Guide to the Human Genome
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Name: GPR110 Sequence: fasta or formatted (218aa) NCBI GI: 61743938
Description:

G-protein coupled receptor 110 isoform 2

Referenced in:

G-Protein-coupled Receptors

Other entries for this name:
alt prot [910aa] G-protein coupled receptor 110 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.2          7           1
 C cysteine            4.1          9           1
 D aspartate           3.7          8           1
 E glutamate           5.5         12           2
 F phenylalanine       5.0         11           2
 G glycine             6.4         14           2
 H histidine           2.3          5           1
 I isoleucine          6.0         13           2
 K lysine              8.7         19           3
 L leucine            12.8         28           3
 M methionine          0.9          2           1
 N asparagine          6.4         14           2
 P proline             3.7          8           2
 Q glutamine           4.1          9           1
 R arginine            4.1          9           1
 S serine              7.3         16           3
 T threonine           6.4         14           2
 V valine              4.1          9           1
 W tryptophan          1.8          4           1
 Y tyrosine            3.2          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G-protein coupled receptor 110 isoform 2 
GPR110                0.937   G-protein coupled receptor 110 isoform 1 
GPR116                0.098   G-protein coupled receptor 116 
GPR116                0.098   G-protein coupled receptor 116 
IMPG1                 0.033   interphotoreceptor matrix proteoglycan 1 
EFEMP2                0.030   EGF-containing fibulin-like extracellular matrix pr...
RHOBTB3               0.016   rho-related BTB domain containing 3 
CRB1                  0.014   crumbs homolog 1 precursor 
USH2A                 0.012   usherin isoform B 
USH2A                 0.012   usherin isoform A 
DYNC2H1               0.012   dynein, cytoplasmic 2, heavy chain 1 
SCUBE1                0.012   signal peptide, CUB domain, EGF-like 1 
STAB1                 0.009   stabilin 1 precursor 
SCUBE3                0.009   signal peptide, CUB domain, EGF-like 3 
EGF                   0.009   epidermal growth factor (beta-urogastrone) 
FBN2                  0.009   fibrillin 2 precursor 
CELSR1                0.009   cadherin EGF LAG seven-pass G-type receptor 1 
LTBP1                 0.007   latent transforming growth factor beta binding prote...
LTBP1                 0.007   latent transforming growth factor beta binding prote...
KRT36                 0.007   keratin 36 
UMOD                  0.007   uromodulin precursor 
UMOD                  0.007   uromodulin precursor 
PENK                  0.007   proenkephalin 
PENK                  0.007   proenkephalin 
DNAH14                0.007   dynein, axonemal, heavy polypeptide 14 isoform 1 [H...
SCUBE2                0.007   CEGP1 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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