TDG 33798

Name: TDG	Sequence: fasta or formatted (410aa)		NCBI GI: 59853162
Description: thymine-DNA glycosylase		Referenced in: DNases, Recombination, and DNA Repair
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 27 2 C cysteine 1.7 7 1 D aspartate 3.9 16 2 E glutamate 9.3 38 3 F phenylalanine 4.9 20 1 G glycine 7.3 30 2 H histidine 2.2 9 2 I isoleucine 4.1 17 2 K lysine 9.0 37 2 L leucine 6.1 25 2 M methionine 2.9 12 1 N asparagine 3.9 16 1 P proline 7.1 29 1 Q glutamine 6.8 28 2 R arginine 3.4 14 1 S serine 6.6 27 3 T threonine 4.4 18 2 V valine 5.6 23 2 W tryptophan 0.5 2 1 Y tyrosine 3.7 15 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 thymine-DNA glycosylase SETBP1 0.018 SET binding protein 1 isoform a CHD6 0.018 chromodomain helicase DNA binding protein 6 AAK1 0.018 AP2 associated kinase 1 NEFH 0.017 neurofilament, heavy polypeptide 200kDa GNAL 0.016 guanine nucleotide binding protein (G protein), alph... TTN 0.016 titin isoform N2-A HMGA1 0.016 high mobility group AT-hook 1 isoform a HMGA1 0.016 high mobility group AT-hook 1 isoform a ZFHX3 0.015 AT-binding transcription factor 1 BRD4 0.014 bromodomain-containing protein 4 isoform short BRD4 0.014 bromodomain-containing protein 4 isoform long CD3EAP 0.014 CD3E antigen, epsilon polypeptide associated protein ... EPB41L2 0.012 erythrocyte membrane protein band 4.1-like 2 isofor... EPB41L2 0.012 erythrocyte membrane protein band 4.1-like 2 isofor... EPB41L2 0.012 erythrocyte membrane protein band 4.1-like 2 isoform ... FNBP4 0.012 formin binding protein 4 TNRC6A 0.012 trinucleotide repeat containing 6A NEFM 0.012 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.012 neurofilament, medium polypeptide 150kDa isoform 2 ... GNAS 0.011 GNAS complex locus NESP55 LOC389217 0.011 PREDICTED: similar to SET translocation CCDC7 0.011 coiled-coil domain containing 7 CCDC7 0.011 coiled-coil domain containing 7 JUN 0.010 jun oncogene MEN1 0.010 menin isoform 1 MEN1 0.010 menin isoform 1 MEN1 0.010 menin isoform 1 MEN1 0.010 menin isoform 1 MEN1 0.010 menin isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.