Guide to the Human Genome
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Name: RHOBTB3 Sequence: fasta or formatted (611aa) NCBI GI: 115430108
Description:

rho-related BTB domain containing 3

Referenced in:

Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         37           2
 C cysteine            3.8         23           2
 D aspartate           4.9         30           2
 E glutamate           5.6         34           2
 F phenylalanine       5.4         33           2
 G glycine             4.1         25           2
 H histidine           2.8         17           2
 I isoleucine          6.5         40           2
 K lysine              6.5         40           2
 L leucine            10.3         63           3
 M methionine          2.6         16           1
 N asparagine          4.9         30           2
 P proline             4.3         26           2
 Q glutamine           3.6         22           1
 R arginine            4.3         26           1
 S serine              8.0         49           2
 T threonine           4.3         26           2
 V valine              7.4         45           2
 W tryptophan          1.0          6           1
 Y tyrosine            3.8         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   rho-related BTB domain containing 3 
RHOBTB1               0.084   Rho-related BTB domain containing 1 
RHOBTB2               0.062   Rho-related BTB domain containing 2 isoform 3 [Homo...
RHOBTB2               0.062   Rho-related BTB domain containing 2 isoform 2 [Homo...
RHOBTB2               0.062   Rho-related BTB domain containing 2 isoform 1 [Homo...
KLHL22                0.030   kelch-like 
KLHL24                0.027   DRE1 protein 
RCBTB1                0.026   regulator of chromosome condensation (RCC1) and BTB ...
IPP                   0.025   intracisternal A particle-promoted polypeptide isofor...
IPP                   0.025   intracisternal A particle-promoted polypeptide isof...
BTBD1                 0.024   BTB (POZ) domain containing 1 isoform 2 
BTBD1                 0.024   BTB (POZ) domain containing 1 isoform 1 
BTBD2                 0.024   BTB (POZ) domain containing 2 
KLHL4                 0.023   kelch-like 4 isoform 2 
KLHL4                 0.023   kelch-like 4 isoform 1 
SPOP                  0.021   speckle-type POZ protein 
SPOP                  0.021   speckle-type POZ protein 
SPOP                  0.021   speckle-type POZ protein 
SPOP                  0.021   speckle-type POZ protein 
SPOP                  0.021   speckle-type POZ protein 
SPOP                  0.021   speckle-type POZ protein 
RCBTB2                0.021   regulator of chromosome condensation and BTB domain c...
KLHL5                 0.021   kelch-like 5 isoform 3 
KLHL5                 0.021   kelch-like 5 isoform 1 
BTBD12                0.021   BTB (POZ) domain containing 12 
SPOPL                 0.020   speckle-type POZ protein-like 
KLHL6                 0.020   kelch-like 6 
KLHL7                 0.020   kelch-like 7 isoform 2 
BTBD6                 0.020   BTB domain protein BDPL 
BTBD9                 0.019   BTB (POZ) domain containing 9 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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