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Search of human proteins with 60592764
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|60592764 chromosome 22 open reading frame 42 [Homo sapiens]
(251 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|60592764 chromosome 22 open reading frame 42 [Homo sapiens] 511 e-145
gi|56118955 hypothetical protein LOC51233 [Homo sapiens] 51 1e-06
gi|221136914 ArfGAP with GTPase domain, ankyrin repeat and PH do... 35 0.062
gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1 precu... 32 0.40
gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2 pre... 32 0.40
gi|239754098 PREDICTED: similar to rCG33261 [Homo sapiens] 32 0.52
gi|239748651 PREDICTED: similar to rCG33261 [Homo sapiens] 32 0.52
gi|239742676 PREDICTED: similar to rCG33261 [Homo sapiens] 32 0.52
gi|57863310 stromal antigen 3 [Homo sapiens] 31 0.89
gi|210032580 SET domain containing 1B [Homo sapiens] 31 1.2
gi|38016156 hypothetical protein LOC55345 [Homo sapiens] 30 1.5
gi|31982906 cingulin-like 1 [Homo sapiens] 30 2.0
gi|214830655 cyclin Y-like 1 isoform 1 [Homo sapiens] 30 2.6
gi|5729986 processing of precursor 4 [Homo sapiens] 29 3.4
gi|7657575 sirtuin 1 isoform a [Homo sapiens] 29 3.4
gi|194363771 sperm specific antigen 2 isoform 1 [Homo sapiens] 29 3.4
gi|28557788 sperm specific antigen 2 isoform 2 [Homo sapiens] 29 3.4
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 29 3.4
gi|115648142 centrosomal protein 164kDa [Homo sapiens] 29 4.4
gi|16507200 ubiquitin specific protease 28 [Homo sapiens] 29 4.4
gi|110624790 erythrocyte membrane protein band 4.1 like 4B isofo... 29 4.4
gi|122937335 F-box protein 46 [Homo sapiens] 29 4.4
gi|83921609 hypothetical protein LOC127254 [Homo sapiens] 29 4.4
gi|55770834 centromere protein F [Homo sapiens] 28 5.8
gi|194353968 hypothetical protein LOC256815 [Homo sapiens] 28 5.8
gi|122937400 odz, odd Oz/ten-m homolog 3 [Homo sapiens] 28 5.8
gi|41406089 SRY-box 13 [Homo sapiens] 28 5.8
gi|33239440 zinc finger protein, Y-linked isoform 1 [Homo sapiens] 28 7.6
gi|223717965 zinc finger protein, Y-linked isoform 2 [Homo sapiens] 28 7.6
gi|46909600 a disintegrin and metalloproteinase domain 15 isofor... 28 7.6
>gi|60592764 chromosome 22 open reading frame 42 [Homo sapiens]
Length = 251
Score = 511 bits (1317), Expect = e-145
Identities = 251/251 (100%), Positives = 251/251 (100%)
Query: 1 MGSKLTCCLGPSGGLNCDCCRPDVGPCHECEIPETVAATAPASTTAKPAKLDLKAKKAQL 60
MGSKLTCCLGPSGGLNCDCCRPDVGPCHECEIPETVAATAPASTTAKPAKLDLKAKKAQL
Sbjct: 1 MGSKLTCCLGPSGGLNCDCCRPDVGPCHECEIPETVAATAPASTTAKPAKLDLKAKKAQL 60
Query: 61 MQYLSLPKTPKMLKMSKGLDARSKRWLKIIWRRHGIWPLENIGPTEDVQASAHGGVEENM 120
MQYLSLPKTPKMLKMSKGLDARSKRWLKIIWRRHGIWPLENIGPTEDVQASAHGGVEENM
Sbjct: 61 MQYLSLPKTPKMLKMSKGLDARSKRWLKIIWRRHGIWPLENIGPTEDVQASAHGGVEENM 120
Query: 121 TSDIEIPEAKHDHRPTEDVQVSAHGGVEENITSDIEISEAKHDHHLVEDLSESLSVCLED 180
TSDIEIPEAKHDHRPTEDVQVSAHGGVEENITSDIEISEAKHDHHLVEDLSESLSVCLED
Sbjct: 121 TSDIEIPEAKHDHRPTEDVQVSAHGGVEENITSDIEISEAKHDHHLVEDLSESLSVCLED 180
Query: 181 FMTSDLSESLSVSLEDFMTSGLSESLSVSLEDLMTPEMAKERYEDYLCWVKMARSRLNEP 240
FMTSDLSESLSVSLEDFMTSGLSESLSVSLEDLMTPEMAKERYEDYLCWVKMARSRLNEP
Sbjct: 181 FMTSDLSESLSVSLEDFMTSGLSESLSVSLEDLMTPEMAKERYEDYLCWVKMARSRLNEP 240
Query: 241 ISSQVLGLLRL 251
ISSQVLGLLRL
Sbjct: 241 ISSQVLGLLRL 251
>gi|56118955 hypothetical protein LOC51233 [Homo sapiens]
Length = 229
Score = 50.8 bits (120), Expect = 1e-06
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 1 MGSKLTCCLGPSGGLNCDCCRPDVGPCHECE--IPETVAATAPASTTAKPAKLDLKAKKA 58
MG+ LTCC+ +C R PC+E + I ETVAA STT +P KLD+ A +
Sbjct: 1 MGNILTCCINS----HCGWPRGKDAPCYESDTDIYETVAAATSESTTVEPGKLDVGATEG 56
Query: 59 QLMQYLSLPKTP 70
Q +Q++S K P
Sbjct: 57 QDLQHISNQKMP 68
>gi|221136914 ArfGAP with GTPase domain, ankyrin repeat and PH
domain 5 [Homo sapiens]
Length = 686
Score = 35.0 bits (79), Expect = 0.062
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 1 MGSKLTCCLGPSGGLNCDCCRPDVGPCHECEIPETVA----ATAPASTTAKPAKLDLKAK 56
MG+ LTCC+ PS L D + V P E EI E A A AP + +PA++ ++
Sbjct: 1 MGNILTCCVHPSVSLEFDQQQGSVCP-SESEIYEAGAGDRMAGAPMAAAVQPAEVTVEVG 59
Query: 57 KAQLMQYLSLPKTPKMLKMS 76
+ M ++ + P+ L+ S
Sbjct: 60 EDLHMHHIRDQEMPEALEFS 79
>gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1
precursor [Homo sapiens]
Length = 513
Score = 32.3 bits (72), Expect = 0.40
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 13/121 (10%)
Query: 104 PTEDVQASAHGGVEENMTSDIEIPEAKHDHRPTEDVQVSAHGGVEENITSDIE--ISEAK 161
P D + + +EN++ + E+++ P+ + A+ +EN + E +SE++
Sbjct: 309 PRRDSKGDSQEDSKENLSQE----ESQNVDGPSSESSQEANLSSQENSSESQEEVVSESR 364
Query: 162 HDH-----HLVEDLSESLSVCLEDFMTSDLSESLSVSLEDFMTSGLSESLSVSLEDLMTP 216
D+ VED +S S E+ + LS S S S E+ S SESL+ S E +P
Sbjct: 365 GDNPDPTTSYVEDQEDSDSS--EEDSSHTLSHSKSESREEQADSESSESLNFSEESPESP 422
Query: 217 E 217
E
Sbjct: 423 E 423
>gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2
precursor [Homo sapiens]
Length = 497
Score = 32.3 bits (72), Expect = 0.40
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 13/121 (10%)
Query: 104 PTEDVQASAHGGVEENMTSDIEIPEAKHDHRPTEDVQVSAHGGVEENITSDIE--ISEAK 161
P D + + +EN++ + E+++ P+ + A+ +EN + E +SE++
Sbjct: 293 PRRDSKGDSQEDSKENLSQE----ESQNVDGPSSESSQEANLSSQENSSESQEEVVSESR 348
Query: 162 HDH-----HLVEDLSESLSVCLEDFMTSDLSESLSVSLEDFMTSGLSESLSVSLEDLMTP 216
D+ VED +S S E+ + LS S S S E+ S SESL+ S E +P
Sbjct: 349 GDNPDPTTSYVEDQEDSDSS--EEDSSHTLSHSKSESREEQADSESSESLNFSEESPESP 406
Query: 217 E 217
E
Sbjct: 407 E 407
>gi|239754098 PREDICTED: similar to rCG33261 [Homo sapiens]
Length = 213
Score = 32.0 bits (71), Expect = 0.52
Identities = 47/183 (25%), Positives = 74/183 (40%), Gaps = 29/183 (15%)
Query: 51 LDLKAKKAQLMQYLSLPKTPKMLKMSKG-LDARSKRWLKIIWRRHGIWPLENIGPTEDVQ 109
L + +K + Q L+L TP + +K SKR K+ HG+ + E +
Sbjct: 4 LRVYTRKKREGQRLNLTPTPDLGSPAKAEAPPGSKRKGKV----HGLSKI-----AEKAE 54
Query: 110 ASAHGGVEENMTSD---IEIPEAKHDHRPTEDVQVSAHGGVEENITSDIEISEAKHDHHL 166
S GG S + ++ ++R +ED Q + E++T D+++ + + L
Sbjct: 55 RSRQGGSGSGPFSPRLGVTGEKSLQENRSSEDTQDEKIASLRESVTDDLQVDSSSSNSEL 114
Query: 167 VEDLSESLSVCLEDFMTSDLSESLSVSLEDFMTSGLSESLSVSLEDLMTPEMAKERYEDY 226
V LS L M S L LS S+ D S E +PE+ R DY
Sbjct: 115 VSGLS------LHHGMASSL---LSYSVTDSYAEYKSFE-----ESFPSPELF--RKSDY 158
Query: 227 LCW 229
L W
Sbjct: 159 LDW 161
>gi|239748651 PREDICTED: similar to rCG33261 [Homo sapiens]
Length = 213
Score = 32.0 bits (71), Expect = 0.52
Identities = 47/183 (25%), Positives = 74/183 (40%), Gaps = 29/183 (15%)
Query: 51 LDLKAKKAQLMQYLSLPKTPKMLKMSKG-LDARSKRWLKIIWRRHGIWPLENIGPTEDVQ 109
L + +K + Q L+L TP + +K SKR K+ HG+ + E +
Sbjct: 4 LRVYTRKKREGQRLNLTPTPDLGSPAKAEAPPGSKRKGKV----HGLSKI-----AEKAE 54
Query: 110 ASAHGGVEENMTSD---IEIPEAKHDHRPTEDVQVSAHGGVEENITSDIEISEAKHDHHL 166
S GG S + ++ ++R +ED Q + E++T D+++ + + L
Sbjct: 55 RSRQGGSGSGPFSPRLGVTGEKSLQENRSSEDTQDEKIASLRESVTDDLQVDSSSSNSEL 114
Query: 167 VEDLSESLSVCLEDFMTSDLSESLSVSLEDFMTSGLSESLSVSLEDLMTPEMAKERYEDY 226
V LS L M S L LS S+ D S E +PE+ R DY
Sbjct: 115 VSGLS------LHHGMASSL---LSYSVTDSYAEYKSFE-----ESFPSPELF--RKSDY 158
Query: 227 LCW 229
L W
Sbjct: 159 LDW 161
>gi|239742676 PREDICTED: similar to rCG33261 [Homo sapiens]
Length = 213
Score = 32.0 bits (71), Expect = 0.52
Identities = 47/183 (25%), Positives = 74/183 (40%), Gaps = 29/183 (15%)
Query: 51 LDLKAKKAQLMQYLSLPKTPKMLKMSKG-LDARSKRWLKIIWRRHGIWPLENIGPTEDVQ 109
L + +K + Q L+L TP + +K SKR K+ HG+ + E +
Sbjct: 4 LRVYTRKKREGQRLNLTPTPDLGSPAKAEAPPGSKRKGKV----HGLSKI-----AEKAE 54
Query: 110 ASAHGGVEENMTSD---IEIPEAKHDHRPTEDVQVSAHGGVEENITSDIEISEAKHDHHL 166
S GG S + ++ ++R +ED Q + E++T D+++ + + L
Sbjct: 55 RSRQGGSGSGPFSPRLGVTGEKSLQENRSSEDTQDEKIASLRESVTDDLQVDSSSSNSEL 114
Query: 167 VEDLSESLSVCLEDFMTSDLSESLSVSLEDFMTSGLSESLSVSLEDLMTPEMAKERYEDY 226
V LS L M S L LS S+ D S E +PE+ R DY
Sbjct: 115 VSGLS------LHHGMASSL---LSYSVTDSYAEYKSFE-----ESFPSPELF--RKSDY 158
Query: 227 LCW 229
L W
Sbjct: 159 LDW 161
>gi|57863310 stromal antigen 3 [Homo sapiens]
Length = 1225
Score = 31.2 bits (69), Expect = 0.89
Identities = 40/183 (21%), Positives = 69/183 (37%), Gaps = 22/183 (12%)
Query: 27 CHECEIPETVAATAP----------ASTTAKPAKLDLKAKKAQLMQYLSLPKTPKMLKMS 76
CH E A T+P AKP + D+ + + + +Q S+P TP + S
Sbjct: 1053 CHSLSPVENTAETSPQVLPSSKRRRVEGPAKPNREDVSSSQEESLQLNSIPPTPTL--TS 1110
Query: 77 KGLDARSKRW-LKIIWRRHGIWPLENIGPTEDVQASAHGGVEENMTSDIEIPEAKHD-HR 134
+ +R W LK + G + Q G E + + + H+
Sbjct: 1111 TAVKSRQPLWGLKEMEEEDG-------SELDFAQGQPVAGTERSRFLGPQYFQTPHNPSG 1163
Query: 135 PTEDVQVSAHGGVEENITSDIEISEAKHDHHLVEDLSESLSVCLEDFMTSDLSESLSVSL 194
P Q+ +EE+ ++EI + ++ D+ S S DL +S + +
Sbjct: 1164 PGLGNQLMRLSLMEEDEEEELEIQDESNEERQDTDMQAS-SYSSTSERGLDLLDSTELDI 1222
Query: 195 EDF 197
EDF
Sbjct: 1223 EDF 1225
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 30.8 bits (68), Expect = 1.2
Identities = 37/135 (27%), Positives = 56/135 (41%), Gaps = 5/135 (3%)
Query: 92 RRHGIWPLE-NIGPTEDVQASAHGGVEENMTSDIEIPEAKHDHRPTEDVQVSAHGGVEEN 150
RR PLE + G ED + S EE +++ E + + +D S EN
Sbjct: 1020 RRRPARPLELDSGGEEDEKESLS---EEQESTEEEEEAEEEEEEEDDDDDDSDDRDESEN 1076
Query: 151 ITSDIEISEAKHDHHLVEDLSESLSVCLEDFMTSDLSESLSVSLEDFMTSGLSESLSVSL 210
D +SEA D E++S+ + SES S S E +S S S S
Sbjct: 1077 DDEDTALSEASEKDEGDSDEEETVSIVTSKAEATSSSES-SESSEFESSSESSPSSSEDE 1135
Query: 211 EDLMTPEMAKERYED 225
E+++ E +E E+
Sbjct: 1136 EEVVAREEEEEEEEE 1150
>gi|38016156 hypothetical protein LOC55345 [Homo sapiens]
Length = 1062
Score = 30.4 bits (67), Expect = 1.5
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 13/88 (14%)
Query: 117 EENMTSDIEIPEAKHDHRPTEDVQVSAHGGVEENITSDIEISEAKHDHHLVEDLSESLSV 176
+E S+ +PE KH ++ S + + ++IT ISE+K D+ + + ESLS
Sbjct: 470 KEYEQSESSLPELKH-----LQIESSNNSRISDDITD--MISESKMDNESLNSIHESLSN 522
Query: 177 CLEDFMTSDLSESLSVSLEDFMTSGLSE 204
+ F+ ++ +L +F TS E
Sbjct: 523 VTQPFL------EVTFNLNNFETSDTEE 544
>gi|31982906 cingulin-like 1 [Homo sapiens]
Length = 1302
Score = 30.0 bits (66), Expect = 2.0
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 13/116 (11%)
Query: 118 ENMTSDIEIPEAKHDHRPTEDVQVS-----AHGGVEENITSDIEISEAKHDHHL-VEDLS 171
E M +++E ++H+ + E+ + + G + +N+ ++ + H + DL
Sbjct: 645 ERMRANLEELRSQHNEKVEENSTLQQRLEESEGELRKNLEELFQVKMEREQHQTEIRDLQ 704
Query: 172 ESLSVCLEDFMTSDLSESLSVSLEDFMTSGLSESLSVSLEDLMTPEMAKERYEDYL 227
+ LS ++ ++ SE D L E L + +DL +AKE ED L
Sbjct: 705 DQLSEMHDELDSAKRSE-------DREKGALIEELLQAKQDLQDLLIAKEEQEDLL 753
>gi|214830655 cyclin Y-like 1 isoform 1 [Homo sapiens]
Length = 308
Score = 29.6 bits (65), Expect = 2.6
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query: 1 MGSKLTCCLGPSGGLNCDCCRPDVGPCHECEIPETVA--ATAPASTTAKPAKLDLKAKKA 58
MG+ LTCC+ P+ +I E V+ A A A +PA+LD +
Sbjct: 1 MGNTLTCCVSPNASPKLGRRAGSAELYCASDIYEAVSGDAVAVAPAVVEPAELDFGEGEG 60
Query: 59 QLMQYLSLPKTPKMLKM 75
+Q++S + P+ L +
Sbjct: 61 HHLQHISDREMPEDLAL 77
>gi|5729986 processing of precursor 4 [Homo sapiens]
Length = 220
Score = 29.3 bits (64), Expect = 3.4
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 49 AKLDLKAKKAQLMQYLSLPKTPKMLKMSKGLDARSKRWLKI 89
A+ D +KA +++Y + K + K +KGL AR +R L++
Sbjct: 46 AREDQLQRKAVVLEYFTRHKRKEKKKKAKGLSARQRRELRL 86
>gi|7657575 sirtuin 1 isoform a [Homo sapiens]
Length = 747
Score = 29.3 bits (64), Expect = 3.4
Identities = 28/121 (23%), Positives = 48/121 (39%), Gaps = 5/121 (4%)
Query: 98 PLENIGPTEDVQASAHGGVEENMTSDIEIPEAKHDHRPTEDVQVSAHGGVEENITSDIEI 157
P IGP VQ G + +PE P ++ + NI S+
Sbjct: 178 PRPRIGPYTFVQQHLMIGTDPRTILKDLLPETI----PPPELDDMTLWQIVINILSEPPK 233
Query: 158 SEAKHDHHLVEDLSESLSVCLEDFMTSDLSESLSVSLEDFMT-SGLSESLSVSLEDLMTP 216
+ + D + +ED + L C + + + S+S + DF + G+ L+V DL P
Sbjct: 234 RKKRKDINTIEDAVKLLQECKKIIVLTGAGVSVSCGIPDFRSRDGIYARLAVDFPDLPDP 293
Query: 217 E 217
+
Sbjct: 294 Q 294
>gi|194363771 sperm specific antigen 2 isoform 1 [Homo sapiens]
Length = 1259
Score = 29.3 bits (64), Expect = 3.4
Identities = 42/200 (21%), Positives = 81/200 (40%), Gaps = 24/200 (12%)
Query: 37 AATAPASTTAKPAKLDLKAKKAQLMQYLSLPKTPKMLKMSKGLDARSKRWLKIIWRRHGI 96
A + + TT DL AQ Y + + ++ + KGL+ + K R+ G
Sbjct: 537 ADSCDSETTVTSLGEDLATPTAQDQPYFNESEEESLVPLQKGLEKAAAVADK---RKSGS 593
Query: 97 WPLENIGPTEDVQASAHGGVEENMTSD----IEIPEAKHDHRPTEDVQVSAHGGVEENIT 152
E+ G +++ S IEI E + D P E V++ E ++
Sbjct: 594 QDFPQCNTIENT------GTKQSTCSPGDHIIEITEVEEDLFPAETVELLREASAESDVG 647
Query: 153 SDIEISEAKH-DHHLVEDLSESLSVCLEDFMTSDLSESLSVSLEDFMTSGLSESLSV-SL 210
E ++ HH+++ L+ + C + M+S+ + S++ T+ + V SL
Sbjct: 648 KSSESEFTQYTTHHILKSLASIEAKCSD--MSSENTTGPPSSMDRVNTALQRAQMKVCSL 705
Query: 211 ED-------LMTPEMAKERY 223
+ L + ++ K+RY
Sbjct: 706 SNQRMGRSLLKSKDLLKQRY 725
>gi|28557788 sperm specific antigen 2 isoform 2 [Homo sapiens]
Length = 1256
Score = 29.3 bits (64), Expect = 3.4
Identities = 42/200 (21%), Positives = 81/200 (40%), Gaps = 24/200 (12%)
Query: 37 AATAPASTTAKPAKLDLKAKKAQLMQYLSLPKTPKMLKMSKGLDARSKRWLKIIWRRHGI 96
A + + TT DL AQ Y + + ++ + KGL+ + K R+ G
Sbjct: 537 ADSCDSETTVTSLGEDLATPTAQDQPYFNESEEESLVPLQKGLEKAAAVADK---RKSGS 593
Query: 97 WPLENIGPTEDVQASAHGGVEENMTSD----IEIPEAKHDHRPTEDVQVSAHGGVEENIT 152
E+ G +++ S IEI E + D P E V++ E ++
Sbjct: 594 QDFPQCNTIENT------GTKQSTCSPGDHIIEITEVEEDLFPAETVELLREASAESDVG 647
Query: 153 SDIEISEAKH-DHHLVEDLSESLSVCLEDFMTSDLSESLSVSLEDFMTSGLSESLSV-SL 210
E ++ HH+++ L+ + C + M+S+ + S++ T+ + V SL
Sbjct: 648 KSSESEFTQYTTHHILKSLASIEAKCSD--MSSENTTGPPSSMDRVNTALQRAQMKVCSL 705
Query: 211 ED-------LMTPEMAKERY 223
+ L + ++ K+RY
Sbjct: 706 SNQRMGRSLLKSKDLLKQRY 725
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 29.3 bits (64), Expect = 3.4
Identities = 35/144 (24%), Positives = 56/144 (38%), Gaps = 27/144 (18%)
Query: 105 TEDVQASAHGGVEENMTSDIEIPEAKHDHRP-----------------TEDVQVSAHGGV 147
+EDV+A G + + D+E PEA+ + +P TE V+ G
Sbjct: 1871 SEDVEAPEAEGEAQPESEDVETPEAEWEVQPESEGAEAPEAEKEAQPETESVEALETEGE 1930
Query: 148 EENITSDIEISEAKHDHHLVEDLSESLSVCLEDFMT-------SDLSESLSVSLEDFMTS 200
+E + E EA+ E ++ S +E S+ E+L V +E
Sbjct: 1931 DEPESEGAEAQEAEEAAQEAEGQTQPESEVIESQEAEEEAQPESEDVEALEVEVETQEAE 1990
Query: 201 GLSESLSVSLEDLMTPEMAKERYE 224
G ++ S ED+ PE E E
Sbjct: 1991 GEAQPES---EDVEAPEAEGEMQE 2011
>gi|115648142 centrosomal protein 164kDa [Homo sapiens]
Length = 1460
Score = 28.9 bits (63), Expect = 4.4
Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Query: 120 MTSDIEIPEAKHDHRPTEDVQVSAHGGVEENITSDIEISEAKHDHHLVEDLS-ESLSVCL 178
+ S +++ +A+ + A ++++ ++ + E H DL E L L
Sbjct: 1011 LESQVDLLQAQSQQLQKHFSSLEAEAQKKQHLLREVTVEENNASPHFEPDLHIEDLRKSL 1070
Query: 179 EDFMTSDLSESLSVSLEDFMTSGLS 203
T ++S SLS S ED LS
Sbjct: 1071 GTNQTKEVSSSLSQSKEDLYLDSLS 1095
>gi|16507200 ubiquitin specific protease 28 [Homo sapiens]
Length = 1077
Score = 28.9 bits (63), Expect = 4.4
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 128 EAKHDHRPTEDVQVS-------AHGGVEENITSD-IEISEAKHDH---HLVEDLSESLSV 176
E DH TE + V H + +I+ D ++ E +H +L +D++E+L +
Sbjct: 965 ETNDDHSVTEGINVMNELIIPCIHLIINNDISKDDLDAIEVMRNHWCSYLGQDIAENLQL 1024
Query: 177 CLEDFMTSDLSESLSV 192
CL +F+ L S +
Sbjct: 1025 CLGEFLPRLLDPSAEI 1040
>gi|110624790 erythrocyte membrane protein band 4.1 like 4B isoform
2 [Homo sapiens]
Length = 900
Score = 28.9 bits (63), Expect = 4.4
Identities = 26/76 (34%), Positives = 32/76 (42%), Gaps = 12/76 (15%)
Query: 3 SKLTCCLGPSGGL-NCDCCRPDVGPCHECEIPETVAATAPASTTAKPAKLDLKAKKAQLM 61
SKL CC GP+ L RP + ETV+ TT KP + L A L
Sbjct: 835 SKLQCCPGPTSPLIPAATLRP---------LTETVSTVQTIYTTRKP--VSLAASAETLR 883
Query: 62 QYLSLPKTPKMLKMSK 77
Q L K K L M++
Sbjct: 884 QELEREKMMKRLLMTE 899
>gi|122937335 F-box protein 46 [Homo sapiens]
Length = 603
Score = 28.9 bits (63), Expect = 4.4
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 5/43 (11%)
Query: 4 KLTCCLGPSGGLNCDCCRPDVGPCHECEIPETVAATAPASTTA 46
K + C P GG PD GP H P +A PAS A
Sbjct: 33 KPSACPEPGGG-----AEPDHGPAHSENTPPALATEVPASQPA 70
>gi|83921609 hypothetical protein LOC127254 [Homo sapiens]
Length = 1530
Score = 28.9 bits (63), Expect = 4.4
Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 6/113 (5%)
Query: 99 LENIGPTEDVQASAHGGVEENMTSDIEIPEAKHDHRPTEDVQVSAHGGVEENITSDIEIS 158
LE+ GP ED + G EE + E + + + TE ++S G E S +++S
Sbjct: 953 LEDTGPMEDTASKREDGSEEAILGGEEPAKERKEVMRTE-TRLSPFTGEAE--ASRMQVS 1009
Query: 159 EAKHDHHLVEDLSESLSVCLEDFMTSDLSESLSVSLEDFMTSGLSESLSVSLE 211
E + L++ +C ED ++ + ED L + L ++ E
Sbjct: 1010 EGSPEE---GSLAKEAFLCKEDVEGEEMVTEAEANREDDRKEILPKELDLARE 1059
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 28.5 bits (62), Expect = 5.8
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 152 TSDIEISEAKHDHHLVED-------LSESLSVCLEDFMTSDLSESLSVSLEDFMTSGLSE 204
T EI E K +HL+ED LSE+LS+ ++ M+S +S + E +G +
Sbjct: 922 TEQAEIQELKKSNHLLEDSLKELQLLSETLSLEKKE-MSSIISLNKREIEELTQENGTLK 980
Query: 205 SLSVSL-EDLMTPEMAKERYEDYLCWVKMARSRLNEPISSQVLGLLR 250
++ SL ++ M E + +Y+ + + S L++ + L LL+
Sbjct: 981 EINASLNQEKMNLIQKSESFANYIDEREKSISELSDQYKQEKLILLQ 1027
>gi|194353968 hypothetical protein LOC256815 [Homo sapiens]
Length = 185
Score = 28.5 bits (62), Expect = 5.8
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Query: 145 GGVEENITSDIEISEAKHDHHLVEDLSESLSVCLEDFMTSDLSESLSVSLEDFMTSGLSE 204
G NI+ D++I DH D SE LSV T L++ + DF L +
Sbjct: 67 GSTRLNISDDLKIGFFSTDHATQTDSSEILSVKELSSSTQKLAQMMKSLQVDF--GFLKQ 124
Query: 205 SLSVSLEDLMTPE 217
L + ED + E
Sbjct: 125 LLQLKFEDRLKEE 137
>gi|122937400 odz, odd Oz/ten-m homolog 3 [Homo sapiens]
Length = 2699
Score = 28.5 bits (62), Expect = 5.8
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 139 VQVSAHGGVEENITSDIEISEAKHDHHLVEDLS--ESLSVCLEDFMTSDLSESLSVSLED 196
V + HG +++ IT DIE S + D + +LS +S ++D + + SL
Sbjct: 1647 VVTNLHGDMDKAITVDIESSSREEDVSITSNLSSIDSFYTMVQDQLRNSYQIGYDGSLRI 1706
Query: 197 FMTSGL 202
SGL
Sbjct: 1707 IYASGL 1712
>gi|41406089 SRY-box 13 [Homo sapiens]
Length = 622
Score = 28.5 bits (62), Expect = 5.8
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
Query: 26 PCHECEIPETVAATAPASTTAKPAKLDLKAKKAQLMQYLSLPKTPKMLKMSKGLDARSKR 85
PC E P + + PA +P + + Q L+L PK ++ + S +
Sbjct: 255 PCKPVEYPLQLLHSPPAPVVKRPGAMATHHPLQEPSQPLNLTAKPKAPELPNTSSSPSLK 314
Query: 86 WLKIIWRRHGIWPLENIGPTEDVQAS 111
+ R P + GPT D+Q+S
Sbjct: 315 MSSCVPR-----PPSHGGPTRDLQSS 335
>gi|33239440 zinc finger protein, Y-linked isoform 1 [Homo sapiens]
Length = 801
Score = 28.1 bits (61), Expect = 7.6
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 99 LENIGPTEDVQASAHGGVEENMTSDIEIPEAKHDHRPTEDVQVSAHGGVEENITSDIEIS 158
+E++ EDVQ S E +++ ++ IPE D TE+V + ++ + SDI +
Sbjct: 69 VEDVVIEEDVQCSDILE-EADVSENVIIPEQVLDSDVTEEVSLPHCTVPDDVLASDITST 127
Query: 159 EAKHDHHLVEDLSESLSVC 177
H++ SES+ VC
Sbjct: 128 SMSMPEHVL--TSESMHVC 144
>gi|223717965 zinc finger protein, Y-linked isoform 2 [Homo sapiens]
Length = 724
Score = 28.1 bits (61), Expect = 7.6
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 99 LENIGPTEDVQASAHGGVEENMTSDIEIPEAKHDHRPTEDVQVSAHGGVEENITSDIEIS 158
+E++ EDVQ S E +++ ++ IPE D TE+V + ++ + SDI +
Sbjct: 43 VEDVVIEEDVQCSDILE-EADVSENVIIPEQVLDSDVTEEVSLPHCTVPDDVLASDITST 101
Query: 159 EAKHDHHLVEDLSESLSVC 177
H++ SES+ VC
Sbjct: 102 SMSMPEHVL--TSESMHVC 118
>gi|46909600 a disintegrin and metalloproteinase domain 15 isoform 6
preproprotein [Homo sapiens]
Length = 863
Score = 28.1 bits (61), Expect = 7.6
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 11/73 (15%)
Query: 97 WPLENIGPTEDVQASAHGGVEENMTSDIEIPEAKHDHRPTEDVQVSAHGGVEENITSDIE 156
WPL NIG TE+ QA + E + P+ D D+ +S ++ ++ +
Sbjct: 21 WPLPNIGGTEEQQAESEKAPREPLE-----PQVLQD-----DLPISLKKVLQTSLPEPLR 70
Query: 157 IS-EAKHDHHLVE 168
I E D H++E
Sbjct: 71 IKLELDGDSHILE 83
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,880,032
Number of Sequences: 37866
Number of extensions: 424742
Number of successful extensions: 1130
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 1104
Number of HSP's gapped (non-prelim): 58
length of query: 251
length of database: 18,247,518
effective HSP length: 100
effective length of query: 151
effective length of database: 14,460,918
effective search space: 2183598618
effective search space used: 2183598618
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.