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Search of human proteins with 13562114
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13562114 beta tubulin 1, class VI [Homo sapiens]
(451 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13562114 beta tubulin 1, class VI [Homo sapiens] 914 0.0
gi|5174735 tubulin, beta, 2 [Homo sapiens] 733 0.0
gi|29788785 tubulin, beta [Homo sapiens] 733 0.0
gi|50592996 tubulin, beta, 4 [Homo sapiens] 732 0.0
gi|29788768 tubulin, beta 2B [Homo sapiens] 732 0.0
gi|21361322 tubulin, beta 4 [Homo sapiens] 729 0.0
gi|4507729 tubulin, beta 2 [Homo sapiens] 728 0.0
gi|14210536 tubulin, beta 6 [Homo sapiens] 724 0.0
gi|42558279 tubulin, beta 8 [Homo sapiens] 718 0.0
gi|55770868 tubulin, beta polypeptide 4, member Q [Homo sapiens] 647 0.0
gi|57013276 tubulin, alpha, ubiquitous [Homo sapiens] 353 1e-97
gi|9507215 tubulin, alpha 8 [Homo sapiens] 351 7e-97
gi|17986283 tubulin, alpha 1a [Homo sapiens] 351 9e-97
gi|156564363 tubulin, alpha 3d [Homo sapiens] 351 9e-97
gi|17921993 tubulin, alpha 3c [Homo sapiens] 351 9e-97
gi|17921989 tubulin, alpha 4a [Homo sapiens] 350 1e-96
gi|14389309 tubulin alpha 6 [Homo sapiens] 350 2e-96
gi|239756254 PREDICTED: similar to tubulin, beta 5 [Homo sapiens] 348 4e-96
gi|239750785 PREDICTED: similar to tubulin, beta 5 [Homo sapiens] 348 4e-96
gi|46409270 tubulin, alpha 3e [Homo sapiens] 343 2e-94
gi|13376181 tubulin, alpha-like 3 [Homo sapiens] 332 4e-91
gi|31543831 tubulin, gamma 1 [Homo sapiens] 284 1e-76
gi|7706751 tubulin, gamma 2 [Homo sapiens] 282 4e-76
gi|7705915 tubulin, epsilon 1 [Homo sapiens] 245 7e-65
gi|169178090 PREDICTED: similar to hCG1784562 [Homo sapiens] 147 1e-35
gi|169179398 PREDICTED: similar to hCG1784562 [Homo sapiens] 147 1e-35
gi|169181282 PREDICTED: similar to hCG1784562 [Homo sapiens] 147 1e-35
gi|50592998 delta-tubulin [Homo sapiens] 135 8e-32
gi|169208124 PREDICTED: similar to hCG1647990 [Homo sapiens] 131 1e-30
gi|239753637 PREDICTED: similar to hCG1642465 [Homo sapiens] 79 8e-15
>gi|13562114 beta tubulin 1, class VI [Homo sapiens]
Length = 451
Score = 914 bits (2363), Expect = 0.0
Identities = 451/451 (100%), Positives = 451/451 (100%)
Query: 1 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGSDRGASALQLERISVYYNEAYGRKYV 60
MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGSDRGASALQLERISVYYNEAYGRKYV
Sbjct: 1 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGSDRGASALQLERISVYYNEAYGRKYV 60
Query: 61 PRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVLEVV 120
PRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVLEVV
Sbjct: 61 PRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVLEVV 120
Query: 121 RHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSDTVV 180
RHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSDTVV
Sbjct: 121 RHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSDTVV 180
Query: 181 EPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTSL 240
EPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTSL
Sbjct: 181 EPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTSL 240
Query: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNTM 300
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNTM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNTM 300
Query: 301 AACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIPPRG 360
AACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIPPRG
Sbjct: 301 AACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIPPRG 360
Query: 361 LSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGEAENNIHDLVS 420
LSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGEAENNIHDLVS
Sbjct: 361 LSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGEAENNIHDLVS 420
Query: 421 EYQQFQDAKAVLEEDEEVTEEAEMEPEDKGH 451
EYQQFQDAKAVLEEDEEVTEEAEMEPEDKGH
Sbjct: 421 EYQQFQDAKAVLEEDEEVTEEAEMEPEDKGH 451
>gi|5174735 tubulin, beta, 2 [Homo sapiens]
Length = 445
Score = 733 bits (1893), Expect = 0.0
Identities = 353/445 (79%), Positives = 398/445 (89%), Gaps = 2/445 (0%)
Query: 1 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGSDRGASALQLERISVYYNEAYGRKYV 60
MREIVH+Q GQCGNQIGAKFWE+I +EHGID G+ G S LQLERI+VYYNEA G KYV
Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 61 PRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVLEVV 120
PRAVLVDLEPGTMDS+RS G +F+PD+FV G SGAGNNWAKGHYTEGAEL+++VL+VV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 121 RHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSDTVV 180
R E+ESCDCLQGFQ+ HSLGGGTGSGMGTLL++KIREEYPDRIMN+FSV+PSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 181 EPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTSL 240
EPYNA LS+HQL+EN D +CIDNEALYDICFRTLKLTTPTYGDLNHLVS TMSG+TT L
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNTM 300
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT++GSQQYRAL+V ELTQQMFDA+N M
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300
Query: 301 AACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIPPRG 360
AACD R GRYLTVA +FRG+MS KEVD+Q+L+VQ +NSS FVEWIPNNVK AVCDIPPRG
Sbjct: 301 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360
Query: 361 LSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGEAENNIHDLVS 420
L M+ATFIGN+TAIQE+F R+SE F+AMF+RKAF+HWYT EGMD EF EAE+N++DLVS
Sbjct: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 421 EYQQFQDAKAVLEEDEEVTEEAEME 445
EYQQ+QDA A EE+ E EEAE E
Sbjct: 421 EYQQYQDATA--EEEGEFEEEAEEE 443
>gi|29788785 tubulin, beta [Homo sapiens]
Length = 444
Score = 733 bits (1892), Expect = 0.0
Identities = 352/445 (79%), Positives = 398/445 (89%), Gaps = 2/445 (0%)
Query: 1 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGSDRGASALQLERISVYYNEAYGRKYV 60
MREIVHIQ GQCGNQIGAKFWE+I +EHGID G+ G S LQL+RISVYYNEA G KYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 60
Query: 61 PRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVLEVV 120
PRA+LVDLEPGTMDS+RS G +F+PD+FV G SGAGNNWAKGHYTEGAEL+++VL+VV
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 121 RHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSDTVV 180
R E+ESCDCLQGFQ+ HSLGGGTGSGMGTLL++KIREEYPDRIMN+FSV+PSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 181 EPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTSL 240
EPYNA LS+HQL+EN D +CIDNEALYDICFRTLKLTTPTYGDLNHLVS TMSG+TT L
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNTM 300
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT++GSQQYRAL+V ELTQQ+FDA+N M
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 300
Query: 301 AACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIPPRG 360
AACD R GRYLTVA +FRG+MS KEVD+Q+L+VQ +NSS FVEWIPNNVK AVCDIPPRG
Sbjct: 301 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360
Query: 361 LSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGEAENNIHDLVS 420
L MA TFIGN+TAIQE+F R+SE F+AMF+RKAF+HWYT EGMD EF EAE+N++DLVS
Sbjct: 361 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 421 EYQQFQDAKAVLEEDEEVTEEAEME 445
EYQQ+QDA A EE+E+ EEAE E
Sbjct: 421 EYQQYQDATA--EEEEDFGEEAEEE 443
>gi|50592996 tubulin, beta, 4 [Homo sapiens]
Length = 450
Score = 732 bits (1890), Expect = 0.0
Identities = 352/450 (78%), Positives = 402/450 (89%), Gaps = 2/450 (0%)
Query: 1 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGSDRGASALQLERISVYYNEAYGRKYV 60
MREIVHIQ GQCGNQIGAKFWE+I +EHGID +G+ G S LQLERISVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYV 60
Query: 61 PRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVLEVV 120
PRA+LVDLEPGTMDS+RS G LF+PD+F+ G SGAGNNWAKGHYTEGAEL+++VL+VV
Sbjct: 61 PRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 121 RHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSDTVV 180
R E E+CDCLQGFQ+ HSLGGGTGSGMGTLL++K+REEYPDRIMN+FSV+PSPKVSDTVV
Sbjct: 121 RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 181 EPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTSL 240
EPYNA LSIHQL+EN D +CIDNEALYDICFRTLKL TPTYGDLNHLVS TMSG+TTSL
Sbjct: 181 EPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSL 240
Query: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNTM 300
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTA+GSQQYRAL+V ELTQQMFDA+N M
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 300
Query: 301 AACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIPPRG 360
AACD R GRYLTVA +FRG+MS KEVD+Q+L++Q++NSS FVEWIPNNVKVAVCDIPPRG
Sbjct: 301 AACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG 360
Query: 361 LSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGEAENNIHDLVS 420
L M++TFIGN+TAIQE+F R+SE F+AMF+RKAF+HWYT EGMD EF EAE+N++DLVS
Sbjct: 361 LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 421 EYQQFQDAKAVLEEDEEVTEEAEMEPEDKG 450
EYQQ+QDA A EE+ E+ E+ E E E +G
Sbjct: 421 EYQQYQDATA--EEEGEMYEDDEEESEAQG 448
>gi|29788768 tubulin, beta 2B [Homo sapiens]
Length = 445
Score = 732 bits (1889), Expect = 0.0
Identities = 354/445 (79%), Positives = 396/445 (88%), Gaps = 1/445 (0%)
Query: 1 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGSDRGASALQLERISVYYNEAYGRKYV 60
MREIVHIQ GQCGNQIGAKFWE+I +EHGID GS G S LQLERI+VYYNEA G KYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60
Query: 61 PRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVLEVV 120
PRA+LVDLEPGTMDS+RS G +F+PD+FV G SGAGNNWAKGHYTEGAEL+++VL+VV
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 121 RHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSDTVV 180
R ESESCDCLQGFQ+ HSLGGGTGSGMGTLL++KIREEYPDRIMN+FSVMPSPKVSDTVV
Sbjct: 121 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180
Query: 181 EPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTSL 240
EPYNA LS+HQL+EN D +CIDNEALYDICFRTLKLTTPTYGDLNHLVS TMSG+TT L
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNTM 300
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT++GSQQYRAL+V ELTQQMFD++N M
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300
Query: 301 AACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIPPRG 360
AACD R GRYLTVA IFRG+MS KEVD+Q+L+VQ +NSS FVEWIPNNVK AVCDIPPRG
Sbjct: 301 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360
Query: 361 LSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGEAENNIHDLVS 420
L M+ATFIGN+TAIQE+F R+SE F+AMF+RKAF+HWYT EGMD EF EAE+N++DLVS
Sbjct: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 421 EYQQFQDAKAVLEEDEEVTEEAEME 445
EYQQ+QDA A E+ E EE E E
Sbjct: 421 EYQQYQDATAD-EQGEFEEEEGEDE 444
>gi|21361322 tubulin, beta 4 [Homo sapiens]
Length = 444
Score = 729 bits (1882), Expect = 0.0
Identities = 352/445 (79%), Positives = 396/445 (88%), Gaps = 3/445 (0%)
Query: 1 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGSDRGASALQLERISVYYNEAYGRKYV 60
MREIVH+Q GQCGNQIGAKFWE+I +EHGID G+ G S LQLERI+VYYNEA G YV
Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV 60
Query: 61 PRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVLEVV 120
PRAVLVDLEPGTMDS+RS G +F+PD+FV G SGAGNNWAKGHYTEGAEL++ VL+VV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV 120
Query: 121 RHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSDTVV 180
R E+ESCDCLQGFQ+ HSLGGGTGSGMGTLL++KIREE+PDRIMN+FSV+PSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV 180
Query: 181 EPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTSL 240
EPYNA LS+HQL+EN D +CIDNEALYDICFRTLKLTTPTYGDLNHLVS TMSG+TT L
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNTM 300
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT++GSQQYRAL+V ELTQQMFDA+N M
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300
Query: 301 AACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIPPRG 360
AACD R GRYLTVA +FRG+MS KEVD+Q+LSVQ++NSS FVEWIPNNVK AVCDIPPRG
Sbjct: 301 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG 360
Query: 361 LSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGEAENNIHDLVS 420
L MAATFIGN+TAIQE+F R+SE F+AMF+RKAF+HWYT EGMD EF EAE+N++DLVS
Sbjct: 361 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 421 EYQQFQDAKAVLEEDEEVTEEAEME 445
EYQQ+QDA A E+ E EEAE E
Sbjct: 421 EYQQYQDATA---EEGEFEEEAEEE 442
>gi|4507729 tubulin, beta 2 [Homo sapiens]
Length = 445
Score = 728 bits (1879), Expect = 0.0
Identities = 353/445 (79%), Positives = 395/445 (88%), Gaps = 1/445 (0%)
Query: 1 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGSDRGASALQLERISVYYNEAYGRKYV 60
MREIVHIQ GQCGNQIGAKFWE+I +EHGID GS G S LQLERI+VYYNEA G KYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYV 60
Query: 61 PRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVLEVV 120
PRA+LVDLEPGTMDS+RS G +F+PD+FV G SGAGNNWAKGHYTEGAEL+++VL+VV
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 121 RHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSDTVV 180
R ESESCDCLQGFQ+ HSLGGGTGSGMGTLL++KIREEYPDRIMN+FSVMPSPKVSDTVV
Sbjct: 121 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180
Query: 181 EPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTSL 240
EPYNA LS+HQL+EN D + IDNEALYDICFRTLKLTTPTYGDLNHLVS TMSG+TT L
Sbjct: 181 EPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNTM 300
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT++GSQQYRAL+V ELTQQMFD++N M
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300
Query: 301 AACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIPPRG 360
AACD R GRYLTVA IFRG+MS KEVD+Q+L+VQ +NSS FVEWIPNNVK AVCDIPPRG
Sbjct: 301 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360
Query: 361 LSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGEAENNIHDLVS 420
L M+ATFIGN+TAIQE+F R+SE F+AMF+RKAF+HWYT EGMD EF EAE+N++DLVS
Sbjct: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 421 EYQQFQDAKAVLEEDEEVTEEAEME 445
EYQQ+QDA A E+ E EE E E
Sbjct: 421 EYQQYQDATAD-EQGEFEEEEGEDE 444
>gi|14210536 tubulin, beta 6 [Homo sapiens]
Length = 446
Score = 724 bits (1870), Expect = 0.0
Identities = 349/445 (78%), Positives = 394/445 (88%), Gaps = 2/445 (0%)
Query: 1 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGSDRGASALQLERISVYYNEAYGRKYV 60
MREIVHIQ GQCGNQIG KFWE+I +EHGID AG G SALQLERI+VYYNE+ +KYV
Sbjct: 1 MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 60
Query: 61 PRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVLEVV 120
PRA LVDLEPGTMDS+RS G LF+PD+F+ G +GAGNNWAKGHYTEGAEL++ VL+VV
Sbjct: 61 PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDAVLDVV 120
Query: 121 RHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSDTVV 180
R E E CDCLQGFQ+ HSLGGGTGSGMGTLL++KIREE+PDRIMN+FSVMPSPKVSDTVV
Sbjct: 121 RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVV 180
Query: 181 EPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTSL 240
EPYNA LS+HQL+EN D +CIDNEALYDICFRTLKLTTPTYGDLNHLVS TMSG+TTSL
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 240
Query: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNTM 300
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT++GSQQYRAL+V ELTQQMFDARN M
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMM 300
Query: 301 AACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIPPRG 360
AACD R GRYLTVA +FRG MS KEVD+Q+L++Q++NSS FVEWIPNNVKVAVCDIPPRG
Sbjct: 301 AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG 360
Query: 361 LSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGEAENNIHDLVS 420
L MA+TFIGN+TAIQE+F R+SE FSAMF+RKAF+HW+T EGMD EF EAE+N++DLVS
Sbjct: 361 LKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS 420
Query: 421 EYQQFQDAKAVLEEDEEVTEEAEME 445
EYQQ+QDA A + EE E+ E E
Sbjct: 421 EYQQYQDATA--NDGEEAFEDEEEE 443
>gi|42558279 tubulin, beta 8 [Homo sapiens]
Length = 444
Score = 718 bits (1853), Expect = 0.0
Identities = 343/441 (77%), Positives = 390/441 (88%)
Query: 1 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGSDRGASALQLERISVYYNEAYGRKYV 60
MREIV QIGQCGNQIGAKFWE+I +EH ID AG+ G S LQLERI+VYYNEA G +YV
Sbjct: 1 MREIVLTQIGQCGNQIGAKFWEVISDEHAIDSAGTYHGDSHLQLERINVYYNEASGGRYV 60
Query: 61 PRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVLEVV 120
PRAVLVDLEPGTMDS+RS G +F+PD+F+ G GAGNNWAKGHYTEGAEL+E+V++VV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQVFRPDNFIFGQCGAGNNWAKGHYTEGAELMESVMDVV 120
Query: 121 RHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSDTVV 180
R E+ESCDCLQGFQ+ HSLGGGTGSGMGTLL++KIREEYPDRI+N+FS++PSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRIINTFSILPSPKVSDTVV 180
Query: 181 EPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTSL 240
EPYNA LS+HQLIENAD FCIDNEALYDIC +TLKL TPTYGDLNHLVS TMSG+TT L
Sbjct: 181 EPYNATLSVHQLIENADETFCIDNEALYDICSKTLKLPTPTYGDLNHLVSATMSGVTTCL 240
Query: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNTM 300
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT++GSQQYRAL+VAELTQQMFDA+N M
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVAELTQQMFDAKNMM 300
Query: 301 AACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIPPRG 360
AACD R GRYLT A IFRG+M +EVD+Q+ ++Q +NSS F +W+PNNVK AVCDIPPRG
Sbjct: 301 AACDPRHGRYLTAAAIFRGRMPMREVDEQMFNIQDKNSSYFADWLPNNVKTAVCDIPPRG 360
Query: 361 LSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGEAENNIHDLVS 420
L M+ATFIGNNTAIQE+F RVSE F+AMF+RKAF+HWYT EGMD EF EAE+N++DLVS
Sbjct: 361 LKMSATFIGNNTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 421 EYQQFQDAKAVLEEDEEVTEE 441
EYQQ+QDA A EEDEE EE
Sbjct: 421 EYQQYQDATAEEEEDEEYAEE 441
>gi|55770868 tubulin, beta polypeptide 4, member Q [Homo sapiens]
Length = 434
Score = 647 bits (1669), Expect = 0.0
Identities = 314/430 (73%), Positives = 365/430 (84%), Gaps = 1/430 (0%)
Query: 1 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGSDRGASALQLERISVYYNEAYGRKYV 60
MRE+V Q GQCGNQIGAKFWE+I +EH ID AG+ G S LQLERI+V+++EA G +YV
Sbjct: 1 MRELVLTQTGQCGNQIGAKFWEVISDEHAIDSAGTYHGDSHLQLERINVHHHEASGGRYV 60
Query: 61 PRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVLEVV 120
RAVLVDLEPGTMDS+RS G +F+PD+F+ GAGNNWAKG YTEGAEL E+V++VV
Sbjct: 61 SRAVLVDLEPGTMDSVRSGPFGQVFRPDNFISRQCGAGNNWAKGRYTEGAELTESVMDVV 120
Query: 121 RHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSDTVV 180
R E+ESCDCLQGFQ+ HSLGGGTGSGMGTLL++KI EEYPDRI+N+ S++ PKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIWEEYPDRIINTLSILLLPKVSDTVV 180
Query: 181 EPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTSL 240
EPYNA LS+HQLIENAD FCIDNEALYDIC RTLKL TPTYGDLNHLVS TMSG+TT L
Sbjct: 181 EPYNATLSVHQLIENADETFCIDNEALYDICSRTLKLPTPTYGDLNHLVSATMSGVTTCL 240
Query: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNTM 300
FP QLNADLRKLA+NMVPFPRLHFFMPGFAPLT++GSQQYRAL+VAELTQQMFDA+N M
Sbjct: 241 CFPDQLNADLRKLAMNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVAELTQQMFDAKNMM 300
Query: 301 AACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIPPRG 360
AA D R GRYLT A IF+G+M +EVD+Q+ ++Q +NSS F +W PNNVK AVCDIPP G
Sbjct: 301 AARDPRHGRYLTAAAIFQGRMPMREVDEQMFNIQDKNSSYFADWFPNNVKTAVCDIPPWG 360
Query: 361 LSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGEAENNIHDLVS 420
L M+ TF GNNTA+QE+ RVSE F+A F+RKAF+HWYT EGMD EF EAE+N++DLVS
Sbjct: 361 LKMSVTFTGNNTAVQEL-KRVSEQFTATFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 419
Query: 421 EYQQFQDAKA 430
EYQQ+QDA A
Sbjct: 420 EYQQYQDATA 429
>gi|57013276 tubulin, alpha, ubiquitous [Homo sapiens]
Length = 451
Score = 353 bits (907), Expect = 1e-97
Identities = 182/452 (40%), Positives = 265/452 (58%), Gaps = 13/452 (2%)
Query: 1 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAG---SDRGASALQLERISVYYNEAYGR 57
MRE + I +GQ G QIG WE+ EHGI G SD+ + + +++E
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGD-DSFNTFFSETGAG 59
Query: 58 KYVPRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVL 117
K+VPRAV VDLEP +D +R+ LF P+ + G A NN+A+GHYT G E+I+ VL
Sbjct: 60 KHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVL 119
Query: 118 EVVRHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSD 177
+ +R ++ C LQGF + HS GGGTGSG +LLM ++ +Y + FS+ P+P+VS
Sbjct: 120 DRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVST 179
Query: 178 TVVEPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGIT 237
VVEPYN++L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+S +S IT
Sbjct: 180 AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSIT 239
Query: 238 TSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDAR 297
SLRF G LN DL + N+VP+PR+HF + +AP+ + + LSVAE+T F+
Sbjct: 240 ASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 299
Query: 298 NTMAACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIP 357
N M CD R G+Y+ ++RG + K+V+ + +++T+ S FV+W P KV + P
Sbjct: 300 NQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQP 359
Query: 358 P--------RGLSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFG 409
P + A + N TAI E + R+ F M+ ++AFVHWY EGM+ EF
Sbjct: 360 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 419
Query: 410 EAENNIHDLVSEYQQFQDAKAVLEEDEEVTEE 441
EA ++ L +Y++ +V E EE EE
Sbjct: 420 EAREDMAALEKDYEEV-GVDSVEGEGEEEGEE 450
>gi|9507215 tubulin, alpha 8 [Homo sapiens]
Length = 449
Score = 351 bits (901), Expect = 7e-97
Identities = 173/434 (39%), Positives = 261/434 (60%), Gaps = 10/434 (2%)
Query: 1 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGS-DRGASALQLE-RISVYYNEAYGRK 58
MRE + + +GQ G QIG WE+ EHGI G+ D AS + + + +++E K
Sbjct: 1 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFDAQASKINDDDSFTTFFSETGNGK 60
Query: 59 YVPRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVLE 118
+VPRAV++DLEP +D +R+ LF P+ + G A NN+A+GHYT G E I+ VL+
Sbjct: 61 HVPRAVMIDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLD 120
Query: 119 VVRHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSDT 178
+R +++C LQGF I HS GGGTGSG +LLM ++ +Y + F++ P+P+VS
Sbjct: 121 RIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTA 180
Query: 179 VVEPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITT 238
VVEPYN++L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+S +S IT
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240
Query: 239 SLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARN 298
SLRF G LN DL + N+VP+PR+HF + +AP+ + + LSVAE+T F+ +
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCFEPNS 300
Query: 299 TMAACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIPP 358
M CD R G+Y+ ++RG + K+V+ + +++T+ + FV+W P KV + PP
Sbjct: 301 QMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPP 360
Query: 359 --------RGLSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGE 410
+ A + N TAI E + R+ F M+ ++AFVHWY EGM+ EF E
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 411 AENNIHDLVSEYQQ 424
A ++ L +Y++
Sbjct: 421 AREDLAALEKDYEE 434
>gi|17986283 tubulin, alpha 1a [Homo sapiens]
Length = 451
Score = 351 bits (900), Expect = 9e-97
Identities = 180/452 (39%), Positives = 264/452 (58%), Gaps = 13/452 (2%)
Query: 1 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAG---SDRGASALQLERISVYYNEAYGR 57
MRE + I +GQ G QIG WE+ EHGI G SD+ + + +++E
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGD-DSFNTFFSETGAG 59
Query: 58 KYVPRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVL 117
K+VPRAV VDLEP +D +R+ LF P+ + G A NN+A+GHYT G E+I+ VL
Sbjct: 60 KHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVL 119
Query: 118 EVVRHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSD 177
+ +R ++ C LQGF + HS GGGTGSG +LLM ++ +Y + FS+ P+P+VS
Sbjct: 120 DRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVST 179
Query: 178 TVVEPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGIT 237
VVEPYN++L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+ +S IT
Sbjct: 180 AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 239
Query: 238 TSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDAR 297
SLRF G LN DL + N+VP+PR+HF + +AP+ + + LSVAE+T F+
Sbjct: 240 ASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 299
Query: 298 NTMAACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIP 357
N M CD R G+Y+ ++RG + K+V+ + +++T+ + FV+W P KV + P
Sbjct: 300 NQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 359
Query: 358 P--------RGLSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFG 409
P + A + N TAI E + R+ F M+ ++AFVHWY EGM+ EF
Sbjct: 360 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 419
Query: 410 EAENNIHDLVSEYQQFQDAKAVLEEDEEVTEE 441
EA ++ L +Y++ +V E EE EE
Sbjct: 420 EAREDMAALEKDYEEV-GVDSVEGEGEEEGEE 450
>gi|156564363 tubulin, alpha 3d [Homo sapiens]
Length = 450
Score = 351 bits (900), Expect = 9e-97
Identities = 178/450 (39%), Positives = 263/450 (58%), Gaps = 14/450 (3%)
Query: 1 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAG---SDRGASALQLERISVYYNEAYGR 57
MRE + I +GQ G QIG WE+ EHGI G SD+ + + +++E
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGD-DSFNTFFSETGAG 59
Query: 58 KYVPRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVL 117
K+VPRAV VDLEP +D +R+ LF P+ + G A NN+A+GHYT G E+++ VL
Sbjct: 60 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 119
Query: 118 EVVRHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSD 177
+ +R ++ C LQGF I HS GGGTGSG +LLM ++ +Y + F++ P+P+VS
Sbjct: 120 DRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVST 179
Query: 178 TVVEPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGIT 237
VVEPYN++L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+ +S IT
Sbjct: 180 AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 239
Query: 238 TSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDAR 297
SLRF G LN DL + N+VP+PR+HF + +AP+ + + LSVAE+T F+
Sbjct: 240 ASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 299
Query: 298 NTMAACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIP 357
N M CD R G+Y+ ++RG + K+V+ + +++T+ + FV+W P KV + P
Sbjct: 300 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 359
Query: 358 P--------RGLSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFG 409
P + A + N TAI E + R+ F M+ ++AFVHWY EGM+ EF
Sbjct: 360 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 419
Query: 410 EAENNIHDLVSEYQQ--FQDAKAVLEEDEE 437
EA ++ L +Y++ +A EE EE
Sbjct: 420 EAREDLAALEKDYEEVGVDSVEAEAEEGEE 449
>gi|17921993 tubulin, alpha 3c [Homo sapiens]
Length = 450
Score = 351 bits (900), Expect = 9e-97
Identities = 178/450 (39%), Positives = 263/450 (58%), Gaps = 14/450 (3%)
Query: 1 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAG---SDRGASALQLERISVYYNEAYGR 57
MRE + I +GQ G QIG WE+ EHGI G SD+ + + +++E
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGD-DSFNTFFSETGAG 59
Query: 58 KYVPRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVL 117
K+VPRAV VDLEP +D +R+ LF P+ + G A NN+A+GHYT G E+++ VL
Sbjct: 60 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 119
Query: 118 EVVRHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSD 177
+ +R ++ C LQGF I HS GGGTGSG +LLM ++ +Y + F++ P+P+VS
Sbjct: 120 DRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVST 179
Query: 178 TVVEPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGIT 237
VVEPYN++L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+ +S IT
Sbjct: 180 AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 239
Query: 238 TSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDAR 297
SLRF G LN DL + N+VP+PR+HF + +AP+ + + LSVAE+T F+
Sbjct: 240 ASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 299
Query: 298 NTMAACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIP 357
N M CD R G+Y+ ++RG + K+V+ + +++T+ + FV+W P KV + P
Sbjct: 300 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 359
Query: 358 P--------RGLSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFG 409
P + A + N TAI E + R+ F M+ ++AFVHWY EGM+ EF
Sbjct: 360 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 419
Query: 410 EAENNIHDLVSEYQQ--FQDAKAVLEEDEE 437
EA ++ L +Y++ +A EE EE
Sbjct: 420 EAREDLAALEKDYEEVGVDSVEAEAEEGEE 449
>gi|17921989 tubulin, alpha 4a [Homo sapiens]
Length = 448
Score = 350 bits (899), Expect = 1e-96
Identities = 176/435 (40%), Positives = 257/435 (59%), Gaps = 12/435 (2%)
Query: 1 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAG---SDRGASALQLERISVYYNEAYGR 57
MRE + + +GQ G Q+G WE+ EHGI G SD+ + + ++ E
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGD-DSFTTFFCETGAG 59
Query: 58 KYVPRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVL 117
K+VPRAV VDLEP +D IR+ LF P+ + G A NN+A+GHYT G E+I+ VL
Sbjct: 60 KHVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVL 119
Query: 118 EVVRHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSD 177
+ +R S+ C LQGF + HS GGGTGSG +LLM ++ +Y + FS+ P+P+VS
Sbjct: 120 DRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVST 179
Query: 178 TVVEPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGIT 237
VVEPYN++L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+S +S IT
Sbjct: 180 AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSIT 239
Query: 238 TSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDAR 297
SLRF G LN DL + N+VP+PR+HF + +AP+ + + LSVAE+T F+
Sbjct: 240 ASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 299
Query: 298 NTMAACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIP 357
N M CD R G+Y+ ++RG + K+V+ + +++T+ S FV+W P KV + P
Sbjct: 300 NQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQP 359
Query: 358 P--------RGLSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFG 409
P + A + N TAI E + R+ F M+ ++AFVHWY EGM+ EF
Sbjct: 360 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 419
Query: 410 EAENNIHDLVSEYQQ 424
EA ++ L +Y++
Sbjct: 420 EAREDMAALEKDYEE 434
>gi|14389309 tubulin alpha 6 [Homo sapiens]
Length = 449
Score = 350 bits (897), Expect = 2e-96
Identities = 176/448 (39%), Positives = 263/448 (58%), Gaps = 12/448 (2%)
Query: 1 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAG---SDRGASALQLERISVYYNEAYGR 57
MRE + I +GQ G QIG WE+ EHGI G SD+ + + +++E
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGD-DSFNTFFSETGAG 59
Query: 58 KYVPRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVL 117
K+VPRAV VDLEP +D +R+ LF P+ + G A NN+A+GHYT G E+I+ VL
Sbjct: 60 KHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVL 119
Query: 118 EVVRHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSD 177
+ +R ++ C LQGF + HS GGGTGSG +LLM ++ +Y + FS+ P+P+VS
Sbjct: 120 DRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVST 179
Query: 178 TVVEPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGIT 237
VVEPYN++L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+S +S IT
Sbjct: 180 AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSIT 239
Query: 238 TSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDAR 297
SLRF G LN DL + N+VP+PR+HF + +AP+ + + L+VAE+T F+
Sbjct: 240 ASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPA 299
Query: 298 NTMAACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIP 357
N M CD R G+Y+ ++RG + K+V+ + +++T+ + FV+W P KV + P
Sbjct: 300 NQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 359
Query: 358 P--------RGLSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFG 409
P + A + N TA+ E + R+ F M+ ++AFVHWY EGM+ EF
Sbjct: 360 PTVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 419
Query: 410 EAENNIHDLVSEYQQFQDAKAVLEEDEE 437
EA ++ L +Y++ A E++ E
Sbjct: 420 EAREDMAALEKDYEEVGADSADGEDEGE 447
>gi|239756254 PREDICTED: similar to tubulin, beta 5 [Homo sapiens]
Length = 365
Score = 348 bits (894), Expect = 4e-96
Identities = 206/425 (48%), Positives = 251/425 (59%), Gaps = 73/425 (17%)
Query: 1 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGSDRGASALQLERISVYYNEAYGRKYV 60
M EIVHIQ G CG+QI AKFWE+I + H +DL +E G KYV
Sbjct: 1 MEEIVHIQTGHCGSQISAKFWEVISDGHSMDLP------------------SEGTGDKYV 42
Query: 61 PRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVLEVV 120
P +LVD EPG MDS
Sbjct: 43 PPTILVDPEPGIMDS--------------------------------------------- 57
Query: 121 RHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSDTVV 180
E+ESCDCLQGFQ+ HSLG GTGSGMGTLL +KIREE PD IMN+ SVMPS KV TV
Sbjct: 58 -KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGTVA 116
Query: 181 EPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTSL 240
EP +A L IH L+EN D D EA Y+I FRTL+LTT Y DL H VS M G+TT L
Sbjct: 117 EPCSAXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTTFL 176
Query: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNTM 300
FP QLN+DL KLAVN V FPRL FFM FAPLT+ GSQ YRAL++ +LTQQ+FDA+N M
Sbjct: 177 CFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFDAKNMM 236
Query: 301 AACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRN-SSCFVEWIPNNVKVAVCDIPPR 359
AA + KEV++Q+LSVQ ++ SS F+EW+ VK A+ DI P
Sbjct: 237 AAPP-------GLPSSMNIHPFMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAMWDILPH 289
Query: 360 GLSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGEAENNIHDLV 419
G MA TF+GN+ A Q++ + S+ F A+ KA +HWY EGM+ EF EAENN++D +
Sbjct: 290 GHKMAVTFVGNSAATQKL-SMASQQFPAVLCGKAVLHWYAGEGMNEMEFAEAENNMNDFI 348
Query: 420 SEYQQ 424
SE++Q
Sbjct: 349 SEHRQ 353
>gi|239750785 PREDICTED: similar to tubulin, beta 5 [Homo sapiens]
Length = 365
Score = 348 bits (894), Expect = 4e-96
Identities = 206/425 (48%), Positives = 251/425 (59%), Gaps = 73/425 (17%)
Query: 1 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGSDRGASALQLERISVYYNEAYGRKYV 60
M EIVHIQ G CG+QI AKFWE+I + H +DL +E G KYV
Sbjct: 1 MEEIVHIQTGHCGSQISAKFWEVISDGHSMDLP------------------SEGTGDKYV 42
Query: 61 PRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVLEVV 120
P +LVD EPG MDS
Sbjct: 43 PPTILVDPEPGIMDS--------------------------------------------- 57
Query: 121 RHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSDTVV 180
E+ESCDCLQGFQ+ HSLG GTGSGMGTLL +KIREE PD IMN+ SVMPS KV TV
Sbjct: 58 -KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGTVA 116
Query: 181 EPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTSL 240
EP +A L IH L+EN D D EA Y+I FRTL+LTT Y DL H VS M G+TT L
Sbjct: 117 EPCSAXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTTFL 176
Query: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNTM 300
FP QLN+DL KLAVN V FPRL FFM FAPLT+ GSQ YRAL++ +LTQQ+FDA+N M
Sbjct: 177 CFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFDAKNMM 236
Query: 301 AACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRN-SSCFVEWIPNNVKVAVCDIPPR 359
AA + KEV++Q+LSVQ ++ SS F+EW+ VK A+ DI P
Sbjct: 237 AAPP-------GLPSSMNIHPFMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAMWDILPH 289
Query: 360 GLSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGEAENNIHDLV 419
G MA TF+GN+ A Q++ + S+ F A+ KA +HWY EGM+ EF EAENN++D +
Sbjct: 290 GHKMAVTFVGNSAATQKL-SMASQQFPAVLCGKAVLHWYAGEGMNEMEFAEAENNMNDFI 348
Query: 420 SEYQQ 424
SE++Q
Sbjct: 349 SEHRQ 353
>gi|46409270 tubulin, alpha 3e [Homo sapiens]
Length = 450
Score = 343 bits (880), Expect = 2e-94
Identities = 176/450 (39%), Positives = 261/450 (58%), Gaps = 14/450 (3%)
Query: 1 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAG---SDRGASALQLERISVYYNEAYGR 57
MRE + I +GQ G QIG WE+ EHGI G SD+ + + +++E
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGD-DSFNTFFSETGAG 59
Query: 58 KYVPRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVL 117
K+VPRAV VDLEP +D +R+ LF P+ + G A +N+A+GHYT G E+++ VL
Sbjct: 60 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAASNYARGHYTIGKEIVDLVL 119
Query: 118 EVVRHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSD 177
+ +R ++ C LQGF I HS GGGTGSG +LLM ++ +Y + F++ P+P+VS
Sbjct: 120 DRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYSKKSKLEFAIYPAPQVST 179
Query: 178 TVVEPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGIT 237
VVEPYN++L+ H +E++D F +DNEA+YDIC R L + PTY +LN L+ +S IT
Sbjct: 180 AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 239
Query: 238 TSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDAR 297
SLRF G LN DL + N+VP+PR+HF + +AP+ + + LSVAE+T F+
Sbjct: 240 ASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPA 299
Query: 298 NTMAACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIP 357
N M CD R G+Y+ ++RG + K+V+ + +++T+ + FV+W P KV + P
Sbjct: 300 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 359
Query: 358 P--------RGLSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFG 409
P + A + N TAI E + R+ F M+ + AFVHWY EGM+ EF
Sbjct: 360 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLVHKFDLMYAKWAFVHWYVGEGMEEGEFS 419
Query: 410 EAENNIHDLVSEYQQ--FQDAKAVLEEDEE 437
EA ++ L + ++ +A EE EE
Sbjct: 420 EAREDLAALEKDCEEVGVDSVEAEAEEGEE 449
>gi|13376181 tubulin, alpha-like 3 [Homo sapiens]
Length = 446
Score = 332 bits (851), Expect = 4e-91
Identities = 174/441 (39%), Positives = 253/441 (57%), Gaps = 17/441 (3%)
Query: 1 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGSDRGASALQLERISV---------YY 51
MRE + I IGQ G QIG WE+ EHGI G QLE + ++
Sbjct: 1 MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAKMEHTNASFDTFF 60
Query: 52 NEAYGRKYVPRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAE 111
E K+VPRA+ VDLEP +D IR+ + +LF P+ + G A NN+A+G Y+ G+E
Sbjct: 61 CETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGSE 120
Query: 112 LIENVLEVVRHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMP 171
+I+ VLE R +E C LQGF I S GGGTGSG +LLM ++ EY + FSV P
Sbjct: 121 VIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVYP 180
Query: 172 SPKVSDTVVEPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSL 231
+P++S VVEPYN+VL+ H E+ D F +DNEA+YDIC R L + P++ +N LV
Sbjct: 181 APRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVVQ 240
Query: 232 TMSGITTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQ 291
+S IT SLRF G LN DL + N+VP+PR+HF M FAP+ + + SV+++T
Sbjct: 241 VVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDITT 300
Query: 292 QMFDARNTMAACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKV 351
F++ N + CD R G+Y+ ++RG + KEV+ + + ++R+S FV+W P KV
Sbjct: 301 ACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFKV 360
Query: 352 AVCDIPP--------RGLSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGM 403
+ + PP + + + N TAI E + R+ F M+ ++AF+HWY EGM
Sbjct: 361 GINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREGM 420
Query: 404 DINEFGEAENNIHDLVSEYQQ 424
+ EF EA ++ L +Y++
Sbjct: 421 EEAEFLEAREDLAALERDYEE 441
>gi|31543831 tubulin, gamma 1 [Homo sapiens]
Length = 451
Score = 284 bits (726), Expect = 1e-76
Identities = 149/435 (34%), Positives = 254/435 (58%), Gaps = 16/435 (3%)
Query: 2 REIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGSDRGASALQLERISVYYNEAYGRKYVP 61
REI+ +Q+GQCGNQIG +FW+ + EHGI G + +R V++ +A Y+P
Sbjct: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIP 62
Query: 62 RAVLVDLEPGTMDSIRSSKLGALFQPDSFV---HGNSGAGNNWAKGHYTEGAELIENVLE 118
RAVL+DLEP + SI +S L+ P++ HG GAGNNWA G +++G ++ E++ +
Sbjct: 63 RAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGG-GAGNNWASG-FSQGEKIHEDIFD 120
Query: 119 VVRHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSP-KVSD 177
++ E++ D L+GF + HS+ GGTGSG+G+ L+ ++ + YP +++ ++SV P+ ++SD
Sbjct: 121 IIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSD 180
Query: 178 TVVEPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGIT 237
VV+PYN++L++ +L +NAD +DN AL I L + P++ +N LVS MS T
Sbjct: 181 VVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSAST 240
Query: 238 TSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTA-QGSQQYRALSVAELTQQMFDA 296
T+LR+PG +N DL L +++P PRLHF M G+ PLT Q R +V ++ +++
Sbjct: 241 TTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQP 300
Query: 297 RNTMAACDLRRGR---YLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAV 353
+N M + R Y+ + I +G++ +V + L ++ R + F+ W P +++VA+
Sbjct: 301 KNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVAL 360
Query: 354 ---CDIPPRGLSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGE 410
P ++ + N+T+I +F R + + KR+AF+ + E M + F E
Sbjct: 361 SRKSPYLPSAHRVSGLMMANHTSISSLFERTCRQYDKLRKREAFLEQFRKEDMFKDNFDE 420
Query: 411 AENN---IHDLVSEY 422
+ + + L+ EY
Sbjct: 421 MDTSREIVQQLIDEY 435
>gi|7706751 tubulin, gamma 2 [Homo sapiens]
Length = 451
Score = 282 bits (722), Expect = 4e-76
Identities = 149/435 (34%), Positives = 253/435 (58%), Gaps = 16/435 (3%)
Query: 2 REIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGSDRGASALQLERISVYYNEAYGRKYVP 61
REI+ +Q+GQCGNQIG +FW+ + EHGI G + +R V++ +A Y+P
Sbjct: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIP 62
Query: 62 RAVLVDLEPGTMDSIRSSKLGALFQPDSFV---HGNSGAGNNWAKGHYTEGAELIENVLE 118
RAVL+DLEP + SI +S L+ P++ HG GAGNNWA G +++G ++ E++ +
Sbjct: 63 RAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGG-GAGNNWASG-FSQGEKIHEDIFD 120
Query: 119 VVRHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMP-SPKVSD 177
++ E++ D L+GF + HS+ GGTGSG+G+ L+ ++ + YP +++ ++SV P ++SD
Sbjct: 121 IIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEMSD 180
Query: 178 TVVEPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGIT 237
VV+PYN++L++ +L +NAD +DN AL I L + P++ +N LVS MS T
Sbjct: 181 VVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSAST 240
Query: 238 TSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTA-QGSQQYRALSVAELTQQMFDA 296
T+LR+PG +N DL L +++P PRLHF M G+ PLT Q R +V ++ +++
Sbjct: 241 TTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQP 300
Query: 297 RNTMAACDLRRGR---YLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAV 353
+N M + R Y+ + I +G++ +V + L ++ R + F+ W P +++VA+
Sbjct: 301 KNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVAL 360
Query: 354 ---CDIPPRGLSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGE 410
P ++ + N+T+I +F + F + KR AF+ + E M + F E
Sbjct: 361 SRKSPYLPSAHRVSGLMMANHTSISSLFESSCQQFDKLRKRDAFLEQFRKEDMFKDNFDE 420
Query: 411 AENN---IHDLVSEY 422
+ + + +L+ EY
Sbjct: 421 MDRSREVVQELIDEY 435
>gi|7705915 tubulin, epsilon 1 [Homo sapiens]
Length = 475
Score = 245 bits (625), Expect = 7e-65
Identities = 150/476 (31%), Positives = 242/476 (50%), Gaps = 50/476 (10%)
Query: 1 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGSDRGASALQLERISVYYNEAYGR--- 57
M + V +Q+GQCGNQIG FW++ EH A + +G + E IS ++ R
Sbjct: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHA---AVNQKG---IYDEAISSFFRNVDTRVVG 54
Query: 58 -----------KYVPRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHY 106
RAVL+D+E G ++ I L +F + SG+GNNWA GH
Sbjct: 55 DGGSISKGKICSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVGHK 114
Query: 107 TEGAELIENVLEVVRHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNS 166
G+ + +LE R +E CDCLQ F I+HS+GGGTGSG+GT L+ + +E+P+
Sbjct: 115 VFGSLYQDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFV 174
Query: 167 FSVMPSPKVSDTVVEPYNAVLSIHQLIENADACFCIDNEALYDICFR------------T 214
S+ PS + D + PYN++L++ +L E+AD IDN++L+DI + T
Sbjct: 175 TSIYPSGE-DDVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISKIDLMVNSGKLGTT 233
Query: 215 LK---LTTPTYGDL-----------NHLVSLTMSGITTSLRFPGQLNADLRKLAVNMVPF 260
+K L T + G L N++V+ + +T+S RF G LN DL ++++N+VPF
Sbjct: 234 VKPKSLVTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVPF 293
Query: 261 PRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNTMAACDLRRGRYLTVACIFRGK 320
P+LH+ + PL + ++ F + + D + YL A + RG
Sbjct: 294 PQLHYLVSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGN 353
Query: 321 MSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIPPRGLSMAATFIGNNTAIQEIFNR 380
+ ++ + + + + S FV W K ++C +PP G S + + NNT ++ F
Sbjct: 354 VQISDLRRNI--ERLKPSLQFVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFME 411
Query: 381 VSEHFSAMFKRKAFVHWYTS-EGMDINEFGEAENNIHDLVSEYQQFQDAKAVLEED 435
+ E F ++K+KA +H Y EGM+ + F EA +++ L+ EY Q K + +D
Sbjct: 412 LKERFMRLYKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQLDATKNMPVQD 467
>gi|169178090 PREDICTED: similar to hCG1784562 [Homo sapiens]
Length = 316
Score = 147 bits (372), Expect = 1e-35
Identities = 75/141 (53%), Positives = 99/141 (70%), Gaps = 2/141 (1%)
Query: 284 LSVAELTQQMFDARNTMAACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVE 343
L V++LT+QMFDA+N +AACD G YL A I G MS +EVD+Q ++Q + SS F
Sbjct: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAH 235
Query: 344 WIPNNVKVAVCDIPPRGLSMAATFIGNNTAIQEI--FNRVSEHFSAMFKRKAFVHWYTSE 401
WIP+NV+ A CDIPP L M+ TFI NNTAIQE+ F + E F+A F+ KAF+ WY+ +
Sbjct: 236 WIPHNVERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGK 295
Query: 402 GMDINEFGEAENNIHDLVSEY 422
GM EF E E+N+++LVSEY
Sbjct: 296 GMHDVEFAEVESNMNNLVSEY 316
>gi|169179398 PREDICTED: similar to hCG1784562 [Homo sapiens]
Length = 316
Score = 147 bits (372), Expect = 1e-35
Identities = 75/141 (53%), Positives = 99/141 (70%), Gaps = 2/141 (1%)
Query: 284 LSVAELTQQMFDARNTMAACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVE 343
L V++LT+QMFDA+N +AACD G YL A I G MS +EVD+Q ++Q + SS F
Sbjct: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAH 235
Query: 344 WIPNNVKVAVCDIPPRGLSMAATFIGNNTAIQEI--FNRVSEHFSAMFKRKAFVHWYTSE 401
WIP+NV+ A CDIPP L M+ TFI NNTAIQE+ F + E F+A F+ KAF+ WY+ +
Sbjct: 236 WIPHNVERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGK 295
Query: 402 GMDINEFGEAENNIHDLVSEY 422
GM EF E E+N+++LVSEY
Sbjct: 296 GMHDVEFAEVESNMNNLVSEY 316
>gi|169181282 PREDICTED: similar to hCG1784562 [Homo sapiens]
Length = 316
Score = 147 bits (372), Expect = 1e-35
Identities = 75/141 (53%), Positives = 99/141 (70%), Gaps = 2/141 (1%)
Query: 284 LSVAELTQQMFDARNTMAACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVE 343
L V++LT+QMFDA+N +AACD G YL A I G MS +EVD+Q ++Q + SS F
Sbjct: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAH 235
Query: 344 WIPNNVKVAVCDIPPRGLSMAATFIGNNTAIQEI--FNRVSEHFSAMFKRKAFVHWYTSE 401
WIP+NV+ A CDIPP L M+ TFI NNTAIQE+ F + E F+A F+ KAF+ WY+ +
Sbjct: 236 WIPHNVERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSGK 295
Query: 402 GMDINEFGEAENNIHDLVSEY 422
GM EF E E+N+++LVSEY
Sbjct: 296 GMHDVEFAEVESNMNNLVSEY 316
>gi|50592998 delta-tubulin [Homo sapiens]
Length = 453
Score = 135 bits (340), Expect = 8e-32
Identities = 108/460 (23%), Positives = 202/460 (43%), Gaps = 53/460 (11%)
Query: 4 IVHIQIGQCGNQIGAKFWE-MIGEEHGIDLAGSDRGASALQLERISVYYNEAYGRKYVPR 62
IV +Q+GQCGNQIG + ++ ++ + H S R A Q +++E + R
Sbjct: 3 IVTVQLGQCGNQIGFEVFDALLSDSHSSQGLCSMRENEAYQASCKERFFSEEENGVPIAR 62
Query: 63 AVLVDLEPGTMDSIRSSKLGALFQPDSFVHGN-------SGAGNNWAKGHYTEGAELIEN 115
AVLVD+EP ++ + S Q + +G G+GNNWA G+ G E+
Sbjct: 63 AVLVDMEPKVINQMLSKAA----QSGQWKYGQHACFCQKQGSGNNWAYGYSVHGPRHEES 118
Query: 116 VLEVVRHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKV 175
++ ++R E E CD GF I+ S+ GGTGSG+G + + ++Y + + + + P
Sbjct: 119 IMNIIRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIWPY-GT 177
Query: 176 SDTVVEPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSG 235
+ +V+ YN++L++ L ++DA +N+A++ IC + + + ++ D+N +++ +
Sbjct: 178 GEVIVQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLAHQLGS 237
Query: 236 I-----TTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAEL- 289
+ + F + N L L ++VP P P ++ S Y + A L
Sbjct: 238 VFQPTYSAESSFHYRRN-PLGDLMEHLVPHPEFKMLSVRNIPHMSENSLAYTTFTWAGLL 296
Query: 290 --TQQMFDARNTMAA----------------------CDLRRGRYLTVACIFRGKMSTKE 325
+QM + M DL + I RGK
Sbjct: 297 KHLRQMLISNAKMEEGIDRHVWPPLSGLPPLSKMSLNKDLHFNTSIANLVILRGK----- 351
Query: 326 VDQQLLSVQ-TRNSSCFVEWIP--NNVKVAVCDIPPRGLSMAATFIGNNTAIQEIFNRVS 382
D Q V+ ++ + + W+ N V +A + N+ + + + +
Sbjct: 352 -DVQSADVEGFKDPALYTSWLKPVNAFNVWKTQRAFSKYEKSAVLVSNSQFLVKPLDMIV 410
Query: 383 EHFSAMFKRKAFVHWYTSEGMDINEFGEAENNIHDLVSEY 422
MF KA++H YT G++ +F ++ ++ +V+ Y
Sbjct: 411 GKAWNMFASKAYIHQYTKFGIEEEDFLDSFTSLEQVVASY 450
>gi|169208124 PREDICTED: similar to hCG1647990 [Homo sapiens]
Length = 198
Score = 131 bits (329), Expect = 1e-30
Identities = 83/193 (43%), Positives = 109/193 (56%), Gaps = 8/193 (4%)
Query: 233 MSGITTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQ 292
M G+TT L FP QLN+DL KLAVN V FPRL FFM FAPLT+ GSQ YRAL++ +LTQQ
Sbjct: 1 MRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQ 60
Query: 293 MFDARNTMAACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRN-SSCFVEWIPNNVKV 351
+FDA+N MAA + KEV++Q+LSVQ ++ F NN +
Sbjct: 61 VFDAKNMMAAPP-------GLPSSMNIHPFMKEVNEQMLSVQNKSRQQLFHGMDANNGQD 113
Query: 352 AVCDIPPRGLSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGEA 411
+ P E + +S F A+ KA +HWY EGM+ EF EA
Sbjct: 114 SHVGHPSSWPQDGGHVRRQQRGHPEALHGLSGQFPAVLCGKAVLHWYAGEGMNEMEFAEA 173
Query: 412 ENNIHDLVSEYQQ 424
ENN++D +SE++Q
Sbjct: 174 ENNMNDFISEHRQ 186
>gi|239753637 PREDICTED: similar to hCG1642465 [Homo sapiens]
Length = 83
Score = 79.0 bits (193), Expect = 8e-15
Identities = 42/82 (51%), Positives = 55/82 (67%)
Query: 363 MAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGEAENNIHDLVSEY 422
M+ATFI NNTAI E+F + F AMF+ K F+ WY EG D EF EAE+++++LVS+Y
Sbjct: 1 MSATFISNNTAIHELFRCILGPFMAMFRCKDFLQWYLGEGKDEIEFTEAESSMNNLVSKY 60
Query: 423 QQFQDAKAVLEEDEEVTEEAEM 444
Q+ QDA A EE E E E+
Sbjct: 61 QEHQDAMAKEEEIWEDWAEREV 82
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,417,615
Number of Sequences: 37866
Number of extensions: 693496
Number of successful extensions: 2243
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2119
Number of HSP's gapped (non-prelim): 75
length of query: 451
length of database: 18,247,518
effective HSP length: 106
effective length of query: 345
effective length of database: 14,233,722
effective search space: 4910634090
effective search space used: 4910634090
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.