Guide to the Human Genome
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Name: DNM1L Sequence: fasta or formatted (736aa) NCBI GI: 171460914
Description:

dynamin 1-like isoform 1

Referenced in:

Partitioning and Organelles
Additional Membrane Functions

Other entries for this name:
alt prot [710aa] dynamin 1-like isoform 2
alt prot [699aa] dynamin 1-like isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         51           2
 C cysteine            1.2          9           1
 D aspartate           5.3         39           2
 E glutamate           7.9         58           2
 F phenylalanine       2.0         15           1
 G glycine             5.4         40           4
 H histidine           2.0         15           2
 I isoleucine          7.1         52           2
 K lysine              6.1         45           2
 L leucine            11.4         84           2
 M methionine          2.0         15           1
 N asparagine          4.9         36           3
 P proline             5.0         37           1
 Q glutamine           4.1         30           1
 R arginine            6.4         47           2
 S serine              6.4         47           2
 T threonine           5.8         43           2
 V valine              7.7         57           3
 W tryptophan          0.4          3           1
 Y tyrosine            1.8         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dynamin 1-like isoform 1 
DNM1L                 0.956   dynamin 1-like isoform 2 
DNM1L                 0.938   dynamin 1-like isoform 3 
DNM2                  0.336   dynamin 2 isoform 4 
DNM2                  0.335   dynamin 2 isoform 2 
DNM2                  0.334   dynamin 2 isoform 3 
DNM2                  0.332   dynamin 2 isoform 1 
DNM1                  0.308   dynamin 1 isoform 2 
DNM1                  0.308   dynamin 1 isoform 1 
DNM3                  0.292   dynamin 3 isoform a 
DNM3                  0.292   dynamin 3 isoform b 
MX2                   0.121   myxovirus resistance protein 2 
MX1                   0.120   myxovirus resistance protein 1 
MX1                   0.120   myxovirus resistance protein 1 
OPA1                  0.056   optic atrophy 1 isoform 8 
OPA1                  0.056   optic atrophy 1 isoform 7 
OPA1                  0.056   optic atrophy 1 isoform 6 
OPA1                  0.056   optic atrophy 1 isoform 5 
OPA1                  0.056   optic atrophy 1 isoform 4 
OPA1                  0.056   optic atrophy 1 isoform 3 
OPA1                  0.056   optic atrophy 1 isoform 2 
OPA1                  0.056   optic atrophy 1 isoform 1 
LOC730058             0.017   PREDICTED: UPF0621 protein C-like 
LOC730058             0.017   PREDICTED: UPF0621 protein C-like 
LOC730058             0.017   PREDICTED: UPF0621 protein C-like 
HOXB1                 0.011   homeobox B1 
KIF26B                0.007   kinesin family member 26B 
DNMT1                 0.006   DNA (cytosine-5-)-methyltransferase 1 isoform b [Homo...
NAV1                  0.006   neuron navigator 1 
SPATS2                0.006   spermatogenesis associated, serine-rich 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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