Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: OR2L13 Sequence: fasta or formatted (312aa) NCBI GI: 28557751
Description:

olfactory receptor, family 2, subfamily L, member 13

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         17           1
 C cysteine            2.9          9           1
 D aspartate           2.6          8           1
 E glutamate           2.2          7           1
 F phenylalanine       8.0         25           3
 G glycine             5.1         16           2
 H histidine           3.5         11           1
 I isoleucine          7.7         24           2
 K lysine              3.5         11           2
 L leucine            13.8         43           3
 M methionine          5.4         17           2
 N asparagine          2.9          9           1
 P proline             4.5         14           2
 Q glutamine           1.3          4           1
 R arginine            4.2         13           2
 S serine              8.3         26           2
 T threonine           6.4         20           2
 V valine              5.8         18           2
 W tryptophan          1.0          3           1
 Y tyrosine            5.4         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 2, subfamily L, member 13... 
OR2L3                 0.700   olfactory receptor, family 2, subfamily L, member 3 ...
OR2L2                 0.698   olfactory receptor, family 2, subfamily L, member 2 ...
OR2L8                 0.695   olfactory receptor, family 2, subfamily L, member 8 ...
OR2AK2                0.508   olfactory receptor, family 2, subfamily AK, member 2...
OR2T1                 0.492   olfactory receptor, family 2, subfamily T, member 1 ...
OR2M5                 0.479   olfactory receptor, family 2, subfamily M, member 5 ...
OR2M3                 0.479   olfactory receptor, family 2, subfamily M, member 3 ...
OR2V2                 0.475   olfactory receptor, family 2, subfamily V, member 2 ...
OR2T11                0.467   olfactory receptor, family 2, subfamily T, member 11...
OR2M2                 0.467   olfactory receptor, family 2, subfamily M, member 2 ...
OR2T33                0.464   olfactory receptor, family 2, subfamily T, member 33...
OR2M7                 0.461   olfactory receptor, family 2, subfamily M, member 7 ...
OR2T4                 0.456   olfactory receptor, family 2, subfamily T, member 4 ...
OR2T29                0.454   olfactory receptor, family 2, subfamily T, member 29...
OR2T8                 0.454   olfactory receptor, family 2, subfamily T, member 8 ...
OR2T5                 0.452   olfactory receptor, family 2, subfamily T, member 5 ...
OR2T27                0.452   olfactory receptor, family 2, subfamily T, member 27...
OR2M4                 0.451   olfactory receptor, family 2, subfamily M, member 4 ...
OR2T2                 0.449   olfactory receptor, family 2, subfamily T, member 2 ...
OR2T12                0.443   olfactory receptor, family 2, subfamily T, member 12...
OR2T35                0.443   olfactory receptor, family 2, subfamily T, member 35...
OR2T6                 0.434   olfactory receptor, family 2, subfamily T, member 6 ...
OR2T10                0.421   olfactory receptor, family 2, subfamily T, member 10...
OR2AG1                0.418   olfactory receptor, family 2, subfamily AG, member 1...
OR2Z1                 0.418   olfactory receptor, family 2, subfamily Z, member 1 ...
OR2AG2                0.411   olfactory receptor, family 2, subfamily AG, member 2...
OR2AE1                0.411   olfactory receptor, family 2, subfamily AE, member 1...
OR2T3                 0.405   olfactory receptor, family 2, subfamily T, member 3 ...
OR2T34                0.400   olfactory receptor, family 2, subfamily T, member 34...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press