Search of human proteins with 13540555

Search of human proteins with 13540555

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|13540555 phosphatidylserine synthase 2 [Homo sapiens]
         (487 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|13540555 phosphatidylserine synthase 2 [Homo sapiens]             1045   0.0  
gi|7662647 phosphatidylserine synthase 1 [Homo sapiens]               235   6e-62
gi|149588928 SLAIN motif family, member 2 [Homo sapiens]               34   0.26 
gi|153792074 proline rich 12 [Homo sapiens]                            33   0.58 
gi|154759257 DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Homo sap...    33   0.76 
gi|145309320 forkhead box Q1 [Homo sapiens]                            32   1.3  
gi|42560248 POU domain, class 5, transcription factor 1 isoform ...    31   2.2  
gi|239750101 PREDICTED: hypothetical protein [Homo sapiens]            31   2.2  
gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens]     31   2.9  
gi|38788219 zinc finger protein 428 [Homo sapiens]                     30   3.8  
gi|239757686 PREDICTED: hypothetical protein [Homo sapiens]            30   3.8  
gi|239752176 PREDICTED: hypothetical protein [Homo sapiens]            30   3.8  
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]     30   3.8  
gi|110431370 espin [Homo sapiens]                                      30   3.8  
gi|7662494 Kruppel-like factor 15 [Homo sapiens]                       30   3.8  
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    30   4.9  
gi|169209134 PREDICTED: hypothetical protein [Homo sapiens]            30   4.9  
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    30   4.9  
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    30   4.9  
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo...    30   4.9  
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ...    30   4.9  
gi|28557751 olfactory receptor, family 2, subfamily L, member 13...    30   4.9  
gi|145701009 acetylcholinesterase collagen-like tail subunit iso...    30   6.5  
gi|18105018 acetylcholinesterase collagen-like tail subunit isof...    30   6.5  
gi|18105016 acetylcholinesterase collagen-like tail subunit isof...    30   6.5  
gi|120659785 protein kinase D2 isoform A [Homo sapiens]                30   6.5  
gi|120659782 protein kinase D2 isoform A [Homo sapiens]                30   6.5  
gi|19923468 protein kinase D2 isoform A [Homo sapiens]                 30   6.5  
gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens]         30   6.5  
gi|42476272 zinc finger protein 513 [Homo sapiens]                     30   6.5  

>gi|13540555 phosphatidylserine synthase 2 [Homo sapiens]
          Length = 487

 Score = 1045 bits (2702), Expect = 0.0
 Identities = 487/487 (100%), Positives = 487/487 (100%)

Query: 1   MRRGERRDAGGPRPESPVPAGRASLEEPPDGPSAGQATGPGEGRRSTESEVYDDGTNTFF 60
           MRRGERRDAGGPRPESPVPAGRASLEEPPDGPSAGQATGPGEGRRSTESEVYDDGTNTFF
Sbjct: 1   MRRGERRDAGGPRPESPVPAGRASLEEPPDGPSAGQATGPGEGRRSTESEVYDDGTNTFF 60

Query: 61  WRAHTLTVLFILTCTLGYVTLLEETPQDTAYNTKRGIVASILVFLCFGVTQAKDGPFSRP 120
           WRAHTLTVLFILTCTLGYVTLLEETPQDTAYNTKRGIVASILVFLCFGVTQAKDGPFSRP
Sbjct: 61  WRAHTLTVLFILTCTLGYVTLLEETPQDTAYNTKRGIVASILVFLCFGVTQAKDGPFSRP 120

Query: 121 HPAYWRFWLCVSVVYELFLIFILFQTVQDGRQFLKYVDPKLGVPLPERDYGGNCLIYDPD 180
           HPAYWRFWLCVSVVYELFLIFILFQTVQDGRQFLKYVDPKLGVPLPERDYGGNCLIYDPD
Sbjct: 121 HPAYWRFWLCVSVVYELFLIFILFQTVQDGRQFLKYVDPKLGVPLPERDYGGNCLIYDPD 180

Query: 181 NETDPFHNIWDKLDGFVPAHFLGWYLKTLMIRDWWMCMIISVMFEFLEYSLEHQLPNFSE 240
           NETDPFHNIWDKLDGFVPAHFLGWYLKTLMIRDWWMCMIISVMFEFLEYSLEHQLPNFSE
Sbjct: 181 NETDPFHNIWDKLDGFVPAHFLGWYLKTLMIRDWWMCMIISVMFEFLEYSLEHQLPNFSE 240

Query: 241 CWWDHWIMDVLVCNGLGIYCGMKTLEWLSLKTYKWQGLWNIPTYKGKMKRIAFQFTPYSW 300
           CWWDHWIMDVLVCNGLGIYCGMKTLEWLSLKTYKWQGLWNIPTYKGKMKRIAFQFTPYSW
Sbjct: 241 CWWDHWIMDVLVCNGLGIYCGMKTLEWLSLKTYKWQGLWNIPTYKGKMKRIAFQFTPYSW 300

Query: 301 VRFEWKPASSLRRWLAVCGIILVFLLAELNTFYLKFVLWMPPEHYLVLLRLVFFVNVGGV 360
           VRFEWKPASSLRRWLAVCGIILVFLLAELNTFYLKFVLWMPPEHYLVLLRLVFFVNVGGV
Sbjct: 301 VRFEWKPASSLRRWLAVCGIILVFLLAELNTFYLKFVLWMPPEHYLVLLRLVFFVNVGGV 360

Query: 361 AMREIYDFMDDPKPHKKLGPQAWLVAAITATELLIVVKYDPHTLTLSLPFYISQCWTLGS 420
           AMREIYDFMDDPKPHKKLGPQAWLVAAITATELLIVVKYDPHTLTLSLPFYISQCWTLGS
Sbjct: 361 AMREIYDFMDDPKPHKKLGPQAWLVAAITATELLIVVKYDPHTLTLSLPFYISQCWTLGS 420

Query: 421 VLALTWTVWRFFLRDITLRYKETRWQKWQNKDDQGSTVGNGDQHPLGLDEDLLGPGVAEG 480
           VLALTWTVWRFFLRDITLRYKETRWQKWQNKDDQGSTVGNGDQHPLGLDEDLLGPGVAEG
Sbjct: 421 VLALTWTVWRFFLRDITLRYKETRWQKWQNKDDQGSTVGNGDQHPLGLDEDLLGPGVAEG 480

Query: 481 EGAPTPN 487
           EGAPTPN
Sbjct: 481 EGAPTPN 487


>gi|7662647 phosphatidylserine synthase 1 [Homo sapiens]
          Length = 473

 Score =  235 bits (600), Expect = 6e-62
 Identities = 134/394 (34%), Positives = 200/394 (50%), Gaps = 20/394 (5%)

Query: 45  RSTESEVYDDGTNTFFWRAHTLTVLFILTCTLGYVTLLEE--TPQDTAYNTKRGIVASIL 102
           R    +  +D T  FF+R HT+T+L     +L Y     +   P+D   N  RGI++ I 
Sbjct: 22  RMINEQQVEDITIDFFYRPHTITLLSFTIVSLMYFAFTRDDSVPED---NIWRGILSVIF 78

Query: 103 VFLCFGVTQAKDGPFSRPHPAYWRFWLCVSVVYELFLIFILFQTVQDGRQFLKYVDPKLG 162
            FL   V    +GPF+RPHPA WR    +SV+Y LFL+F+LF   +  +  + ++DP L 
Sbjct: 79  FFLIISVLAFPNGPFTRPHPALWRMVFGLSVLYFLFLVFLLFLNFEQVKSLMYWLDPNLR 138

Query: 163 VPLPERD---YGGNCLIYDPDNETDPFHNIWDKLDGFVPAHFLGWYLKTLMIRDWWMCMI 219
               E D   Y  NC +         +  I    D F   HF GW +K L+IR + +C  
Sbjct: 139 YATREADVMEYAVNCHVIT-------WERIISHFDIFAFGHFWGWAMKALLIRSYGLCWT 191

Query: 220 ISVMFEFLEYSLEHQLPNFSECWWDHWIMDVLVCNGLGIYCGMKTLEWLSLKTYKWQGLW 279
           IS+ +E  E    H LPNF+ECWWD  I+D+L+CNG GI+ GM    +L ++TY W    
Sbjct: 192 ISITWELTELFFMHLLPNFAECWWDQVILDILLCNGGGIWLGMVVCRFLEMRTYHWASFK 251

Query: 280 NIPTYKGKMKRIAFQFTPYSWVRFEW-KPASSLRRWLAVCGIILVFLLAELNTFYLKFVL 338
           +I T  GK+KR   QFTP SW    W  P SS +R   V   ++++ L ELNTF+LK + 
Sbjct: 252 DIHTTTGKIKRAVLQFTPASWTYVRWFDPKSSFQRVAGVYLFMIIWQLTELNTFFLKHIF 311

Query: 339 WMPPEHYLVLLRLVFFVNVGGVAMREIYDFMDDPKPHKKLGPQAWLVAAITATELLIVVK 398
                H L   R++F   +    +R+ Y ++ D +  K++G Q W+   I   E ++ +K
Sbjct: 312 VFQASHPLSWGRILFIGGITAPTVRQYYAYLTDTQ-CKRVGTQCWVFGVIGFLEAIVCIK 370

Query: 399 YDPHTLTLSLPFYI---SQCWTLGSVLALTWTVW 429
           +     + +   Y+     C    + L L   +W
Sbjct: 371 FGQDLFSKTQILYVVLWLLCVAFTTFLCLYGMIW 404


>gi|149588928 SLAIN motif family, member 2 [Homo sapiens]
          Length = 581

 Score = 34.3 bits (77), Expect = 0.26
 Identities = 26/63 (41%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 2  RRGERRDAGGPRPESPVPAGR-------ASLEEPPDGPSAGQATGPGEGRRSTESEVYDD 54
          R G  + AG   P SPV AG        AS    P G SA    GPG G R T SE   D
Sbjct: 34 RSGAVQGAGSLGPGSPVRAGASIPSSGAASPRGFPLGLSAKSGGGPGSGPRRTSSEELRD 93

Query: 55 GTN 57
           T+
Sbjct: 94 ATS 96


>gi|153792074 proline rich 12 [Homo sapiens]
          Length = 2036

 Score = 33.1 bits (74), Expect = 0.58
 Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 3/51 (5%)

Query: 2    RRGERRDAGGPRP---ESPVPAGRASLEEPPDGPSAGQATGPGEGRRSTES 49
            R G  R  G PR    E P  AG AS   P DG    +  G G GR++ E+
Sbjct: 1164 RDGPPRPRGRPRIRPLEVPTTAGPASASTPTDGAKKPRGRGRGRGRKAEEA 1214


>gi|154759257 DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Homo
           sapiens]
          Length = 666

 Score = 32.7 bits (73), Expect = 0.76
 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 2/56 (3%)

Query: 2   RRGERRDAGGP-RPESPVPAGRASLEEPPDGPSAGQAT-GPGEGRRSTESEVYDDG 55
           R+ +  DAG     E+P      S EE P  PSAG +   PGE   S  +E   DG
Sbjct: 92  RKADGEDAGAESNEEAPGEPSAGSSEEAPGEPSAGSSEEAPGERSTSASAEAAPDG 147


>gi|145309320 forkhead box Q1 [Homo sapiens]
          Length = 403

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 7/49 (14%)

Query: 4   GERRDAGGPRPESPVPAGRAS------LEEPPDGPSAGQATGPGEGRRS 46
           GE+   GGP  E  +PA  A+       E    GP AG A G GEG RS
Sbjct: 64  GEQSAGGGPGAEEAIPAAAAAAVVAEGAEAGAAGPGAGGA-GSGEGARS 111


>gi|42560248 POU domain, class 5, transcription factor 1 isoform 1
          [Homo sapiens]
          Length = 360

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 14/32 (43%), Positives = 15/32 (46%)

Query: 10 GGPRPESPVPAGRASLEEPPDGPSAGQATGPG 41
          GGP P    P    S + PP GP  G   GPG
Sbjct: 23 GGPEPGWVDPRTWLSFQGPPGGPGIGPGVGPG 54


>gi|239750101 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 365

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 4/44 (9%)

Query: 3   RGERRDAGGPRPESPVPAGRASLEEPPDGPSAGQATGPGEGRRS 46
           RGE R A    P  P PA R     PP  P+ G    P  GRRS
Sbjct: 304 RGEPRPAEPRAPPRPPPAAR----RPPPPPAPGAPARPLRGRRS 343


>gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens]
          Length = 1669

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 14/30 (46%), Positives = 16/30 (53%)

Query: 3   RGERRDAGGPRPESPVPAGRASLEEPPDGP 32
           RGE+ D G P    P P+GR  L  PP  P
Sbjct: 390 RGEKGDRGFPGTSLPGPSGRDGLPGPPGSP 419


>gi|38788219 zinc finger protein 428 [Homo sapiens]
          Length = 188

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 3/42 (7%)

Query: 15  ESPVPAGRASLEEPPDGPSAGQATGPGEGRRSTESEVYDDGT 56
           E+P P GRA  EE  + P AG+    G   R  E E  ++GT
Sbjct: 122 EAPAPEGRALGEEEEEPPRAGEGRPAG---REEEEEEEEEGT 160


>gi|239757686 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 140

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 14/29 (48%), Positives = 17/29 (58%)

Query: 1   MRRGERRDAGGPRPESPVPAGRASLEEPP 29
           +RRGER  A GP    P P   ++LE PP
Sbjct: 110 LRRGEREAAAGPPQAPPQPFQVSNLEAPP 138


>gi|239752176 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 140

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 14/29 (48%), Positives = 17/29 (58%)

Query: 1   MRRGERRDAGGPRPESPVPAGRASLEEPP 29
           +RRGER  A GP    P P   ++LE PP
Sbjct: 110 LRRGEREAAAGPPQAPPQPFQVSNLEAPP 138


>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
          Length = 2285

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 3/54 (5%)

Query: 5    ERRDAGGPRPESPVPAGRASLEEPPDGPSAGQATGPG--EGRRSTESEVYDDGT 56
            ERR AGGP+ + P   GR  +  PP G +A Q   P    G     +EV   GT
Sbjct: 1444 ERRPAGGPQNQFPFQFGRDRVSAPP-GTNAQQNMPPQMMGGPIQASAEVAQQGT 1496


>gi|110431370 espin [Homo sapiens]
          Length = 854

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 7   RDAGGPRPESPVPAGRASLEEPPDGPSAGQATGPGEGRRSTES 49
           R+   P P  P P   A+   PP  P   ++ GPG G+R + S
Sbjct: 593 RELPPPPPPPPPPLPEAASSPPPAPPLPLESAGPGCGQRRSSS 635


>gi|7662494 Kruppel-like factor 15 [Homo sapiens]
          Length = 416

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 14/27 (51%), Positives = 15/27 (55%)

Query: 17  PVPAGRASLEEPPDGPSAGQATGPGEG 43
           P  +GR     PP G SAG A GPG G
Sbjct: 184 PGSSGRERCSPPPGGASAGGAQGPGGG 210


>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 855

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 8/60 (13%)

Query: 4   GERRDAGGPRPESPVPA----GRASLEE---PPDGPSAGQATGPGEGRRSTESEVYDDGT 56
           G RRD  GP P +P PA     RA+  E   P   PSA +   P EG R + S   +  T
Sbjct: 159 GARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSA-RPRPPTEGPRKSVSSASEHST 217


>gi|169209134 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 107

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 3  RGERRDAGGPRPESPVPAGRASLEEPPDGPSAGQATGPG 41
          +G+ +  G  RPE P P G  S++  P+ P+A  A  PG
Sbjct: 4  KGDAQGGGVRRPEVPAPPGDPSVQPAPETPAA-PAPPPG 41


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 1124

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 8/60 (13%)

Query: 4   GERRDAGGPRPESPVPA----GRASLEE---PPDGPSAGQATGPGEGRRSTESEVYDDGT 56
           G RRD  GP P +P PA     RA+  E   P   PSA +   P EG R + S   +  T
Sbjct: 159 GARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSA-RPRPPTEGPRKSVSSASEHST 217


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 8/60 (13%)

Query: 4   GERRDAGGPRPESPVPA----GRASLEE---PPDGPSAGQATGPGEGRRSTESEVYDDGT 56
           G RRD  GP P +P PA     RA+  E   P   PSA +   P EG R + S   +  T
Sbjct: 150 GARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSA-RPRPPTEGPRKSVSSASEHST 208


>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 9/48 (18%)

Query: 8   DAGGPRPESPVPAGRASLEE---PPDG------PSAGQATGPGEGRRS 46
           D+GG RP    P GR++  +   PP G      PS G  +GP E +R+
Sbjct: 120 DSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRN 167


>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 9/48 (18%)

Query: 8   DAGGPRPESPVPAGRASLEE---PPDG------PSAGQATGPGEGRRS 46
           D+GG RP    P GR++  +   PP G      PS G  +GP E +R+
Sbjct: 120 DSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRN 167


>gi|28557751 olfactory receptor, family 2, subfamily L, member 13
           [Homo sapiens]
          Length = 312

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 22/135 (16%)

Query: 317 VCGIILVFLLAELNTFYLKFVLWMPPEHY------LVLLRLVFFVNVGGVAMREIYDFMD 370
           +C IIL+F LA +    +  ++ + P  +      L  L L+  + +     +  Y+F+ 
Sbjct: 27  LCLIILIFFLASVGNSAMIHLIHVDPRLHTPMYFLLSQLSLMDLMYISTTVPKMAYNFLS 86

Query: 371 DPKPHKKLG--PQAWLVAAITATE--LLIVVKYDPHTLTLSLPFY------------ISQ 414
             K    LG   Q++    +  +E  LL  + YD +       +Y            I  
Sbjct: 87  GQKGISFLGCGVQSFFFLTMACSEGLLLTSMAYDRYLAICHSLYYPIRMSKMMCVKMIGG 146

Query: 415 CWTLGSVLALTWTVW 429
            WTLGS+ +L  TV+
Sbjct: 147 SWTLGSINSLAHTVF 161


>gi|145701009 acetylcholinesterase collagen-like tail subunit
           isoform III precursor [Homo sapiens]
          Length = 421

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)

Query: 2   RRGERRDAG--GPRPESPVPAGRASLEEPPDGPSAGQATGPGEGRR 45
           ++G++ D+G  GP P  P P+G+     PP  P AGQ     +G R
Sbjct: 204 KQGQKGDSGVMGP-PGKPGPSGQPGRPGPPGPPPAGQLIMGPKGER 248


>gi|18105018 acetylcholinesterase collagen-like tail subunit isoform
           II [Homo sapiens]
          Length = 445

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)

Query: 2   RRGERRDAG--GPRPESPVPAGRASLEEPPDGPSAGQATGPGEGRR 45
           ++G++ D+G  GP P  P P+G+     PP  P AGQ     +G R
Sbjct: 228 KQGQKGDSGVMGP-PGKPGPSGQPGRPGPPGPPPAGQLIMGPKGER 272


>gi|18105016 acetylcholinesterase collagen-like tail subunit isoform
           I precursor [Homo sapiens]
          Length = 455

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)

Query: 2   RRGERRDAG--GPRPESPVPAGRASLEEPPDGPSAGQATGPGEGRR 45
           ++G++ D+G  GP P  P P+G+     PP  P AGQ     +G R
Sbjct: 238 KQGQKGDSGVMGP-PGKPGPSGQPGRPGPPGPPPAGQLIMGPKGER 282


>gi|120659785 protein kinase D2 isoform A [Homo sapiens]
          Length = 878

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 2/34 (5%)

Query: 10 GGPRPESPVPAGRASLEEPPDGPSAGQATGPGEG 43
          G P P SP P G   L+ PP  P   Q   PG G
Sbjct: 13 GSPGPGSPPPPGGLELQSPP--PLLPQIPAPGSG 44


>gi|120659782 protein kinase D2 isoform A [Homo sapiens]
          Length = 878

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 2/34 (5%)

Query: 10 GGPRPESPVPAGRASLEEPPDGPSAGQATGPGEG 43
          G P P SP P G   L+ PP  P   Q   PG G
Sbjct: 13 GSPGPGSPPPPGGLELQSPP--PLLPQIPAPGSG 44


>gi|19923468 protein kinase D2 isoform A [Homo sapiens]
          Length = 878

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 2/34 (5%)

Query: 10 GGPRPESPVPAGRASLEEPPDGPSAGQATGPGEG 43
          G P P SP P G   L+ PP  P   Q   PG G
Sbjct: 13 GSPGPGSPPPPGGLELQSPP--PLLPQIPAPGSG 44


>gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens]
          Length = 1690

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 3/53 (5%)

Query: 3    RGERRDAGGPRPESPVPAGRASLEEPPDGPSAGQATGPGEGRRSTESEVYDDG 55
            +GER D G P    P P G+   + PP  P +    GP         ++ D G
Sbjct: 1209 KGERGDPGSPGISPPGPRGK---KGPPGPPGSSGPPGPAGATGRAPKDIPDPG 1258


>gi|42476272 zinc finger protein 513 [Homo sapiens]
          Length = 541

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 4/50 (8%)

Query: 5   ERRDAGGPRPESPVPAGRASLEEPPDG----PSAGQATGPGEGRRSTESE 50
           E+  A   RPE  +     SL  PP G    P  GQ  G GEG   T SE
Sbjct: 256 EQEGAVPRRPEDALLLPDLSLHVPPGGASFLPDCGQLRGEGEGLCGTGSE 305


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.142    0.486 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,617,790
Number of Sequences: 37866
Number of extensions: 1155291
Number of successful extensions: 5345
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 5276
Number of HSP's gapped (non-prelim): 94
length of query: 487
length of database: 18,247,518
effective HSP length: 106
effective length of query: 381
effective length of database: 14,233,722
effective search space: 5423048082
effective search space used: 5423048082
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.