Guide to the Human Genome
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Name: DCTN3 Sequence: fasta or formatted (186aa) NCBI GI: 6005745
Description:

dynactin 3 isoform 1

Referenced in:

Dynein and Dynactin

Other entries for this name:
alt prot [176aa] dynactin 3 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.2         19           2
 C cysteine            1.1          2           1
 D aspartate           4.8          9           1
 E glutamate          10.2         19           2
 F phenylalanine       1.6          3           1
 G glycine             3.8          7           2
 H histidine           1.6          3           1
 I isoleucine          7.0         13           1
 K lysine              7.0         13           2
 L leucine            13.4         25           2
 M methionine          1.6          3           1
 N asparagine          1.6          3           1
 P proline             3.2          6           1
 Q glutamine           9.1         17           3
 R arginine            5.4         10           1
 S serine              4.3          8           2
 T threonine           2.7          5           2
 V valine              7.5         14           1
 W tryptophan          1.1          2           1
 Y tyrosine            2.7          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dynactin 3 isoform 1 
DCTN3                 0.719   dynactin 3 isoform 2 
MYH11                 0.024   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.024   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.024   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.024   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
BHLHE22               0.024   basic helix-loop-helix domain containing, class B, 5...
DMD                   0.024   dystrophin Dp427c isoform 
DMD                   0.024   dystrophin Dp427p2 isoform 
DMD                   0.024   dystrophin Dp427p1 isoform 
DMD                   0.024   dystrophin Dp427l isoform 
DMD                   0.024   dystrophin Dp427m isoform 
DLG5                  0.021   discs large homolog 5 
BHLHE23               0.018   basic helix-loop-helix domain containing, class B, 4...
KRT3                  0.018   keratin 3 
MICAL3                0.018   microtubule associated monoxygenase, calponin and L...
TTC21B                0.015   tetratricopeptide repeat domain 21B 
MYH9                  0.015   myosin, heavy polypeptide 9, non-muscle 
SFRS17A               0.015   DNA segment on chromosome X and Y (unique) 155 expre...
EIF4G2                0.015   eukaryotic translation initiation factor 4 gamma, 2...
EIF4G2                0.015   eukaryotic translation initiation factor 4 gamma, 2 i...
TGFBI                 0.012   transforming growth factor, beta-induced, 68kDa precu...
AKAP9                 0.012   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.012   A-kinase anchor protein 9 isoform 3 
EEA1                  0.012   early endosome antigen 1, 162kD 
CCDC29                0.012   coiled-coil domain containing 29 
RAB11FIP4             0.012   RAB11 family interacting protein 4 (class II) 
ZNFX1                 0.012   zinc finger, NFX1-type containing 1 
DNM1L                 0.012   dynamin 1-like isoform 1 
DNM1L                 0.012   dynamin 1-like isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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