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Search of human proteins with 61742827
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|61742827 disrupted in schizophrenia 1 isoform Es [Homo
sapiens]
(369 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|61742827 disrupted in schizophrenia 1 isoform Es [Homo sapiens] 766 0.0
gi|61742829 disrupted in schizophrenia 1 isoform S [Homo sapiens] 720 0.0
gi|61742825 disrupted in schizophrenia 1 isoform Lv [Homo sapiens] 720 0.0
gi|61742823 disrupted in schizophrenia 1 isoform L [Homo sapiens] 720 0.0
gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f... 38 0.013
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e... 38 0.013
gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d... 38 0.013
gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b ... 38 0.013
gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ... 38 0.013
gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c ... 38 0.013
gi|160707881 formin 2 [Homo sapiens] 38 0.017
gi|239755824 PREDICTED: hypothetical protein [Homo sapiens] 37 0.022
gi|239750321 PREDICTED: hypothetical protein [Homo sapiens] 37 0.022
gi|239744627 PREDICTED: hypothetical protein [Homo sapiens] 37 0.022
gi|239753060 PREDICTED: similar to hCG1739112 [Homo sapiens] 36 0.063
gi|239747612 PREDICTED: hypothetical protein XP_002347909 [Homo ... 36 0.063
gi|169206489 PREDICTED: hypothetical protein [Homo sapiens] 35 0.082
gi|169205942 PREDICTED: hypothetical protein [Homo sapiens] 35 0.082
gi|12707580 paired-like homeobox 2b [Homo sapiens] 35 0.082
gi|28559039 mediator complex subunit 1 [Homo sapiens] 35 0.11
gi|11138123 cholinergic receptor, nicotinic, alpha 10 [Homo sapi... 35 0.14
gi|145699105 connexin40.1 [Homo sapiens] 35 0.14
gi|188536004 zinc finger protein 469 [Homo sapiens] 34 0.24
gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo sapi... 33 0.41
gi|122692281 hypothetical protein LOC645369 [Homo sapiens] 33 0.41
gi|38158015 mastermind-like 3 [Homo sapiens] 33 0.41
gi|112821681 G protein-regulated inducer of neurite outgrowth 1 ... 33 0.41
gi|67089160 promyelocytic leukemia protein isoform 11 [Homo sapi... 33 0.53
gi|15451765 promyelocytic leukemia protein isoform 9 [Homo sapiens] 33 0.53
gi|45827771 autoantigen RCD8 [Homo sapiens] 33 0.53
>gi|61742827 disrupted in schizophrenia 1 isoform Es [Homo sapiens]
Length = 369
Score = 766 bits (1977), Expect = 0.0
Identities = 369/369 (100%), Positives = 369/369 (100%)
Query: 1 MPGGGPQGAPAAAGGGGVSHRAGSRDCLPPAACFRRRRLARRPGYMRSSTGPGIGFLSPA 60
MPGGGPQGAPAAAGGGGVSHRAGSRDCLPPAACFRRRRLARRPGYMRSSTGPGIGFLSPA
Sbjct: 1 MPGGGPQGAPAAAGGGGVSHRAGSRDCLPPAACFRRRRLARRPGYMRSSTGPGIGFLSPA 60
Query: 61 VGTLFRFPGGVSGEESHHSESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSAHFGI 120
VGTLFRFPGGVSGEESHHSESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSAHFGI
Sbjct: 61 VGTLFRFPGGVSGEESHHSESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSAHFGI 120
Query: 121 QLRGGTRLPDRLSWPCGPGSAGWQQEFAAMDSSETLDASWEAACSDGARRVRAAGSLPSA 180
QLRGGTRLPDRLSWPCGPGSAGWQQEFAAMDSSETLDASWEAACSDGARRVRAAGSLPSA
Sbjct: 121 QLRGGTRLPDRLSWPCGPGSAGWQQEFAAMDSSETLDASWEAACSDGARRVRAAGSLPSA 180
Query: 181 ELSSNSCSPGCGPEVPPTPPGSHSAFTSSFSFIRLSLGSAGERGEAEGCPPSREAESHCQ 240
ELSSNSCSPGCGPEVPPTPPGSHSAFTSSFSFIRLSLGSAGERGEAEGCPPSREAESHCQ
Sbjct: 181 ELSSNSCSPGCGPEVPPTPPGSHSAFTSSFSFIRLSLGSAGERGEAEGCPPSREAESHCQ 240
Query: 241 SPQEMGAKAASLDGPHEDPRCLSRPFSLLATRVSADLAQAARNSSRPERDMHSLPDMDPG 300
SPQEMGAKAASLDGPHEDPRCLSRPFSLLATRVSADLAQAARNSSRPERDMHSLPDMDPG
Sbjct: 241 SPQEMGAKAASLDGPHEDPRCLSRPFSLLATRVSADLAQAARNSSRPERDMHSLPDMDPG 300
Query: 301 SSSSLDPSLAGCGGDGSSGSGDAHSWDTLLRKWEPVLRDCLLRNRRQMELEPIALDPPWK 360
SSSSLDPSLAGCGGDGSSGSGDAHSWDTLLRKWEPVLRDCLLRNRRQMELEPIALDPPWK
Sbjct: 301 SSSSLDPSLAGCGGDGSSGSGDAHSWDTLLRKWEPVLRDCLLRNRRQMELEPIALDPPWK 360
Query: 361 PRHPEPNSY 369
PRHPEPNSY
Sbjct: 361 PRHPEPNSY 369
>gi|61742829 disrupted in schizophrenia 1 isoform S [Homo sapiens]
Length = 678
Score = 720 bits (1859), Expect = 0.0
Identities = 350/355 (98%), Positives = 352/355 (99%)
Query: 1 MPGGGPQGAPAAAGGGGVSHRAGSRDCLPPAACFRRRRLARRPGYMRSSTGPGIGFLSPA 60
MPGGGPQGAPAAAGGGGVSHRAGSRDCLPPAACFRRRRLARRPGYMRSSTGPGIGFLSPA
Sbjct: 1 MPGGGPQGAPAAAGGGGVSHRAGSRDCLPPAACFRRRRLARRPGYMRSSTGPGIGFLSPA 60
Query: 61 VGTLFRFPGGVSGEESHHSESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSAHFGI 120
VGTLFRFPGGVSGEESHHSESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSAHFGI
Sbjct: 61 VGTLFRFPGGVSGEESHHSESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSAHFGI 120
Query: 121 QLRGGTRLPDRLSWPCGPGSAGWQQEFAAMDSSETLDASWEAACSDGARRVRAAGSLPSA 180
QLRGGTRLPDRLSWPCGPGSAGWQQEFAAMDSSETLDASWEAACSDGARRVRAAGSLPSA
Sbjct: 121 QLRGGTRLPDRLSWPCGPGSAGWQQEFAAMDSSETLDASWEAACSDGARRVRAAGSLPSA 180
Query: 181 ELSSNSCSPGCGPEVPPTPPGSHSAFTSSFSFIRLSLGSAGERGEAEGCPPSREAESHCQ 240
ELSSNSCSPGCGPEVPPTPPGSHSAFTSSFSFIRLSLGSAGERGEAEGCPPSREAESHCQ
Sbjct: 181 ELSSNSCSPGCGPEVPPTPPGSHSAFTSSFSFIRLSLGSAGERGEAEGCPPSREAESHCQ 240
Query: 241 SPQEMGAKAASLDGPHEDPRCLSRPFSLLATRVSADLAQAARNSSRPERDMHSLPDMDPG 300
SPQEMGAKAASLDGPHEDPRCLSRPFSLLATRVSADLAQAARNSSRPERDMHSLPDMDPG
Sbjct: 241 SPQEMGAKAASLDGPHEDPRCLSRPFSLLATRVSADLAQAARNSSRPERDMHSLPDMDPG 300
Query: 301 SSSSLDPSLAGCGGDGSSGSGDAHSWDTLLRKWEPVLRDCLLRNRRQMELEPIAL 355
SSSSLDPSLAGCGGDGSSGSGDAHSWDTLLRKWEPVLRDCLLRNRRQME+ + L
Sbjct: 301 SSSSLDPSLAGCGGDGSSGSGDAHSWDTLLRKWEPVLRDCLLRNRRQMEVISLRL 355
>gi|61742825 disrupted in schizophrenia 1 isoform Lv [Homo sapiens]
Length = 832
Score = 720 bits (1859), Expect = 0.0
Identities = 350/355 (98%), Positives = 352/355 (99%)
Query: 1 MPGGGPQGAPAAAGGGGVSHRAGSRDCLPPAACFRRRRLARRPGYMRSSTGPGIGFLSPA 60
MPGGGPQGAPAAAGGGGVSHRAGSRDCLPPAACFRRRRLARRPGYMRSSTGPGIGFLSPA
Sbjct: 1 MPGGGPQGAPAAAGGGGVSHRAGSRDCLPPAACFRRRRLARRPGYMRSSTGPGIGFLSPA 60
Query: 61 VGTLFRFPGGVSGEESHHSESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSAHFGI 120
VGTLFRFPGGVSGEESHHSESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSAHFGI
Sbjct: 61 VGTLFRFPGGVSGEESHHSESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSAHFGI 120
Query: 121 QLRGGTRLPDRLSWPCGPGSAGWQQEFAAMDSSETLDASWEAACSDGARRVRAAGSLPSA 180
QLRGGTRLPDRLSWPCGPGSAGWQQEFAAMDSSETLDASWEAACSDGARRVRAAGSLPSA
Sbjct: 121 QLRGGTRLPDRLSWPCGPGSAGWQQEFAAMDSSETLDASWEAACSDGARRVRAAGSLPSA 180
Query: 181 ELSSNSCSPGCGPEVPPTPPGSHSAFTSSFSFIRLSLGSAGERGEAEGCPPSREAESHCQ 240
ELSSNSCSPGCGPEVPPTPPGSHSAFTSSFSFIRLSLGSAGERGEAEGCPPSREAESHCQ
Sbjct: 181 ELSSNSCSPGCGPEVPPTPPGSHSAFTSSFSFIRLSLGSAGERGEAEGCPPSREAESHCQ 240
Query: 241 SPQEMGAKAASLDGPHEDPRCLSRPFSLLATRVSADLAQAARNSSRPERDMHSLPDMDPG 300
SPQEMGAKAASLDGPHEDPRCLSRPFSLLATRVSADLAQAARNSSRPERDMHSLPDMDPG
Sbjct: 241 SPQEMGAKAASLDGPHEDPRCLSRPFSLLATRVSADLAQAARNSSRPERDMHSLPDMDPG 300
Query: 301 SSSSLDPSLAGCGGDGSSGSGDAHSWDTLLRKWEPVLRDCLLRNRRQMELEPIAL 355
SSSSLDPSLAGCGGDGSSGSGDAHSWDTLLRKWEPVLRDCLLRNRRQME+ + L
Sbjct: 301 SSSSLDPSLAGCGGDGSSGSGDAHSWDTLLRKWEPVLRDCLLRNRRQMEVISLRL 355
>gi|61742823 disrupted in schizophrenia 1 isoform L [Homo sapiens]
Length = 854
Score = 720 bits (1859), Expect = 0.0
Identities = 350/355 (98%), Positives = 352/355 (99%)
Query: 1 MPGGGPQGAPAAAGGGGVSHRAGSRDCLPPAACFRRRRLARRPGYMRSSTGPGIGFLSPA 60
MPGGGPQGAPAAAGGGGVSHRAGSRDCLPPAACFRRRRLARRPGYMRSSTGPGIGFLSPA
Sbjct: 1 MPGGGPQGAPAAAGGGGVSHRAGSRDCLPPAACFRRRRLARRPGYMRSSTGPGIGFLSPA 60
Query: 61 VGTLFRFPGGVSGEESHHSESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSAHFGI 120
VGTLFRFPGGVSGEESHHSESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSAHFGI
Sbjct: 61 VGTLFRFPGGVSGEESHHSESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSAHFGI 120
Query: 121 QLRGGTRLPDRLSWPCGPGSAGWQQEFAAMDSSETLDASWEAACSDGARRVRAAGSLPSA 180
QLRGGTRLPDRLSWPCGPGSAGWQQEFAAMDSSETLDASWEAACSDGARRVRAAGSLPSA
Sbjct: 121 QLRGGTRLPDRLSWPCGPGSAGWQQEFAAMDSSETLDASWEAACSDGARRVRAAGSLPSA 180
Query: 181 ELSSNSCSPGCGPEVPPTPPGSHSAFTSSFSFIRLSLGSAGERGEAEGCPPSREAESHCQ 240
ELSSNSCSPGCGPEVPPTPPGSHSAFTSSFSFIRLSLGSAGERGEAEGCPPSREAESHCQ
Sbjct: 181 ELSSNSCSPGCGPEVPPTPPGSHSAFTSSFSFIRLSLGSAGERGEAEGCPPSREAESHCQ 240
Query: 241 SPQEMGAKAASLDGPHEDPRCLSRPFSLLATRVSADLAQAARNSSRPERDMHSLPDMDPG 300
SPQEMGAKAASLDGPHEDPRCLSRPFSLLATRVSADLAQAARNSSRPERDMHSLPDMDPG
Sbjct: 241 SPQEMGAKAASLDGPHEDPRCLSRPFSLLATRVSADLAQAARNSSRPERDMHSLPDMDPG 300
Query: 301 SSSSLDPSLAGCGGDGSSGSGDAHSWDTLLRKWEPVLRDCLLRNRRQMELEPIAL 355
SSSSLDPSLAGCGGDGSSGSGDAHSWDTLLRKWEPVLRDCLLRNRRQME+ + L
Sbjct: 301 SSSSLDPSLAGCGGDGSSGSGDAHSWDTLLRKWEPVLRDCLLRNRRQMEVISLRL 355
>gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f
[Homo sapiens]
Length = 1412
Score = 38.1 bits (87), Expect = 0.013
Identities = 36/138 (26%), Positives = 51/138 (36%), Gaps = 15/138 (10%)
Query: 72 SGEESHHSESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSAHFGIQLRGGTRLPDR 131
S EES E Q + +P ++A+AP S R +G P R
Sbjct: 336 SSEESDSEEEAPAQAKPSGK-----APQVRAASAPAKESPR----------KGAAPAPPR 380
Query: 132 LSWPCGPGSAGWQQEFAAMDSSETLDASWEAACSDGARRVRAAGSLPSAELSSNSCSPGC 191
+ P +QE + SSE D+ EA + A +V+ G P + +S
Sbjct: 381 KTGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQVKPLGKSPQVKPASTMGMGPL 440
Query: 192 GPEVPPTPPGSHSAFTSS 209
G P PPG T S
Sbjct: 441 GKGAGPVPPGKVGPATPS 458
>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
[Homo sapiens]
Length = 1451
Score = 38.1 bits (87), Expect = 0.013
Identities = 36/138 (26%), Positives = 51/138 (36%), Gaps = 15/138 (10%)
Query: 72 SGEESHHSESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSAHFGIQLRGGTRLPDR 131
S EES E Q + +P ++A+AP S R +G P R
Sbjct: 413 SSEESDSEEEAPAQAKPSGK-----APQVRAASAPAKESPR----------KGAAPAPPR 457
Query: 132 LSWPCGPGSAGWQQEFAAMDSSETLDASWEAACSDGARRVRAAGSLPSAELSSNSCSPGC 191
+ P +QE + SSE D+ EA + A +V+ G P + +S
Sbjct: 458 KTGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQVKPLGKSPQVKPASTMGMGPL 517
Query: 192 GPEVPPTPPGSHSAFTSS 209
G P PPG T S
Sbjct: 518 GKGAGPVPPGKVGPATPS 535
Score = 30.0 bits (66), Expect = 3.5
Identities = 38/182 (20%), Positives = 68/182 (37%), Gaps = 5/182 (2%)
Query: 80 ESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSAHF-GIQLRGGTRLPD-RLSWPCG 137
ES + + G +S S+ A+ + VR SA G +G T P +
Sbjct: 269 ESESSEEGSESEEEAPAGTRSQVKASEKILQVRAASAPAKGTPGKGATPAPPGKAGAVAS 328
Query: 138 PGSAGWQQEFAAMDSSETLDASWEAACSDGARRVRAAGSLPSAELSSNSCSPGCGPEVPP 197
AG +E + S E+ D+ E + + +A+G +S P
Sbjct: 329 QTKAGKPEEDSESSSEESSDSEEETPAAKALLQAKASGKTSQVGAASAPAKESPRKGAAP 388
Query: 198 TPPGSHSAFTSSFSFIRL--SLGSAGERGEAEGCPPSREAESHCQSPQEMGAKAASLDGP 255
PPG + + S+ E ++E P+ +A+ ++PQ A A + + P
Sbjct: 389 APPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPA-QAKPSGKAPQVRAASAPAKESP 447
Query: 256 HE 257
+
Sbjct: 448 RK 449
>gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d
[Homo sapiens]
Length = 1488
Score = 38.1 bits (87), Expect = 0.013
Identities = 36/138 (26%), Positives = 51/138 (36%), Gaps = 15/138 (10%)
Query: 72 SGEESHHSESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSAHFGIQLRGGTRLPDR 131
S EES E Q + +P ++A+AP S R +G P R
Sbjct: 413 SSEESDSEEEAPAQAKPSGK-----APQVRAASAPAKESPR----------KGAAPAPPR 457
Query: 132 LSWPCGPGSAGWQQEFAAMDSSETLDASWEAACSDGARRVRAAGSLPSAELSSNSCSPGC 191
+ P +QE + SSE D+ EA + A +V+ G P + +S
Sbjct: 458 KTGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQVKPLGKSPQVKPASTMGMGPL 517
Query: 192 GPEVPPTPPGSHSAFTSS 209
G P PPG T S
Sbjct: 518 GKGAGPVPPGKVGPATPS 535
Score = 30.0 bits (66), Expect = 3.5
Identities = 38/182 (20%), Positives = 68/182 (37%), Gaps = 5/182 (2%)
Query: 80 ESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSAHF-GIQLRGGTRLPD-RLSWPCG 137
ES + + G +S S+ A+ + VR SA G +G T P +
Sbjct: 269 ESESSEEGSESEEEAPAGTRSQVKASEKILQVRAASAPAKGTPGKGATPAPPGKAGAVAS 328
Query: 138 PGSAGWQQEFAAMDSSETLDASWEAACSDGARRVRAAGSLPSAELSSNSCSPGCGPEVPP 197
AG +E + S E+ D+ E + + +A+G +S P
Sbjct: 329 QTKAGKPEEDSESSSEESSDSEEETPAAKALLQAKASGKTSQVGAASAPAKESPRKGAAP 388
Query: 198 TPPGSHSAFTSSFSFIRL--SLGSAGERGEAEGCPPSREAESHCQSPQEMGAKAASLDGP 255
PPG + + S+ E ++E P+ +A+ ++PQ A A + + P
Sbjct: 389 APPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPA-QAKPSGKAPQVRAASAPAKESP 447
Query: 256 HE 257
+
Sbjct: 448 RK 449
>gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b
[Homo sapiens]
Length = 1411
Score = 38.1 bits (87), Expect = 0.013
Identities = 36/138 (26%), Positives = 51/138 (36%), Gaps = 15/138 (10%)
Query: 72 SGEESHHSESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSAHFGIQLRGGTRLPDR 131
S EES E Q + +P ++A+AP S R +G P R
Sbjct: 336 SSEESDSEEEAPAQAKPSGK-----APQVRAASAPAKESPR----------KGAAPAPPR 380
Query: 132 LSWPCGPGSAGWQQEFAAMDSSETLDASWEAACSDGARRVRAAGSLPSAELSSNSCSPGC 191
+ P +QE + SSE D+ EA + A +V+ G P + +S
Sbjct: 381 KTGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQVKPLGKSPQVKPASTMGMGPL 440
Query: 192 GPEVPPTPPGSHSAFTSS 209
G P PPG T S
Sbjct: 441 GKGAGPVPPGKVGPATPS 458
>gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a
[Homo sapiens]
Length = 1450
Score = 38.1 bits (87), Expect = 0.013
Identities = 36/138 (26%), Positives = 51/138 (36%), Gaps = 15/138 (10%)
Query: 72 SGEESHHSESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSAHFGIQLRGGTRLPDR 131
S EES E Q + +P ++A+AP S R +G P R
Sbjct: 413 SSEESDSEEEAPAQAKPSGK-----APQVRAASAPAKESPR----------KGAAPAPPR 457
Query: 132 LSWPCGPGSAGWQQEFAAMDSSETLDASWEAACSDGARRVRAAGSLPSAELSSNSCSPGC 191
+ P +QE + SSE D+ EA + A +V+ G P + +S
Sbjct: 458 KTGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQVKPLGKSPQVKPASTMGMGPL 517
Query: 192 GPEVPPTPPGSHSAFTSS 209
G P PPG T S
Sbjct: 518 GKGAGPVPPGKVGPATPS 535
Score = 30.0 bits (66), Expect = 3.5
Identities = 38/182 (20%), Positives = 68/182 (37%), Gaps = 5/182 (2%)
Query: 80 ESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSAHF-GIQLRGGTRLPD-RLSWPCG 137
ES + + G +S S+ A+ + VR SA G +G T P +
Sbjct: 269 ESESSEEGSESEEEAPAGTRSQVKASEKILQVRAASAPAKGTPGKGATPAPPGKAGAVAS 328
Query: 138 PGSAGWQQEFAAMDSSETLDASWEAACSDGARRVRAAGSLPSAELSSNSCSPGCGPEVPP 197
AG +E + S E+ D+ E + + +A+G +S P
Sbjct: 329 QTKAGKPEEDSESSSEESSDSEEETPAAKALLQAKASGKTSQVGAASAPAKESPRKGAAP 388
Query: 198 TPPGSHSAFTSSFSFIRL--SLGSAGERGEAEGCPPSREAESHCQSPQEMGAKAASLDGP 255
PPG + + S+ E ++E P+ +A+ ++PQ A A + + P
Sbjct: 389 APPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPA-QAKPSGKAPQVRAASAPAKESP 447
Query: 256 HE 257
+
Sbjct: 448 RK 449
>gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c
[Homo sapiens]
Length = 958
Score = 38.1 bits (87), Expect = 0.013
Identities = 36/138 (26%), Positives = 51/138 (36%), Gaps = 15/138 (10%)
Query: 72 SGEESHHSESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSAHFGIQLRGGTRLPDR 131
S EES E Q + +P ++A+AP S R +G P R
Sbjct: 413 SSEESDSEEEAPAQAKPSGK-----APQVRAASAPAKESPR----------KGAAPAPPR 457
Query: 132 LSWPCGPGSAGWQQEFAAMDSSETLDASWEAACSDGARRVRAAGSLPSAELSSNSCSPGC 191
+ P +QE + SSE D+ EA + A +V+ G P + +S
Sbjct: 458 KTGPAAAQVQVGKQEEDSRSSSEESDSDREALAAMNAAQVKPLGKSPQVKPASTMGMGPL 517
Query: 192 GPEVPPTPPGSHSAFTSS 209
G P PPG T S
Sbjct: 518 GKGAGPVPPGKVGPATPS 535
Score = 30.0 bits (66), Expect = 3.5
Identities = 38/182 (20%), Positives = 68/182 (37%), Gaps = 5/182 (2%)
Query: 80 ESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSAHF-GIQLRGGTRLPD-RLSWPCG 137
ES + + G +S S+ A+ + VR SA G +G T P +
Sbjct: 269 ESESSEEGSESEEEAPAGTRSQVKASEKILQVRAASAPAKGTPGKGATPAPPGKAGAVAS 328
Query: 138 PGSAGWQQEFAAMDSSETLDASWEAACSDGARRVRAAGSLPSAELSSNSCSPGCGPEVPP 197
AG +E + S E+ D+ E + + +A+G +S P
Sbjct: 329 QTKAGKPEEDSESSSEESSDSEEETPAAKALLQAKASGKTSQVGAASAPAKESPRKGAAP 388
Query: 198 TPPGSHSAFTSSFSFIRL--SLGSAGERGEAEGCPPSREAESHCQSPQEMGAKAASLDGP 255
PPG + + S+ E ++E P+ +A+ ++PQ A A + + P
Sbjct: 389 APPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPA-QAKPSGKAPQVRAASAPAKESP 447
Query: 256 HE 257
+
Sbjct: 448 RK 449
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 37.7 bits (86), Expect = 0.017
Identities = 40/133 (30%), Positives = 52/133 (39%), Gaps = 8/133 (6%)
Query: 192 GPEVPPTPPGSHSAFTSSFSFI-RLSLGSAGERGEAEGCPPSREAESHCQSPQEMGAKAA 250
G E P PP + S +F + R LG +G GEA G P + +A S E + AA
Sbjct: 228 GAEEPAAPPTAVSPQPGAFLGLDRFLLGPSGGAGEAPGSPDTEQALSALSDLPE--SLAA 285
Query: 251 SLDGPHEDPRCLSRPFSLLATRVSADLAQAARNSSRPERDMHSLPDMDPGSSSSLDPSLA 310
P + P P S S AQ A S P P+ PG ++ P +
Sbjct: 286 EPREPQQPPSPGGLPVS---EAPSLPAAQPAAKDS-PSSTAFPFPEAGPGEEAAGAP-VR 340
Query: 311 GCGGDGSSGSGDA 323
G G G DA
Sbjct: 341 GAGDTDEEGEEDA 353
Score = 32.3 bits (72), Expect = 0.70
Identities = 50/195 (25%), Positives = 68/195 (34%), Gaps = 28/195 (14%)
Query: 138 PGSAGWQQEFAAM-DSSETLDASW---EAACSDGARRVRAAGSLPSAELSSNSCSPGCGP 193
PGS +Q +A+ D E+L A + S G V A SLP+A+ ++
Sbjct: 264 PGSPDTEQALSALSDLPESLAAEPREPQQPPSPGGLPVSEAPSLPAAQPAAKDSPSSTAF 323
Query: 194 EVPPTPPGSHSAFT------------SSFSFIRLSLGSAGER-----GEAEGCPPSREAE 236
P PG +A +F GS GE GE E E
Sbjct: 324 PFPEAGPGEEAAGAPVRGAGDTDEEGEEDAFEDAPRGSPGEEWAPEVGEDAPQRLGEEPE 383
Query: 237 SHCQSPQEMGAKAASLDG-PHEDPRCLSRPFSLLATRVSADLAQAARNSSRPERDMHSLP 295
Q P AASL G P RC +P+ L+ + R S P P
Sbjct: 384 EEAQGPD--APAAASLPGSPAPSQRCF-KPYPLI---TPCYIKTTTRQLSSPNHSPSQSP 437
Query: 296 DMDPGSSSSLDPSLA 310
+ P +PSL+
Sbjct: 438 NQSPRIKRRPEPSLS 452
Score = 30.8 bits (68), Expect = 2.0
Identities = 20/72 (27%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
Query: 129 PDRLSWPCGPGSAGWQQEFAAMDSSETLDASWEAACSDGARRVRAAGSLPSAELSSNSCS 188
P L W G G G Q + +T ++ + + + LP E S+S
Sbjct: 813 PPSLLWSAGQGQPGSQPPHSISTEFQTSHEHSVSSAFKNSCNIPSPPPLPCTE--SSSSM 870
Query: 189 PGCGPEVPPTPP 200
PG G PP PP
Sbjct: 871 PGLGMVPPPPPP 882
>gi|239755824 PREDICTED: hypothetical protein [Homo sapiens]
Length = 194
Score = 37.4 bits (85), Expect = 0.022
Identities = 35/121 (28%), Positives = 47/121 (38%), Gaps = 14/121 (11%)
Query: 2 PGGGPQGAPAAAGGGGVSHRAGSRDCLPPAACFRRRRLARRPGYMRSSTGPGIGFLSPAV 61
PGG G AA GG H G P+AC R A RPG + G L A
Sbjct: 63 PGGQAPGPHAAPEAGGAGH--GDPGTRAPSACIDAGRAADRPGAV-------AGRLDRAQ 113
Query: 62 GTLFRFPGGVSGEE-----SHHSESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSA 116
G + GG SGE ++A + + + +S+S A P S G+ +
Sbjct: 114 GPVVGGEGGASGEAHAVRGERKDRTQALRTTVAACASRATRVISQSEAPPPPRSRFGSRS 173
Query: 117 H 117
H
Sbjct: 174 H 174
>gi|239750321 PREDICTED: hypothetical protein [Homo sapiens]
Length = 194
Score = 37.4 bits (85), Expect = 0.022
Identities = 35/121 (28%), Positives = 47/121 (38%), Gaps = 14/121 (11%)
Query: 2 PGGGPQGAPAAAGGGGVSHRAGSRDCLPPAACFRRRRLARRPGYMRSSTGPGIGFLSPAV 61
PGG G AA GG H G P+AC R A RPG + G L A
Sbjct: 63 PGGQAPGPHAAPEAGGAGH--GDPGTRAPSACIDAGRAADRPGAV-------AGRLDRAQ 113
Query: 62 GTLFRFPGGVSGEE-----SHHSESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSA 116
G + GG SGE ++A + + + +S+S A P S G+ +
Sbjct: 114 GPVVGGEGGASGEAHAVRGERKDRTQALRTTVAACASRATRVISQSEAPPPPRSRFGSRS 173
Query: 117 H 117
H
Sbjct: 174 H 174
>gi|239744627 PREDICTED: hypothetical protein [Homo sapiens]
Length = 194
Score = 37.4 bits (85), Expect = 0.022
Identities = 35/121 (28%), Positives = 47/121 (38%), Gaps = 14/121 (11%)
Query: 2 PGGGPQGAPAAAGGGGVSHRAGSRDCLPPAACFRRRRLARRPGYMRSSTGPGIGFLSPAV 61
PGG G AA GG H G P+AC R A RPG + G L A
Sbjct: 63 PGGQAPGPHAAPEAGGAGH--GDPGTRAPSACIDAGRAADRPGAV-------AGRLDRAQ 113
Query: 62 GTLFRFPGGVSGEE-----SHHSESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSA 116
G + GG SGE ++A + + + +S+S A P S G+ +
Sbjct: 114 GPVVGGEGGASGEAHAVRGERKDRTQALRTTVAACASRATRVISQSEAPPPPRSRFGSRS 173
Query: 117 H 117
H
Sbjct: 174 H 174
>gi|239753060 PREDICTED: similar to hCG1739112 [Homo sapiens]
Length = 211
Score = 35.8 bits (81), Expect = 0.063
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Query: 170 RVRAAGSLPSAELSSNSCSPGCGPEVPPTPPGSHSAFTSSFSFIRLSLGSAGERGEAEGC 229
R+ AA + S+ LS+ S P + P G+HS+ + S G +G R +
Sbjct: 85 RLTAASRVQSSCLSAASAGPAPACQWPLQAHGAHSSQRPFQAQFFPSGGLSGPRTSS--- 141
Query: 230 PPSREAESHCQSPQEMGAKAASLDGPHEDPRCLSRPFSLLAT 271
SR ++H Q P L GP R LSRP S L+T
Sbjct: 142 --SRPLQTHLQPP-------GVLSGPSSSSRLLSRPDSCLST 174
>gi|239747612 PREDICTED: hypothetical protein XP_002347909 [Homo
sapiens]
Length = 211
Score = 35.8 bits (81), Expect = 0.063
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Query: 170 RVRAAGSLPSAELSSNSCSPGCGPEVPPTPPGSHSAFTSSFSFIRLSLGSAGERGEAEGC 229
R+ AA + S+ LS+ S P + P G+HS+ + S G +G R +
Sbjct: 85 RLTAASRVQSSCLSAASAGPAPACQWPLQAHGAHSSQRPFQAQFFPSGGLSGPRTSS--- 141
Query: 230 PPSREAESHCQSPQEMGAKAASLDGPHEDPRCLSRPFSLLAT 271
SR ++H Q P L GP R LSRP S L+T
Sbjct: 142 --SRPLQTHLQPP-------GVLSGPSSSSRLLSRPDSCLST 174
>gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 35.4 bits (80), Expect = 0.082
Identities = 64/251 (25%), Positives = 94/251 (37%), Gaps = 34/251 (13%)
Query: 4 GGPQGAPAAAGGGGVSHRAGSRDCLPPAAC--FRRRRLARRPGYMRSSTGPGIGFLSPAV 61
G G A GGG S RAG+R P + C R+ +RR + SS G G G P
Sbjct: 158 GSHSGPRAGTPGGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWG-GSG-TPPPP 215
Query: 62 GTLFRFPGGVSGEESHHSESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSAHFGIQ 121
L+ GG +G + S R C + P S A T RG H G+Q
Sbjct: 216 RALWNRHGGAAGARAQVRGSEKRACPGST------LPPSSVLAGCVGTRARG---HGGVQ 266
Query: 122 LRGGTRLPDRLSWPCGPGSAGWQQEFAAMDSSETLDASWEAACSDGARRVRAAGSLPSAE 181
+ R S P ++G + LD S +AA + R A + P +
Sbjct: 267 RQ-------RFSAPSSHSTSGGRPTGERSSREPLLDPS-KAARASALPTARVAHASPPS- 317
Query: 182 LSSNSCSPGCGPEVPPTPPGSHSAFTSSFSFIRLSLGSAGERGEAEG--CPPSREAESHC 239
L++ G G P G+ +R L +A E G P++ +E
Sbjct: 318 LAAAQWRLGGGKRKPTVLKGA----------VRTDLSTAEEEDPRSGRALEPAQGSELWA 367
Query: 240 QSPQEMGAKAA 250
++ + G+ A
Sbjct: 368 RAERHGGSSGA 378
>gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 35.4 bits (80), Expect = 0.082
Identities = 64/251 (25%), Positives = 94/251 (37%), Gaps = 34/251 (13%)
Query: 4 GGPQGAPAAAGGGGVSHRAGSRDCLPPAAC--FRRRRLARRPGYMRSSTGPGIGFLSPAV 61
G G A GGG S RAG+R P + C R+ +RR + SS G G G P
Sbjct: 158 GSHSGPRAGTPGGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWG-GSG-TPPPP 215
Query: 62 GTLFRFPGGVSGEESHHSESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSAHFGIQ 121
L+ GG +G + S R C + P S A T RG H G+Q
Sbjct: 216 RALWNRHGGAAGARAQVRGSEKRACPGST------LPPSSVLAGCVGTRARG---HGGVQ 266
Query: 122 LRGGTRLPDRLSWPCGPGSAGWQQEFAAMDSSETLDASWEAACSDGARRVRAAGSLPSAE 181
+ R S P ++G + LD S +AA + R A + P +
Sbjct: 267 RQ-------RFSAPSSHSTSGGRPTGERSSREPLLDPS-KAARASALPTARVAHASPPS- 317
Query: 182 LSSNSCSPGCGPEVPPTPPGSHSAFTSSFSFIRLSLGSAGERGEAEG--CPPSREAESHC 239
L++ G G P G+ +R L +A E G P++ +E
Sbjct: 318 LAAAQWRLGGGKRKPTVLKGA----------VRTDLSTAEEEDPRSGRALEPAQGSELWA 367
Query: 240 QSPQEMGAKAA 250
++ + G+ A
Sbjct: 368 RAERHGGSSGA 378
>gi|12707580 paired-like homeobox 2b [Homo sapiens]
Length = 314
Score = 35.4 bits (80), Expect = 0.082
Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 8/100 (8%)
Query: 3 GGGPQ--GAPAAAGGGGVS---HRAGSRDCLPPAACFRRRRLARRPGYMRSSTGPGIGFL 57
GGGP GAP AAG GG + G+ AA A G + ++ GPG G+
Sbjct: 215 GGGPSPAGAPGAAGPGGPGGEPGKGGAAAAAAAAAAAAAAAAAAAAGGLAAAGGPGQGW- 273
Query: 58 SPAVGTLFRFPGGVSGEESHHSESRARQCGLDSRGLLVRS 97
+P G + P + G + S R G ++ LV+S
Sbjct: 274 APGPGPITSIPDSLGGPFASVLSSLQRPNG--AKAALVKS 311
>gi|28559039 mediator complex subunit 1 [Homo sapiens]
Length = 1581
Score = 35.0 bits (79), Expect = 0.11
Identities = 67/295 (22%), Positives = 101/295 (34%), Gaps = 61/295 (20%)
Query: 6 PQGAPAAAGGGGVSHRAGSRDCLPPAACFRRRRLARRPGYM-RSSTGPGIGFLSPAVGTL 64
P+ A G SH + +R PP + ++ PG RS T PG+ P
Sbjct: 1010 PKRKKADTEGKSPSHSSSNRPFTPPTSTGG----SKSPGSAGRSQTPPGVA-TPPIPKIT 1064
Query: 65 FRFPGGV--------------------SGEESHHSESRARQCGLDSRGLLVRSPVSKSAA 104
+ P G SG +SHHS S + + G + KS+
Sbjct: 1065 IQIPKGTVMVGKPSSHSQYTSSGSVSSSGSKSHHSHSSSSSSSASTSGKM------KSSK 1118
Query: 105 APTVTSVRGTSAHFGIQLRGGTRLPDRLSWPCG-PGSAGWQQEFAAMDSSETLDASWEAA 163
+ +S + +S+ + Q G+ S G PGS+ + + SS T
Sbjct: 1119 SEGSSSSKLSSSMYSSQGSSGSSQSKNSSQSGGKPGSSPITKHGLSSGSSST------KM 1172
Query: 164 CSDGARRVRAAGSLPSAELSSNSCSPGCGPE--------VPPTPP-------------GS 202
G SL +S + P G + VP TPP GS
Sbjct: 1173 KPQGKPSSLMNPSLSKPNISPSHSRPPGGSDKLASPMKPVPGTPPSSKAKSPISSGSGGS 1232
Query: 203 HSAFTSSFSFIRLSLGSAGERGEAEGCPP-SREAESHCQSPQEMGAKAASLDGPH 256
H + TSS S ++ S G ++ PP S + S G+ +S H
Sbjct: 1233 HMSGTSSSSGMKSSSGLGSSGSLSQKTPPSSNSCTASSSSFSSSGSSMSSSQNQH 1287
Score = 31.6 bits (70), Expect = 1.2
Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 17/134 (12%)
Query: 165 SDGARRVRAAGSLPSAELSSNSCSPGCGPEVPPTPPGSHS--AFTSSFSFIRLSLGSA-G 221
S G+ +G+ S+ + S+S G TPP S+S A +SSFS S+ S+
Sbjct: 1226 SSGSGGSHMSGTSSSSGMKSSSGLGSSGSLSQKTPPSSNSCTASSSSFSSSGSSMSSSQN 1285
Query: 222 ERGEAEGCPPSREAESHCQSPQEMGAKAASLDGP-HEDPRCLSRPFSLLATRVSADLAQA 280
+ G ++G PSR + + + GP EDP + + +
Sbjct: 1286 QHGSSKGKSPSRNKKPSLTAVIDKLKHGVVTSGPGGEDP-------------LDGQMGVS 1332
Query: 281 ARNSSRPERDMHSL 294
+SS P H++
Sbjct: 1333 TNSSSHPMSSKHNM 1346
Score = 29.3 bits (64), Expect = 5.9
Identities = 36/143 (25%), Positives = 54/143 (37%), Gaps = 8/143 (5%)
Query: 183 SSNSCSPGCGPEVPPTPPGSHSAFTSSFSFIRLSLGSAGERGEAE--GCPPSREAESHCQ 240
SS+S S + + S S +SS + S GS+ + ++ G P S H
Sbjct: 1104 SSSSASTSGKMKSSKSEGSSSSKLSSSMYSSQGSSGSSQSKNSSQSGGKPGSSPITKHGL 1163
Query: 241 SPQEMGAKAASLDGPHEDPRCLSRPFSLLATRVSADLAQAARNSSRPERDMHSLPDMDPG 300
S K P P L P SL +S ++ S + M +P P
Sbjct: 1164 SSGSSSTKMK----PQGKPSSLMNP-SLSKPNISPSHSRPPGGSDKLASPMKPVPGTPP- 1217
Query: 301 SSSSLDPSLAGCGGDGSSGSGDA 323
SS + P +G GG SG+ +
Sbjct: 1218 SSKAKSPISSGSGGSHMSGTSSS 1240
>gi|11138123 cholinergic receptor, nicotinic, alpha 10 [Homo
sapiens]
Length = 450
Score = 34.7 bits (78), Expect = 0.14
Identities = 30/80 (37%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Query: 191 CGPEVPPTPPGSHSAFTSSFSFIRLSLG-SAGERGEAEGCPPSREAESHCQSPQEMGAKA 249
CGP V P P A+ + L+ G ERGE C SR E SPQ A
Sbjct: 325 CGPSVRPVP-----AWARALLLGHLARGLCVRERGEP--CGQSRPPELS-PSPQSPEGGA 376
Query: 250 ASLDGPHEDPRCLSRPFSLL 269
GP +PRCL R +LL
Sbjct: 377 GPPAGPCHEPRCLCRQEALL 396
>gi|145699105 connexin40.1 [Homo sapiens]
Length = 370
Score = 34.7 bits (78), Expect = 0.14
Identities = 48/182 (26%), Positives = 63/182 (34%), Gaps = 42/182 (23%)
Query: 28 LPPAACFRRRRLARRPGYMRSSTGPGIGFLSPAVGTLFRFPGGVSGEESHHSESRA--RQ 85
L C RRR+ RRPG P R G SG H+E R +
Sbjct: 213 LADLVCSLRRRMRRRPG--------------PPTSPSIRKQSGASG----HAEGRRTDEE 254
Query: 86 CGLDSRGLLVRSPVSKSAAAPTVTSVRGTSAHFGIQLRGGTRLPDRLSWPCGPGSAGWQQ 145
G + G +P A S R TS ++ G T++PD +
Sbjct: 255 GGREEEG--APAPPGARAGGEGAGSPRRTS-----RVSGHTKIPDE------------DE 295
Query: 146 EFAAMDSSETLDASWEAACS-DGARRVRAAGS--LPSAELSSNSCSPGCGPEVPPTPPGS 202
+SE L + A+ R +GS PSA S + P C PP PP S
Sbjct: 296 SEVTSSASEKLGRQPRGRPHREAAQDPRGSGSEEQPSAAPSRLAAPPSCSSLQPPDPPAS 355
Query: 203 HS 204
S
Sbjct: 356 SS 357
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 33.9 bits (76), Expect = 0.24
Identities = 45/169 (26%), Positives = 70/169 (41%), Gaps = 19/169 (11%)
Query: 42 RPGYMRSSTGPGIGFLSPAVGTLFRFPGGVSGEESHHS-ESRARQCGLDSRGLLVRSPVS 100
+P ++T P +P VG+L PGG SH+S + ARQ G V +P S
Sbjct: 1251 KPSGSLANTAPHGSSPTPGVGSLLGGPGGTQAPVSHNSKDPPARQPG--EFLAPVANPSS 1308
Query: 101 KSAAAPTVTSVRGTSAHFGIQLRGGTRLPDRLSWPCGPGSAGWQQEFAAMDSSETLDASW 160
+ P+V S + +S FG G R P + P + Q +++ S L
Sbjct: 1309 TACPKPSVLSSKISS--FGCDPAGFNRDPLGV-----PVAKKGPQPYSSPHSELFLGPKD 1361
Query: 161 EAACSDGARRVRAAGSLPSAELSSNSC-------SPGCGPEVPPTPPGS 202
A C + S A +S+SC + P++P +PPG+
Sbjct: 1362 LAGCF--LEELHPKPSARDAPPASSSCLCQDGEDAGSLEPQLPRSPPGT 1408
>gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo
sapiens]
Length = 729
Score = 33.1 bits (74), Expect = 0.41
Identities = 45/178 (25%), Positives = 67/178 (37%), Gaps = 21/178 (11%)
Query: 98 PVSKS--AAAPTVTSVR----GTSAHFGIQLRGGTRLPDRLSWPCGPGSAGWQQEFAAMD 151
P SK APT T+ G S G + R TR P + G ++ + +
Sbjct: 502 PASKPRRGTAPTRTAAPPWPGGVSVRTGPEKRSSTRPPAEMEPGKGEQASSSESDPEGPI 561
Query: 152 SSETL-----DASWEAACSDGARRVRAAGSLPSAELSSNSCSPGCGPEVPPTPPG---SH 203
+++ L D +E+ SD RR A P + S+ GP PP PP
Sbjct: 562 AAQMLSFVMDDPDFESEGSDTQRR---ADDFPVRDDPSDVTDEDEGPAEPPPPPKLPLPA 618
Query: 204 SAFTSSFSFIRLSLGSAGERGEA----EGCPPSREAESHCQSPQEMGAKAASLDGPHE 257
+ L L AG + + EG PS+E + + +E KAA H+
Sbjct: 619 FRLKNDSDLFGLGLEEAGPKESSEEGKEGKTPSKEKKKKKKKGKEEEEKAAKKKSKHK 676
>gi|122692281 hypothetical protein LOC645369 [Homo sapiens]
Length = 621
Score = 33.1 bits (74), Expect = 0.41
Identities = 42/182 (23%), Positives = 61/182 (33%), Gaps = 28/182 (15%)
Query: 161 EAACSDGARRVRAAGSLPSAELSSNSCSPGCGPEVPPTPPGSHSAFTSSFSFIRLSL--- 217
EA S R AGS +A ++ + + C P +PP S +++ SF+ SL
Sbjct: 320 EAVYSVYRERSGVAGSRRAAAATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAF 379
Query: 218 ------GSAGERGEAEGC------PPSREAESHCQ------SPQEMGAKAASLDGPHEDP 259
G G+AEG PP S + S+ G +P
Sbjct: 380 ALLPLQGGRDRGGDAEGASCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGSMRGARREP 439
Query: 260 RCLSRPFSLLATRVS----ADLAQAARNSSRPERDMHSLPDMDPGSSSSLDPSLAGCGGD 315
P +A R + L + R ++ R LPD S PS D
Sbjct: 440 ---EEPEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPPPSPGSADPD 496
Query: 316 GS 317
S
Sbjct: 497 SS 498
>gi|38158015 mastermind-like 3 [Homo sapiens]
Length = 1133
Score = 33.1 bits (74), Expect = 0.41
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 291 MHSLPDMDPGSSSSLDPSLAGCGGDGSSGSGDA 323
+++ P+ P + SS P+ GCGG G G G A
Sbjct: 33 VNNTPNSTPAAPSSNHPAAGGCGGSGGPGGGSA 65
>gi|112821681 G protein-regulated inducer of neurite outgrowth 1
[Homo sapiens]
Length = 1008
Score = 33.1 bits (74), Expect = 0.41
Identities = 36/147 (24%), Positives = 47/147 (31%), Gaps = 7/147 (4%)
Query: 183 SSNSCSPGCGPEVPPTPPGSHSAFTSSFSFIRLSLGSAGERGEAEGCPPSREAESHCQSP 242
S SP P PG S S + S G RG P+ + S
Sbjct: 48 SQQKASPAPPRHTPDQSPGMESRHRSPSGAGEGASCSDGPRGSLACPSPTCFSPQESPSK 107
Query: 243 QEMGAKAASLDG-PHEDPRCLSRPFSLLATRVSAD------LAQAARNSSRPERDMHSLP 295
+ + A AS+ G P P S + T + + S + D S+
Sbjct: 108 ETLEAHGASISGTPEATTSGKPEPVSSVKTEPKSSDDRNPMFLEKMDFKSSKQADSTSIG 167
Query: 296 DMDPGSSSSLDPSLAGCGGDGSSGSGD 322
DPGSS DP G G GD
Sbjct: 168 KEDPGSSRKADPMFTGKAEPEILGKGD 194
>gi|67089160 promyelocytic leukemia protein isoform 11 [Homo
sapiens]
Length = 781
Score = 32.7 bits (73), Expect = 0.53
Identities = 34/144 (23%), Positives = 50/144 (34%), Gaps = 16/144 (11%)
Query: 168 ARRVRAAGSLPSAELSSNSCSPGC-GPEVPPTPPGSHSAFTSSFSFIRLSLGSAGERGEA 226
AR R++ P S P GP P +P F + + + G A ER
Sbjct: 451 ARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSEVFLPNSNHVASGAGEAEERVVV 510
Query: 227 EGCPPSREAESHCQSPQEMG---AKAASLDGPHEDPRCLSRPFSLLATRVSADLA----- 278
+AE+ C P E + A H P S SLL + ++ L
Sbjct: 511 ISSSEDSDAENSCMEPMETAEPQSSPAHSSPAHSSPAHSSPVQSLLRAQGASSLPCGTYH 570
Query: 279 -------QAARNSSRPERDMHSLP 295
Q A ++ P+ + HS P
Sbjct: 571 PPAWPPHQPAEQAATPDAEPHSEP 594
>gi|15451765 promyelocytic leukemia protein isoform 9 [Homo sapiens]
Length = 829
Score = 32.7 bits (73), Expect = 0.53
Identities = 34/144 (23%), Positives = 50/144 (34%), Gaps = 16/144 (11%)
Query: 168 ARRVRAAGSLPSAELSSNSCSPGC-GPEVPPTPPGSHSAFTSSFSFIRLSLGSAGERGEA 226
AR R++ P S P GP P +P F + + + G A ER
Sbjct: 499 ARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSEVFLPNSNHVASGAGEAEERVVV 558
Query: 227 EGCPPSREAESHCQSPQEMG---AKAASLDGPHEDPRCLSRPFSLLATRVSADLA----- 278
+AE+ C P E + A H P S SLL + ++ L
Sbjct: 559 ISSSEDSDAENSCMEPMETAEPQSSPAHSSPAHSSPAHSSPVQSLLRAQGASSLPCGTYH 618
Query: 279 -------QAARNSSRPERDMHSLP 295
Q A ++ P+ + HS P
Sbjct: 619 PPAWPPHQPAEQAATPDAEPHSEP 642
>gi|45827771 autoantigen RCD8 [Homo sapiens]
Length = 1401
Score = 32.7 bits (73), Expect = 0.53
Identities = 46/171 (26%), Positives = 67/171 (39%), Gaps = 27/171 (15%)
Query: 166 DGARRVRAAGSLPSAELSSNSCSPGCGP----EVPPTPPGSHSAFTSSFSFIRLSLGSAG 221
DG+ + ++GSL + S PG P ++ P PG TS+ S
Sbjct: 662 DGSLTMSSSGSL---QASPRGLLPGLLPAPADKLTPKGPGQVPTATSALSL--------- 709
Query: 222 ERGEAEGCPPSREAESHCQSPQEMGAKAASL--DGPHEDPRCLSRPFSLLATRVSADLAQ 279
E E E + + S +SP + + + +L D P LSR F A +
Sbjct: 710 ELQEVEPLGLPQASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSAPEGLEPDSM 769
Query: 280 AARNSSRPERDMHSLPDMDPGSSSSLDPSLAGCGGDGSSGSGDAHSWDTLL 330
A+ S+ +H L P L P L G DG G GD H+ +LL
Sbjct: 770 ASAASA-----LHLLSPR-PRPGPELGPQL---GLDGGPGDGDRHNTPSLL 811
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.131 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,922,585
Number of Sequences: 37866
Number of extensions: 1038343
Number of successful extensions: 5128
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 179
Number of HSP's that attempted gapping in prelim test: 4856
Number of HSP's gapped (non-prelim): 437
length of query: 369
length of database: 18,247,518
effective HSP length: 104
effective length of query: 265
effective length of database: 14,309,454
effective search space: 3792005310
effective search space used: 3792005310
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.