Search of human proteins with 6005934

Search of human proteins with 6005934

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|6005934 upstream stimulatory factor 1 isoform 1 [Homo
sapiens]
         (310 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|6005934 upstream stimulatory factor 1 isoform 1 [Homo sapiens]     613   e-176
gi|46877102 upstream stimulatory factor 1 isoform 2 [Homo sapiens]    499   e-141
gi|4507847 upstream stimulatory factor 2 isoform 1 [Homo sapiens]     303   1e-82
gi|46877105 upstream stimulatory factor 2 isoform 2 [Homo sapiens]    271   5e-73
gi|27477113 sterol regulatory element-binding transcription fact...    58   9e-09
gi|21704261 MAX protein isoform a [Homo sapiens]                       58   1e-08
gi|4557755 microphthalmia-associated transcription factor isofor...    56   4e-08
gi|21704263 MAX protein isoform b [Homo sapiens]                       56   4e-08
gi|38156705 microphthalmia-associated transcription factor isofo...    56   5e-08
gi|38156703 microphthalmia-associated transcription factor isofo...    56   5e-08
gi|38156701 microphthalmia-associated transcription factor isofo...    56   5e-08
gi|38156699 microphthalmia-associated transcription factor isofo...    56   5e-08
gi|38156697 microphthalmia-associated transcription factor isofo...    56   5e-08
gi|21704269 MAX protein isoform e [Homo sapiens]                       56   5e-08
gi|21704265 MAX protein isoform c [Homo sapiens]                       56   5e-08
gi|8659574 transcription factor E3 [Homo sapiens]                      53   4e-07
gi|52630419 sterol regulatory element binding transcription fact...    51   1e-06
gi|22547195 sterol regulatory element binding transcription fact...    51   1e-06
gi|114431248 hypothetical protein LOC205717 [Homo sapiens]             51   1e-06
gi|38201614 transcription factor-like protein 4 isoform alpha [H...    51   1e-06
gi|38201612 transcription factor-like protein 4 isoform beta [Ho...    49   4e-06
gi|24586667 transcription factor-like protein 4 isoform gamma [H...    49   4e-06
gi|24307933 transcription factor EB [Homo sapiens]                     48   1e-05
gi|30795240 aryl hydrocarbon receptor nuclear translocator isofo...    45   1e-04
gi|4502231 aryl hydrocarbon receptor nuclear translocator isofor...    45   1e-04
gi|64762402 transcription factor EC isoform b [Homo sapiens]           44   1e-04
gi|6912702 transcription factor EC isoform a [Homo sapiens]            44   1e-04
gi|71852582 aryl hydrocarbon receptor nuclear translocator-like ...    44   2e-04
gi|71852580 aryl hydrocarbon receptor nuclear translocator-like ...    44   2e-04
gi|42716311 aryl hydrocarbon receptor nuclear translocator-like ...    44   2e-04

>gi|6005934 upstream stimulatory factor 1 isoform 1 [Homo sapiens]
          Length = 310

 Score =  613 bits (1580), Expect = e-176
 Identities = 310/310 (100%), Positives = 310/310 (100%)

Query: 1   MKGQQKTAETEEGTVQIQEGAVATGEDPTSVAIASIQSAATFPDPNVKYVFRTENGGQVM 60
           MKGQQKTAETEEGTVQIQEGAVATGEDPTSVAIASIQSAATFPDPNVKYVFRTENGGQVM
Sbjct: 1   MKGQQKTAETEEGTVQIQEGAVATGEDPTSVAIASIQSAATFPDPNVKYVFRTENGGQVM 60

Query: 61  YRVIQVSEGQLDGQTEGTGAISGYPATQSMTQAVIQGAFTSDDAVDTEGTAAETHYTYFP 120
           YRVIQVSEGQLDGQTEGTGAISGYPATQSMTQAVIQGAFTSDDAVDTEGTAAETHYTYFP
Sbjct: 61  YRVIQVSEGQLDGQTEGTGAISGYPATQSMTQAVIQGAFTSDDAVDTEGTAAETHYTYFP 120

Query: 121 STAVGDGAGGTTSGSTAAVVTTQGSEALLGQATPPGTGQFFVMMSPQEVLQGGSQRSIAP 180
           STAVGDGAGGTTSGSTAAVVTTQGSEALLGQATPPGTGQFFVMMSPQEVLQGGSQRSIAP
Sbjct: 121 STAVGDGAGGTTSGSTAAVVTTQGSEALLGQATPPGTGQFFVMMSPQEVLQGGSQRSIAP 180

Query: 181 RTHPYSPKSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSK 240
           RTHPYSPKSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSK
Sbjct: 181 RTHPYSPKSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSK 240

Query: 241 GGILSKACDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLRAQLRHHG 300
           GGILSKACDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLRAQLRHHG
Sbjct: 241 GGILSKACDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLRAQLRHHG 300

Query: 301 LEVVIKNDSN 310
           LEVVIKNDSN
Sbjct: 301 LEVVIKNDSN 310


>gi|46877102 upstream stimulatory factor 1 isoform 2 [Homo sapiens]
          Length = 251

 Score =  499 bits (1284), Expect = e-141
 Identities = 251/251 (100%), Positives = 251/251 (100%)

Query: 60  MYRVIQVSEGQLDGQTEGTGAISGYPATQSMTQAVIQGAFTSDDAVDTEGTAAETHYTYF 119
           MYRVIQVSEGQLDGQTEGTGAISGYPATQSMTQAVIQGAFTSDDAVDTEGTAAETHYTYF
Sbjct: 1   MYRVIQVSEGQLDGQTEGTGAISGYPATQSMTQAVIQGAFTSDDAVDTEGTAAETHYTYF 60

Query: 120 PSTAVGDGAGGTTSGSTAAVVTTQGSEALLGQATPPGTGQFFVMMSPQEVLQGGSQRSIA 179
           PSTAVGDGAGGTTSGSTAAVVTTQGSEALLGQATPPGTGQFFVMMSPQEVLQGGSQRSIA
Sbjct: 61  PSTAVGDGAGGTTSGSTAAVVTTQGSEALLGQATPPGTGQFFVMMSPQEVLQGGSQRSIA 120

Query: 180 PRTHPYSPKSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQS 239
           PRTHPYSPKSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQS
Sbjct: 121 PRTHPYSPKSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQS 180

Query: 240 KGGILSKACDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLRAQLRHH 299
           KGGILSKACDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLRAQLRHH
Sbjct: 181 KGGILSKACDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLRAQLRHH 240

Query: 300 GLEVVIKNDSN 310
           GLEVVIKNDSN
Sbjct: 241 GLEVVIKNDSN 251


>gi|4507847 upstream stimulatory factor 2 isoform 1 [Homo sapiens]
          Length = 346

 Score =  303 bits (776), Expect = 1e-82
 Identities = 172/334 (51%), Positives = 221/334 (66%), Gaps = 52/334 (15%)

Query: 6   KTAETEEGTVQIQEGAVATG-EDPTSVAIASIQSAATFPDPNVKYVFRTE-NGGQVMYRV 63
           K  E EEG V++QEG    G E+ T+VAI S+Q AA F D N++Y FRTE NGGQV YRV
Sbjct: 24  KGPEAEEG-VELQEGGDGPGAEEQTAVAITSVQQAA-FGDHNIQYQFRTETNGGQVTYRV 81

Query: 64  IQVSEGQLDGQTEGTGAISGYPAT------QSMTQ------------------------- 92
           +QV++GQLDGQ +  GA+S           Q++TQ                         
Sbjct: 82  VQVTDGQLDGQGDTAGAVSVVSTAAFAGGQQAVTQVGVDGAAQRPGPAAASVPPGPAAPF 141

Query: 93  --AVIQGAFTSDDAVDTEGTAAETHYTYFPSTAVGDGAGGTTSGSTAAVVTTQGSEALLG 150
             AVIQ  F++  +   E  + E  + YFP+++VGD        +TA  V T       G
Sbjct: 142 PLAVIQNPFSNGGSPAAEAVSGEARFAYFPASSVGD--------TTAVSVQTTDQSLQAG 193

Query: 151 QATPPGTGQFFVMMSPQEVLQGGSQRSIAPRTHPYSPKSEAPRTTRDEKRRAQHNEVERR 210
                  GQF+VMM+PQ+VLQ G+QR+IAPRTHPYSPK +  RT RDE+RRAQHNEVERR
Sbjct: 194 -------GQFYVMMTPQDVLQTGTQRTIAPRTHPYSPKIDGTRTPRDERRRAQHNEVERR 246

Query: 211 RRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELRQSNHRLSEELQGLDQ 270
           RRDKINNWIVQLSKIIPDC+ +++K+G SKGGILSKACDYI+ELRQ+N R+ E  +  ++
Sbjct: 247 RRDKINNWIVQLSKIIPDCNADNSKTGASKGGILSKACDYIRELRQTNQRMQETFKEAER 306

Query: 271 LQLDNDVLRQQVEDLKNKNLLLRAQLRHHGLEVV 304
           LQ+DN++LRQQ+E+LKN+N LLRAQL+ H LE+V
Sbjct: 307 LQMDNELLRQQIEELKNENALLRAQLQQHNLEMV 340


>gi|46877105 upstream stimulatory factor 2 isoform 2 [Homo sapiens]
          Length = 279

 Score =  271 bits (693), Expect = 5e-73
 Identities = 154/301 (51%), Positives = 196/301 (65%), Gaps = 53/301 (17%)

Query: 6   KTAETEEGTVQIQEGAVATG-EDPTSVAIASIQSAATFPDPNVKYVFRTE-NGGQVMYRV 63
           K  E EEG V++QEG    G E+ T+VAI S+Q AA F D N++Y FRTE NGGQ     
Sbjct: 24  KGPEAEEG-VELQEGGDGPGAEEQTAVAITSVQQAA-FGDHNIQYQFRTETNGGQ----- 76

Query: 64  IQVSEGQLDGQTEGTGAISGYPATQSMTQAVIQGAFTSDDAVDTEGTAAETHYTYFPSTA 123
                                        AVIQ  F++  +   E  + E  + YFP+++
Sbjct: 77  -----------------------------AVIQNPFSNGGSPAAEAVSGEARFAYFPASS 107

Query: 124 VGDGAGGTTSGSTAAVVTTQGSEALLGQATPPGTGQFFVMMSPQEVLQGGSQRSIAPRTH 183
           VGD        +TA  V T       G       GQF+VMM+PQ+VLQ G+QR+IAPRTH
Sbjct: 108 VGD--------TTAVSVQTTDQSLQAG-------GQFYVMMTPQDVLQTGTQRTIAPRTH 152

Query: 184 PYSPKSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGI 243
           PYSPK +  RT RDE+RRAQHNEVERRRRDKINNWIVQLSKIIPDC+ +++K+G SKGGI
Sbjct: 153 PYSPKIDGTRTPRDERRRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNSKTGASKGGI 212

Query: 244 LSKACDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLRAQLRHHGLEV 303
           LSKACDYI+ELRQ+N R+ E  +  ++LQ+DN++LRQQ+E+LKN+N LLRAQL+ H LE+
Sbjct: 213 LSKACDYIRELRQTNQRMQETFKEAERLQMDNELLRQQIEELKNENALLRAQLQQHNLEM 272

Query: 304 V 304
           V
Sbjct: 273 V 273


>gi|27477113 sterol regulatory element-binding transcription factor
           2 [Homo sapiens]
          Length = 1141

 Score = 58.2 bits (139), Expect = 9e-09
 Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 23/152 (15%)

Query: 154 PPGTGQFFVMMSPQEVLQGGSQRSIAPRTHPYSPKSEAPRTTRDEKRRAQHNEVERRRRD 213
           P   G    +++   V+ G  Q  +  +  P   K   P   ++ +RR  HN +E+R R 
Sbjct: 289 PTLVGSSGTILTTMPVMMG--QEKVPIKQVPGGVKQLEP--PKEGERRTTHNIIEKRYRS 344

Query: 214 KINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELRQSNHRLSEE--------- 264
            IN+ I++L  ++       T +   K G+L KA DYI+ L+Q NH+L +E         
Sbjct: 345 SINDKIIELKDLVM-----GTDAKMHKSGVLRKAIDYIKYLQQVNHKLRQENMVLKLANQ 399

Query: 265 ----LQGLDQLQLDNDVLRQQVEDLKNKNLLL 292
               L+G+D   L ++ +  ++ED  N+N+LL
Sbjct: 400 KNKLLKGIDLGSLVDNEVDLKIEDF-NQNVLL 430


>gi|21704261 MAX protein isoform a [Homo sapiens]
          Length = 160

 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 7/97 (7%)

Query: 190 EAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACD 249
           E PR      +RA HN +ER+RRD I +    L   +P  S++  K+  S+  IL KA +
Sbjct: 14  EQPRFQSAADKRAHHNALERKRRDHIKDSFHSLRDSVP--SLQGEKA--SRAQILDKATE 69

Query: 250 YIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLK 286
           YIQ +R+ NH      Q +D L+  N +L QQV  L+
Sbjct: 70  YIQYMRRKNH---THQQDIDDLKRQNALLEQQVRALE 103


>gi|4557755 microphthalmia-associated transcription factor isoform 4
           [Homo sapiens]
          Length = 419

 Score = 56.2 bits (134), Expect = 4e-08
 Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 19/125 (15%)

Query: 185 YSPKSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGIL 244
           +  +SEA    ++ +++  HN +ERRRR  IN+ I +L  +IP  +    +   +KG IL
Sbjct: 190 FPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMR--WNKGTIL 247

Query: 245 SKACDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLR-----AQLRHH 299
             + DYI++L++   R  E         L+N   RQ+  +  N++LLLR      Q R H
Sbjct: 248 KASVDYIRKLQREQQRAKE---------LEN---RQKKLEHANRHLLLRIQELEMQARAH 295

Query: 300 GLEVV 304
           GL ++
Sbjct: 296 GLSLI 300


>gi|21704263 MAX protein isoform b [Homo sapiens]
          Length = 151

 Score = 56.2 bits (134), Expect = 4e-08
 Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 7/90 (7%)

Query: 197 DEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELRQ 256
           D  +RA HN +ER+RRD I +    L   +P  S++  K+  S+  IL KA +YIQ +R+
Sbjct: 12  DADKRAHHNALERKRRDHIKDSFHSLRDSVP--SLQGEKA--SRAQILDKATEYIQYMRR 67

Query: 257 SNHRLSEELQGLDQLQLDNDVLRQQVEDLK 286
            NH      Q +D L+  N +L QQV  L+
Sbjct: 68  KNH---THQQDIDDLKRQNALLEQQVRALE 94


>gi|38156705 microphthalmia-associated transcription factor isoform
           6 [Homo sapiens]
          Length = 495

 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 19/122 (15%)

Query: 188 KSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKA 247
           +SEA    ++ +++  HN +ERRRR  IN+ I +L  +IP  +    +   +KG IL  +
Sbjct: 269 ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMR--WNKGTILKAS 326

Query: 248 CDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLR-----AQLRHHGLE 302
            DYI++L++   R  E         L+N   RQ+  +  N++LLLR      Q R HGL 
Sbjct: 327 VDYIRKLQREQQRAKE---------LEN---RQKKLEHANRHLLLRIQELEMQARAHGLS 374

Query: 303 VV 304
           ++
Sbjct: 375 LI 376


>gi|38156703 microphthalmia-associated transcription factor isoform
           2 [Homo sapiens]
          Length = 504

 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 19/122 (15%)

Query: 188 KSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKA 247
           +SEA    ++ +++  HN +ERRRR  IN+ I +L  +IP  +    +   +KG IL  +
Sbjct: 278 ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMR--WNKGTILKAS 335

Query: 248 CDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLR-----AQLRHHGLE 302
            DYI++L++   R  E         L+N   RQ+  +  N++LLLR      Q R HGL 
Sbjct: 336 VDYIRKLQREQQRAKE---------LEN---RQKKLEHANRHLLLRIQELEMQARAHGLS 383

Query: 303 VV 304
           ++
Sbjct: 384 LI 385


>gi|38156701 microphthalmia-associated transcription factor isoform
           3 [Homo sapiens]
          Length = 519

 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 19/122 (15%)

Query: 188 KSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKA 247
           +SEA    ++ +++  HN +ERRRR  IN+ I +L  +IP  +    +   +KG IL  +
Sbjct: 293 ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMR--WNKGTILKAS 350

Query: 248 CDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLR-----AQLRHHGLE 302
            DYI++L++   R  E         L+N   RQ+  +  N++LLLR      Q R HGL 
Sbjct: 351 VDYIRKLQREQQRAKE---------LEN---RQKKLEHANRHLLLRIQELEMQARAHGLS 398

Query: 303 VV 304
           ++
Sbjct: 399 LI 400


>gi|38156699 microphthalmia-associated transcription factor isoform
           1 [Homo sapiens]
          Length = 520

 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 19/122 (15%)

Query: 188 KSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKA 247
           +SEA    ++ +++  HN +ERRRR  IN+ I +L  +IP  +    +   +KG IL  +
Sbjct: 294 ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMR--WNKGTILKAS 351

Query: 248 CDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLR-----AQLRHHGLE 302
            DYI++L++   R  E         L+N   RQ+  +  N++LLLR      Q R HGL 
Sbjct: 352 VDYIRKLQREQQRAKE---------LEN---RQKKLEHANRHLLLRIQELEMQARAHGLS 399

Query: 303 VV 304
           ++
Sbjct: 400 LI 401


>gi|38156697 microphthalmia-associated transcription factor isoform
           5 [Homo sapiens]
          Length = 413

 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 19/122 (15%)

Query: 188 KSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKA 247
           +SEA    ++ +++  HN +ERRRR  IN+ I +L  +IP  +    +   +KG IL  +
Sbjct: 187 ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMR--WNKGTILKAS 244

Query: 248 CDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLR-----AQLRHHGLE 302
            DYI++L++   R  E         L+N   RQ+  +  N++LLLR      Q R HGL 
Sbjct: 245 VDYIRKLQREQQRAKE---------LEN---RQKKLEHANRHLLLRIQELEMQARAHGLS 292

Query: 303 VV 304
           ++
Sbjct: 293 LI 294


>gi|21704269 MAX protein isoform e [Homo sapiens]
          Length = 134

 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 190 EAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACD 249
           E PR      +RA HN +ER+RRD I +    L   +P  S++  K+  S+  IL KA +
Sbjct: 14  EQPRFQSAADKRAHHNALERKRRDHIKDSFHSLRDSVP--SLQGEKA--SRAQILDKATE 69

Query: 250 YIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVE 283
           YIQ +R+ NH      Q +D L+  N +L QQ E
Sbjct: 70  YIQYMRRKNH---THQQDIDDLKRQNALLEQQGE 100


>gi|21704265 MAX protein isoform c [Homo sapiens]
          Length = 103

 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 190 EAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACD 249
           E PR      +RA HN +ER+RRD I +    L   +P  S++  K+  S+  IL KA +
Sbjct: 14  EQPRFQSAADKRAHHNALERKRRDHIKDSFHSLRDSVP--SLQGEKA--SRAQILDKATE 69

Query: 250 YIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVE 283
           YIQ +R+ NH      Q +D L+  N +L QQ E
Sbjct: 70  YIQYMRRKNH---THQQDIDDLKRQNALLEQQGE 100


>gi|8659574 transcription factor E3 [Homo sapiens]
          Length = 575

 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 9/116 (7%)

Query: 188 KSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKA 247
           ++EA    ++ +++  HN +ERRRR  IN+ I +L  +IP  S    +   +KG IL  +
Sbjct: 335 ETEAKALLKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSS--DPEMRWNKGTILKAS 392

Query: 248 CDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLRAQLRHHGLEV 303
            DYI++L++   R  +       L+  N  L+ ++++L+     L+AQ+  HGL V
Sbjct: 393 VDYIRKLQKEQQRSKDLESRQRSLEQANRSLQLRIQELE-----LQAQI--HGLPV 441


>gi|52630419 sterol regulatory element binding transcription factor
           1 isoform a [Homo sapiens]
          Length = 1177

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)

Query: 188 KSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKA 247
           K+ A   +R EKR A HN +E+R R  IN+ I++L  ++       T++  +K  +L KA
Sbjct: 343 KAPASAQSRGEKRTA-HNAIEKRYRSSINDKIIELKDLV-----VGTEAKLNKSAVLRKA 396

Query: 248 CDYIQELRQSNHRLSEE 264
            DYI+ L+ SN +L +E
Sbjct: 397 IDYIRFLQHSNQKLKQE 413


>gi|22547195 sterol regulatory element binding transcription factor
           1 isoform b [Homo sapiens]
          Length = 1147

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)

Query: 188 KSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKA 247
           K+ A   +R EKR A HN +E+R R  IN+ I++L  ++       T++  +K  +L KA
Sbjct: 313 KAPASAQSRGEKRTA-HNAIEKRYRSSINDKIIELKDLV-----VGTEAKLNKSAVLRKA 366

Query: 248 CDYIQELRQSNHRLSEE 264
            DYI+ L+ SN +L +E
Sbjct: 367 IDYIRFLQHSNQKLKQE 383


>gi|114431248 hypothetical protein LOC205717 [Homo sapiens]
          Length = 2245

 Score = 50.8 bits (120), Expect = 1e-06
 Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 8/108 (7%)

Query: 184 PYSPKSEAPRTTRDEKR-RAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGG 242
           P   ++E P   +  K+ R  HN VER R+ KIN  I ++ ++IP C   S    QSK  
Sbjct: 2   PEMTENETPTKKQHRKKNRETHNAVERHRKKKINAGINRIGELIP-C---SPALKQSKNM 57

Query: 243 ILSKACDYIQELRQSNHRLSEELQGLDQLQLDN-DVLRQQVEDLKNKN 289
           IL +A  YI EL++ N  L   L G +  Q +    LR+Q+E+++ +N
Sbjct: 58  ILDQAFKYITELKRQNDELL--LNGGNNEQAEEIKKLRKQLEEIQKEN 103


>gi|38201614 transcription factor-like protein 4 isoform alpha [Homo
           sapiens]
          Length = 214

 Score = 50.8 bits (120), Expect = 1e-06
 Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 3/98 (3%)

Query: 174 SQRSIAPRTHPYSPKSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMES 233
           S  S+ P         EA + +  ++RR  H + E++RRD I      L  I+P C  + 
Sbjct: 20  SDNSLDPDDEDSDYHQEAYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQD 79

Query: 234 TKSGQ---SKGGILSKACDYIQELRQSNHRLSEELQGL 268
              G    SK  +L K  DYIQ L +   +  EE+  L
Sbjct: 80  FSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEEEVSTL 117


>gi|38201612 transcription factor-like protein 4 isoform beta [Homo
           sapiens]
          Length = 244

 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 5/102 (4%)

Query: 172 GGSQRSIAPRTHPYSPK--SEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDC 229
           G +  S  P T         EA + +  ++RR  H + E++RRD I      L  I+P C
Sbjct: 46  GSTSASSVPNTDDEDSDYHQEAYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTC 105

Query: 230 SMESTKSGQ---SKGGILSKACDYIQELRQSNHRLSEELQGL 268
             +    G    SK  +L K  DYIQ L +   +  EE+  L
Sbjct: 106 QQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEEEVSTL 147


>gi|24586667 transcription factor-like protein 4 isoform gamma [Homo
           sapiens]
          Length = 298

 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 5/102 (4%)

Query: 172 GGSQRSIAPRTHPYSPK--SEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDC 229
           G +  S  P T         EA + +  ++RR  H + E++RRD I      L  I+P C
Sbjct: 100 GSTSASSVPNTDDEDSDYHQEAYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTC 159

Query: 230 SMESTKSGQ---SKGGILSKACDYIQELRQSNHRLSEELQGL 268
             +    G    SK  +L K  DYIQ L +   +  EE+  L
Sbjct: 160 QQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEEEVSTL 201


>gi|24307933 transcription factor EB [Homo sapiens]
          Length = 476

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 9/122 (7%)

Query: 189 SEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKAC 248
           +E+    ++ +++  HN +ERRRR  IN+ I +L  +IP  +    +   +KG IL  + 
Sbjct: 225 AESRALAKERQKKDNHNLIERRRRFNINDRIKELGMLIPKANDLDVR--WNKGTILKASV 282

Query: 249 DYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLRAQLRHHGLEVVIKND 308
           DYI+ +++   +  E      +L++ N  L  ++++L+        Q R HGL     + 
Sbjct: 283 DYIRRMQKDLQKSRELENHSRRLEMTNKQLWLRIQELE-------MQARVHGLPTTSPSG 335

Query: 309 SN 310
            N
Sbjct: 336 MN 337


>gi|30795240 aryl hydrocarbon receptor nuclear translocator isoform
           2 [Homo sapiens]
          Length = 328

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 4/70 (5%)

Query: 188 KSEAPRTTRDEKR--RAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILS 245
           +S+  +++ D++R  R  H+E+ERRRR+K+  +I +LS ++P CS  + K    K  IL 
Sbjct: 76  RSDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCSALARK--PDKLTILR 133

Query: 246 KACDYIQELR 255
            A  +++ LR
Sbjct: 134 MAVSHMKSLR 143


>gi|4502231 aryl hydrocarbon receptor nuclear translocator isoform 1
           [Homo sapiens]
          Length = 789

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 4/70 (5%)

Query: 188 KSEAPRTTRDEKR--RAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILS 245
           +S+  +++ D++R  R  H+E+ERRRR+K+  +I +LS ++P CS  + K    K  IL 
Sbjct: 76  RSDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCSALARK--PDKLTILR 133

Query: 246 KACDYIQELR 255
            A  +++ LR
Sbjct: 134 MAVSHMKSLR 143


>gi|64762402 transcription factor EC isoform b [Homo sapiens]
          Length = 318

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 9/106 (8%)

Query: 196 RDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELR 255
           ++ +++  HN +ERRRR  IN  I +L  +IP  +    +   +KG IL  + +YI+ L+
Sbjct: 107 KERQKKDNHNLIERRRRYNINYRIKELGTLIPKSNDPDMR--WNKGTILKASVEYIKWLQ 164

Query: 256 QSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLRAQLRHHGL 301
           +   R  E      +L+  N  L  ++++L+        Q R HGL
Sbjct: 165 KEQQRARELEHRQKKLEQANRRLLLRIQELE-------IQARTHGL 203


>gi|6912702 transcription factor EC isoform a [Homo sapiens]
          Length = 347

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 9/106 (8%)

Query: 196 RDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELR 255
           ++ +++  HN +ERRRR  IN  I +L  +IP  +    +   +KG IL  + +YI+ L+
Sbjct: 136 KERQKKDNHNLIERRRRYNINYRIKELGTLIPKSNDPDMR--WNKGTILKASVEYIKWLQ 193

Query: 256 QSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLRAQLRHHGL 301
           +   R  E      +L+  N  L  ++++L+        Q R HGL
Sbjct: 194 KEQQRARELEHRQKKLEQANRRLLLRIQELE-------IQARTHGL 232


>gi|71852582 aryl hydrocarbon receptor nuclear translocator-like
           isoform b [Homo sapiens]
          Length = 582

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 22/68 (32%), Positives = 42/68 (61%), Gaps = 2/68 (2%)

Query: 196 RDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELR 255
           R +  R  H+++E+RRRDK+N++I +L+ ++P C+  S K    K  +L  A  +++ LR
Sbjct: 26  RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK--LDKLTVLRMAVQHMKTLR 83

Query: 256 QSNHRLSE 263
            + +  +E
Sbjct: 84  GATNPYTE 91


>gi|71852580 aryl hydrocarbon receptor nuclear translocator-like
           isoform a [Homo sapiens]
          Length = 625

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 22/68 (32%), Positives = 42/68 (61%), Gaps = 2/68 (2%)

Query: 196 RDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELR 255
           R +  R  H+++E+RRRDK+N++I +L+ ++P C+  S K    K  +L  A  +++ LR
Sbjct: 69  RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK--LDKLTVLRMAVQHMKTLR 126

Query: 256 QSNHRLSE 263
            + +  +E
Sbjct: 127 GATNPYTE 134


>gi|42716311 aryl hydrocarbon receptor nuclear translocator-like
           isoform a [Homo sapiens]
          Length = 625

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 22/68 (32%), Positives = 42/68 (61%), Gaps = 2/68 (2%)

Query: 196 RDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELR 255
           R +  R  H+++E+RRRDK+N++I +L+ ++P C+  S K    K  +L  A  +++ LR
Sbjct: 69  RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK--LDKLTVLRMAVQHMKTLR 126

Query: 256 QSNHRLSE 263
            + +  +E
Sbjct: 127 GATNPYTE 134


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.310    0.126    0.350 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,649,158
Number of Sequences: 37866
Number of extensions: 531979
Number of successful extensions: 2628
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 2151
Number of HSP's gapped (non-prelim): 474
length of query: 310
length of database: 18,247,518
effective HSP length: 102
effective length of query: 208
effective length of database: 14,385,186
effective search space: 2992118688
effective search space used: 2992118688
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.