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Search of human proteins with 13559514
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13559514 phosphatidylinositol 4-kinase type 2 alpha [Homo
sapiens]
(479 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13559514 phosphatidylinositol 4-kinase type 2 alpha [Homo sap... 985 0.0
gi|224591401 phosphatidylinositol 4-kinase type 2 beta [Homo sap... 560 e-159
gi|21264339 SRY (sex determining region Y)-box 12 [Homo sapiens] 39 0.010
gi|12707580 paired-like homeobox 2b [Homo sapiens] 37 0.040
gi|239755739 PREDICTED: hypothetical protein [Homo sapiens] 36 0.068
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 35 0.12
gi|14149746 nuclear receptor subfamily 2, group F, member 2 isof... 35 0.20
gi|239750250 PREDICTED: hypothetical protein [Homo sapiens] 35 0.20
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens] 35 0.20
gi|149408126 nemo like kinase [Homo sapiens] 35 0.20
gi|7706435 headcase [Homo sapiens] 35 0.20
gi|31442420 shroom family member 1 [Homo sapiens] 34 0.26
gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein ... 33 0.44
gi|18079216 CASK interacting protein 1 [Homo sapiens] 33 0.57
gi|32490572 erythrocyte membrane protein band 4.1-like 3 [Homo s... 33 0.57
gi|157426823 NK2 homeobox 4 [Homo sapiens] 33 0.57
gi|154759257 DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Homo sap... 33 0.57
gi|71274109 nuclear factor of kappa light polypeptide gene enhan... 33 0.75
gi|239749693 PREDICTED: similar to hCG1806822 [Homo sapiens] 33 0.75
gi|239746609 PREDICTED: hypothetical protein XP_002343799 [Homo ... 33 0.75
gi|7662236 TSC22 domain family, member 2 [Homo sapiens] 33 0.75
gi|20127580 BTB (POZ) domain containing 2 [Homo sapiens] 33 0.75
gi|115334682 SNAP25-interacting protein [Homo sapiens] 33 0.75
gi|148229134 ring finger and KH domain containing 2 [Homo sapiens] 33 0.75
gi|65786661 BTB (POZ) domain containing 11 isoform a [Homo sapiens] 33 0.75
gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens] 33 0.75
gi|239753144 PREDICTED: hypothetical protein [Homo sapiens] 32 0.97
gi|239747710 PREDICTED: hypothetical protein XP_002348232 [Homo ... 32 0.97
gi|239741576 PREDICTED: hypothetical protein XP_002342255 [Homo ... 32 0.97
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 32 0.97
>gi|13559514 phosphatidylinositol 4-kinase type 2 alpha [Homo
sapiens]
Length = 479
Score = 985 bits (2546), Expect = 0.0
Identities = 479/479 (100%), Positives = 479/479 (100%)
Query: 1 MDETSPLVSPERAQPPDYTFPSGSGAHFPQVPGGAVRVAAAAGSGPSPPGSPGHDRERQP 60
MDETSPLVSPERAQPPDYTFPSGSGAHFPQVPGGAVRVAAAAGSGPSPPGSPGHDRERQP
Sbjct: 1 MDETSPLVSPERAQPPDYTFPSGSGAHFPQVPGGAVRVAAAAGSGPSPPGSPGHDRERQP 60
Query: 61 LLDRARGAAAQGQTQTVAAQAQALAAQAAAAAHAAQAHRERNEFPEDPEFEAVVRQAELA 120
LLDRARGAAAQGQTQTVAAQAQALAAQAAAAAHAAQAHRERNEFPEDPEFEAVVRQAELA
Sbjct: 61 LLDRARGAAAQGQTQTVAAQAQALAAQAAAAAHAAQAHRERNEFPEDPEFEAVVRQAELA 120
Query: 121 IERCIFPERIYQGSSGSYFVKDPQGRIIAVFKPKNEEPYGHLNPKWTKWLQKLCCPCCFG 180
IERCIFPERIYQGSSGSYFVKDPQGRIIAVFKPKNEEPYGHLNPKWTKWLQKLCCPCCFG
Sbjct: 121 IERCIFPERIYQGSSGSYFVKDPQGRIIAVFKPKNEEPYGHLNPKWTKWLQKLCCPCCFG 180
Query: 181 RDCLVLNQGYLSEAGASLVDQKLELNIVPRTKVVYLASETFNYSAIDRVKSRGKRLALEK 240
RDCLVLNQGYLSEAGASLVDQKLELNIVPRTKVVYLASETFNYSAIDRVKSRGKRLALEK
Sbjct: 181 RDCLVLNQGYLSEAGASLVDQKLELNIVPRTKVVYLASETFNYSAIDRVKSRGKRLALEK 240
Query: 241 VPKVGQRFNRIGLPPKVGSFQLFVEGYKDADYWLRRFEAEPLPENTNRQLLLQFERLVVL 300
VPKVGQRFNRIGLPPKVGSFQLFVEGYKDADYWLRRFEAEPLPENTNRQLLLQFERLVVL
Sbjct: 241 VPKVGQRFNRIGLPPKVGSFQLFVEGYKDADYWLRRFEAEPLPENTNRQLLLQFERLVVL 300
Query: 301 DYIIRNTDRGNDNWLIKYDCPMDSSSSRDTDWVVVKEPVIKVAAIDNGLAFPLKHPDSWR 360
DYIIRNTDRGNDNWLIKYDCPMDSSSSRDTDWVVVKEPVIKVAAIDNGLAFPLKHPDSWR
Sbjct: 301 DYIIRNTDRGNDNWLIKYDCPMDSSSSRDTDWVVVKEPVIKVAAIDNGLAFPLKHPDSWR 360
Query: 361 AYPFYWAWLPQAKVPFSQEIKDLILPKISDPNFVKDLEEDLYELFKKDPGFDRGQFHKQI 420
AYPFYWAWLPQAKVPFSQEIKDLILPKISDPNFVKDLEEDLYELFKKDPGFDRGQFHKQI
Sbjct: 361 AYPFYWAWLPQAKVPFSQEIKDLILPKISDPNFVKDLEEDLYELFKKDPGFDRGQFHKQI 420
Query: 421 AVMRGQILNLTQALKDNKSPLHLVQMPPVIVETARSHQRSSSESYTQSFQSRKPFFSWW 479
AVMRGQILNLTQALKDNKSPLHLVQMPPVIVETARSHQRSSSESYTQSFQSRKPFFSWW
Sbjct: 421 AVMRGQILNLTQALKDNKSPLHLVQMPPVIVETARSHQRSSSESYTQSFQSRKPFFSWW 479
>gi|224591401 phosphatidylinositol 4-kinase type 2 beta [Homo
sapiens]
Length = 481
Score = 560 bits (1443), Expect = e-159
Identities = 285/463 (61%), Positives = 341/463 (73%), Gaps = 39/463 (8%)
Query: 32 PGGAVRVAAAAGSG--------PSPPGSPGHDRERQPLLDRARGAAAQGQTQTVAAQAQA 83
PG AVR+ AAG P PPG G R LDR+R A + T+
Sbjct: 43 PGSAVRLLDAAGEEGEAGDEELPLPPGDVGVSRSSSAELDRSRPAVSV----TIGTS--- 95
Query: 84 LAAQAAAAAHAAQAHRERNEFPEDPEFEAVVRQAELAIERCIFPERIYQGSSGSYFVKDP 143
E N F +DPEF ++ +AE AIE IFPERI QGSSGSYFVKDP
Sbjct: 96 ----------------EMNAFLDDPEFADIMLRAEQAIEVGIFPERISQGSSGSYFVKDP 139
Query: 144 QGRIIAVFKPKNEEPYGHLNPKWTKWLQKLCCPCCFGRDCLVLNQGYLSEAGASLVDQKL 203
+ +II VFKPK+EEPYG LNPKWTK++ K+CCPCCFGR CL+ NQGYLSEAGA LVD KL
Sbjct: 140 KRKIIGVFKPKSEEPYGQLNPKWTKYVHKVCCPCCFGRGCLIPNQGYLSEAGAYLVDNKL 199
Query: 204 ELNIVPRTKVVYLASETFNYSAIDRVKSRGKRLALEKVPKVGQRFNRIGLPPKVGSFQLF 263
L+IVP+TKVV+L SETFNY+AIDR KSRGK+ ALEKVPKVG++F+RIGLPPK+GSFQLF
Sbjct: 200 HLSIVPKTKVVWLVSETFNYNAIDRAKSRGKKYALEKVPKVGRKFHRIGLPPKIGSFQLF 259
Query: 264 VEGYKDADYWLRRFEAEPLPENTNRQLLLQFERLVVLDYIIRNTDRGNDNWLIKYD---C 320
VEGYK+A+YWLR+FEA+PLPEN +Q QFERLV+LDYIIRNTDRGNDNWL++Y+ C
Sbjct: 260 VEGYKEAEYWLRKFEADPLPENIRKQFQSQFERLVILDYIIRNTDRGNDNWLVRYEKQKC 319
Query: 321 PMDSSSSRDTDWVVVKEPVIKVAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEI 380
+ +++ W+ +E +IK+AAIDNGLAFP KHPD WRAYPF+WAWLPQAKVPFS+EI
Sbjct: 320 EKE-IDHKESKWIDDEEFLIKIAAIDNGLAFPFKHPDEWRAYPFHWAWLPQAKVPFSEEI 378
Query: 381 KDLILPKISDPNFVKDLEEDLYELFKKDPGFDRGQFHKQIAVMRGQILNLTQALKDNKSP 440
++LILP ISD NFV+DL EDLYELFK D GFD+ F Q++VMRGQILNLTQAL+D KSP
Sbjct: 379 RNLILPYISDMNFVQDLCEDLYELFKTDKGFDKATFESQMSVMRGQILNLTQALRDGKSP 438
Query: 441 LHLVQMPPVIVETARSHQRSS----SESYTQSFQSRKPFFSWW 479
LVQ+P VIVE ++ + S S+TQ+ RKPFFS W
Sbjct: 439 FQLVQIPCVIVERSQGGSQGRIVHLSNSFTQTVNCRKPFFSSW 481
>gi|21264339 SRY (sex determining region Y)-box 12 [Homo sapiens]
Length = 315
Score = 38.9 bits (89), Expect = 0.010
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 27/128 (21%)
Query: 9 SPERAQPPDYTFPSGSGAHF-----PQVPGGAVRVAAAA--GSGPSPPGSPGHDRERQPL 61
+P +A+P P GSG PQ+PG R AA G G + P D + + L
Sbjct: 118 APAKARPRP---PGGSGGGSRLKPGPQLPGRGGRRAAGGPLGGGAAAPEDDDEDDDEELL 174
Query: 62 LDRA-------------RGAAAQGQTQTVAAQAQALAAQAAAAAHAAQAHRERNEFPEDP 108
R G AA+GQ A +AQ + + AAAA AA +E PE+
Sbjct: 175 EVRLVETPGRELWRMVPAGRAARGQ----AERAQGPSGEGAAAAAAASPTPSEDEEPEEE 230
Query: 109 EFEAVVRQ 116
E EA +
Sbjct: 231 EEEAAAAE 238
>gi|12707580 paired-like homeobox 2b [Homo sapiens]
Length = 314
Score = 37.0 bits (84), Expect = 0.040
Identities = 30/78 (38%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 19 TFPSGSGAHFPQV-PGGAVRVAAAAGSGPSPPGSPGHDRERQPLLDRARGAAAQGQTQTV 77
T P +G P P + G GPSP G+PG P + +G AA
Sbjct: 190 TDPDSTGGPGPNPNPTPSCGANGGGGGGPSPAGAPGAAGPGGPGGEPGKGGAA------- 242
Query: 78 AAQAQALAAQAAAAAHAA 95
AA A A AA AAAAA AA
Sbjct: 243 AAAAAAAAAAAAAAAAAA 260
>gi|239755739 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 36.2 bits (82), Expect = 0.068
Identities = 29/76 (38%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 34 GAVRVAAAAGSGPSPPGSPGHDRERQPLLDRARGA---AAQGQTQTVAAQAQALAAQAAA 90
G R AAG G PPG PG R Q R GA A+G AA+ A A A
Sbjct: 32 GLARAGLAAGKGQRPPG-PGRVRAAQARARRGGGARERPAEGARGPRAARGGARAG-PDA 89
Query: 91 AAHAAQAHRERNEFPE 106
AA+ HR R + P+
Sbjct: 90 QLRAARTHRARAQTPQ 105
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 35.4 bits (80), Expect = 0.12
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 11/63 (17%)
Query: 2 DETSPLVSPERAQPPDYTFPSGSGAH-----------FPQVPGGAVRVAAAAGSGPSPPG 50
D +PL P R QPP+ F +GS AH P P G + +G P+
Sbjct: 2461 DPFAPLHKPPRPQPPEVAFKAGSLAHTSLGAGGFPAALPAGPAGELHAKVPSGQPPNFVR 2520
Query: 51 SPG 53
SPG
Sbjct: 2521 SPG 2523
>gi|14149746 nuclear receptor subfamily 2, group F, member 2
isoform a [Homo sapiens]
Length = 414
Score = 34.7 bits (78), Expect = 0.20
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Query: 2 DETSPLVSPERAQPPDYTFPSGSGAHFPQVP---GGAVRVAAAAGSGPSPPGSPGHDRER 58
DE + +Q P P H PQ P G A A A G PG PG D+++
Sbjct: 13 DEVPGSQGSQASQAPPVPGPPPGAPHTPQTPGQGGPASTPAQTAAGGQGGPGGPGSDKQQ 72
Query: 59 Q 59
Q
Sbjct: 73 Q 73
>gi|239750250 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 34.7 bits (78), Expect = 0.20
Identities = 28/76 (36%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 34 GAVRVAAAAGSGPSPPGSPGHDRERQPLLDRARGA---AAQGQTQTVAAQAQALAAQAAA 90
G R A G G PPG PG R Q R GA A+G AA+ A A A
Sbjct: 32 GLARAGLATGKGQRPPG-PGRVRAAQARARRGGGARERPAEGARGPRAARGGARAG-PDA 89
Query: 91 AAHAAQAHRERNEFPE 106
AA+ HR R + P+
Sbjct: 90 QLRAARTHRARAQTPQ 105
>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
Length = 532
Score = 34.7 bits (78), Expect = 0.20
Identities = 28/82 (34%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Query: 18 YTFPSGSGAHFPQVPGGAVRVAAAAGSGPSPPGSPGHDRERQPLLDRARGAAAQGQTQTV 77
YT PS H V ++ GS SP S G++ P L + A Q +
Sbjct: 402 YTHPSSLRKHMK------VHESSPQGSESSPAASSGYESSTPPGLV-SPSAEPQSSSNLS 454
Query: 78 AAQAQALAAQAAAAAHAAQAHR 99
A A A AA AAAAA + HR
Sbjct: 455 PAAAAAAAAAAAAAAAVSAVHR 476
>gi|149408126 nemo like kinase [Homo sapiens]
Length = 527
Score = 34.7 bits (78), Expect = 0.20
Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 4/96 (4%)
Query: 15 PPDYTFPSGSGAHFP-QVPGGAVRVAAAAGSGPSPPGSPGHDRERQPLLDRARGAAAQGQ 73
P + P + A P Q + AAAA + + +PG ++QP A G
Sbjct: 49 PQHHLHPGSAAAVHPVQQHTSSAAAAAAAAAAAAAMLNPG---QQQPYFPSPAPGQAPGP 105
Query: 74 TQTVAAQAQALAAQAAAAAHAAQAHRERNEFPEDPE 109
AQ QA AA A H +H + + +P+
Sbjct: 106 AAAAPAQVQAAAAATVKAHHHQHSHHPQQQLDIEPD 141
>gi|7706435 headcase [Homo sapiens]
Length = 543
Score = 34.7 bits (78), Expect = 0.20
Identities = 31/73 (42%), Positives = 35/73 (47%), Gaps = 20/73 (27%)
Query: 33 GGAVRVAAAAGSGPSPPGSPGHDRERQPLLDRARGAAAQGQTQTVAAQAQALAAQAAAAA 92
GGA+ AAAAG G + G+PG A GAA G T AA A AAAA
Sbjct: 41 GGAL--AAAAGCGAAAAGAPG-----------AGGAAGAGGAGTGAANA-------AAAA 80
Query: 93 HAAQAHRERNEFP 105
AA A +NE P
Sbjct: 81 GAAAAGDAKNEAP 93
>gi|31442420 shroom family member 1 [Homo sapiens]
Length = 847
Score = 34.3 bits (77), Expect = 0.26
Identities = 34/100 (34%), Positives = 41/100 (41%), Gaps = 30/100 (30%)
Query: 37 RVAAAAGSGPSP---PGSPGH-DRERQPLLDRARGAAAQGQTQTVAAQAQALAAQAAAAA 92
R A AA SGP P PG+PG +R+ PLL ALAA+A AAA
Sbjct: 86 RPAVAARSGPQPTEVPGTPGPLNRQATPLL-------------------YALAAEAEAAA 126
Query: 93 HAAQAHRERNEFPEDPEFEAVVRQAELAIERCIFPERIYQ 132
A E P P A RQ +R + E +Q
Sbjct: 127 QAV-------EPPSPPASRAAYRQRLQGAQRRVLRETSFQ 159
>gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein
[Homo sapiens]
Length = 593
Score = 33.5 bits (75), Expect = 0.44
Identities = 35/100 (35%), Positives = 48/100 (48%), Gaps = 13/100 (13%)
Query: 22 SGSGAH----FPQVPGGAVRVAAAAGSGPSPPGSPGHDRERQ---PLLDRARGAAAQGQT 74
S GAH P++P ++ +AA+ +G S +P +E P+ R +
Sbjct: 362 SPGGAHGMLSSPKLPVSSLGLAAST-NGSSITPAPKIKKEEDSAIPITVPGRLPVSLAGH 420
Query: 75 QTVAAQAQALAAQAAAAAHAAQAH-----RERNEFPEDPE 109
VAAQA A+ A AA AA AAQA RE+ E E PE
Sbjct: 421 PVVAAQAAAVQAAAAQAAVAAQAAALEQLREKLESAEPPE 460
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 33.1 bits (74), Expect = 0.57
Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 4 TSPLVSPERAQPPDYTFPSGSGAHFP-QVPGGAVRVAAAAGSGPSPP--GSPGHDRERQP 60
T P + A+PP P H P + P A AAAA + P+PP SPG D RQ
Sbjct: 1317 TPPSLGASPAKPPS---PGAPALHVPAKPPRAAAAAAAAAAAPPAPPEGASPG-DSARQK 1372
Query: 61 LLDRARGAAA 70
L + + AA
Sbjct: 1373 LEETSACLAA 1382
Score = 30.4 bits (67), Expect = 3.7
Identities = 36/105 (34%), Positives = 41/105 (39%), Gaps = 17/105 (16%)
Query: 4 TSPLVSPERAQPPDYT--------FPSGSGAHFPQVPGGAVRVAAAAGSGPSPPGSPGHD 55
T P VSP+ PP PSGS P P A + AA P P S G
Sbjct: 1266 TPPPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSP-APSPARQPPAALAKPPGTPPSLGAS 1324
Query: 56 RERQPLLDRARGAAAQGQTQTVAAQAQALAAQAAAAAHAAQAHRE 100
+ P + GA A V A+ AA AAAAA A A E
Sbjct: 1325 PAKPP----SPGAPA----LHVPAKPPRAAAAAAAAAAAPPAPPE 1361
>gi|32490572 erythrocyte membrane protein band 4.1-like 3 [Homo
sapiens]
Length = 1087
Score = 33.1 bits (74), Expect = 0.57
Identities = 33/112 (29%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 44 SGPSPPGSPGHDRERQPLLDRARGAAAQGQTQTVAAQAQALAAQAAAAAHAAQAHRERNE 103
SG P + E Q A A Q QAL AAAAAH+ RE
Sbjct: 5 SGSDSESKPDQEAEPQEAAGAQGRAGAPVPEPPKEEQQQALEQFAAAAAHSTPVRRE--- 61
Query: 104 FPEDPEFEAVVRQAELAIERCIFPERIYQGSSGSYFVKDPQGRIIAVFKPKN 155
D E E R A+ + + +++ Q SS S + P + V KPK+
Sbjct: 62 -VTDKEQEFAARAAKQLEYQQLEDDKLSQKSSSSKLSRSP---LKIVKKPKS 109
>gi|157426823 NK2 homeobox 4 [Homo sapiens]
Length = 354
Score = 33.1 bits (74), Expect = 0.57
Identities = 29/94 (30%), Positives = 37/94 (39%), Gaps = 10/94 (10%)
Query: 4 TSPLVSPERAQPPDYTFPSGSGAHFPQVPGGAVRVAAAAGSGPSPPGSPGHDRERQPLLD 63
T+P + P + T+ SGA PG + AAA PPG
Sbjct: 8 TTPFSVSDILSPIEETYKKFSGAMDGAPPGLGAPLGAAAAYRAPPPGPS----------S 57
Query: 64 RARGAAAQGQTQTVAAQAQALAAQAAAAAHAAQA 97
+A A + +A A AA AAAAA AA A
Sbjct: 58 QAATVAGMQPSHAMAGHNAAAAAAAAAAAAAAAA 91
>gi|154759257 DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Homo
sapiens]
Length = 666
Score = 33.1 bits (74), Expect = 0.57
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 40 AAAGSGPSPPGSPGHDRERQPLLDRARGAAAQGQTQTVAAQAQALAAQAAAAAHAAQAHR 99
AAA +GP + H R R LL+R + A + Q Q AQ +A A+ A + R
Sbjct: 14 AAAAAGPEGAEAGAHGRAR-ALLERLQSRARERQQQREPAQTEAAASTEPATRRRRRPRR 72
Query: 100 ERNEFPEDP 108
R +P
Sbjct: 73 RRRVNDAEP 81
>gi|71274109 nuclear factor of kappa light polypeptide gene enhancer
in B-cells inhibitor, epsilon [Homo sapiens]
Length = 500
Score = 32.7 bits (73), Expect = 0.75
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 14/116 (12%)
Query: 12 RAQPPDYTFPSGSGA------HFPQVPGG----AVRVAAAAGSGPSPPGSPGH--DRERQ 59
R + P ++ +G G P V G A+R ++ +GPS P SPG R +
Sbjct: 47 RVRRPCWSGGAGRGGGPAWAVRLPTVTAGWTWPALRTLSSLRAGPSEPHSPGRRPPRAGR 106
Query: 60 PL--LDRARGAAAQGQTQTVAAQAQALAAQAAAAAHAAQAHRERNEFPEDPEFEAV 113
PL D G AA+ + AQ A+AA + A + E E D E++
Sbjct: 107 PLCQADPQPGKAARRSLEPDPAQTGPRPARAAGMSEARKGPDEAEESQYDSGIESL 162
>gi|239749693 PREDICTED: similar to hCG1806822 [Homo sapiens]
Length = 1180
Score = 32.7 bits (73), Expect = 0.75
Identities = 27/69 (39%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Query: 43 GSGPSPPGSPGHDRER----QPLLDRARGAAAQGQTQTVAAQAQALA--AQAAAAAHAAQ 96
G GP P H R +P R+RGAA + ++ VAA A A AAA AAQ
Sbjct: 1063 GPGPRGPSLRSHPRSGPCAGKPRAPRSRGAA-EPPSRRVAAPGVGTAGGANKAAATRAAQ 1121
Query: 97 AHRERNEFP 105
A R+E P
Sbjct: 1122 ARDARSERP 1130
>gi|239746609 PREDICTED: hypothetical protein XP_002343799 [Homo
sapiens]
Length = 245
Score = 32.7 bits (73), Expect = 0.75
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 1 MDETSPLVSPERAQPPDYTFPSGSGAHFPQVPGGAVRVAAAAGSGPSPPGSPGHDRERQP 60
+D+ + + R +PP P G G+H+ PG R+ S PG P R +P
Sbjct: 123 LDQAATRIPAARPRPPG---PGGRGSHWKIQPG-VQRLPRPTPSAQPRPGPPERRRASRP 178
Query: 61 LLDRARG 67
L+ RG
Sbjct: 179 LIGCGRG 185
>gi|7662236 TSC22 domain family, member 2 [Homo sapiens]
Length = 780
Score = 32.7 bits (73), Expect = 0.75
Identities = 33/105 (31%), Positives = 40/105 (38%), Gaps = 11/105 (10%)
Query: 5 SPLVSPERAQPPDYTFPSGSGAHFPQVPGGAVRVAAAAGSGPSPPGSPGHDRERQPLLDR 64
S L E+ P P PQ P V A A S P PP PG QP++
Sbjct: 250 SQLPPSEKMSQPTPAQPQSFSVGQPQPPPPPVGGAVAQSSAPLPP-FPGAATGPQPMMAA 308
Query: 65 A-----RGAAAQGQT-----QTVAAQAQALAAQAAAAAHAAQAHR 99
A +GA GQT T+A A +L Q A A A +
Sbjct: 309 AQPSQPQGAGPGGQTLPPTNVTLAQPAMSLPPQPGPAVGAPAAQQ 353
>gi|20127580 BTB (POZ) domain containing 2 [Homo sapiens]
Length = 525
Score = 32.7 bits (73), Expect = 0.75
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 21 PSGSGAHFPQVPGGAVRVAAAAGS-----GPSPPGSPGHDRERQPL-LDRARGAAAQG 72
PS + A P PG A AAAA + GP+PP PG + Q +RA AA G
Sbjct: 28 PSANAAATP-APGNAAAAAAAAAAAAAAPGPTPPAPPGPGTDAQAAGAERAEEAAGPG 84
>gi|115334682 SNAP25-interacting protein [Homo sapiens]
Length = 1183
Score = 32.7 bits (73), Expect = 0.75
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 8/103 (7%)
Query: 10 PERAQPPDYTF--PSGSGAHFPQVPGGAVRVAAAAGSGPSPPGS--PGHDRERQPLLDRA 65
P R P +F SGS + F + PGG R A +A + +PP PG ER +
Sbjct: 499 PSRGSPVRQSFRKDSGSSSVFAESPGGKTRSAGSASTAGAPPSELFPG-PGERSLV---G 554
Query: 66 RGAAAQGQTQTVAAQAQALAAQAAAAAHAAQAHRERNEFPEDP 108
G + + +A+ Q A+ Q+ R PE P
Sbjct: 555 FGPPVPAKDTETRERMEAMEKQIASLTGLVQSALLRGSEPETP 597
>gi|148229134 ring finger and KH domain containing 2 [Homo sapiens]
Length = 659
Score = 32.7 bits (73), Expect = 0.75
Identities = 30/80 (37%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 46 PSPPGSPGHDRERQPLLDRARGAAAQGQTQTVAAQAQALAAQAAAAAHAAQAHRERNEFP 105
P PP S G + E LL R R AA G A+ A A +A AAA QA R P
Sbjct: 31 PLPPPSGGPELEGDGLLLRER-LAALGLDDPSPAEPGAPALRAPAAAAQGQARRAAELSP 89
Query: 106 ED---PEFEAVVRQAELAIE 122
E+ P AEL +E
Sbjct: 90 EERAPPGRPGAPEAAELELE 109
Score = 29.6 bits (65), Expect = 6.3
Identities = 32/106 (30%), Positives = 40/106 (37%), Gaps = 17/106 (16%)
Query: 10 PERAQPPDYTFPSGSGAHFPQVPGGAV----RVAAAAGSGPSP--PGSPGHDRERQPLLD 63
P PP P SG P++ G + R+AA PSP PG+P
Sbjct: 22 PPPPPPPPPPLPPPSGG--PELEGDGLLLRERLAALGLDDPSPAEPGAPAL--------- 70
Query: 64 RARGAAAQGQTQTVAAQAQALAAQAAAAAHAAQAHRERNEFPEDPE 109
RA AAAQGQ + A + A A E E E+ E
Sbjct: 71 RAPAAAAQGQARRAAELSPEERAPPGRPGAPEAAELELEEDEEEGE 116
>gi|65786661 BTB (POZ) domain containing 11 isoform a [Homo sapiens]
Length = 1104
Score = 32.7 bits (73), Expect = 0.75
Identities = 31/89 (34%), Positives = 38/89 (42%), Gaps = 13/89 (14%)
Query: 31 VPGGAVRVAAAAGSGPSPPGSPG----HDRERQ-PLLDRARGAA------AQGQTQTVAA 79
VP + +GSGP P PG D+ER+ P A G A A G + A
Sbjct: 257 VPRSCSGPGSGSGSGPGPSSGPGAAPAADKEREAPGGGAASGGACSAASSASGGSSCCAP 316
Query: 80 QAQALAA--QAAAAAHAAQAHRERNEFPE 106
A A AA AAAA H H +E P+
Sbjct: 317 PAAAAAAVPPAAAANHHHHHHHALHEAPK 345
>gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens]
Length = 1603
Score = 32.7 bits (73), Expect = 0.75
Identities = 21/73 (28%), Positives = 26/73 (35%), Gaps = 4/73 (5%)
Query: 4 TSPLVSPERAQPPDYTFPSGSGAHFPQVPGGAVRVAAAAGSGPSPPGSPGHDRERQPLLD 63
T P + A D +F GSG P P A +AG P P G P +
Sbjct: 984 TKPFTGQDCANSKDCSFAYGSGNSLPASPSS----AHSAGYAPPPTGGPCLPPSKASFFS 1039
Query: 64 RARGAAAQGQTQT 76
+ GA G T
Sbjct: 1040 SSEGAPFSGSAPT 1052
>gi|239753144 PREDICTED: hypothetical protein [Homo sapiens]
Length = 407
Score = 32.3 bits (72), Expect = 0.97
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 33 GGAVRVAAAAGSGPSPPGSPGHDRERQPLLDRARGAAAQGQTQTVAAQAQALAAQAAAAA 92
G V VAAA G G GHD +R + + A AAA Q +A AQ +A + AAA
Sbjct: 214 GVVVAVAAAETHGTHDVGH-GHDGQRPRVEEGAVRAAAHQQRHQLARLAQHVALEDLAAA 272
Query: 93 HAAQ 96
A+
Sbjct: 273 RLAR 276
>gi|239747710 PREDICTED: hypothetical protein XP_002348232 [Homo
sapiens]
Length = 407
Score = 32.3 bits (72), Expect = 0.97
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 33 GGAVRVAAAAGSGPSPPGSPGHDRERQPLLDRARGAAAQGQTQTVAAQAQALAAQAAAAA 92
G V VAAA G G GHD +R + + A AAA Q +A AQ +A + AAA
Sbjct: 214 GVVVAVAAAETHGTHDVGH-GHDGQRPRVEEGAVRAAAHQQRHQLARLAQHVALEDLAAA 272
Query: 93 HAAQ 96
A+
Sbjct: 273 RLAR 276
>gi|239741576 PREDICTED: hypothetical protein XP_002342255 [Homo
sapiens]
Length = 407
Score = 32.3 bits (72), Expect = 0.97
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 33 GGAVRVAAAAGSGPSPPGSPGHDRERQPLLDRARGAAAQGQTQTVAAQAQALAAQAAAAA 92
G V VAAA G G GHD +R + + A AAA Q +A AQ +A + AAA
Sbjct: 214 GVVVAVAAAETHGTHDVGH-GHDGQRPRVEEGAVRAAAHQQRHQLARLAQHVALEDLAAA 272
Query: 93 HAAQ 96
A+
Sbjct: 273 RLAR 276
>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
sapiens]
Length = 1336
Score = 32.3 bits (72), Expect = 0.97
Identities = 31/107 (28%), Positives = 35/107 (32%), Gaps = 23/107 (21%)
Query: 6 PLVSPERAQPPDYTF----------PSGSGAHFPQVPGGAVRVAAAAG-----------S 44
P P + PP Y P+G+ FP P A A G S
Sbjct: 995 PAAQPPQKPPPSYFAIVRDKEPAEPPAGAFPGFPSPPAPPAAAATAVGPPLCRLAFEDES 1054
Query: 45 GPSPPGSPGHDRERQPLLDRARGAAAQGQTQTVAAQAQALAAQAAAA 91
P+P P D E QPLL GA G T A A AA
Sbjct: 1055 PPAPARWPRSDPESQPLL--GPGAGGAGGTGGAGGGAPAAPPPCRAA 1099
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,376,803
Number of Sequences: 37866
Number of extensions: 1016121
Number of successful extensions: 5216
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 119
Number of HSP's that attempted gapping in prelim test: 4986
Number of HSP's gapped (non-prelim): 309
length of query: 479
length of database: 18,247,518
effective HSP length: 106
effective length of query: 373
effective length of database: 14,233,722
effective search space: 5309178306
effective search space used: 5309178306
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.