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Search of human proteins with 13446229
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13446229 mesoderm development candidate 1 [Homo sapiens]
(362 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13446229 mesoderm development candidate 1 [Homo sapiens] 702 0.0
gi|223029410 talin 1 [Homo sapiens] 101 9e-22
gi|156938343 talin 2 [Homo sapiens] 100 2e-21
gi|60498978 elastin microfibril interfacer 2 [Homo sapiens] 40 0.004
gi|194353995 apolipoprotein L domain containing 1 isoform 1 [Hom... 34 0.23
gi|194353993 apolipoprotein L domain containing 1 isoform 2 [Hom... 34 0.23
gi|239756284 PREDICTED: similar to GOLGA8B protein, partial [Hom... 31 2.0
gi|21359963 ring finger and WD repeat domain 2 isoform a [Homo s... 31 2.0
gi|50233824 ring finger and WD repeat domain 2 isoform d24 [Homo... 31 2.0
gi|148539844 deleted in malignant brain tumors 1 isoform c precu... 30 2.6
gi|148539842 deleted in malignant brain tumors 1 isoform b precu... 30 2.6
gi|148539840 deleted in malignant brain tumors 1 isoform a precu... 30 2.6
gi|15431316 keratin, hair, basic, 4 [Homo sapiens] 30 3.4
gi|50363226 secretoglobin, family 3A, member 1 [Homo sapiens] 30 3.4
gi|112382237 desmuslin isoform A [Homo sapiens] 30 4.4
gi|122939153 nicotinamide nucleotide transhydrogenase [Homo sapi... 29 5.7
gi|122939155 nicotinamide nucleotide transhydrogenase [Homo sapi... 29 5.7
gi|109288010 solute carrier family 16, member 3 [Homo sapiens] 29 5.7
gi|109288012 solute carrier family 16, member 3 [Homo sapiens] 29 5.7
gi|4759112 solute carrier family 16, member 3 [Homo sapiens] 29 5.7
gi|239755390 PREDICTED: similar to DMBT1 isoform 1 [Homo sapiens] 29 7.5
gi|239755388 PREDICTED: similar to DMBT1 isoform 2 [Homo sapiens] 29 7.5
gi|115511036 alpha-kinase 3 [Homo sapiens] 29 7.5
gi|109148539 gamma-glutamyltransferase 7 [Homo sapiens] 29 7.5
gi|195947367 golgi autoantigen, golgin subfamily a, 8B [Homo sap... 28 9.8
gi|31083099 golgi autoantigen, golgin subfamily a, 8A [Homo sapi... 28 9.8
gi|102469037 jun D proto-oncogene [Homo sapiens] 28 9.8
>gi|13446229 mesoderm development candidate 1 [Homo sapiens]
Length = 362
Score = 702 bits (1813), Expect = 0.0
Identities = 362/362 (100%), Positives = 362/362 (100%)
Query: 1 MASGSAGKPTGEAASPAPASAIGGASSQPRKRLVSVCDHCKGKMQLVADLLLLSSEARPV 60
MASGSAGKPTGEAASPAPASAIGGASSQPRKRLVSVCDHCKGKMQLVADLLLLSSEARPV
Sbjct: 1 MASGSAGKPTGEAASPAPASAIGGASSQPRKRLVSVCDHCKGKMQLVADLLLLSSEARPV 60
Query: 61 LFEGPASSGAGAESFEQCRDTIIARTKGLSILTHDVQSQLNMGRFGEAGDSLVELGDLVV 120
LFEGPASSGAGAESFEQCRDTIIARTKGLSILTHDVQSQLNMGRFGEAGDSLVELGDLVV
Sbjct: 61 LFEGPASSGAGAESFEQCRDTIIARTKGLSILTHDVQSQLNMGRFGEAGDSLVELGDLVV 120
Query: 121 SLTECSAHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHEVEQGCAVLRATPLADMTPQLL 180
SLTECSAHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHEVEQGCAVLRATPLADMTPQLL
Sbjct: 121 SLTECSAHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHEVEQGCAVLRATPLADMTPQLL 180
Query: 181 LEVSQGLSRNLKFLTDACALASDKSRDRFSREQFKLGVKCMSTSASALLACVREVKVAPS 240
LEVSQGLSRNLKFLTDACALASDKSRDRFSREQFKLGVKCMSTSASALLACVREVKVAPS
Sbjct: 181 LEVSQGLSRNLKFLTDACALASDKSRDRFSREQFKLGVKCMSTSASALLACVREVKVAPS 240
Query: 241 ELARSRCALFSGPLVQAVSALVGFATEPQFLGRAAAVSAEGKAVQTAILGGAMSVVSACV 300
ELARSRCALFSGPLVQAVSALVGFATEPQFLGRAAAVSAEGKAVQTAILGGAMSVVSACV
Sbjct: 241 ELARSRCALFSGPLVQAVSALVGFATEPQFLGRAAAVSAEGKAVQTAILGGAMSVVSACV 300
Query: 301 LLTQCLRDLAQHPDGGAKMSDHRERLRNSACAVSEGCTLLSQALRERSSPRTLPPVNSNS 360
LLTQCLRDLAQHPDGGAKMSDHRERLRNSACAVSEGCTLLSQALRERSSPRTLPPVNSNS
Sbjct: 301 LLTQCLRDLAQHPDGGAKMSDHRERLRNSACAVSEGCTLLSQALRERSSPRTLPPVNSNS 360
Query: 361 VN 362
VN
Sbjct: 361 VN 362
>gi|223029410 talin 1 [Homo sapiens]
Length = 2541
Score = 101 bits (252), Expect = 9e-22
Identities = 75/294 (25%), Positives = 134/294 (45%), Gaps = 5/294 (1%)
Query: 20 SAIGGASSQPRKRLVSVCDHCKGKMQLVADLLLLSSEARPVLFEGPASSGAGAESFEQCR 79
+A A + +L+++C + Q D L E L E P S+ C
Sbjct: 1336 AAAARAVTDSINQLITMCTQ-QAPGQKECDNALRELETVRELLENPVQP-INDMSYFGCL 1393
Query: 80 DTIIARTKGLSILTHDVQSQLNMGRFGEAGDSLVELGDLVVSLTECSAHAAYLAAVATPG 139
D+++ +K L + G E GD++ + TE +A AAYL V+ P
Sbjct: 1394 DSVMENSKVLGEAMTGISQNAKNGNLPEFGDAISTASKALCGFTEAAAQAAYLVGVSDPN 1453
Query: 140 AQPAQPGLVDRYRVTRCRHEVEQGCAVLRATPLADMTPQLLLEVSQGLSRNLKFLTDACA 199
+Q Q GLV+ + R ++ C L T +L + ++++ L ++C
Sbjct: 1454 SQAGQQGLVEPTQFARANQAIQMACQSLGEP---GCTQAQVLSAATIVAKHTSALCNSCR 1510
Query: 200 LASDKSRDRFSREQFKLGVKCMSTSASALLACVREVKVAPSELARSRCALFSGPLVQAVS 259
LAS ++ + ++ QF K ++ S + L+ ++ + A +E R++C + PL++AV
Sbjct: 1511 LASARTTNPTAKRQFVQSAKEVANSTANLVKTIKALDGAFTEENRAQCRAATAPLLEAVD 1570
Query: 260 ALVGFATEPQFLGRAAAVSAEGKAVQTAILGGAMSVVSACVLLTQCLRDLAQHP 313
L FA+ P+F A +S EG+A I+ A +++ + L Q R LA +P
Sbjct: 1571 NLSAFASNPEFSSIPAQISPEGRAAMEPIVISAKTMLESAGGLIQTARALAVNP 1624
>gi|156938343 talin 2 [Homo sapiens]
Length = 2542
Score = 100 bits (250), Expect = 2e-21
Identities = 75/307 (24%), Positives = 140/307 (45%), Gaps = 9/307 (2%)
Query: 7 GKPTGEAASPAPASAIGGASSQPRKRLVSVCDHCKGKMQLVADLLLLSSEARPVLFEGPA 66
G P + A A A+ + +Q L+++C + Q D L E + + P
Sbjct: 1329 GAPNAKNLLAAAARAVTESINQ----LITLCTQ-QAPGQKECDNALRELETVKGMLDNPN 1383
Query: 67 SSGAGAESFEQCRDTIIARTKGLSILTHDVQSQLNMGRFGEAGDSLVELGDLVVSLTECS 126
+ F+ C ++++ +K L + G G+ + + LTE +
Sbjct: 1384 EPVSDLSYFD-CIESVMENSKVLGESMAGISQNAKTGDLPAFGECVGIASKALCGLTEAA 1442
Query: 127 AHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHEVEQGCAVLRATPLADMTPQLLLEVSQG 186
A AAYL ++ P +Q GLVD + R ++ C L P +P +L +
Sbjct: 1443 AQAAYLVGISDPNSQAGHQGLVDPIQFARANQAIQMACQNL-VDP--GSSPSQVLSAATI 1499
Query: 187 LSRNLKFLTDACALASDKSRDRFSREQFKLGVKCMSTSASALLACVREVKVAPSELARSR 246
++++ L +AC +AS K+ + ++ F K ++ S + L+ ++ + SE R++
Sbjct: 1500 VAKHTSALCNACRIASSKTANPVAKRHFVQSAKEVANSTANLVKTIKALDGDFSEDNRNK 1559
Query: 247 CALFSGPLVQAVSALVGFATEPQFLGRAAAVSAEGKAVQTAILGGAMSVVSACVLLTQCL 306
C + + PL++AV L FA+ P+F+ A +S+EG Q IL A +++ + L +
Sbjct: 1560 CRIATAPLIEAVENLTAFASNPEFVSIPAQISSEGSQAQEPILVSAKTMLESSSYLIRTA 1619
Query: 307 RDLAQHP 313
R LA +P
Sbjct: 1620 RSLAINP 1626
Score = 35.4 bits (80), Expect = 0.080
Identities = 33/155 (21%), Positives = 65/155 (41%), Gaps = 13/155 (8%)
Query: 46 LVADLLLLSSEARPVLFEGPASSGAGAESFEQCRDTIIARTKGLSILTHDVQSQLNMGRF 105
LV ++ +EA L EG G +F + T++ +K +++ ++ ++
Sbjct: 1824 LVGGMVDAIAEAMSKLDEGTPPEPKG--TFVDYQTTVVKYSKAIAVTAQEMMTK------ 1875
Query: 106 GEAGDSLVELGDLVVSLTECSAHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHE---VEQ 162
+ + ELG L +T H A+ +A A+P + G R RV H + Q
Sbjct: 1876 --SVTNPEELGGLASQMTSDYGHLAFQGQMAAATAEPEEIGFQIRTRVQDLGHGCIFLVQ 1933
Query: 163 GCAVLRATPLADMTPQLLLEVSQGLSRNLKFLTDA 197
L+ P T + L+E ++ ++ + + A
Sbjct: 1934 KAGALQVCPTDSYTKRELIECARAVTEKVSLVLSA 1968
>gi|60498978 elastin microfibril interfacer 2 [Homo sapiens]
Length = 1053
Score = 39.7 bits (91), Expect = 0.004
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 10 TGEAASPAPASAIGGASSQPRKRLVSVCDHCKGKMQLVADLLLLSSEARPVLFEG 64
TG SP A+A+ G S +R++ +H K K+Q+V D+ LL+ + +P EG
Sbjct: 512 TGAELSPPGAAALPGVSGSGDERVMMELNHLKDKVQVVEDICLLNIQGKPHGMEG 566
>gi|194353995 apolipoprotein L domain containing 1 isoform 1 [Homo
sapiens]
Length = 279
Score = 33.9 bits (76), Expect = 0.23
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 257 AVSALVGFATEPQFLGRAAAVSAEGKAVQTAILGGAMSVVSACVLLTQCLRDLAQHPDGG 316
A++A+VG + P LG + VSA G V TA GGA+++ S L+ R+L + +
Sbjct: 98 ALAAIVGLSLSPVTLGTSLLVSAVGLGVATA--GGAVTITSDLSLIFCNSRELRRVQEIA 155
Query: 317 AKMSDHRERL 326
A D +
Sbjct: 156 ATCQDQMREI 165
>gi|194353993 apolipoprotein L domain containing 1 isoform 2 [Homo
sapiens]
Length = 248
Score = 33.9 bits (76), Expect = 0.23
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 257 AVSALVGFATEPQFLGRAAAVSAEGKAVQTAILGGAMSVVSACVLLTQCLRDLAQHPDGG 316
A++A+VG + P LG + VSA G V TA GGA+++ S L+ R+L + +
Sbjct: 67 ALAAIVGLSLSPVTLGTSLLVSAVGLGVATA--GGAVTITSDLSLIFCNSRELRRVQEIA 124
Query: 317 AKMSDHRERL 326
A D +
Sbjct: 125 ATCQDQMREI 134
>gi|239756284 PREDICTED: similar to GOLGA8B protein, partial [Homo
sapiens]
Length = 314
Score = 30.8 bits (68), Expect = 2.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 99 QLNMGRFGEAGDSLVELGDLVVSLTECS-AHAAYLAAVATPGAQPAQPG 146
Q GR GE G+++ GD V + S H +LAA P A+P+ PG
Sbjct: 187 QAGPGRGGEEGEAVGAAGDGVAACGSYSEGHGKFLAAARNPAAEPS-PG 234
>gi|21359963 ring finger and WD repeat domain 2 isoform a [Homo
sapiens]
Length = 731
Score = 30.8 bits (68), Expect = 2.0
Identities = 30/86 (34%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Query: 3 SGSAGKPTGEAASPAPASAIGGASSQPRKRLVSVCDHC--KGKMQLVADLLLLSSEARPV 60
SGSAG G +A+ + SA SS P V+V G + A L RPV
Sbjct: 9 SGSAGTSPGSSAASSVTSASSSLSSSPSPPSVAVSAAALVSGGVAQAAGSGGLGGPVRPV 68
Query: 61 LFEGPAS-SGAGAESFEQCRDTIIAR 85
L S SG GA S R + AR
Sbjct: 69 LVAPAVSGSGGGAVSTGLSRHSCAAR 94
>gi|50233824 ring finger and WD repeat domain 2 isoform d24 [Homo
sapiens]
Length = 707
Score = 30.8 bits (68), Expect = 2.0
Identities = 30/86 (34%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Query: 3 SGSAGKPTGEAASPAPASAIGGASSQPRKRLVSVCDHC--KGKMQLVADLLLLSSEARPV 60
SGSAG G +A+ + SA SS P V+V G + A L RPV
Sbjct: 9 SGSAGTSPGSSAASSVTSASSSLSSSPSPPSVAVSAAALVSGGVAQAAGSGGLGGPVRPV 68
Query: 61 LFEGPAS-SGAGAESFEQCRDTIIAR 85
L S SG GA S R + AR
Sbjct: 69 LVAPAVSGSGGGAVSTGLSRHSCAAR 94
>gi|148539844 deleted in malignant brain tumors 1 isoform c precursor
[Homo sapiens]
Length = 2403
Score = 30.4 bits (67), Expect = 2.6
Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 28/134 (20%)
Query: 1 MASGSAGKPTGEAAS-PAPASAIGGASSQPRKRLVSVCDHCKGKMQLVADLLLLSSEARP 59
+ S S +PT + P ++ G+ S RLV+ D C+G+++
Sbjct: 1210 ICSASQSQPTPSPDTWPTSHASTAGSESSLALRLVNGGDRCQGRVE-------------- 1255
Query: 60 VLFEGPASSGAGAESFEQCRD-TIIARTKGLSILTHDVQSQLNMGRFGEAGDSLVELGDL 118
VL+ G S G + + D ++ R G T S RFG+ G +
Sbjct: 1256 VLYRG--SWGTVCDDYWDTNDANVVCRQLGCGWAT----SAPGNARFGQGS------GPI 1303
Query: 119 VVSLTECSAHAAYL 132
V+ CS H +YL
Sbjct: 1304 VLDDVRCSGHESYL 1317
Score = 30.4 bits (67), Expect = 2.6
Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 28/134 (20%)
Query: 1 MASGSAGKPTGEAAS-PAPASAIGGASSQPRKRLVSVCDHCKGKMQLVADLLLLSSEARP 59
+ S S +PT + P ++ G+ S RLV+ D C+G+++
Sbjct: 1339 ICSASQSQPTPSPDTWPTSHASTAGSESSLALRLVNGGDRCQGRVE-------------- 1384
Query: 60 VLFEGPASSGAGAESFEQCRD-TIIARTKGLSILTHDVQSQLNMGRFGEAGDSLVELGDL 118
VL+ G S G + + D ++ R G T S RFG+ G +
Sbjct: 1385 VLYRG--SWGTVCDDYWDTNDANVVCRQLGCGWAT----SAPGNARFGQGS------GPI 1432
Query: 119 VVSLTECSAHAAYL 132
V+ CS H +YL
Sbjct: 1433 VLDDVRCSGHESYL 1446
Score = 29.3 bits (64), Expect = 5.7
Identities = 43/179 (24%), Positives = 66/179 (36%), Gaps = 41/179 (22%)
Query: 3 SGSAGKPTGEAASPAPASAIGGASSQPRKRLVSVCDHCKGKMQLVADLLLLSSEARPVLF 62
S S +P + P S +G SS RLV+ D C+G+++ VL+
Sbjct: 696 SRSTPRPDTLSTITLPPSTVGSESSLTL-RLVNGSDRCQGRVE--------------VLY 740
Query: 63 EGPASSGAGAESFEQCRDTIIARTKGLSILTHDVQSQLNMGRFGEAGDSLVELGDLVVSL 122
G + +S++ ++ R G T S RFG+ G +V+
Sbjct: 741 RGSWGTVCD-DSWDTNDANVVCRQLGCGWAT----SAPGNARFGQGS------GPIVLDD 789
Query: 123 TECSAHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHEVEQG--CAV--LRATPLADMTP 177
CS H +YL + G + C H + G C+V R TP D P
Sbjct: 790 VRCSGHESYLWSCPHNG-----------WLSHNCGHHEDAGVICSVSQSRPTPSPDTWP 837
Score = 29.3 bits (64), Expect = 5.7
Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 28/134 (20%)
Query: 1 MASGSAGKPTGEAAS-PAPASAIGGASSQPRKRLVSVCDHCKGKMQLVADLLLLSSEARP 59
+ S S +PT + P ++ G+ S RLV+ D C+G+++
Sbjct: 1081 ICSASQSRPTPSPDTWPTSHASTAGSESSLALRLVNGGDRCQGRVE-------------- 1126
Query: 60 VLFEGPASSGAGAESFEQCRD-TIIARTKGLSILTHDVQSQLNMGRFGEAGDSLVELGDL 118
VL+ G S G + + D ++ R G S RFG+ G +
Sbjct: 1127 VLYRG--SWGTVCDDYWDTNDANVVCRQLGCGW----AMSAPGNARFGQGS------GPI 1174
Query: 119 VVSLTECSAHAAYL 132
V+ CS H +YL
Sbjct: 1175 VLDDVRCSGHESYL 1188
Score = 28.5 bits (62), Expect = 9.8
Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 28/134 (20%)
Query: 1 MASGSAGKPTGEAAS-PAPASAIGGASSQPRKRLVSVCDHCKGKMQLVADLLLLSSEARP 59
+ S S +PT + P ++ G+ S RLV+ D C+G+++
Sbjct: 1468 ICSASQSQPTPSPDTWPTSRASTAGSESTLALRLVNGGDRCRGRVE-------------- 1513
Query: 60 VLFEGPASSGAGAESFEQCRD-TIIARTKGLSILTHDVQSQLNMGRFGEAGDSLVELGDL 118
VL++G S G + + D ++ R G S +FG+ G +
Sbjct: 1514 VLYQG--SWGTVCDDYWDTNDANVVCRQLGCGW----AMSAPGNAQFGQGS------GPI 1561
Query: 119 VVSLTECSAHAAYL 132
V+ CS H +YL
Sbjct: 1562 VLDDVRCSGHESYL 1575
>gi|148539842 deleted in malignant brain tumors 1 isoform b precursor
[Homo sapiens]
Length = 2413
Score = 30.4 bits (67), Expect = 2.6
Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 28/134 (20%)
Query: 1 MASGSAGKPTGEAAS-PAPASAIGGASSQPRKRLVSVCDHCKGKMQLVADLLLLSSEARP 59
+ S S +PT + P ++ G+ S RLV+ D C+G+++
Sbjct: 1220 ICSASQSQPTPSPDTWPTSHASTAGSESSLALRLVNGGDRCQGRVE-------------- 1265
Query: 60 VLFEGPASSGAGAESFEQCRD-TIIARTKGLSILTHDVQSQLNMGRFGEAGDSLVELGDL 118
VL+ G S G + + D ++ R G T S RFG+ G +
Sbjct: 1266 VLYRG--SWGTVCDDYWDTNDANVVCRQLGCGWAT----SAPGNARFGQGS------GPI 1313
Query: 119 VVSLTECSAHAAYL 132
V+ CS H +YL
Sbjct: 1314 VLDDVRCSGHESYL 1327
Score = 30.4 bits (67), Expect = 2.6
Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 28/134 (20%)
Query: 1 MASGSAGKPTGEAAS-PAPASAIGGASSQPRKRLVSVCDHCKGKMQLVADLLLLSSEARP 59
+ S S +PT + P ++ G+ S RLV+ D C+G+++
Sbjct: 1349 ICSASQSQPTPSPDTWPTSHASTAGSESSLALRLVNGGDRCQGRVE-------------- 1394
Query: 60 VLFEGPASSGAGAESFEQCRD-TIIARTKGLSILTHDVQSQLNMGRFGEAGDSLVELGDL 118
VL+ G S G + + D ++ R G T S RFG+ G +
Sbjct: 1395 VLYRG--SWGTVCDDYWDTNDANVVCRQLGCGWAT----SAPGNARFGQGS------GPI 1442
Query: 119 VVSLTECSAHAAYL 132
V+ CS H +YL
Sbjct: 1443 VLDDVRCSGHESYL 1456
Score = 29.3 bits (64), Expect = 5.7
Identities = 43/179 (24%), Positives = 66/179 (36%), Gaps = 41/179 (22%)
Query: 3 SGSAGKPTGEAASPAPASAIGGASSQPRKRLVSVCDHCKGKMQLVADLLLLSSEARPVLF 62
S S +P + P S +G SS RLV+ D C+G+++ VL+
Sbjct: 706 SRSTPRPDTLSTITLPPSTVGSESSLTL-RLVNGSDRCQGRVE--------------VLY 750
Query: 63 EGPASSGAGAESFEQCRDTIIARTKGLSILTHDVQSQLNMGRFGEAGDSLVELGDLVVSL 122
G + +S++ ++ R G T S RFG+ G +V+
Sbjct: 751 RGSWGTVCD-DSWDTNDANVVCRQLGCGWAT----SAPGNARFGQGS------GPIVLDD 799
Query: 123 TECSAHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHEVEQG--CAV--LRATPLADMTP 177
CS H +YL + G + C H + G C+V R TP D P
Sbjct: 800 VRCSGHESYLWSCPHNG-----------WLSHNCGHHEDAGVICSVSQSRPTPSPDTWP 847
Score = 29.3 bits (64), Expect = 5.7
Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 28/134 (20%)
Query: 1 MASGSAGKPTGEAAS-PAPASAIGGASSQPRKRLVSVCDHCKGKMQLVADLLLLSSEARP 59
+ S S +PT + P ++ G+ S RLV+ D C+G+++
Sbjct: 1091 ICSASQSRPTPSPDTWPTSHASTAGSESSLALRLVNGGDRCQGRVE-------------- 1136
Query: 60 VLFEGPASSGAGAESFEQCRD-TIIARTKGLSILTHDVQSQLNMGRFGEAGDSLVELGDL 118
VL+ G S G + + D ++ R G S RFG+ G +
Sbjct: 1137 VLYRG--SWGTVCDDYWDTNDANVVCRQLGCGW----AMSAPGNARFGQGS------GPI 1184
Query: 119 VVSLTECSAHAAYL 132
V+ CS H +YL
Sbjct: 1185 VLDDVRCSGHESYL 1198
Score = 28.5 bits (62), Expect = 9.8
Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 28/134 (20%)
Query: 1 MASGSAGKPTGEAAS-PAPASAIGGASSQPRKRLVSVCDHCKGKMQLVADLLLLSSEARP 59
+ S S +PT + P ++ G+ S RLV+ D C+G+++
Sbjct: 1478 ICSASQSQPTPSPDTWPTSRASTAGSESTLALRLVNGGDRCRGRVE-------------- 1523
Query: 60 VLFEGPASSGAGAESFEQCRD-TIIARTKGLSILTHDVQSQLNMGRFGEAGDSLVELGDL 118
VL++G S G + + D ++ R G S +FG+ G +
Sbjct: 1524 VLYQG--SWGTVCDDYWDTNDANVVCRQLGCGW----AMSAPGNAQFGQGS------GPI 1571
Query: 119 VVSLTECSAHAAYL 132
V+ CS H +YL
Sbjct: 1572 VLDDVRCSGHESYL 1585
>gi|148539840 deleted in malignant brain tumors 1 isoform a
precursor [Homo sapiens]
Length = 1785
Score = 30.4 bits (67), Expect = 2.6
Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 28/134 (20%)
Query: 1 MASGSAGKPTGEAAS-PAPASAIGGASSQPRKRLVSVCDHCKGKMQLVADLLLLSSEARP 59
+ S S +PT + P ++ G+ S RLV+ D C+G+++
Sbjct: 721 ICSASQSQPTPSPDTWPTSHASTAGSESSLALRLVNGGDRCQGRVE-------------- 766
Query: 60 VLFEGPASSGAGAESFEQCRD-TIIARTKGLSILTHDVQSQLNMGRFGEAGDSLVELGDL 118
VL+ G S G + + D ++ R G T S RFG+ G +
Sbjct: 767 VLYRG--SWGTVCDDYWDTNDANVVCRQLGCGWAT----SAPGNARFGQGS------GPI 814
Query: 119 VVSLTECSAHAAYL 132
V+ CS H +YL
Sbjct: 815 VLDDVRCSGHESYL 828
Score = 29.3 bits (64), Expect = 5.7
Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 28/134 (20%)
Query: 1 MASGSAGKPTGEAAS-PAPASAIGGASSQPRKRLVSVCDHCKGKMQLVADLLLLSSEARP 59
+ S S +PT + P ++ G+ S RLV+ D C+G+++
Sbjct: 592 ICSASQSRPTPSPDTWPTSHASTAGSESSLALRLVNGGDRCQGRVE-------------- 637
Query: 60 VLFEGPASSGAGAESFEQCRD-TIIARTKGLSILTHDVQSQLNMGRFGEAGDSLVELGDL 118
VL+ G S G + + D ++ R G S RFG+ G +
Sbjct: 638 VLYRG--SWGTVCDDYWDTNDANVVCRQLGCGW----AMSAPGNARFGQGS------GPI 685
Query: 119 VVSLTECSAHAAYL 132
V+ CS H +YL
Sbjct: 686 VLDDVRCSGHESYL 699
Score = 28.5 bits (62), Expect = 9.8
Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 28/134 (20%)
Query: 1 MASGSAGKPTGEAAS-PAPASAIGGASSQPRKRLVSVCDHCKGKMQLVADLLLLSSEARP 59
+ S S +PT + P ++ G+ S RLV+ D C+G+++
Sbjct: 850 ICSASQSQPTPSPDTWPTSRASTAGSESTLALRLVNGGDRCRGRVE-------------- 895
Query: 60 VLFEGPASSGAGAESFEQCRD-TIIARTKGLSILTHDVQSQLNMGRFGEAGDSLVELGDL 118
VL++G S G + + D ++ R G S +FG+ G +
Sbjct: 896 VLYQG--SWGTVCDDYWDTNDANVVCRQLGCGW----AMSAPGNAQFGQGS------GPI 943
Query: 119 VVSLTECSAHAAYL 132
V+ CS H +YL
Sbjct: 944 VLDDVRCSGHESYL 957
>gi|15431316 keratin, hair, basic, 4 [Homo sapiens]
Length = 600
Score = 30.0 bits (66), Expect = 3.4
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Query: 223 TSASALLACVREVKVAPSELARSRCALFSGPLVQAVSALVGFATEPQFLGRAAAVSAEGK 282
+S+ L C E VA S L+R V A S ++ A+ LG A A G
Sbjct: 488 SSSRGGLVCGPEPLVAGSTLSRGGVTFSGSSSVCATSGVL--ASCGPSLGGARVAPATGD 545
Query: 283 AVQTAILGGAMSVVSACVLLTQC 305
+ T G+M + ACV C
Sbjct: 546 LLSTGTRSGSMLISEACVPSVPC 568
>gi|50363226 secretoglobin, family 3A, member 1 [Homo sapiens]
Length = 104
Score = 30.0 bits (66), Expect = 3.4
Identities = 28/79 (35%), Positives = 34/79 (43%), Gaps = 12/79 (15%)
Query: 112 LVELGDLVVSLTECSAHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHEVEQGCAVLRATP 171
L L L V+L+ CS+ AA+L A P AQP V E G L A P
Sbjct: 3 LAALLGLCVALS-CSSAAAFLVGSAKPVAQP----------VAALESAAEAGAGTL-ANP 50
Query: 172 LADMTPQLLLEVSQGLSRN 190
L + P LL S G+ N
Sbjct: 51 LGTLNPLKLLLSSLGIPVN 69
>gi|112382237 desmuslin isoform A [Homo sapiens]
Length = 1565
Score = 29.6 bits (65), Expect = 4.4
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 233 REVKVAPSELARSRCALFSGPLVQAVSALVGFATEPQFLGRAAAVSAEGKAVQTAILGGA 292
R +K+ PSE+ R+ + GP + V G L +AA+ + ++V+ LG
Sbjct: 1125 RHIKLGPSEVWRTERMSYEGPTAEVVEVSAG-----GDLSQAASPTGASRSVRHVTLGPG 1179
Query: 293 MSVVSACVL 301
S +S V+
Sbjct: 1180 QSPLSREVI 1188
>gi|122939153 nicotinamide nucleotide transhydrogenase [Homo
sapiens]
Length = 1086
Score = 29.3 bits (64), Expect = 5.7
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 235 VKVAPSELARSRCALFSGPLVQAVSALVGFATEPQF------LGRAAAVSAEGKAVQTAI 288
+K AP L R L +G L +V ++ F +P F LG +A+SA TA
Sbjct: 767 LKSAPL-LLPGRHLLNAGLLAASVGGIIPFMVDPSFTTGITCLGSVSALSAVMGVTLTAA 825
Query: 289 LGGAMSVVSACVL 301
+GGA V VL
Sbjct: 826 IGGADMPVVITVL 838
>gi|122939155 nicotinamide nucleotide transhydrogenase [Homo
sapiens]
Length = 1086
Score = 29.3 bits (64), Expect = 5.7
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 235 VKVAPSELARSRCALFSGPLVQAVSALVGFATEPQF------LGRAAAVSAEGKAVQTAI 288
+K AP L R L +G L +V ++ F +P F LG +A+SA TA
Sbjct: 767 LKSAPL-LLPGRHLLNAGLLAASVGGIIPFMVDPSFTTGITCLGSVSALSAVMGVTLTAA 825
Query: 289 LGGAMSVVSACVL 301
+GGA V VL
Sbjct: 826 IGGADMPVVITVL 838
>gi|109288010 solute carrier family 16, member 3 [Homo sapiens]
Length = 465
Score = 29.3 bits (64), Expect = 5.7
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 99 QLNMGRFGEAGDSLVELGDLVVSLTECSAHAAYLAAVATPGAQPAQP 145
QL R+G G L+ LG L+++ C+A L A PG+ P +P
Sbjct: 168 QLLQDRYGWRGGFLI-LGGLLLNCCVCAALMRPLVVTAQPGSGPPRP 213
>gi|109288012 solute carrier family 16, member 3 [Homo sapiens]
Length = 465
Score = 29.3 bits (64), Expect = 5.7
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 99 QLNMGRFGEAGDSLVELGDLVVSLTECSAHAAYLAAVATPGAQPAQP 145
QL R+G G L+ LG L+++ C+A L A PG+ P +P
Sbjct: 168 QLLQDRYGWRGGFLI-LGGLLLNCCVCAALMRPLVVTAQPGSGPPRP 213
>gi|4759112 solute carrier family 16, member 3 [Homo sapiens]
Length = 465
Score = 29.3 bits (64), Expect = 5.7
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 99 QLNMGRFGEAGDSLVELGDLVVSLTECSAHAAYLAAVATPGAQPAQP 145
QL R+G G L+ LG L+++ C+A L A PG+ P +P
Sbjct: 168 QLLQDRYGWRGGFLI-LGGLLLNCCVCAALMRPLVVTAQPGSGPPRP 213
>gi|239755390 PREDICTED: similar to DMBT1 isoform 1 [Homo sapiens]
Length = 1662
Score = 28.9 bits (63), Expect = 7.5
Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 28/134 (20%)
Query: 1 MASGSAGKPTGEAAS-PAPASAIGGASSQPRKRLVSVCDHCKGKMQLVADLLLLSSEARP 59
+ S S +PT + P ++ G+ S RLV+ D C+G+++
Sbjct: 727 ICSASQSRPTPSPDTWPTSRASTAGSESTLALRLVNGGDRCRGRVE-------------- 772
Query: 60 VLFEGPASSGAGAESFEQCRD-TIIARTKGLSILTHDVQSQLNMGRFGEAGDSLVELGDL 118
VL++G S G + + D ++ R G S +FG+ G +
Sbjct: 773 VLYQG--SWGTVCDDYWDTNDANVVCRQLGCGW----AMSAPGNAQFGQGS------GPI 820
Query: 119 VVSLTECSAHAAYL 132
V+ CS H +YL
Sbjct: 821 VLDDVRCSGHESYL 834
>gi|239755388 PREDICTED: similar to DMBT1 isoform 2 [Homo sapiens]
Length = 1788
Score = 28.9 bits (63), Expect = 7.5
Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 28/134 (20%)
Query: 1 MASGSAGKPTGEAAS-PAPASAIGGASSQPRKRLVSVCDHCKGKMQLVADLLLLSSEARP 59
+ S S +PT + P ++ G+ S RLV+ D C+G+++
Sbjct: 853 ICSASQSRPTPSPDTWPTSRASTAGSESTLALRLVNGGDRCRGRVE-------------- 898
Query: 60 VLFEGPASSGAGAESFEQCRD-TIIARTKGLSILTHDVQSQLNMGRFGEAGDSLVELGDL 118
VL++G S G + + D ++ R G S +FG+ G +
Sbjct: 899 VLYQG--SWGTVCDDYWDTNDANVVCRQLGCGW----AMSAPGNAQFGQGS------GPI 946
Query: 119 VVSLTECSAHAAYL 132
V+ CS H +YL
Sbjct: 947 VLDDVRCSGHESYL 960
>gi|115511036 alpha-kinase 3 [Homo sapiens]
Length = 1907
Score = 28.9 bits (63), Expect = 7.5
Identities = 43/159 (27%), Positives = 63/159 (39%), Gaps = 25/159 (15%)
Query: 137 TPGAQPAQPGLVDRYR-------------VTRCRHEVEQGCAVLRATPLADMTPQLLLEV 183
TPG + PGL+D + + E + G A P A +TP +EV
Sbjct: 1148 TPGPRSCDPGLIDSLKNYLLLLLKLSSTETSGAGGESQVGAATGGLVPSATLTP--TVEV 1205
Query: 184 SQGLSRNLKFLTDACALASDKSRDRFSREQFKLGVKCMSTSASALLACVREVKVAPSELA 243
+ GLS T L ++ Q L C S + LL REV+ LA
Sbjct: 1206 A-GLSPR----TSRRILERVENNHLVQSAQTLLLSPCTSRRLTGLLD--REVQAGRQALA 1258
Query: 244 RSRCALFSGPLVQAVSALVGFATEPQFLGRAAAVSAEGK 282
+R + GP V A+V +P G A+ ++EG+
Sbjct: 1259 AARGSWGPGPSSLTVPAIVVDEEDP---GLASEGASEGE 1294
>gi|109148539 gamma-glutamyltransferase 7 [Homo sapiens]
Length = 662
Score = 28.9 bits (63), Expect = 7.5
Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 15/99 (15%)
Query: 232 VREVKVAPSELARSRCALFSGPLVQAVSALVGFAT-------------EPQFLGRAAAVS 278
+RE + P A + C+ L V+A + FAT +PQ + A V+
Sbjct: 85 LRETRKDPFSAAAAECSCRQDGLTVIVTACLTFATGVTVALVMQIYFGDPQIFQQGAVVT 144
Query: 279 AEGKAVQTAI--LGGAMSVVSACVLLTQCLRDLAQHPDG 315
+ I L S V A V CL +A H G
Sbjct: 145 DAARCTSLGIEVLSKQGSSVDAAVAAALCLGIVAPHSSG 183
>gi|195947367 golgi autoantigen, golgin subfamily a, 8B [Homo
sapiens]
Length = 603
Score = 28.5 bits (62), Expect = 9.8
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 99 QLNMGRFGEAGDSLVELGDLVVSLTECS-AHAAYLAAVATPGAQPAQPG 146
Q G+ GE G++ GD V + S H +LAA P A+P+ PG
Sbjct: 475 QAGPGQGGEEGEAAGAAGDGVAACGSYSEGHGKFLAAARNPAAEPS-PG 522
>gi|31083099 golgi autoantigen, golgin subfamily a, 8A [Homo
sapiens]
Length = 603
Score = 28.5 bits (62), Expect = 9.8
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 99 QLNMGRFGEAGDSLVELGDLVVSLTECS-AHAAYLAAVATPGAQPAQPG 146
Q G+ GE G++ GD V + S H +LAA P A+P+ PG
Sbjct: 475 QAGPGQGGEEGEAAGAAGDGVAACGSYSEGHGKFLAAARNPAAEPS-PG 522
>gi|102469037 jun D proto-oncogene [Homo sapiens]
Length = 347
Score = 28.5 bits (62), Expect = 9.8
Identities = 18/69 (26%), Positives = 28/69 (40%)
Query: 2 ASGSAGKPTGEAASPAPASAIGGASSQPRKRLVSVCDHCKGKMQLVADLLLLSSEARPVL 61
A+ +AG P+G A AP + A++ P + + G ++ A PV
Sbjct: 162 AAAAAGGPSGTATGSAPPGELAPAAAAPEAPVYANLSSYAGGAGGAGGAATVAFAAEPVP 221
Query: 62 FEGPASSGA 70
F P GA
Sbjct: 222 FPPPPPPGA 230
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.129 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,398,120
Number of Sequences: 37866
Number of extensions: 553628
Number of successful extensions: 2103
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 2055
Number of HSP's gapped (non-prelim): 68
length of query: 362
length of database: 18,247,518
effective HSP length: 104
effective length of query: 258
effective length of database: 14,309,454
effective search space: 3691839132
effective search space used: 3691839132
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.