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Search of human proteins with 6031189
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|6031189 neuro-oncological ventral antigen 1 isoform 3 [Homo
sapiens]
(181 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|6031189 neuro-oncological ventral antigen 1 isoform 3 [Homo s... 363 e-101
gi|56549653 neuro-oncological ventral antigen 1 isoform 1 [Homo ... 346 7e-96
gi|56549651 neuro-oncological ventral antigen 1 isoform 2 [Homo ... 300 3e-82
gi|5902724 neuro-oncological ventral antigen 2 [Homo sapiens] 221 3e-58
gi|14165439 heterogeneous nuclear ribonucleoprotein K isoform a ... 49 2e-06
gi|14165435 heterogeneous nuclear ribonucleoprotein K isoform b ... 49 2e-06
gi|14165437 heterogeneous nuclear ribonucleoprotein K isoform a ... 49 2e-06
gi|30795212 insulin-like growth factor 2 mRNA binding protein 3 ... 49 3e-06
gi|194306633 poly(rC) binding protein 3 isoform 2 [Homo sapiens] 49 3e-06
gi|194306631 poly(rC) binding protein 3 isoform 1 [Homo sapiens] 49 3e-06
gi|56118219 insulin-like growth factor 2 mRNA binding protein 2 ... 48 5e-06
gi|64085377 insulin-like growth factor 2 mRNA binding protein 2 ... 48 5e-06
gi|222352151 poly(rC) binding protein 1 [Homo sapiens] 47 9e-06
gi|238624257 insulin-like growth factor 2 mRNA binding protein 1... 45 3e-05
gi|56237027 insulin-like growth factor 2 mRNA binding protein 1 ... 45 3e-05
gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo sap... 45 3e-05
gi|38683816 ankyrin repeat domain protein 17 isoform b [Homo sap... 45 3e-05
gi|14670373 poly(rC) binding protein 4 isoform c [Homo sapiens] 44 8e-05
gi|14670369 poly(rC) binding protein 4 isoform c [Homo sapiens] 44 8e-05
gi|193083114 poly(rC) binding protein 2 isoform g [Homo sapiens] 44 1e-04
gi|193083112 poly(rC) binding protein 2 isoform f [Homo sapiens] 44 1e-04
gi|193083110 poly(rC) binding protein 2 isoform e [Homo sapiens] 44 1e-04
gi|193083108 poly(rC) binding protein 2 isoform d [Homo sapiens] 44 1e-04
gi|14141166 poly(rC) binding protein 2 isoform b [Homo sapiens] 44 1e-04
gi|14141168 poly(rC) binding protein 2 isoform a [Homo sapiens] 44 1e-04
gi|148833484 poly(rC) binding protein 2 isoform c [Homo sapiens] 44 1e-04
gi|145312259 tudor and KH domain containing isoform a [Homo sapi... 44 1e-04
gi|145312270 tudor and KH domain containing isoform a [Homo sapi... 44 1e-04
gi|145312256 tudor and KH domain containing isoform a [Homo sapi... 44 1e-04
gi|17402900 far upstream element-binding protein [Homo sapiens] 42 2e-04
>gi|6031189 neuro-oncological ventral antigen 1 isoform 3 [Homo
sapiens]
Length = 181
Score = 363 bits (933), Expect = e-101
Identities = 181/181 (100%), Positives = 181/181 (100%)
Query: 1 MMAAAPIQQNGTHTGVPIDLDPPDSRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYA 60
MMAAAPIQQNGTHTGVPIDLDPPDSRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYA
Sbjct: 1 MMAAAPIQQNGTHTGVPIDLDPPDSRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYA 60
Query: 61 AGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKI 120
AGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKI
Sbjct: 61 AGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKI 120
Query: 121 REMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQKHNISWI 180
REMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQKHNISWI
Sbjct: 121 REMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQKHNISWI 180
Query: 181 S 181
S
Sbjct: 181 S 181
>gi|56549653 neuro-oncological ventral antigen 1 isoform 1 [Homo
sapiens]
Length = 507
Score = 346 bits (887), Expect = 7e-96
Identities = 173/173 (100%), Positives = 173/173 (100%)
Query: 1 MMAAAPIQQNGTHTGVPIDLDPPDSRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYA 60
MMAAAPIQQNGTHTGVPIDLDPPDSRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYA
Sbjct: 1 MMAAAPIQQNGTHTGVPIDLDPPDSRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYA 60
Query: 61 AGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKI 120
AGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKI
Sbjct: 61 AGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKI 120
Query: 121 REMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQ 173
REMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQ
Sbjct: 121 REMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQ 173
Score = 65.1 bits (157), Expect = 3e-11
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 29 PLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 88
PL A G+ K T+ +D +++ +P G+I+GKGG+T+V+ Q+ TGA I++SK
Sbjct: 404 PLAASAILGTEKSTDGSKD---VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKK 460
Query: 89 KDFYPGTTERVCLIQGTVEALNAVHGFIAEKI 120
+F PGT R I GT A A I ++I
Sbjct: 461 GEFVPGTRNRKVTITGTPAATQAAQYLITQRI 492
Score = 53.1 bits (126), Expect = 1e-07
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 23 PDSRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGAT 82
P S +P + +T R N +K+++P+ AG IIGKGG T+ + +++GA
Sbjct: 152 PSSPTTTKSSPSDPMTTSRANQ-------VKIIVPNSTAGLIIGKGGATVKAVMEQSGAW 204
Query: 83 IKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQN 126
++LS+ D ERV + G E I +KI+E PQ+
Sbjct: 205 VQLSQKPDGI-NLQERVVTVSGEPEQNRKAVELIIQKIQEDPQS 247
>gi|56549651 neuro-oncological ventral antigen 1 isoform 2 [Homo
sapiens]
Length = 483
Score = 300 bits (769), Expect = 3e-82
Identities = 151/158 (95%), Positives = 152/158 (96%)
Query: 1 MMAAAPIQQNGTHTGVPIDLDPPDSRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYA 60
MMAAAPIQQNGTHTGVPIDLDPPDSRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYA
Sbjct: 1 MMAAAPIQQNGTHTGVPIDLDPPDSRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYA 60
Query: 61 AGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKI 120
AGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKI
Sbjct: 61 AGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKI 120
Query: 121 REMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTT 158
REMPQNVAKTEPVSILQPQTTVNPDRIKQ P +T
Sbjct: 121 REMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNST 158
Score = 65.1 bits (157), Expect = 3e-11
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 29 PLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 88
PL A G+ K T+ +D +++ +P G+I+GKGG+T+V+ Q+ TGA I++SK
Sbjct: 380 PLAASAILGTEKSTDGSKD---VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKK 436
Query: 89 KDFYPGTTERVCLIQGTVEALNAVHGFIAEKI 120
+F PGT R I GT A A I ++I
Sbjct: 437 GEFVPGTRNRKVTITGTPAATQAAQYLITQRI 468
Score = 50.8 bits (120), Expect = 6e-07
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 41 RTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 100
+T D +K+++P+ AG IIGKGG T+ + +++GA ++LS+ D ERV
Sbjct: 139 QTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGI-NLQERVV 197
Query: 101 LIQGTVEALNAVHGFIAEKIREMPQN 126
+ G E I +KI+E PQ+
Sbjct: 198 TVSGEPEQNRKAVELIIQKIQEDPQS 223
>gi|5902724 neuro-oncological ventral antigen 2 [Homo sapiens]
Length = 492
Score = 221 bits (563), Expect = 3e-58
Identities = 109/138 (78%), Positives = 120/138 (86%)
Query: 21 DPPDSRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETG 80
+ PDSRKRPLE PPE TKR+NTGE+G+YFLKVLIPSYAAGSIIGKGGQTIVQLQKETG
Sbjct: 4 EAPDSRKRPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETG 63
Query: 81 ATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQT 140
ATIKLSKSKDFYPGTTERVCL+QGT EALNAVH FIAEK+RE+PQ + K E V+ILQPQT
Sbjct: 64 ATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQT 123
Query: 141 TVNPDRIKQTLPSSPTTT 158
T+NPDR KQ P +T
Sbjct: 124 TMNPDRAKQAKLIVPNST 141
Score = 59.7 bits (143), Expect = 1e-09
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 46 EDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGT 105
E + +++ +P G+I+GKGG+T+V+ Q+ TGA I++SK +F PGT R I G+
Sbjct: 403 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 462
Query: 106 VEALNAVHGFIAEKIREMPQNVAKTEPVSI 135
A A I++++ Q V + P +
Sbjct: 463 PAATQAAQYLISQRV-TYEQGVRASNPQKV 491
Score = 50.1 bits (118), Expect = 1e-06
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 41 RTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 100
+T D K+++P+ AG IIGKGG T+ + +++GA ++LS+ + ERV
Sbjct: 122 QTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGI-NLQERVV 180
Query: 101 LIQGTVEALNAVHGFIAEKIREMPQN 126
+ G E ++ I +K++E PQ+
Sbjct: 181 TVSGEPEQVHKAVSAIVQKVQEDPQS 206
>gi|14165439 heterogeneous nuclear ribonucleoprotein K isoform a
[Homo sapiens]
Length = 464
Score = 48.9 bits (115), Expect = 2e-06
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAV 112
+V IP AGSIIGKGGQ I Q++ E+GA+IK+ + + G+ +R+ I GT + +
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLE---GSEDRIITITGTQDQIQNA 447
Query: 113 HGFIAEKIRE 122
+ +++
Sbjct: 448 QYLLQNSVKQ 457
Score = 41.6 bits (96), Expect = 4e-04
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 22 PPDSRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGA 81
P + + PLE+ + G D L++LI AG IIG G I +L++ T
Sbjct: 117 PTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQT 176
Query: 82 TIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMP 124
TIKL ++ P +T+RV LI G + + I + I E P
Sbjct: 177 TIKL--FQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESP 217
Score = 40.8 bits (94), Expect = 6e-04
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 27 KRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 86
KRP E E + KR+ D L++L+ S AG++IGKGG+ I L+ + A++ +
Sbjct: 21 KRPAEDMEEEQAFKRSRN-TDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVP 79
Query: 87 KSKDFYPGTTERVCLIQGTVEALNAV 112
S ER+ I +E + +
Sbjct: 80 DSSG-----PERILSISADIETIGEI 100
>gi|14165435 heterogeneous nuclear ribonucleoprotein K isoform b
[Homo sapiens]
Length = 463
Score = 48.9 bits (115), Expect = 2e-06
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAV 112
+V IP AGSIIGKGGQ I Q++ E+GA+IK+ + + G+ +R+ I GT + +
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLE---GSEDRIITITGTQDQIQNA 447
Query: 113 HGFIAEKIRE 122
+ +++
Sbjct: 448 QYLLQNSVKQ 457
Score = 41.6 bits (96), Expect = 4e-04
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 22 PPDSRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGA 81
P + + PLE+ + G D L++LI AG IIG G I +L++ T
Sbjct: 117 PTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQT 176
Query: 82 TIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMP 124
TIKL ++ P +T+RV LI G + + I + I E P
Sbjct: 177 TIKL--FQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESP 217
Score = 40.8 bits (94), Expect = 6e-04
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 27 KRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 86
KRP E E + KR+ D L++L+ S AG++IGKGG+ I L+ + A++ +
Sbjct: 21 KRPAEDMEEEQAFKRSRN-TDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVP 79
Query: 87 KSKDFYPGTTERVCLIQGTVEALNAV 112
S ER+ I +E + +
Sbjct: 80 DSSG-----PERILSISADIETIGEI 100
>gi|14165437 heterogeneous nuclear ribonucleoprotein K isoform a
[Homo sapiens]
Length = 464
Score = 48.9 bits (115), Expect = 2e-06
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAV 112
+V IP AGSIIGKGGQ I Q++ E+GA+IK+ + + G+ +R+ I GT + +
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLE---GSEDRIITITGTQDQIQNA 447
Query: 113 HGFIAEKIRE 122
+ +++
Sbjct: 448 QYLLQNSVKQ 457
Score = 41.6 bits (96), Expect = 4e-04
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 22 PPDSRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGA 81
P + + PLE+ + G D L++LI AG IIG G I +L++ T
Sbjct: 117 PTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQT 176
Query: 82 TIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMP 124
TIKL ++ P +T+RV LI G + + I + I E P
Sbjct: 177 TIKL--FQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESP 217
Score = 40.8 bits (94), Expect = 6e-04
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 27 KRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 86
KRP E E + KR+ D L++L+ S AG++IGKGG+ I L+ + A++ +
Sbjct: 21 KRPAEDMEEEQAFKRSRN-TDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVP 79
Query: 87 KSKDFYPGTTERVCLIQGTVEALNAV 112
S ER+ I +E + +
Sbjct: 80 DSSG-----PERILSISADIETIGEI 100
>gi|30795212 insulin-like growth factor 2 mRNA binding protein 3
[Homo sapiens]
Length = 579
Score = 48.5 bits (114), Expect = 3e-06
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 18 IDLDPPDS-RKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQ 76
+ L PP S P PP A + + + + IP+ + G+IIGK GQ I QL
Sbjct: 373 LGLFPPTSGMPPPTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLS 432
Query: 77 KETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIRE 122
+ GA+IK++ ++ P R+ +I G EA G I KI+E
Sbjct: 433 RFAGASIKIAPAE--APDAKVRMVIITGPPEAQFKAQGRIYGKIKE 476
Score = 42.7 bits (99), Expect = 2e-04
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Query: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
LK+L + G +IGK G+ + +++++T I +S ++ ER ++G VE
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGNVETCAK 338
Query: 112 VHGFIAEKIREMPQN-VAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPS 163
I +KIRE +N +A + L P +N + P T PS
Sbjct: 339 AEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPS 391
Score = 42.0 bits (97), Expect = 3e-04
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 13/126 (10%)
Query: 21 DPPDSRKRPLEAPP------EAGSTKRTNTGEDGQYF-----LKVLIPSYAAGSIIGKGG 69
D +++ PL+ P + GS+++ + G + L++L+P+ G+IIGK G
Sbjct: 156 DEMAAQQNPLQQPRGRRGLGQRGSSRQGSPGSVSKQKPCDLPLRLLVPTQFVGAIIGKEG 215
Query: 70 QTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAK 129
TI + K+T + I + + ++ G E+ I T E +A I E + + Q++
Sbjct: 216 ATIRNITKQTQSKIDVHRKEN--AGAAEKSITILSTPEGTSAACKSILEIMHKEAQDIKF 273
Query: 130 TEPVSI 135
TE + +
Sbjct: 274 TEEIPL 279
Score = 42.0 bits (97), Expect = 3e-04
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 20/138 (14%)
Query: 7 IQQNGTHTGVPIDLDP---PDSRKRP--LEAPPEA---------GSTKRTN---TGEDGQ 49
I+Q G I + P PD++ R + PPEA G K N E+ +
Sbjct: 428 IKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKEENFVSPKEEVK 487
Query: 50 YFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCL-IQGTVEA 108
+ +PS+AAG +IGKGG+T+ +LQ + A + + +D P ++V + I G A
Sbjct: 488 LEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV--PRDQTPDENDQVVVKITGHFYA 545
Query: 109 LNAVHGFIAEKIREMPQN 126
I E + ++ Q+
Sbjct: 546 CQVAQRKIQEILTQVKQH 563
>gi|194306633 poly(rC) binding protein 3 isoform 2 [Homo sapiens]
Length = 345
Score = 48.5 bits (114), Expect = 3e-06
Identities = 22/58 (37%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEAL 109
L++++P+ GS+IGKGG I ++++ TGA +++ + D P +TER I GT +A+
Sbjct: 132 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 187
Score = 45.8 bits (107), Expect = 2e-05
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
Query: 34 PEAGSTKRTNTGEDG---QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 90
P+ G + E G +++L+ GSIIGK G+T+ ++++E+GA I +S+
Sbjct: 27 PQFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG-- 84
Query: 91 FYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQT 140
ER+ I G +A+ IA K E N P + P T
Sbjct: 85 ---NCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVT 131
Score = 35.4 bits (80), Expect = 0.027
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 27 KRPLEAPPEAGSTKRTNTGEDGQ---YFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATI 83
K PL + EA + ++G D ++ IP+ G IIG+ G I ++++ +GA I
Sbjct: 242 KLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQI 301
Query: 84 KLSKSKDFYPGTTERVCLIQGT 105
K++ + + G++ER I GT
Sbjct: 302 KIANATE---GSSERQITITGT 320
>gi|194306631 poly(rC) binding protein 3 isoform 1 [Homo sapiens]
Length = 371
Score = 48.5 bits (114), Expect = 3e-06
Identities = 22/58 (37%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEAL 109
L++++P+ GS+IGKGG I ++++ TGA +++ + D P +TER I GT +A+
Sbjct: 132 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 187
Score = 45.8 bits (107), Expect = 2e-05
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
Query: 34 PEAGSTKRTNTGEDG---QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 90
P+ G + E G +++L+ GSIIGK G+T+ ++++E+GA I +S+
Sbjct: 27 PQFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG-- 84
Query: 91 FYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQT 140
ER+ I G +A+ IA K E N P + P T
Sbjct: 85 ---NCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVT 131
Score = 35.4 bits (80), Expect = 0.027
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 27 KRPLEAPPEAGSTKRTNTGEDGQ---YFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATI 83
K PL + EA + ++G D ++ IP+ G IIG+ G I ++++ +GA I
Sbjct: 268 KLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQI 327
Query: 84 KLSKSKDFYPGTTERVCLIQGT 105
K++ + + G++ER I GT
Sbjct: 328 KIANATE---GSSERQITITGT 346
>gi|56118219 insulin-like growth factor 2 mRNA binding protein 2
isoform b [Homo sapiens]
Length = 556
Score = 47.8 bits (112), Expect = 5e-06
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
LK+L + G +IGK G+ + +++ ETG I +S +D ER ++GTVEA +
Sbjct: 277 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACAS 336
Query: 112 VHGFIAEKIREMPQN 126
I +K+RE +N
Sbjct: 337 AEIEIMKKLREAFEN 351
Score = 47.4 bits (111), Expect = 7e-06
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 108
Q + + IP+ A G+IIGK G I QL + GA+IK++ ++ P +ER+ +I G EA
Sbjct: 384 QEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEA 441
Query: 109 LNAVHGFIAEKIRE 122
G I K++E
Sbjct: 442 QFKAQGRIFGKLKE 455
Score = 41.2 bits (95), Expect = 5e-04
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 24/145 (16%)
Query: 5 APIQQNGTHTGVPIDLDP---PDSRKRP--LEAPPEA---------GSTKRTN---TGED 47
A I+Q G I + P PD +R + PPEA G K N E+
Sbjct: 405 AHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRIFGKLKEENFFNPKEE 464
Query: 48 GQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCL-IQGTV 106
+ + +PS AG +IGKGG+T+ +LQ T A + + +D P E V + I G
Sbjct: 465 VKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV--PRDQTPDENEEVIVRIIGHF 522
Query: 107 EALNAVHGFIAEKIREMPQNVAKTE 131
A KIRE+ Q V + E
Sbjct: 523 FASQTAQ----RKIREIVQQVKQQE 543
Score = 38.9 bits (89), Expect = 0.002
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 22 PPDSRKRPLEAPPEAGSTKR-TNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETG 80
PP +R + E G T+ + L++L+P+ G+IIGK G TI + K+T
Sbjct: 165 PPQRAQRGDHSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQ 224
Query: 81 ATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSI 135
+ + + + ++ G E+ I T E + I E +++ E + +
Sbjct: 225 SRVDIHRKEN--SGAAEKPVTIHATPEGTSEACRMILEIMQKEADETKLAEEIPL 277
>gi|64085377 insulin-like growth factor 2 mRNA binding protein 2
isoform a [Homo sapiens]
Length = 599
Score = 47.8 bits (112), Expect = 5e-06
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
LK+L + G +IGK G+ + +++ ETG I +S +D ER ++GTVEA +
Sbjct: 277 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACAS 336
Query: 112 VHGFIAEKIREMPQN 126
I +K+RE +N
Sbjct: 337 AEIEIMKKLREAFEN 351
Score = 47.4 bits (111), Expect = 7e-06
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 108
Q + + IP+ A G+IIGK G I QL + GA+IK++ ++ P +ER+ +I G EA
Sbjct: 427 QEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEA 484
Query: 109 LNAVHGFIAEKIRE 122
G I K++E
Sbjct: 485 QFKAQGRIFGKLKE 498
Score = 41.2 bits (95), Expect = 5e-04
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 24/145 (16%)
Query: 5 APIQQNGTHTGVPIDLDP---PDSRKRP--LEAPPEA---------GSTKRTN---TGED 47
A I+Q G I + P PD +R + PPEA G K N E+
Sbjct: 448 AHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRIFGKLKEENFFNPKEE 507
Query: 48 GQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCL-IQGTV 106
+ + +PS AG +IGKGG+T+ +LQ T A + + +D P E V + I G
Sbjct: 508 VKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV--PRDQTPDENEEVIVRIIGHF 565
Query: 107 EALNAVHGFIAEKIREMPQNVAKTE 131
A KIRE+ Q V + E
Sbjct: 566 FASQTAQ----RKIREIVQQVKQQE 586
Score = 38.9 bits (89), Expect = 0.002
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 22 PPDSRKRPLEAPPEAGSTKR-TNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETG 80
PP +R + E G T+ + L++L+P+ G+IIGK G TI + K+T
Sbjct: 165 PPQRAQRGDHSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQ 224
Query: 81 ATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSI 135
+ + + + ++ G E+ I T E + I E +++ E + +
Sbjct: 225 SRVDIHRKEN--SGAAEKPVTIHATPEGTSEACRMILEIMQKEADETKLAEEIPL 277
>gi|222352151 poly(rC) binding protein 1 [Homo sapiens]
Length = 356
Score = 47.0 bits (110), Expect = 9e-06
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 11/135 (8%)
Query: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLI----QGTVE 107
L++++P+ GS+IGKGG I ++++ TGA +++ + D P +TER I Q E
Sbjct: 100 LRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGVPQSVTE 157
Query: 108 ALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTV----NPDRIKQTLPSSPTTTKSSPS 163
+ + + E + + PQ T P + + V DR P T
Sbjct: 158 CVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDA-AGYPHATHDLEG 216
Query: 164 DPMTTSRANQKHNIS 178
P+ +H IS
Sbjct: 217 PPLDAYSIQGQHTIS 231
Score = 41.6 bits (96), Expect = 4e-04
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 42 TNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCL 101
T +G + +++L+ GSIIGK G+++ ++++E+GA I +S+ ER+
Sbjct: 6 TESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG-----NCPERIIT 60
Query: 102 IQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTV 142
+ G A+ I +K+ E N + T + +P T+
Sbjct: 61 LTGPTNAIFKAFAMIIDKLEE-DINSSMTNSTAASRPPVTL 100
Score = 30.0 bits (66), Expect = 1.1
Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAV 112
++ IP+ G IIG+ G I ++++ +GA IK++ + G++ R I G+ +++
Sbjct: 283 ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVE---GSSGRQVTITGSAASISLA 339
Query: 113 HGFIAEKI 120
I ++
Sbjct: 340 QYLINARL 347
>gi|238624257 insulin-like growth factor 2 mRNA binding protein 1
isoform 2 [Homo sapiens]
Length = 438
Score = 45.4 bits (106), Expect = 3e-05
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 108
Q ++V IP+ A G+IIGK GQ I QL + A+IK++ + P + R+ +I G EA
Sbjct: 266 QEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPET--PDSKVRMVIITGPPEA 323
Query: 109 LNAVHGFIAEKIRE 122
G I K++E
Sbjct: 324 QFKAQGRIYGKLKE 337
Score = 42.7 bits (99), Expect = 2e-04
Identities = 30/133 (22%), Positives = 61/133 (45%), Gaps = 5/133 (3%)
Query: 39 TKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTER 98
+ R T + + LK+L + G +IGK G+ + +++++T I +S +D ER
Sbjct: 127 SNREQTRQADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPER 186
Query: 99 VCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTT 158
++G +E I +K+RE +N V+ + Q+ + P + P ++
Sbjct: 187 TITVKGAIENCCRAEQEIMKKVREAYEN-----DVAAMSLQSHLIPGLNLAAVGLFPASS 241
Query: 159 KSSPSDPMTTSRA 171
+ P P + + A
Sbjct: 242 SAVPPPPSSVTGA 254
Score = 38.5 bits (88), Expect = 0.003
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 14/83 (16%)
Query: 21 DPPDSRKRP--LEAPPEA---------GSTKRTN---TGEDGQYFLKVLIPSYAAGSIIG 66
+ PDS+ R + PPEA G K N E+ + + +P+ AAG +IG
Sbjct: 306 ETPDSKVRMVIITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIG 365
Query: 67 KGGQTIVQLQKETGATIKLSKSK 89
KGG+T+ +LQ T A + + + +
Sbjct: 366 KGGKTVNELQNLTAAEVVVPRDQ 388
>gi|56237027 insulin-like growth factor 2 mRNA binding protein 1
isoform 1 [Homo sapiens]
Length = 577
Score = 45.4 bits (106), Expect = 3e-05
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 108
Q ++V IP+ A G+IIGK GQ I QL + A+IK++ + P + R+ +I G EA
Sbjct: 405 QEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPET--PDSKVRMVIITGPPEA 462
Query: 109 LNAVHGFIAEKIRE 122
G I K++E
Sbjct: 463 QFKAQGRIYGKLKE 476
Score = 41.2 bits (95), Expect = 5e-04
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 5/120 (4%)
Query: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
LK+L + G +IGK G+ + +++++T I +S +D ER ++G +E
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIENCCR 338
Query: 112 VHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRA 171
I +K+RE +N V+ + Q+ + P + P ++ + P P + + A
Sbjct: 339 AEQEIMKKVREAYEN-----DVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGA 393
Score = 38.5 bits (88), Expect = 0.003
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 25 SRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIK 84
SR +P + P A D L++L+P+ G+IIGK G TI + K+T + I
Sbjct: 173 SRGQPRQGSPVAAGAPAKQQQVDIP--LRLLVPTQYVGAIIGKEGATIRNITKQTQSKID 230
Query: 85 LSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSI 135
+ + ++ G E+ + T E ++ I E + + ++ + V +
Sbjct: 231 VHRKEN--AGAAEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPL 279
Score = 38.5 bits (88), Expect = 0.003
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 14/83 (16%)
Query: 21 DPPDSRKRP--LEAPPEA---------GSTKRTN---TGEDGQYFLKVLIPSYAAGSIIG 66
+ PDS+ R + PPEA G K N E+ + + +P+ AAG +IG
Sbjct: 445 ETPDSKVRMVIITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIG 504
Query: 67 KGGQTIVQLQKETGATIKLSKSK 89
KGG+T+ +LQ T A + + + +
Sbjct: 505 KGGKTVNELQNLTAAEVVVPRDQ 527
>gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo sapiens]
Length = 2603
Score = 45.4 bits (106), Expect = 3e-05
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 18/138 (13%)
Query: 32 APPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF 91
A P+ G + E + KV +PS +IG+GG I +++ TGA I + K KD
Sbjct: 1708 ASPKRGQKREEGWKEVVRRSKKVSVPSTVISRVIGRGGCNINAIREFTGAHIDIDKQKD- 1766
Query: 92 YPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTL 151
T +R+ I+G E+ I I++ + + + P K L
Sbjct: 1767 --KTGDRIITIRGGTESTRQATQLINALIKDPDKEIDELIP---------------KNRL 1809
Query: 152 PSSPTTTKSSPSDPMTTS 169
SS +K S P TT+
Sbjct: 1810 KSSSANSKIGSSAPTTTA 1827
>gi|38683816 ankyrin repeat domain protein 17 isoform b [Homo sapiens]
Length = 2352
Score = 45.4 bits (106), Expect = 3e-05
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 18/138 (13%)
Query: 32 APPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF 91
A P+ G + E + KV +PS +IG+GG I +++ TGA I + K KD
Sbjct: 1457 ASPKRGQKREEGWKEVVRRSKKVSVPSTVISRVIGRGGCNINAIREFTGAHIDIDKQKD- 1515
Query: 92 YPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTL 151
T +R+ I+G E+ I I++ + + + P K L
Sbjct: 1516 --KTGDRIITIRGGTESTRQATQLINALIKDPDKEIDELIP---------------KNRL 1558
Query: 152 PSSPTTTKSSPSDPMTTS 169
SS +K S P TT+
Sbjct: 1559 KSSSANSKIGSSAPTTTA 1576
>gi|14670373 poly(rC) binding protein 4 isoform c [Homo sapiens]
Length = 403
Score = 43.9 bits (102), Expect = 8e-05
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
L+++IP+ GS+IGK G I ++++ TGA +++ + D P +TER + G +A+
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDAIIL 161
Query: 112 VHGFIAEKIREMP 124
I I E P
Sbjct: 162 CVRQICAVILESP 174
Score = 36.6 bits (83), Expect = 0.012
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
L++L+ GSIIGK G+T+ ++++++ A I +S+ ER+ I G+ A+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG-----SCPERITTITGSTAAVFH 74
Query: 112 VHGFIAEKIRE 122
IA K+ E
Sbjct: 75 AVSMIAFKLDE 85
Score = 29.6 bits (65), Expect = 1.5
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 55 LIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGT 105
L+P+ G +IG+ G I ++++ +GA IK+ + G ER I G+
Sbjct: 247 LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGS 294
>gi|14670369 poly(rC) binding protein 4 isoform c [Homo sapiens]
Length = 403
Score = 43.9 bits (102), Expect = 8e-05
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
L+++IP+ GS+IGK G I ++++ TGA +++ + D P +TER + G +A+
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDAIIL 161
Query: 112 VHGFIAEKIREMP 124
I I E P
Sbjct: 162 CVRQICAVILESP 174
Score = 36.6 bits (83), Expect = 0.012
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
L++L+ GSIIGK G+T+ ++++++ A I +S+ ER+ I G+ A+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG-----SCPERITTITGSTAAVFH 74
Query: 112 VHGFIAEKIRE 122
IA K+ E
Sbjct: 75 AVSMIAFKLDE 85
Score = 29.6 bits (65), Expect = 1.5
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 55 LIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGT 105
L+P+ G +IG+ G I ++++ +GA IK+ + G ER I G+
Sbjct: 247 LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTITGS 294
>gi|193083114 poly(rC) binding protein 2 isoform g [Homo sapiens]
Length = 318
Score = 43.5 bits (101), Expect = 1e-04
Identities = 20/58 (34%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEAL 109
L++++P+ GS+IGKGG I ++++ TGA +++ + D P +TER I G +++
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 155
Score = 39.3 bits (90), Expect = 0.002
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
+++L+ GSIIGK G+++ ++++E+GA I +S+ ER+ + G A+
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG-----NCPERIITLAGPTNAIFK 70
Query: 112 VHGFIAEKIRE 122
I +K+ E
Sbjct: 71 AFAMIIDKLEE 81
Score = 32.0 bits (71), Expect = 0.30
Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALN 110
++ IP+ G IIG+ G I ++++ +GA IK++ + G+T+R I G+ +++
Sbjct: 244 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTITGSAASIS 298
>gi|193083112 poly(rC) binding protein 2 isoform f [Homo sapiens]
Length = 335
Score = 43.5 bits (101), Expect = 1e-04
Identities = 20/58 (34%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEAL 109
L++++P+ GS+IGKGG I ++++ TGA +++ + D P +TER I G +++
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 155
Score = 39.3 bits (90), Expect = 0.002
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
+++L+ GSIIGK G+++ ++++E+GA I +S+ ER+ + G A+
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG-----NCPERIITLAGPTNAIFK 70
Query: 112 VHGFIAEKIRE 122
I +K+ E
Sbjct: 71 AFAMIIDKLEE 81
Score = 32.0 bits (71), Expect = 0.30
Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALN 110
++ IP+ G IIG+ G I ++++ +GA IK++ + G+T+R I G+ +++
Sbjct: 261 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTITGSAASIS 315
>gi|193083110 poly(rC) binding protein 2 isoform e [Homo sapiens]
Length = 361
Score = 43.5 bits (101), Expect = 1e-04
Identities = 20/58 (34%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEAL 109
L++++P+ GS+IGKGG I ++++ TGA +++ + D P +TER I G +++
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 155
Score = 39.3 bits (90), Expect = 0.002
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
+++L+ GSIIGK G+++ ++++E+GA I +S+ ER+ + G A+
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG-----NCPERIITLAGPTNAIFK 70
Query: 112 VHGFIAEKIRE 122
I +K+ E
Sbjct: 71 AFAMIIDKLEE 81
Score = 32.0 bits (71), Expect = 0.30
Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALN 110
++ IP+ G IIG+ G I ++++ +GA IK++ + G+T+R I G+ +++
Sbjct: 287 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTITGSAASIS 341
>gi|193083108 poly(rC) binding protein 2 isoform d [Homo sapiens]
Length = 365
Score = 43.5 bits (101), Expect = 1e-04
Identities = 20/58 (34%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEAL 109
L++++P+ GS+IGKGG I ++++ TGA +++ + D P +TER I G +++
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 155
Score = 39.3 bits (90), Expect = 0.002
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
+++L+ GSIIGK G+++ ++++E+GA I +S+ ER+ + G A+
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG-----NCPERIITLAGPTNAIFK 70
Query: 112 VHGFIAEKIRE 122
I +K+ E
Sbjct: 71 AFAMIIDKLEE 81
Score = 32.0 bits (71), Expect = 0.30
Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALN 110
++ IP+ G IIG+ G I ++++ +GA IK++ + G+T+R I G+ +++
Sbjct: 291 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTITGSAASIS 345
>gi|14141166 poly(rC) binding protein 2 isoform b [Homo sapiens]
Length = 362
Score = 43.5 bits (101), Expect = 1e-04
Identities = 20/58 (34%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEAL 109
L++++P+ GS+IGKGG I ++++ TGA +++ + D P +TER I G +++
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 155
Score = 39.3 bits (90), Expect = 0.002
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
+++L+ GSIIGK G+++ ++++E+GA I +S+ ER+ + G A+
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG-----NCPERIITLAGPTNAIFK 70
Query: 112 VHGFIAEKIRE 122
I +K+ E
Sbjct: 71 AFAMIIDKLEE 81
Score = 32.0 bits (71), Expect = 0.30
Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALN 110
++ IP+ G IIG+ G I ++++ +GA IK++ + G+T+R I G+ +++
Sbjct: 288 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTITGSAASIS 342
>gi|14141168 poly(rC) binding protein 2 isoform a [Homo sapiens]
Length = 366
Score = 43.5 bits (101), Expect = 1e-04
Identities = 20/58 (34%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEAL 109
L++++P+ GS+IGKGG I ++++ TGA +++ + D P +TER I G +++
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 155
Score = 39.3 bits (90), Expect = 0.002
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
+++L+ GSIIGK G+++ ++++E+GA I +S+ ER+ + G A+
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG-----NCPERIITLAGPTNAIFK 70
Query: 112 VHGFIAEKIRE 122
I +K+ E
Sbjct: 71 AFAMIIDKLEE 81
Score = 32.0 bits (71), Expect = 0.30
Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALN 110
++ IP+ G IIG+ G I ++++ +GA IK++ + G+T+R I G+ +++
Sbjct: 292 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTITGSAASIS 346
>gi|148833484 poly(rC) binding protein 2 isoform c [Homo sapiens]
Length = 331
Score = 43.5 bits (101), Expect = 1e-04
Identities = 20/58 (34%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEAL 109
L++++P+ GS+IGKGG I ++++ TGA +++ + D P +TER I G +++
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 155
Score = 39.3 bits (90), Expect = 0.002
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
+++L+ GSIIGK G+++ ++++E+GA I +S+ ER+ + G A+
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG-----NCPERIITLAGPTNAIFK 70
Query: 112 VHGFIAEKIRE 122
I +K+ E
Sbjct: 71 AFAMIIDKLEE 81
Score = 32.0 bits (71), Expect = 0.30
Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALN 110
++ IP+ G IIG+ G I ++++ +GA IK++ + G+T+R I G+ +++
Sbjct: 257 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTITGSAASIS 311
>gi|145312259 tudor and KH domain containing isoform a [Homo
sapiens]
Length = 561
Score = 43.5 bits (101), Expect = 1e-04
Identities = 46/185 (24%), Positives = 77/185 (41%), Gaps = 26/185 (14%)
Query: 5 APIQQNGTHTGVPIDLDPPDSRKR--------PLEAPPEAGSTKRTNTGEDGQYFLKVLI 56
A I+Q TG ID+D D P++ + + T E+ ++ +
Sbjct: 73 ANIKQLRKQTGARIDVDTEDVGDERVLLISGFPVQVCKAKAAIHQILT-ENTPVSEQLSV 131
Query: 57 PSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGT--TERVCLIQGTVEALNAVHG 114
P + G IIG+GG+TI + K +GA I K + GT R+ I GT + + A
Sbjct: 132 PQRSVGRIIGRGGETIRSICKASGAKITCDKESE---GTLLLSRLIKISGTQKEVAAAKH 188
Query: 115 FIAEKIREMPQ-----------NVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPS 163
I EK+ E + V + +P+S+ + T P + T++ P+
Sbjct: 189 LILEKVSEDEELRKRIAHSAETRVPRKQPISVRREDMT-EPGGAGEPALWKNTSSSMEPT 247
Query: 164 DPMTT 168
P+ T
Sbjct: 248 APLVT 252
Score = 37.4 bits (85), Expect = 0.007
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 35 EAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPG 94
E+ + T GED +++ +P A IIG+ G I QL+K+TGA I + D
Sbjct: 39 ESREERLTFVGED-DIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV----DTEDV 93
Query: 95 TTERVCLIQG----TVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTV 142
ERV LI G +A A+H + E N +E +S+ PQ +V
Sbjct: 94 GDERVLLISGFPVQVCKAKAAIHQILTE-------NTPVSEQLSV--PQRSV 136
>gi|145312270 tudor and KH domain containing isoform a [Homo
sapiens]
Length = 561
Score = 43.5 bits (101), Expect = 1e-04
Identities = 46/185 (24%), Positives = 77/185 (41%), Gaps = 26/185 (14%)
Query: 5 APIQQNGTHTGVPIDLDPPDSRKR--------PLEAPPEAGSTKRTNTGEDGQYFLKVLI 56
A I+Q TG ID+D D P++ + + T E+ ++ +
Sbjct: 73 ANIKQLRKQTGARIDVDTEDVGDERVLLISGFPVQVCKAKAAIHQILT-ENTPVSEQLSV 131
Query: 57 PSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGT--TERVCLIQGTVEALNAVHG 114
P + G IIG+GG+TI + K +GA I K + GT R+ I GT + + A
Sbjct: 132 PQRSVGRIIGRGGETIRSICKASGAKITCDKESE---GTLLLSRLIKISGTQKEVAAAKH 188
Query: 115 FIAEKIREMPQ-----------NVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPS 163
I EK+ E + V + +P+S+ + T P + T++ P+
Sbjct: 189 LILEKVSEDEELRKRIAHSAETRVPRKQPISVRREDMT-EPGGAGEPALWKNTSSSMEPT 247
Query: 164 DPMTT 168
P+ T
Sbjct: 248 APLVT 252
Score = 37.4 bits (85), Expect = 0.007
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 35 EAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPG 94
E+ + T GED +++ +P A IIG+ G I QL+K+TGA I + D
Sbjct: 39 ESREERLTFVGED-DIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV----DTEDV 93
Query: 95 TTERVCLIQG----TVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTV 142
ERV LI G +A A+H + E N +E +S+ PQ +V
Sbjct: 94 GDERVLLISGFPVQVCKAKAAIHQILTE-------NTPVSEQLSV--PQRSV 136
>gi|145312256 tudor and KH domain containing isoform a [Homo
sapiens]
Length = 561
Score = 43.5 bits (101), Expect = 1e-04
Identities = 46/185 (24%), Positives = 77/185 (41%), Gaps = 26/185 (14%)
Query: 5 APIQQNGTHTGVPIDLDPPDSRKR--------PLEAPPEAGSTKRTNTGEDGQYFLKVLI 56
A I+Q TG ID+D D P++ + + T E+ ++ +
Sbjct: 73 ANIKQLRKQTGARIDVDTEDVGDERVLLISGFPVQVCKAKAAIHQILT-ENTPVSEQLSV 131
Query: 57 PSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGT--TERVCLIQGTVEALNAVHG 114
P + G IIG+GG+TI + K +GA I K + GT R+ I GT + + A
Sbjct: 132 PQRSVGRIIGRGGETIRSICKASGAKITCDKESE---GTLLLSRLIKISGTQKEVAAAKH 188
Query: 115 FIAEKIREMPQ-----------NVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPS 163
I EK+ E + V + +P+S+ + T P + T++ P+
Sbjct: 189 LILEKVSEDEELRKRIAHSAETRVPRKQPISVRREDMT-EPGGAGEPALWKNTSSSMEPT 247
Query: 164 DPMTT 168
P+ T
Sbjct: 248 APLVT 252
Score = 37.4 bits (85), Expect = 0.007
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 35 EAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPG 94
E+ + T GED +++ +P A IIG+ G I QL+K+TGA I + D
Sbjct: 39 ESREERLTFVGED-DIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV----DTEDV 93
Query: 95 TTERVCLIQG----TVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTV 142
ERV LI G +A A+H + E N +E +S+ PQ +V
Sbjct: 94 GDERVLLISGFPVQVCKAKAAIHQILTE-------NTPVSEQLSV--PQRSV 136
>gi|17402900 far upstream element-binding protein [Homo sapiens]
Length = 644
Score = 42.4 bits (98), Expect = 2e-04
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 19/116 (16%)
Query: 19 DLDPPDSRKRP-------LEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQT 71
D D PD++K + PP R+ E+ + +P G IIG+GG+
Sbjct: 69 DGDQPDAKKVAPQNDSFGTQLPPMHQQQSRSVMTEEYK------VPDGMVGFIIGRGGEQ 122
Query: 72 IVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGF---IAEKIREMP 124
I ++Q+E+G I+++ G ER C++ GT E++ + I EK R P
Sbjct: 123 ISRIQQESGCKIQIAPDSG---GLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAP 175
Score = 42.4 bits (98), Expect = 2e-04
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 55 LIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHG 114
++P+ G IIGKGG+TI + +++GA I+L ++ ++ I+GT + ++
Sbjct: 382 IVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQ 441
Query: 115 FIAEKI 120
I EKI
Sbjct: 442 LIEEKI 447
Score = 38.1 bits (87), Expect = 0.004
Identities = 36/143 (25%), Positives = 58/143 (40%), Gaps = 19/143 (13%)
Query: 48 GQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGT-TERVCLIQGTV 106
G +++IP+ AG +IGKGG+TI QLQ+ G +K+ +D T ++ I G
Sbjct: 184 GNAVQEIMIPASKAGLVIGKGGETIKQLQERAG--VKMVMIQDGPQNTGADKPLRITGDP 241
Query: 107 EALNAVHGFIAEKIR----------EMPQNVAKTEPVSILQPQTTV------NPDRIKQT 150
+ + E IR E + E + + P+ V N + IK+
Sbjct: 242 YKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKI 301
Query: 151 LPSSPTTTKSSPSDPMTTSRANQ 173
+ + P D T R Q
Sbjct: 302 QNDAGVRIQFKPDDGTTPERIAQ 324
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.127 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,872,938
Number of Sequences: 37866
Number of extensions: 364648
Number of successful extensions: 1781
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 1435
Number of HSP's gapped (non-prelim): 388
length of query: 181
length of database: 18,247,518
effective HSP length: 96
effective length of query: 85
effective length of database: 14,612,382
effective search space: 1242052470
effective search space used: 1242052470
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.