGHGGFLGKNDGIKTKKELIVNKK-----------KHLGPVEEYQLLLQVTYRDSKE-- 61
           T   G  +   +GI+  KEL                K+ G V EY ++  +  + S++  
Sbjct: 149 TSDRGSCVSTTEGIQLAKELGATYLELHSLDDFYIGKYFGGVLEYFMIQALNQKTSEKMK 208

Query: 62  KRDLRNFLKLLKPPLLWSHGLIRIIRAKATTDCNSLNGVL-QCTCEDSYTWFP 113
           KR + N    ++PP L     + +++A+A+   + LN +L  C C D   + P
Sbjct: 209 KRKMSNSFHGIRPPQLEQPEKMPVLKAEASHYNSDLNNLLFCCQCVDVVFYNP 261


>gi|41327708 crumbs homolog 1 precursor [Homo sapiens]
          Length = 1406

 Score = 31.2 bits (69), Expect = 0.71
 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 9/76 (11%)

Query: 93   DCNSLNGVLQCTCEDSYTWFPPSC-LDPQNCYLHTAGALPSCECHLNNLS------QSVN 145
            +C+       CTCE  YT    +C +D  NC  H      +C  H N  S       +  
Sbjct: 1190 NCSDRVAAYHCTCEPGYTGV--NCEVDIDNCQSHQCANGATCISHTNGYSCLCFGNFTGK 1247

Query: 146  FCERTKIWGTFKINER 161
            FC ++++  T   NE+
Sbjct: 1248 FCRQSRLPSTVCGNEK 1263


>gi|219842266 usherin isoform B [Homo sapiens]
          Length = 5202

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 12/55 (21%)

Query: 94   CNSLNGVLQCT-----------CEDSYTWFPPSCLDPQNCYLHTAGALPSCECHL 137
            CNSL G   C            C+D Y  F P     Q C  H +GAL    CHL
Sbjct: 963  CNSLTGQCVCQDASIAGQRCDQCKDHYFGFDPQTGRCQPCNCHLSGALNE-TCHL 1016


>gi|219842259 usherin isoform A [Homo sapiens]
          Length = 1546

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 12/55 (21%)

Query: 94   CNSLNGVLQCT-----------CEDSYTWFPPSCLDPQNCYLHTAGALPSCECHL 137
            CNSL G   C            C+D Y  F P     Q C  H +GAL    CHL
Sbjct: 963  CNSLTGQCVCQDASIAGQRCDQCKDHYFGFDPQTGRCQPCNCHLSGALNE-TCHL 1016


>gi|122937398 dynein, cytoplasmic 2, heavy chain 1 [Homo sapiens]
          Length = 4314

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 4/61 (6%)

Query: 130  LPSCECHLNNLSQSVNFCERTKIWGTFKINERFTNDLLNSSSAIYSKYANGIEIQLKKAY 189
            LP  E  LN L     F    ++W T +++  FT  LL SS  I  +   G++  L + Y
Sbjct: 3796 LPVLEKELNTLQPKDTF----RLWLTAEVHPNFTPILLQSSLKITYESPPGLKKNLMRTY 3851

Query: 190  E 190
            E
Sbjct: 3852 E 3852


>gi|120587029 signal peptide, CUB domain, EGF-like 1 [Homo sapiens]
          Length = 988

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 7/60 (11%)

Query: 91  TTDCNSLNGVLQCTCEDSYTWFPPSCLDPQNCYLHTAGALPSCECHLNNLSQSVNFCERT 150
           T  CN  NG  Q +CED+ T   P+C   Q   LH+ G      C +NN       C+RT
Sbjct: 203 TLTCNYGNGGCQHSCEDTDT--GPTCGCHQKYALHSDGRTCIETCAVNN-----GGCDRT 255


>gi|61743978 stabilin 1 precursor [Homo sapiens]
          Length = 2570

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 12/37 (32%), Positives = 16/37 (43%)

Query: 99   GVLQCTCEDSYTWFPPSCLDPQNCYLHTAGALPSCEC 135
            G   CTC+D Y      C +  +C +H  G     EC
Sbjct: 1478 GQRTCTCQDGYMGDGELCQEINSCLIHHGGCHIHAEC 1514


>gi|31377568 signal peptide, CUB domain, EGF-like 3 [Homo sapiens]
          Length = 993

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 9/53 (16%)

Query: 93  DCNSLNGVLQCTCEDSY--TWFPPSCLDPQNCYLHTAGALPSC-------ECH 136
           DC ++ G  +CTC D +       +CLD   C     G   SC       ECH
Sbjct: 85  DCVNIPGNYRCTCYDGFHLAHDGHNCLDVDECAEGNGGCQQSCVNMMGSYECH 137


>gi|166362728 epidermal growth factor (beta-urogastrone) [Homo
           sapiens]
          Length = 1207

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 2/46 (4%)

Query: 90  ATTDCNSLNGVLQCTCEDSYTWFPPSCLDPQNCYL--HTAGALPSC 133
           A++ C +  G   C C + Y      CLD   C L  H+ G   SC
Sbjct: 884 ASSKCINTEGGYVCRCSEGYQGDGIHCLDIDECQLGEHSCGENASC 929


>gi|66346695 fibrillin 2 precursor [Homo sapiens]
          Length = 2912

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 2/40 (5%)

Query: 85   IIRAKATTDCNSLNGVLQCTCEDSYTWFPP--SCLDPQNC 122
            I+     T C +  G  +C+C + Y   P   SC D   C
Sbjct: 1248 IMNGGCDTQCTNSEGSYECSCSEGYALMPDGRSCADIDEC 1287



 Score = 28.5 bits (62), Expect = 4.6
 Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 8/37 (21%)

Query: 94   CNSLNGVLQCTCEDSYTWFP--------PSCLDPQNC 122
            CN+L G+  C C+D Y              C DP NC
Sbjct: 1506 CNNLPGMFHCICDDGYELDRTGGNCTDIDECADPINC 1542


>gi|7656967 cadherin EGF LAG seven-pass G-type receptor 1 [Homo
            sapiens]
          Length = 3014

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 11/64 (17%)

Query: 93   DCNSLNGVLQCTCEDSY--TWFPPSCLDPQNCYLHTAG------ALPSCECHLNNLSQSV 144
            DCN  NG  QC C+++Y       +CL P +C+ H +       A   C C    + +  
Sbjct: 1977 DCNKTNG--QCQCKENYYKLLAQDTCL-PCDCFPHGSHSRTCDMATGQCACKPGVIGRQC 2033

Query: 145  NFCE 148
            N C+
Sbjct: 2034 NRCD 2037


>gi|46249414 latent transforming growth factor beta binding protein 1
            isoform LTBP-1L [Homo sapiens]
          Length = 1722

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 2/35 (5%)

Query: 90   ATTDCNSLNGVLQCTCEDSYTWFP--PSCLDPQNC 122
            A  DC++L G   C+C   YT  P    C D   C
Sbjct: 1050 ANGDCSNLEGSYMCSCHKGYTRTPDHKHCRDIDEC 1084


>gi|46249412 latent transforming growth factor beta binding protein
           1 isoform LTBP-1S [Homo sapiens]
          Length = 1396

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 2/35 (5%)

Query: 90  ATTDCNSLNGVLQCTCEDSYTWFP--PSCLDPQNC 122
           A  DC++L G   C+C   YT  P    C D   C
Sbjct: 724 ANGDCSNLEGSYMCSCHKGYTRTPDHKHCRDIDEC 758


>gi|4504927 keratin 36 [Homo sapiens]
          Length = 467

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 6/74 (8%)

Query: 128 GALPSCECHLNNLSQSVN-FCERTKIWGTFKINERFTNDLLNSSSAIYSKYANGIEIQLK 186
           G+  S ECH +    S   FCE     G+F  +E+ T   LN   A Y +    +E +  
Sbjct: 65  GSYLSSECHTSGFVGSGGWFCE-----GSFNGSEKETMQFLNDRLANYLEKVRQLERENA 119

Query: 187 KAYERIQGFESVQV 200
           +   RIQ +   Q+
Sbjct: 120 ELESRIQEWYEFQI 133


>gi|56550049 uromodulin precursor [Homo sapiens]
          Length = 640

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 3/43 (6%)

Query: 94  CNSLNGVLQCTCEDSYTWFPPSCLDPQNCYL---HTAGALPSC 133
           C     V  CTC++ +T    +C+D   C +   H   A  SC
Sbjct: 41  CTEDEAVTTCTCQEGFTGDGLTCVDLDECAIPGAHNCSANSSC 83


>gi|59850812 uromodulin precursor [Homo sapiens]
          Length = 640

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 3/43 (6%)

Query: 94  CNSLNGVLQCTCEDSYTWFPPSCLDPQNCYL---HTAGALPSC 133
           C     V  CTC++ +T    +C+D   C +   H   A  SC
Sbjct: 41  CTEDEAVTTCTCQEGFTGDGLTCVDLDECAIPGAHNCSANSSC 83


>gi|208879446 proenkephalin [Homo sapiens]
          Length = 267

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 10/68 (14%)

Query: 65  LRNFLKLLKPPLLWSHGLIRIIRAKATTDCNSLNGVLQCTCEDSYTWFPPSCLDPQNCYL 124
           +  FL L    LL   GL+  +RA+ + DC         TC  SY    P+ ++   C +
Sbjct: 1   MARFLTLCTWLLLLGPGLLATVRAECSQDC--------ATC--SYRLVRPADINFLACVM 50

Query: 125 HTAGALPS 132
              G LPS
Sbjct: 51  ECEGKLPS 58


>gi|5453876 proenkephalin [Homo sapiens]
          Length = 267

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 10/68 (14%)

Query: 65  LRNFLKLLKPPLLWSHGLIRIIRAKATTDCNSLNGVLQCTCEDSYTWFPPSCLDPQNCYL 124
           +  FL L    LL   GL+  +RA+ + DC         TC  SY    P+ ++   C +
Sbjct: 1   MARFLTLCTWLLLLGPGLLATVRAECSQDC--------ATC--SYRLVRPADINFLACVM 50

Query: 125 HTAGALPS 132
              G LPS
Sbjct: 51  ECEGKLPS 58


>gi|223555935 dynein, axonemal, heavy polypeptide 14 isoform 1 [Homo
            sapiens]
          Length = 4515

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 12/38 (31%), Positives = 23/38 (60%)

Query: 28   IKTKKELIVNKKKHLGPVEEYQLLLQVTYRDSKEKRDL 65
            +K  ++ +  K++ L  VEE+ L LQ  Y+D+  ++ L
Sbjct: 3132 LKIARQRLAEKQRGLQLVEEHLLFLQAAYKDTVAEKQL 3169


>gi|10190748 CEGP1 protein [Homo sapiens]
          Length = 999

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 93  DCNSLNGVLQCTCEDSYTWFPP--SCLDPQNCYLHTAGALPSC 133
           DC ++ G  +CTC D +       +CLD   C  +  G   +C
Sbjct: 101 DCLNIPGNYRCTCFDGFMLAHDGHNCLDVDECLENNGGCQHTC 143


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.137    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,551,200
Number of Sequences: 37866
Number of extensions: 368961
Number of successful extensions: 884
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 854
Number of HSP's gapped (non-prelim): 46
length of query: 218
length of database: 18,247,518
effective HSP length: 98
effective length of query: 120
effective length of database: 14,536,650
effective search space: 1744398000
effective search space used: 1744398000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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