Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 5902724
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5902724 neuro-oncological ventral antigen 2 [Homo sapiens]
(492 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5902724 neuro-oncological ventral antigen 2 [Homo sapiens] 949 0.0
gi|56549651 neuro-oncological ventral antigen 1 isoform 2 [Homo ... 682 0.0
gi|56549653 neuro-oncological ventral antigen 1 isoform 1 [Homo ... 669 0.0
gi|6031189 neuro-oncological ventral antigen 1 isoform 3 [Homo s... 221 1e-57
gi|194306631 poly(rC) binding protein 3 isoform 1 [Homo sapiens] 94 4e-19
gi|14670373 poly(rC) binding protein 4 isoform c [Homo sapiens] 80 3e-15
gi|14670369 poly(rC) binding protein 4 isoform c [Homo sapiens] 80 3e-15
gi|194306633 poly(rC) binding protein 3 isoform 2 [Homo sapiens] 79 9e-15
gi|14141166 poly(rC) binding protein 2 isoform b [Homo sapiens] 78 2e-14
gi|56118219 insulin-like growth factor 2 mRNA binding protein 2 ... 77 3e-14
gi|193083114 poly(rC) binding protein 2 isoform g [Homo sapiens] 77 4e-14
gi|193083110 poly(rC) binding protein 2 isoform e [Homo sapiens] 77 4e-14
gi|148833484 poly(rC) binding protein 2 isoform c [Homo sapiens] 77 4e-14
gi|222352151 poly(rC) binding protein 1 [Homo sapiens] 75 1e-13
gi|193083112 poly(rC) binding protein 2 isoform f [Homo sapiens] 75 2e-13
gi|193083108 poly(rC) binding protein 2 isoform d [Homo sapiens] 75 2e-13
gi|14141168 poly(rC) binding protein 2 isoform a [Homo sapiens] 75 2e-13
gi|17402900 far upstream element-binding protein [Homo sapiens] 74 2e-13
gi|122937319 even-skipped homeobox 2 [Homo sapiens] 71 2e-12
gi|145312259 tudor and KH domain containing isoform a [Homo sapi... 71 2e-12
gi|145312270 tudor and KH domain containing isoform a [Homo sapi... 71 2e-12
gi|145312256 tudor and KH domain containing isoform a [Homo sapi... 71 2e-12
gi|14165439 heterogeneous nuclear ribonucleoprotein K isoform a ... 70 3e-12
gi|14165435 heterogeneous nuclear ribonucleoprotein K isoform b ... 70 3e-12
gi|14165437 heterogeneous nuclear ribonucleoprotein K isoform a ... 70 3e-12
gi|100816392 far upstream element (FUSE) binding protein 3 [Homo... 69 7e-12
gi|64085377 insulin-like growth factor 2 mRNA binding protein 2 ... 69 1e-11
gi|154355000 KH-type splicing regulatory protein [Homo sapiens] 66 6e-11
gi|30795212 insulin-like growth factor 2 mRNA binding protein 3 ... 62 2e-09
gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 61 2e-09
>gi|5902724 neuro-oncological ventral antigen 2 [Homo sapiens]
Length = 492
Score = 949 bits (2454), Expect = 0.0
Identities = 492/492 (100%), Positives = 492/492 (100%)
Query: 1 MEPEAPDSRKRPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQK 60
MEPEAPDSRKRPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQK
Sbjct: 1 MEPEAPDSRKRPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQK 60
Query: 61 ETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQ 120
ETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQ
Sbjct: 61 ETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQ 120
Query: 121 PQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVV 180
PQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVV
Sbjct: 121 PQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVV 180
Query: 181 TVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPA 240
TVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPA
Sbjct: 181 TVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPA 240
Query: 241 AAAASAAAASGLLGPAGLAGVGAFPAALPAFSGTDLLAISTALNTLASYGYNTNSLGLGL 300
AAAASAAAASGLLGPAGLAGVGAFPAALPAFSGTDLLAISTALNTLASYGYNTNSLGLGL
Sbjct: 241 AAAASAAAASGLLGPAGLAGVGAFPAALPAFSGTDLLAISTALNTLASYGYNTNSLGLGL 300
Query: 301 NSAAASGVLAAVAAGANPAAAAAANLLASYAGEAGAGPAGGAAPPPPPPPGALGSFALAA 360
NSAAASGVLAAVAAGANPAAAAAANLLASYAGEAGAGPAGGAAPPPPPPPGALGSFALAA
Sbjct: 301 NSAAASGVLAAVAAGANPAAAAAANLLASYAGEAGAGPAGGAAPPPPPPPGALGSFALAA 360
Query: 361 AANGYLGAGAGGGAGGGGGPLVAAAAAAGAAGGFLTAEKLAAESAKELVEIAVPENLVGA 420
AANGYLGAGAGGGAGGGGGPLVAAAAAAGAAGGFLTAEKLAAESAKELVEIAVPENLVGA
Sbjct: 361 AANGYLGAGAGGGAGGGGGPLVAAAAAAGAAGGFLTAEKLAAESAKELVEIAVPENLVGA 420
Query: 421 ILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRVTYE 480
ILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRVTYE
Sbjct: 421 ILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRVTYE 480
Query: 481 QGVRASNPQKVG 492
QGVRASNPQKVG
Sbjct: 481 QGVRASNPQKVG 492
>gi|56549651 neuro-oncological ventral antigen 1 isoform 2 [Homo
sapiens]
Length = 483
Score = 682 bits (1761), Expect = 0.0
Identities = 370/492 (75%), Positives = 409/492 (83%), Gaps = 32/492 (6%)
Query: 4 EAPDSRKRPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETG 63
+ PDSRKRPLE PPE TKR+NTGE+G+YFLKVLIPSYAAGSIIGKGGQTIVQLQKETG
Sbjct: 21 DPPDSRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETG 80
Query: 64 ATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQT 123
ATIKLSKSKDFYPGTTERVCL+QGT EALNAVH FIAEK+RE+PQ + K E V+ILQPQT
Sbjct: 81 ATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQT 140
Query: 124 TMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVS 183
T+NPDR KQ K+IVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKP+GINLQERVVTVS
Sbjct: 141 TVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVS 200
Query: 184 GEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAA 243
GEPEQ KAV I+QK+QEDPQS SCLNISYANV GPVANSNPTGSPYA+ A+VLP
Sbjct: 201 GEPEQNRKAVELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPYANTAEVLP---- 256
Query: 244 ASAAAASGLLGPAGLAGVGAFPAALPAFSGTDLLAISTALNTLASYGYNTNSLGLGLNSA 303
+AAAA+GLLG A LAGV AFPA L F+G DL+AI++ALNTLASYGYN N+LGLGL+ A
Sbjct: 257 -TAAAAAGLLGHANLAGVAAFPAVLSGFTGNDLVAITSALNTLASYGYNLNTLGLGLSQA 315
Query: 304 AASGVLAAVAAGANPAAAAAANLLASYAGEAGA--GPAGGAAPPPPPPPGALGSFALA-A 360
AA+G LAA AA ANP AAAAANLLA+YA EA A AGG A ALGS A A A
Sbjct: 316 AATGALAAAAASANP-AAAAANLLATYASEASASGSTAGGTA-----GTFALGSLAAATA 369
Query: 361 AANGYLGAGAGGGAGGGGGPLVAAAAAAGAAGGFLTAEKLAAESAKELVEIAVPENLVGA 420
A NGY GA + PL A+A L EK + + +K++VEIAVPENLVGA
Sbjct: 370 ATNGYFGAAS---------PLAASA--------ILGTEK-STDGSKDVVEIAVPENLVGA 411
Query: 421 ILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRVTYE 480
ILGKGGKTLVEYQELTGARIQISKKGEF+PGTRNR+VTITG+PAATQAAQYLI+QR+TYE
Sbjct: 412 ILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAAQYLITQRITYE 471
Query: 481 QGVRASNPQKVG 492
QGVRA+NPQKVG
Sbjct: 472 QGVRAANPQKVG 483
>gi|56549653 neuro-oncological ventral antigen 1 isoform 1 [Homo
sapiens]
Length = 507
Score = 669 bits (1726), Expect = 0.0
Identities = 370/516 (71%), Positives = 409/516 (79%), Gaps = 56/516 (10%)
Query: 4 EAPDSRKRPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETG 63
+ PDSRKRPLE PPE TKR+NTGE+G+YFLKVLIPSYAAGSIIGKGGQTIVQLQKETG
Sbjct: 21 DPPDSRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETG 80
Query: 64 ATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQT 123
ATIKLSKSKDFYPGTTERVCL+QGT EALNAVH FIAEK+RE+PQ + K E V+ILQPQT
Sbjct: 81 ATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQT 140
Query: 124 TMNPD------------------------RAKQAKLIVPNSTAGLIIGKGGATVKAVMEQ 159
T+NPD RA Q K+IVPNSTAGLIIGKGGATVKAVMEQ
Sbjct: 141 TVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQ 200
Query: 160 SGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAG 219
SGAWVQLSQKP+GINLQERVVTVSGEPEQ KAV I+QK+QEDPQS SCLNISYANV G
Sbjct: 201 SGAWVQLSQKPDGINLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNISYANVTG 260
Query: 220 PVANSNPTGSPYASPADVLPAAAAASAAAASGLLGPAGLAGVGAFPAALPAFSGTDLLAI 279
PVANSNPTGSPYA+ A+VLP +AAAA+GLLG A LAGV AFPA L F+G DL+AI
Sbjct: 261 PVANSNPTGSPYANTAEVLP-----TAAAAAGLLGHANLAGVAAFPAVLSGFTGNDLVAI 315
Query: 280 STALNTLASYGYNTNSLGLGLNSAAASGVLAAVAAGANPAAAAAANLLASYAGEAGA--G 337
++ALNTLASYGYN N+LGLGL+ AAA+G LAA AA ANP AAAAANLLA+YA EA A
Sbjct: 316 TSALNTLASYGYNLNTLGLGLSQAAATGALAAAAASANP-AAAAANLLATYASEASASGS 374
Query: 338 PAGGAAPPPPPPPGALGSFALA-AAANGYLGAGAGGGAGGGGGPLVAAAAAAGAAGGFLT 396
AGG A ALGS A A AA NGY GA + PL A+A L
Sbjct: 375 TAGGTA-----GTFALGSLAAATAATNGYFGAAS---------PLAASA--------ILG 412
Query: 397 AEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRR 456
EK + + +K++VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEF+PGTRNR+
Sbjct: 413 TEK-STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRK 471
Query: 457 VTITGSPAATQAAQYLISQRVTYEQGVRASNPQKVG 492
VTITG+PAATQAAQYLI+QR+TYEQGVRA+NPQKVG
Sbjct: 472 VTITGTPAATQAAQYLITQRITYEQGVRAANPQKVG 507
>gi|6031189 neuro-oncological ventral antigen 1 isoform 3 [Homo
sapiens]
Length = 181
Score = 221 bits (563), Expect = 1e-57
Identities = 109/138 (78%), Positives = 120/138 (86%)
Query: 4 EAPDSRKRPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETG 63
+ PDSRKRPLE PPE TKR+NTGE+G+YFLKVLIPSYAAGSIIGKGGQTIVQLQKETG
Sbjct: 21 DPPDSRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETG 80
Query: 64 ATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQT 123
ATIKLSKSKDFYPGTTERVCL+QGT EALNAVH FIAEK+RE+PQ + K E V+ILQPQT
Sbjct: 81 ATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQT 140
Query: 124 TMNPDRAKQAKLIVPNST 141
T+NPDR KQ P +T
Sbjct: 141 TVNPDRIKQTLPSSPTTT 158
Score = 59.7 bits (143), Expect = 6e-09
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 403 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 462
E + +++ +P G+I+GKGG+T+V+ Q+ TGA I++SK +F PGT R I G+
Sbjct: 46 EDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGT 105
Query: 463 PAATQAAQYLISQRV-TYEQGVRASNPQKV 491
A A I++++ Q V + P +
Sbjct: 106 VEALNAVHGFIAEKIREMPQNVAKTEPVSI 135
Score = 50.1 bits (118), Expect = 5e-06
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 122 QTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGI-NLQERVV 180
+T D K+++P+ AG IIGKGG T+ + +++GA ++LS+ + ERV
Sbjct: 41 RTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 100
Query: 181 TVSGEPEQVHKAVSAIVQKVQEDPQS 206
+ G E ++ I +K++E PQ+
Sbjct: 101 LIQGTVEALNAVHGFIAEKIREMPQN 126
>gi|194306631 poly(rC) binding protein 3 isoform 1 [Homo sapiens]
Length = 371
Score = 93.6 bits (231), Expect = 4e-19
Identities = 95/348 (27%), Positives = 150/348 (43%), Gaps = 33/348 (9%)
Query: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 193
+L++ G IIGK G TVK + E+SGA + +S+ N ER+VT++G + + KA
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPERIVTITGPTDAIFKAF 104
Query: 194 SAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASGLL 253
+ I K +ED + ++NS T P + V+PA+ S G
Sbjct: 105 AMIAYKFEED-------------IINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG-- 149
Query: 254 GPAGLAGVGAFPAALPAFSGTDLLAISTALNTLASYGYNTNSLGLGLNSAAASGVLAAVA 313
+ + + A +G D+L ST S T + +L +
Sbjct: 150 --SKIKEIRESTGAQVQVAG-DMLPNSTERAVTIS---GTPDAIIQCVKQICVVMLESPP 203
Query: 314 AGAN-PAAAAAANLLASYAGEAGAGPAGGAAPPPPPPPGALGSFALAAAANGYLGAGAGG 372
GA P A+ +AG G A P P L A+ LG
Sbjct: 204 KGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQ-TNP 262
Query: 373 GAGGGGGPLVAAAAAAGAAGGFLTAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEY 432
G PL ++ A G + L A E+ +P +L+G I+G+ G + E
Sbjct: 263 AFPGEKLPLHSSEEAQNLMG---QSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEI 319
Query: 433 QELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRVTYE 480
++++GA+I+I+ E G+ R++TITG+PA AQYLI+ R+T E
Sbjct: 320 RQMSGAQIKIANATE---GSSERQITITGTPANISLAQYLINARLTSE 364
Score = 81.6 bits (200), Expect = 1e-15
Identities = 58/193 (30%), Positives = 98/193 (50%), Gaps = 23/193 (11%)
Query: 22 TKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTER 81
+K S G +++L+ GSIIGK G+T+ ++++E+GA I +S+ ER
Sbjct: 35 SKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPER 89
Query: 82 VCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQ--PQTTMNPDRAKQAKLIVPN 139
+ + G +A+ + IA K E +++N + P T+ P +L+VP
Sbjct: 90 IVTITGPTDAIFKAFAMIAYKFEE--------DIINSMSNSPATSKPP---VTLRLVVPA 138
Query: 140 STAGLIIGKGGATVKAVMEQSGAWVQLS--QKPEGINLQERVVTVSGEPEQVHKAVSAIV 197
S G +IGKGG+ +K + E +GA VQ++ P N ER VT+SG P+ + + V I
Sbjct: 139 SQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQIC 195
Query: 198 QKVQEDPQSSSCL 210
+ E P + +
Sbjct: 196 VVMLESPPKGATI 208
Score = 52.4 bits (124), Expect = 9e-07
Identities = 48/226 (21%), Positives = 90/226 (39%), Gaps = 72/226 (31%)
Query: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTE-------------- 80
L++++P+ GS+IGKGG I ++++ TGA ++++ D P +TE
Sbjct: 132 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAG--DMLPNSTERAVTISGTPDAIIQ 189
Query: 81 ---RVCLVQ-------------------------GTA------------EALNAVHSFIA 100
++C+V G A + L +H
Sbjct: 190 CVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAM 249
Query: 101 EKVREIPQAMTKP-------------EVVNILQPQTTMNPDR-AKQAKLIVPNSTAGLII 146
++ P T P E N++ + ++ A +L +PN G II
Sbjct: 250 QQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCII 309
Query: 147 GKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKA 192
G+ G + + + SGA ++++ EG + ER +T++G P + A
Sbjct: 310 GRQGTKINEIRQMSGAQIKIANATEGSS--ERQITITGTPANISLA 353
>gi|14670373 poly(rC) binding protein 4 isoform c [Homo sapiens]
Length = 403
Score = 80.5 bits (197), Expect = 3e-15
Identities = 91/347 (26%), Positives = 140/347 (40%), Gaps = 67/347 (19%)
Query: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 193
++++ G IIGK G TVK + EQS A + +S+ + ER+ T++G V AV
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPERITTITGSTAAVFHAV 76
Query: 194 SAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASGLL 253
S I K+ ED + AN P + V+PA+ S L+
Sbjct: 77 SMIAFKLDED-------------LCAAPANGGNVSRPPVTLRLVIPASQCGS------LI 117
Query: 254 GPAG--LAGVGAFPAALPAFSGTDLLAISTALNTLASYGYNTNSLGLGLNSAAASGVLAA 311
G AG + + A +G DLL ST S + L + A +L +
Sbjct: 118 GKAGTKIKEIRETTGAQVQVAG-DLLPNSTERAVTVSGVPDAIILCVRQICAV---ILES 173
Query: 312 VAAGA----NPAAAAAANLLASYAGEAGAGPAGGAAPPPPPPPGALGSFALAAAANGYLG 367
GA +P+ + LL++ G + G G P L S A+
Sbjct: 174 PPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAV--------- 224
Query: 368 AGAGGGAGGGGGPLVAAAAAAGAAGGFLTAEKLAAESAKELVEIAVPENLVGAILGKGGK 427
P + G G T+ + E VP +L+G ++G+ G
Sbjct: 225 ------------PFATPSVVPGLDPGTQTSSQ----------EFLVPNDLIGCVIGRQGS 262
Query: 428 TLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLIS 474
+ E ++++GA I+I + E G R VTITGSP + AQYLI+
Sbjct: 263 KISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLIT 306
Score = 77.8 bits (190), Expect = 2e-14
Identities = 100/405 (24%), Positives = 159/405 (39%), Gaps = 67/405 (16%)
Query: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
L++L+ GSIIGK G+T+ ++++++ A I +S+ ER+ + G+ A+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 95 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVK 154
S IA K+ E N+ +P T+ +L++P S G +IGK G +K
Sbjct: 75 AVSMIAFKLDE-DLCAAPANGGNVSRPPVTL--------RLVIPASQCGSLIGKAGTKIK 125
Query: 155 AVMEQSGAWVQLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCL-- 210
+ E +GA VQ++ P N ER VTVSG P+ + V I + E P + +
Sbjct: 126 EIRETTGAQVQVAGDLLP---NSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPY 182
Query: 211 ---------------NISYANVAGPVANSNPT--------GSPYASPADVLPAAAAASAA 247
S G V + T P+A+P+ V+P +
Sbjct: 183 HPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPS-VVPGLDPGTQT 241
Query: 248 AASGLLGPAGLAGVGAFPAALPAFSGTDLLAISTALNTLASYGYNTNSLGLGLNSAAASG 307
++ L P L G + G+ + I G + G G +G
Sbjct: 242 SSQEFLVPNDLIG------CVIGRQGSKISEIRQMSGAHIKIG--NQAEGAGERHVTITG 293
Query: 308 VLAAVAAGANPAAAAAANLLASYAGEAGAGPAGGAAPPPPP-------PPGALGSFALAA 360
++A A ++ G + PA AP PP PPG LG+ A
Sbjct: 294 SPVSIALAQYLITACLETAKSTSGGTPSSAPADLPAPFSPPLTALPTAPPGLLGT-PYAI 352
Query: 361 AANGYLGAG-----AGGGAGGGGGP-LVAAAAAAGAAGGFLTAEK 399
+ + ++G A A G P L A A AA G AE+
Sbjct: 353 SLSNFIGLKPMPFLALPPASPGPPPGLAAYTAKMAAANGSKKAER 397
>gi|14670369 poly(rC) binding protein 4 isoform c [Homo sapiens]
Length = 403
Score = 80.5 bits (197), Expect = 3e-15
Identities = 91/347 (26%), Positives = 140/347 (40%), Gaps = 67/347 (19%)
Query: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 193
++++ G IIGK G TVK + EQS A + +S+ + ER+ T++G V AV
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPERITTITGSTAAVFHAV 76
Query: 194 SAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASGLL 253
S I K+ ED + AN P + V+PA+ S L+
Sbjct: 77 SMIAFKLDED-------------LCAAPANGGNVSRPPVTLRLVIPASQCGS------LI 117
Query: 254 GPAG--LAGVGAFPAALPAFSGTDLLAISTALNTLASYGYNTNSLGLGLNSAAASGVLAA 311
G AG + + A +G DLL ST S + L + A +L +
Sbjct: 118 GKAGTKIKEIRETTGAQVQVAG-DLLPNSTERAVTVSGVPDAIILCVRQICAV---ILES 173
Query: 312 VAAGA----NPAAAAAANLLASYAGEAGAGPAGGAAPPPPPPPGALGSFALAAAANGYLG 367
GA +P+ + LL++ G + G G P L S A+
Sbjct: 174 PPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAV--------- 224
Query: 368 AGAGGGAGGGGGPLVAAAAAAGAAGGFLTAEKLAAESAKELVEIAVPENLVGAILGKGGK 427
P + G G T+ + E VP +L+G ++G+ G
Sbjct: 225 ------------PFATPSVVPGLDPGTQTSSQ----------EFLVPNDLIGCVIGRQGS 262
Query: 428 TLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLIS 474
+ E ++++GA I+I + E G R VTITGSP + AQYLI+
Sbjct: 263 KISEIRQMSGAHIKIGNQAE---GAGERHVTITGSPVSIALAQYLIT 306
Score = 77.8 bits (190), Expect = 2e-14
Identities = 100/405 (24%), Positives = 159/405 (39%), Gaps = 67/405 (16%)
Query: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
L++L+ GSIIGK G+T+ ++++++ A I +S+ ER+ + G+ A+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 95 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVK 154
S IA K+ E N+ +P T+ +L++P S G +IGK G +K
Sbjct: 75 AVSMIAFKLDE-DLCAAPANGGNVSRPPVTL--------RLVIPASQCGSLIGKAGTKIK 125
Query: 155 AVMEQSGAWVQLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCL-- 210
+ E +GA VQ++ P N ER VTVSG P+ + V I + E P + +
Sbjct: 126 EIRETTGAQVQVAGDLLP---NSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPY 182
Query: 211 ---------------NISYANVAGPVANSNPT--------GSPYASPADVLPAAAAASAA 247
S G V + T P+A+P+ V+P +
Sbjct: 183 HPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPS-VVPGLDPGTQT 241
Query: 248 AASGLLGPAGLAGVGAFPAALPAFSGTDLLAISTALNTLASYGYNTNSLGLGLNSAAASG 307
++ L P L G + G+ + I G + G G +G
Sbjct: 242 SSQEFLVPNDLIG------CVIGRQGSKISEIRQMSGAHIKIG--NQAEGAGERHVTITG 293
Query: 308 VLAAVAAGANPAAAAAANLLASYAGEAGAGPAGGAAPPPPP-------PPGALGSFALAA 360
++A A ++ G + PA AP PP PPG LG+ A
Sbjct: 294 SPVSIALAQYLITACLETAKSTSGGTPSSAPADLPAPFSPPLTALPTAPPGLLGT-PYAI 352
Query: 361 AANGYLGAG-----AGGGAGGGGGP-LVAAAAAAGAAGGFLTAEK 399
+ + ++G A A G P L A A AA G AE+
Sbjct: 353 SLSNFIGLKPMPFLALPPASPGPPPGLAAYTAKMAAANGSKKAER 397
>gi|194306633 poly(rC) binding protein 3 isoform 2 [Homo sapiens]
Length = 345
Score = 79.0 bits (193), Expect = 9e-15
Identities = 56/179 (31%), Positives = 93/179 (51%), Gaps = 23/179 (12%)
Query: 22 TKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTER 81
+K S G +++L+ GSIIGK G+T+ ++++E+GA I +S+ ER
Sbjct: 35 SKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPER 89
Query: 82 VCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQ--PQTTMNPDRAKQAKLIVPN 139
+ + G +A+ + IA K E +++N + P T+ P +L+VP
Sbjct: 90 IVTITGPTDAIFKAFAMIAYKFEE--------DIINSMSNSPATSKPP---VTLRLVVPA 138
Query: 140 STAGLIIGKGGATVKAVMEQSGAWVQLS--QKPEGINLQERVVTVSGEPEQVHKAVSAI 196
S G +IGKGG+ +K + E +GA VQ++ P N ER VT+SG P+ + + V I
Sbjct: 139 SQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQI 194
Score = 68.6 bits (166), Expect = 1e-11
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 46/200 (23%)
Query: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA--- 91
L++++P+ GS+IGKGG I ++++ TGA ++++ D P +TER + GT +A
Sbjct: 132 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAG--DMLPNSTERAVTISGTPDAIIQ 189
Query: 92 -------------------------LNAVHSFIAEKVREIPQAMTKP------------- 113
L +H ++ P T P
Sbjct: 190 CVKQICVVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSE 249
Query: 114 EVVNILQPQTTMNPDR-AKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEG 172
E N++ + ++ A +L +PN G IIG+ G + + + SGA ++++ EG
Sbjct: 250 EAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEG 309
Query: 173 INLQERVVTVSGEPEQVHKA 192
+ ER +T++G P + A
Sbjct: 310 SS--ERQITITGTPANISLA 327
Score = 60.8 bits (146), Expect = 3e-09
Identities = 29/71 (40%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
Query: 410 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 469
E+ +P +L+G I+G+ G + E ++++GA+I+I+ E G+ R++TITG+PA A
Sbjct: 271 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 327
Query: 470 QYLISQRVTYE 480
QYLI+ R+T E
Sbjct: 328 QYLINARLTSE 338
Score = 55.8 bits (133), Expect = 9e-08
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 193
+L++ G IIGK G TVK + E+SGA + +S+ N ER+VT++G + + KA
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPERIVTITGPTDAIFKAF 104
Query: 194 SAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASG 251
+ I K +ED + ++NS T P + V+PA+ S G
Sbjct: 105 AMIAYKFEED-------------IINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Score = 50.8 bits (120), Expect = 3e-06
Identities = 23/57 (40%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAA 465
+ + VP + G+++GKGG + E +E TGA++Q++ G+ LP + R VTI+G+P A
Sbjct: 132 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVA--GDMLPNSTERAVTISGTPDA 186
Score = 33.9 bits (76), Expect = 0.35
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 418 VGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQR 476
VG+I+GK G+T+ + +E +GARI IS+ R VTITG A A +I+ +
Sbjct: 57 VGSIIGKKGETVKKMREESGARINISE-----GNCPERIVTITGPTDAIFKAFAMIAYK 110
>gi|14141166 poly(rC) binding protein 2 isoform b [Homo sapiens]
Length = 362
Score = 77.8 bits (190), Expect = 2e-14
Identities = 81/313 (25%), Positives = 133/313 (42%), Gaps = 34/313 (10%)
Query: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
+++L+ GSIIGK G+++ ++++E+GA I +S+ ER+ + G A+
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 95 VHSFIAEKVRE-IPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATV 153
+ I +K+ E I +MT + +P T+ +L+VP S G +IGKGG +
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAAS--RPPVTL--------RLVVPASQCGSLIGKGGCKI 120
Query: 154 KAVMEQSGAWVQLS--QKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 211
K + E +GA VQ++ P N ER +T++G P+ + + V I + E P +
Sbjct: 121 KEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIP 177
Query: 212 ISYANVAGPV-----ANSNPTGSPYASPADVLPAAAAASAAAASGLLGPAGLAGVGAFPA 266
+ PV + TGS AS P S L GP A
Sbjct: 178 YRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTP-----SMCLNPDLEGPPLEAYTIQGQY 232
Query: 267 ALPAFSGTDLLAISTALNTLASYGYNTNSLGLGLNSAAASGVLAAVAAGANPAA---AAA 323
A+P T L ++ + NT G+ +S G A + A A +
Sbjct: 233 AIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIP 292
Query: 324 ANLLASYAGEAGA 336
+L+ G GA
Sbjct: 293 NDLIGCIIGRQGA 305
Score = 60.8 bits (146), Expect = 3e-09
Identities = 31/78 (39%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
Query: 410 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 469
E+ +P +L+G I+G+ G + E ++++GA+I+I+ E G+ +R+VTITGS A+ A
Sbjct: 288 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTITGSAASISLA 344
Query: 470 QYLISQRVTYEQGVRASN 487
QYLI+ R++ E G S+
Sbjct: 345 QYLINVRLSSETGGMGSS 362
Score = 47.8 bits (112), Expect = 2e-05
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 401 AAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTIT 460
AA + + VP + G+++GKGG + E +E TGA++Q++ G+ LP + R +TI
Sbjct: 92 AASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERAITIA 149
Query: 461 GSP 463
G P
Sbjct: 150 GIP 152
Score = 39.3 bits (90), Expect = 0.008
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKA 192
+L +PN G IIG+ GA + + + SGA ++++ EG +R VT++G + A
Sbjct: 288 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGST--DRQVTITGSAASISLA 344
Score = 33.5 bits (75), Expect = 0.45
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 95
++ IP+ G IIG+ G I ++++ +GA IK++ + G+T+R + G+A +++
Sbjct: 288 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTITGSAASISLA 344
Query: 96 HSFI 99
I
Sbjct: 345 QYLI 348
Score = 29.6 bits (65), Expect = 6.5
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 418 VGAILGKGGKTLVEYQELTGARIQISK 444
VG+I+GK G+++ + +E +GARI IS+
Sbjct: 25 VGSIIGKKGESVKKMREESGARINISE 51
>gi|56118219 insulin-like growth factor 2 mRNA binding protein 2
isoform b [Homo sapiens]
Length = 556
Score = 77.4 bits (189), Expect = 3e-14
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 13/198 (6%)
Query: 18 EVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPG 77
E++ + T E LK+L + G +IGK G+ + +++ ETG I +S +D
Sbjct: 260 EIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIY 319
Query: 78 TTERVCLVQGTAEALNAVHSFIAEKVRE-----IPQAMTKPEVVNILQPQTTMNP----- 127
ER V+GT EA + I +K+RE + T + L P P
Sbjct: 320 NPERTITVKGTVEACASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHH 379
Query: 128 --DRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGE 185
+ L +P G IIGK GA +K + +GA ++++ EG ++ ER+V ++G
Sbjct: 380 SYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEGPDVSERMVIITGP 438
Query: 186 PEQVHKAVSAIVQKVQED 203
PE KA I K++E+
Sbjct: 439 PEAQFKAQGRIFGKLKEE 456
Score = 68.6 bits (166), Expect = 1e-11
Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 19/174 (10%)
Query: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
+ + IP+ A G+IIGK G I QL + GA+IK++ ++ P +ER+ ++ G EA
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFK 444
Query: 95 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVK 154
I K++E N P+ + +A + VP+STAG +IGKGG TV
Sbjct: 445 AQGRIFGKLKE----------ENFFNPKEEVK----LEAHIRVPSSTAGRVIGKGGKTVN 490
Query: 155 AVMEQSGAWVQLSQKPEGINLQERVVTVSGE---PEQVHKAVSAIVQKVQEDPQ 205
+ + A V + + +E +V + G + + + IVQ+V++ Q
Sbjct: 491 ELQNLTSAEVIVPRDQTPDENEEVIVRIIGHFFASQTAQRKIREIVQQVKQQEQ 544
Score = 58.5 bits (140), Expect = 1e-08
Identities = 44/172 (25%), Positives = 80/172 (46%), Gaps = 18/172 (10%)
Query: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
++ L++L+P+ G+IIGK G TI + K+T + + + + ++ G E+ + T E
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEG 250
Query: 92 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGA 151
+E R I + M K L + + K++ N G +IGK G
Sbjct: 251 -------TSEACRMILEIMQKEADETKLAEEIPL--------KILAHNGLVGRLIGKEGR 295
Query: 152 TVKAVMEQSGAWVQLSQKPE-GINLQERVVTVSGEPEQVHKAVSAIVQKVQE 202
+K + ++G + +S + I ER +TV G E A I++K++E
Sbjct: 296 NLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACASAEIEIMKKLRE 347
Score = 42.7 bits (99), Expect = 7e-04
Identities = 38/115 (33%), Positives = 48/115 (41%), Gaps = 3/115 (2%)
Query: 379 GPLVAAAAAAGAAGGFLTAEKL--AAESAKELVEIAVPENLVGAILGKGGKTLVEYQELT 436
GP A A G G L E E K I VP + G ++GKGGKT+ E Q LT
Sbjct: 437 GPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLT 496
Query: 437 GARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRVTYEQGVRASNPQKV 491
A + I + + V I G A+Q AQ I + V + PQ V
Sbjct: 497 SAEV-IVPRDQTPDENEEVIVRIIGHFFASQTAQRKIREIVQQVKQQEQKYPQGV 550
Score = 40.0 bits (92), Expect = 0.005
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 406 KELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAA 465
+E+V + +P VGAI+GK G + + GA I+I+ P R V ITG P A
Sbjct: 384 QEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEA 441
Query: 466 TQAAQ 470
AQ
Sbjct: 442 QFKAQ 446
Score = 38.5 bits (88), Expect = 0.014
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 26 NTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCL- 84
N EE + + +PS AG +IGKGG+T+ +LQ T A + + +D P E V +
Sbjct: 460 NPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV--PRDQTPDENEEVIVR 517
Query: 85 VQGTAEALNAVHSFIAEKVREIPQAMTK 112
+ G A I E V+++ Q K
Sbjct: 518 IIGHFFASQTAQRKIREIVQQVKQQEQK 545
Score = 38.1 bits (87), Expect = 0.018
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 468
+ I VP VGAI+GK G T+ + T +R+ I +K G + VTI +P T
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 253
Query: 469 AQYLI 473
A +I
Sbjct: 254 ACRMI 258
Score = 35.8 bits (81), Expect = 0.091
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 468
++I LVG ++GK G+ L + + TG +I IS + R +T+ G+ A +
Sbjct: 277 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACAS 336
Query: 469 AQYLISQ--RVTYEQGVRASN 487
A+ I + R +E + A N
Sbjct: 337 AEIEIMKKLREAFENDMLAVN 357
>gi|193083114 poly(rC) binding protein 2 isoform g [Homo sapiens]
Length = 318
Score = 77.0 bits (188), Expect = 4e-14
Identities = 52/173 (30%), Positives = 91/173 (52%), Gaps = 21/173 (12%)
Query: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
+++L+ GSIIGK G+++ ++++E+GA I +S+ ER+ + G A+
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 95 VHSFIAEKVRE-IPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATV 153
+ I +K+ E I +MT + +P T+ +L+VP S G +IGKGG +
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAAS--RPPVTL--------RLVVPASQCGSLIGKGGCKI 120
Query: 154 KAVMEQSGAWVQLS--QKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 204
K + E +GA VQ++ P N ER +T++G P+ + + V I + E P
Sbjct: 121 KEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESP 170
Score = 60.8 bits (146), Expect = 3e-09
Identities = 31/78 (39%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
Query: 410 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 469
E+ +P +L+G I+G+ G + E ++++GA+I+I+ E G+ +R+VTITGS A+ A
Sbjct: 244 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTITGSAASISLA 300
Query: 470 QYLISQRVTYEQGVRASN 487
QYLI+ R++ E G S+
Sbjct: 301 QYLINVRLSSETGGMGSS 318
Score = 57.8 bits (138), Expect = 2e-08
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 51/205 (24%)
Query: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
L++++P+ GS+IGKGG I ++++ TGA ++++ D P +TER + G +++
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG--DMLPNSTERAITIAGIPQSIIE 157
Query: 95 VHSFIAEKVREIPQ------------------------------AMTKPEVVNILQ---- 120
I + E P A+ +P++ + Q
Sbjct: 158 CVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQ 217
Query: 121 ----PQTTMNP------DRAKQA---KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLS 167
P T N D + Q +L +PN G IIG+ GA + + + SGA ++++
Sbjct: 218 QSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA 277
Query: 168 QKPEGINLQERVVTVSGEPEQVHKA 192
EG +R VT++G + A
Sbjct: 278 NPVEGST--DRQVTITGSAASISLA 300
Score = 54.3 bits (129), Expect = 2e-07
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 193
+L++ G IIGK G +VK + E+SGA + +S+ N ER++T++G + KA
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPERIITLAGPTNAIFKAF 72
Query: 194 SAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASG 251
+ I+ K++ED SS + NS P + V+PA+ S G
Sbjct: 73 AMIIDKLEEDISSS-------------MTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Score = 47.8 bits (112), Expect = 2e-05
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 401 AAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTIT 460
AA + + VP + G+++GKGG + E +E TGA++Q++ G+ LP + R +TI
Sbjct: 92 AASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERAITIA 149
Query: 461 GSP 463
G P
Sbjct: 150 GIP 152
Score = 33.5 bits (75), Expect = 0.45
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 95
++ IP+ G IIG+ G I ++++ +GA IK++ + G+T+R + G+A +++
Sbjct: 244 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTITGSAASISLA 300
Query: 96 HSFI 99
I
Sbjct: 301 QYLI 304
Score = 29.6 bits (65), Expect = 6.5
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 418 VGAILGKGGKTLVEYQELTGARIQISK 444
VG+I+GK G+++ + +E +GARI IS+
Sbjct: 25 VGSIIGKKGESVKKMREESGARINISE 51
>gi|193083110 poly(rC) binding protein 2 isoform e [Homo sapiens]
Length = 361
Score = 77.0 bits (188), Expect = 4e-14
Identities = 52/173 (30%), Positives = 91/173 (52%), Gaps = 21/173 (12%)
Query: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
+++L+ GSIIGK G+++ ++++E+GA I +S+ ER+ + G A+
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 95 VHSFIAEKVRE-IPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATV 153
+ I +K+ E I +MT + +P T+ +L+VP S G +IGKGG +
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAAS--RPPVTL--------RLVVPASQCGSLIGKGGCKI 120
Query: 154 KAVMEQSGAWVQLS--QKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 204
K + E +GA VQ++ P N ER +T++G P+ + + V I + E P
Sbjct: 121 KEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESP 170
Score = 60.8 bits (146), Expect = 3e-09
Identities = 31/78 (39%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
Query: 410 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 469
E+ +P +L+G I+G+ G + E ++++GA+I+I+ E G+ +R+VTITGS A+ A
Sbjct: 287 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTITGSAASISLA 343
Query: 470 QYLISQRVTYEQGVRASN 487
QYLI+ R++ E G S+
Sbjct: 344 QYLINVRLSSETGGMGSS 361
Score = 54.3 bits (129), Expect = 2e-07
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 193
+L++ G IIGK G +VK + E+SGA + +S+ N ER++T++G + KA
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPERIITLAGPTNAIFKAF 72
Query: 194 SAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASG 251
+ I+ K++ED SS + NS P + V+PA+ S G
Sbjct: 73 AMIIDKLEEDISSS-------------MTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Score = 47.8 bits (112), Expect = 2e-05
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 401 AAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTIT 460
AA + + VP + G+++GKGG + E +E TGA++Q++ G+ LP + R +TI
Sbjct: 92 AASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERAITIA 149
Query: 461 GSP 463
G P
Sbjct: 150 GIP 152
Score = 39.3 bits (90), Expect = 0.008
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKA 192
+L +PN G IIG+ GA + + + SGA ++++ EG +R VT++G + A
Sbjct: 287 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGST--DRQVTITGSAASISLA 343
Score = 33.5 bits (75), Expect = 0.45
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 95
++ IP+ G IIG+ G I ++++ +GA IK++ + G+T+R + G+A +++
Sbjct: 287 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTITGSAASISLA 343
Query: 96 HSFI 99
I
Sbjct: 344 QYLI 347
Score = 29.6 bits (65), Expect = 6.5
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 418 VGAILGKGGKTLVEYQELTGARIQISK 444
VG+I+GK G+++ + +E +GARI IS+
Sbjct: 25 VGSIIGKKGESVKKMREESGARINISE 51
>gi|148833484 poly(rC) binding protein 2 isoform c [Homo sapiens]
Length = 331
Score = 77.0 bits (188), Expect = 4e-14
Identities = 52/173 (30%), Positives = 91/173 (52%), Gaps = 21/173 (12%)
Query: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
+++L+ GSIIGK G+++ ++++E+GA I +S+ ER+ + G A+
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 95 VHSFIAEKVRE-IPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATV 153
+ I +K+ E I +MT + +P T+ +L+VP S G +IGKGG +
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAAS--RPPVTL--------RLVVPASQCGSLIGKGGCKI 120
Query: 154 KAVMEQSGAWVQLS--QKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 204
K + E +GA VQ++ P N ER +T++G P+ + + V I + E P
Sbjct: 121 KEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESP 170
Score = 60.8 bits (146), Expect = 3e-09
Identities = 31/78 (39%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
Query: 410 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 469
E+ +P +L+G I+G+ G + E ++++GA+I+I+ E G+ +R+VTITGS A+ A
Sbjct: 257 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTITGSAASISLA 313
Query: 470 QYLISQRVTYEQGVRASN 487
QYLI+ R++ E G S+
Sbjct: 314 QYLINVRLSSETGGMGSS 331
Score = 54.3 bits (129), Expect = 2e-07
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 193
+L++ G IIGK G +VK + E+SGA + +S+ N ER++T++G + KA
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPERIITLAGPTNAIFKAF 72
Query: 194 SAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASG 251
+ I+ K++ED SS + NS P + V+PA+ S G
Sbjct: 73 AMIIDKLEEDISSS-------------MTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Score = 47.8 bits (112), Expect = 2e-05
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 401 AAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTIT 460
AA + + VP + G+++GKGG + E +E TGA++Q++ G+ LP + R +TI
Sbjct: 92 AASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERAITIA 149
Query: 461 GSP 463
G P
Sbjct: 150 GIP 152
Score = 39.3 bits (90), Expect = 0.008
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKA 192
+L +PN G IIG+ GA + + + SGA ++++ EG +R VT++G + A
Sbjct: 257 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGST--DRQVTITGSAASISLA 313
Score = 33.5 bits (75), Expect = 0.45
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 95
++ IP+ G IIG+ G I ++++ +GA IK++ + G+T+R + G+A +++
Sbjct: 257 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTITGSAASISLA 313
Query: 96 HSFI 99
I
Sbjct: 314 QYLI 317
Score = 29.6 bits (65), Expect = 6.5
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 418 VGAILGKGGKTLVEYQELTGARIQISK 444
VG+I+GK G+++ + +E +GARI IS+
Sbjct: 25 VGSIIGKKGESVKKMREESGARINISE 51
>gi|222352151 poly(rC) binding protein 1 [Homo sapiens]
Length = 356
Score = 75.1 bits (183), Expect = 1e-13
Identities = 52/178 (29%), Positives = 94/178 (52%), Gaps = 25/178 (14%)
Query: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
+++L+ GSIIGK G+++ ++++E+GA I +S+ ER+ + G A+
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 95 VHSFIAEKVRE-IPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATV 153
+ I +K+ E I +MT + +P T+ +L+VP + G +IGKGG +
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAAS--RPPVTL--------RLVVPATQCGSLIGKGGCKI 120
Query: 154 KAVMEQSGAWVQLS--QKPEGINLQERVVTVSGEPEQVHKAVSAI----VQKVQEDPQ 205
K + E +GA VQ++ P N ER +T++G P+ V + V I ++ + + PQ
Sbjct: 121 KEIRESTGAQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQ 175
Score = 64.7 bits (156), Expect = 2e-10
Identities = 32/77 (41%), Positives = 53/77 (68%), Gaps = 3/77 (3%)
Query: 410 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 469
E+ +P NL+G I+G+ G + E ++++GA+I+I+ E G+ R+VTITGS A+ A
Sbjct: 283 ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVE---GSSGRQVTITGSAASISLA 339
Query: 470 QYLISQRVTYEQGVRAS 486
QYLI+ R++ E+G+ S
Sbjct: 340 QYLINARLSSEKGMGCS 356
Score = 54.7 bits (130), Expect = 2e-07
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 193
+L++ G IIGK G +VK + E+SGA + +S+ N ER++T++G + KA
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG----NCPERIITLTGPTNAIFKAF 72
Query: 194 SAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASG 251
+ I+ K++ED SS + NS P + V+PA S G
Sbjct: 73 AMIIDKLEEDINSS-------------MTNSTAASRPPVTLRLVVPATQCGSLIGKGG 117
Score = 47.4 bits (111), Expect = 3e-05
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 401 AAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTIT 460
AA + + VP G+++GKGG + E +E TGA++Q++ G+ LP + R +TI
Sbjct: 92 AASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERAITIA 149
Query: 461 GSP 463
G P
Sbjct: 150 GVP 152
Score = 38.9 bits (89), Expect = 0.011
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKA 192
+L +PN+ G IIG+ GA + + + SGA ++++ EG + R VT++G + A
Sbjct: 283 ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSS--GRQVTITGSAASISLA 339
Score = 31.2 bits (69), Expect = 2.2
Identities = 17/64 (26%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 95
++ IP+ G IIG+ G I ++++ +GA IK++ + G++ R + G+A +++
Sbjct: 283 ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVE---GSSGRQVTITGSAASISLA 339
Query: 96 HSFI 99
I
Sbjct: 340 QYLI 343
Score = 30.8 bits (68), Expect = 2.9
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Query: 418 VGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRV 477
VG+I+GK G+++ +E +GARI IS+ R +T+TG A A +I ++
Sbjct: 25 VGSIIGKKGESVKRIREESGARINISE-----GNCPERIITLTGPTNAIFKAFAMIIDKL 79
Query: 478 TYEQGVRAS 486
E+ + +S
Sbjct: 80 --EEDINSS 86
>gi|193083112 poly(rC) binding protein 2 isoform f [Homo sapiens]
Length = 335
Score = 74.7 bits (182), Expect = 2e-13
Identities = 50/165 (30%), Positives = 88/165 (53%), Gaps = 21/165 (12%)
Query: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
+++L+ GSIIGK G+++ ++++E+GA I +S+ ER+ + G A+
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 95 VHSFIAEKVRE-IPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATV 153
+ I +K+ E I +MT + +P T+ +L+VP S G +IGKGG +
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAAS--RPPVTL--------RLVVPASQCGSLIGKGGCKI 120
Query: 154 KAVMEQSGAWVQLS--QKPEGINLQERVVTVSGEPEQVHKAVSAI 196
K + E +GA VQ++ P N ER +T++G P+ + + V I
Sbjct: 121 KEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQI 162
Score = 60.8 bits (146), Expect = 3e-09
Identities = 31/78 (39%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
Query: 410 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 469
E+ +P +L+G I+G+ G + E ++++GA+I+I+ E G+ +R+VTITGS A+ A
Sbjct: 261 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTITGSAASISLA 317
Query: 470 QYLISQRVTYEQGVRASN 487
QYLI+ R++ E G S+
Sbjct: 318 QYLINVRLSSETGGMGSS 335
Score = 54.3 bits (129), Expect = 2e-07
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 193
+L++ G IIGK G +VK + E+SGA + +S+ N ER++T++G + KA
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPERIITLAGPTNAIFKAF 72
Query: 194 SAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASG 251
+ I+ K++ED SS + NS P + V+PA+ S G
Sbjct: 73 AMIIDKLEEDISSS-------------MTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Score = 50.8 bits (120), Expect = 3e-06
Identities = 49/222 (22%), Positives = 90/222 (40%), Gaps = 68/222 (30%)
Query: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLV----QGTAE 90
L++++P+ GS+IGKGG I ++++ TGA ++++ D P +TER + Q E
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG--DMLPNSTERAITIAGIPQSIIE 157
Query: 91 ALNAVHSFIAEKVREIPQ------------------------------AMTKPEVVNILQ 120
+ + + E + + P A+ +P++ + Q
Sbjct: 158 CVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQ 217
Query: 121 --------PQTTMNP-------------------DRAKQA---KLIVPNSTAGLIIGKGG 150
P T N D + Q +L +PN G IIG+ G
Sbjct: 218 LAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQG 277
Query: 151 ATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKA 192
A + + + SGA ++++ EG +R VT++G + A
Sbjct: 278 AKINEIRQMSGAQIKIANPVEGST--DRQVTITGSAASISLA 317
Score = 47.8 bits (112), Expect = 2e-05
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 401 AAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTIT 460
AA + + VP + G+++GKGG + E +E TGA++Q++ G+ LP + R +TI
Sbjct: 92 AASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERAITIA 149
Query: 461 GSP 463
G P
Sbjct: 150 GIP 152
Score = 33.5 bits (75), Expect = 0.45
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 95
++ IP+ G IIG+ G I ++++ +GA IK++ + G+T+R + G+A +++
Sbjct: 261 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTITGSAASISLA 317
Query: 96 HSFI 99
I
Sbjct: 318 QYLI 321
Score = 29.6 bits (65), Expect = 6.5
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 418 VGAILGKGGKTLVEYQELTGARIQISK 444
VG+I+GK G+++ + +E +GARI IS+
Sbjct: 25 VGSIIGKKGESVKKMREESGARINISE 51
>gi|193083108 poly(rC) binding protein 2 isoform d [Homo sapiens]
Length = 365
Score = 74.7 bits (182), Expect = 2e-13
Identities = 50/165 (30%), Positives = 88/165 (53%), Gaps = 21/165 (12%)
Query: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
+++L+ GSIIGK G+++ ++++E+GA I +S+ ER+ + G A+
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 95 VHSFIAEKVRE-IPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATV 153
+ I +K+ E I +MT + +P T+ +L+VP S G +IGKGG +
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAAS--RPPVTL--------RLVVPASQCGSLIGKGGCKI 120
Query: 154 KAVMEQSGAWVQLS--QKPEGINLQERVVTVSGEPEQVHKAVSAI 196
K + E +GA VQ++ P N ER +T++G P+ + + V I
Sbjct: 121 KEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQI 162
Score = 60.8 bits (146), Expect = 3e-09
Identities = 31/78 (39%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
Query: 410 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 469
E+ +P +L+G I+G+ G + E ++++GA+I+I+ E G+ +R+VTITGS A+ A
Sbjct: 291 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTITGSAASISLA 347
Query: 470 QYLISQRVTYEQGVRASN 487
QYLI+ R++ E G S+
Sbjct: 348 QYLINVRLSSETGGMGSS 365
Score = 54.3 bits (129), Expect = 2e-07
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 193
+L++ G IIGK G +VK + E+SGA + +S+ N ER++T++G + KA
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPERIITLAGPTNAIFKAF 72
Query: 194 SAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASG 251
+ I+ K++ED SS + NS P + V+PA+ S G
Sbjct: 73 AMIIDKLEEDISSS-------------MTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Score = 47.8 bits (112), Expect = 2e-05
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 401 AAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTIT 460
AA + + VP + G+++GKGG + E +E TGA++Q++ G+ LP + R +TI
Sbjct: 92 AASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERAITIA 149
Query: 461 GSP 463
G P
Sbjct: 150 GIP 152
Score = 39.3 bits (90), Expect = 0.008
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKA 192
+L +PN G IIG+ GA + + + SGA ++++ EG +R VT++G + A
Sbjct: 291 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGST--DRQVTITGSAASISLA 347
Score = 33.5 bits (75), Expect = 0.45
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 95
++ IP+ G IIG+ G I ++++ +GA IK++ + G+T+R + G+A +++
Sbjct: 291 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTITGSAASISLA 347
Query: 96 HSFI 99
I
Sbjct: 348 QYLI 351
Score = 29.6 bits (65), Expect = 6.5
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 418 VGAILGKGGKTLVEYQELTGARIQISK 444
VG+I+GK G+++ + +E +GARI IS+
Sbjct: 25 VGSIIGKKGESVKKMREESGARINISE 51
>gi|14141168 poly(rC) binding protein 2 isoform a [Homo sapiens]
Length = 366
Score = 74.7 bits (182), Expect = 2e-13
Identities = 50/165 (30%), Positives = 88/165 (53%), Gaps = 21/165 (12%)
Query: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
+++L+ GSIIGK G+++ ++++E+GA I +S+ ER+ + G A+
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 95 VHSFIAEKVRE-IPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATV 153
+ I +K+ E I +MT + +P T+ +L+VP S G +IGKGG +
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAAS--RPPVTL--------RLVVPASQCGSLIGKGGCKI 120
Query: 154 KAVMEQSGAWVQLS--QKPEGINLQERVVTVSGEPEQVHKAVSAI 196
K + E +GA VQ++ P N ER +T++G P+ + + V I
Sbjct: 121 KEIRESTGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQI 162
Score = 60.8 bits (146), Expect = 3e-09
Identities = 31/78 (39%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
Query: 410 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 469
E+ +P +L+G I+G+ G + E ++++GA+I+I+ E G+ +R+VTITGS A+ A
Sbjct: 292 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTITGSAASISLA 348
Query: 470 QYLISQRVTYEQGVRASN 487
QYLI+ R++ E G S+
Sbjct: 349 QYLINVRLSSETGGMGSS 366
Score = 54.3 bits (129), Expect = 2e-07
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 193
+L++ G IIGK G +VK + E+SGA + +S+ N ER++T++G + KA
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPERIITLAGPTNAIFKAF 72
Query: 194 SAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASG 251
+ I+ K++ED SS + NS P + V+PA+ S G
Sbjct: 73 AMIIDKLEEDISSS-------------MTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Score = 47.8 bits (112), Expect = 2e-05
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 401 AAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTIT 460
AA + + VP + G+++GKGG + E +E TGA++Q++ G+ LP + R +TI
Sbjct: 92 AASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERAITIA 149
Query: 461 GSP 463
G P
Sbjct: 150 GIP 152
Score = 39.3 bits (90), Expect = 0.008
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKA 192
+L +PN G IIG+ GA + + + SGA ++++ EG +R VT++G + A
Sbjct: 292 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGST--DRQVTITGSAASISLA 348
Score = 33.5 bits (75), Expect = 0.45
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 95
++ IP+ G IIG+ G I ++++ +GA IK++ + G+T+R + G+A +++
Sbjct: 292 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTITGSAASISLA 348
Query: 96 HSFI 99
I
Sbjct: 349 QYLI 352
Score = 29.6 bits (65), Expect = 6.5
Identities = 13/27 (48%), Positives = 22/27 (81%)
Query: 418 VGAILGKGGKTLVEYQELTGARIQISK 444
VG+I+GK G+++ + +E +GARI IS+
Sbjct: 25 VGSIIGKKGESVKKMREESGARINISE 51
>gi|17402900 far upstream element-binding protein [Homo sapiens]
Length = 644
Score = 74.3 bits (181), Expect = 2e-13
Identities = 67/245 (27%), Positives = 101/245 (41%), Gaps = 28/245 (11%)
Query: 28 GEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT-ERVCLVQ 86
G EG + V IP +A G +IG+ G+ I ++Q + G I+ GTT ER+ +
Sbjct: 274 GNEG---IDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDD----GTTPERIAQIT 326
Query: 87 GTAEALNAVHSFIAEKVREIPQAMTK---PEVVNILQPQTTMN---PDRAKQAKLIVPNS 140
G + I + +R + P + Q N P ++ IVP
Sbjct: 327 GPPDRCQHAAEIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTG 386
Query: 141 TAGLIIGKGGATVKAVMEQSGAWVQLSQK-PEGINLQERVVTVSGEPEQVHKAVSAIVQK 199
GLIIGKGG T+K++ +QSGA ++L + P + ++ T+ G P+Q+ A I +K
Sbjct: 387 KTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEK 446
Query: 200 VQEDPQSSSCLNISYANVAGPVANSNPTG--SPYASPADVLPAAAAASAAAASGLLGPAG 257
+ N GP P G P+ P P A GP G
Sbjct: 447 IG-----------GPVNPLGPPVPHGPHGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPG 495
Query: 258 LAGVG 262
A G
Sbjct: 496 PAPHG 500
Score = 72.8 bits (177), Expect = 7e-13
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 25/201 (12%)
Query: 5 APDSRKRPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGA 64
AP + + PP RS EE + +P G IIG+GG+ I ++Q+E+G
Sbjct: 79 APQNDSFGTQLPPMHQQQSRSVMTEEYK------VPDGMVGFIIGRGGEQISRIQQESGC 132
Query: 65 TIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSF---IAEKVREIPQAMTKPEVVNILQP 121
I+++ G ER C++ GT E++ + I EK R P N +Q
Sbjct: 133 KIQIAPDSG---GLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQ- 188
Query: 122 QTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVT 181
++++P S AGL+IGKGG T+K + E++G + + Q ++ +
Sbjct: 189 ------------EIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLR 236
Query: 182 VSGEPEQVHKAVSAIVQKVQE 202
++G+P +V +A +++ +++
Sbjct: 237 ITGDPYKVQQAKEMVLELIRD 257
Score = 49.7 bits (117), Expect = 6e-06
Identities = 45/157 (28%), Positives = 66/157 (42%), Gaps = 50/157 (31%)
Query: 368 AGAGGGAGGGGGPLVA-----------AAAAAGAAGGFLT-------------------- 396
AG GGG GGGGG A AA G AG L
Sbjct: 15 AGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGYGGQKRPLEDGDQPD 74
Query: 397 AEKLAAES----------------AKELVEIAVPENLVGAILGKGGKTLVEYQELTGARI 440
A+K+A ++ + E VP+ +VG I+G+GG+ + Q+ +G +I
Sbjct: 75 AKKVAPQNDSFGTQLPPMHQQQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKI 134
Query: 441 QISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRV 477
QI+ LP R +TG+P + Q+A+ L+ Q V
Sbjct: 135 QIAPDSGGLP---ERSCMLTGTPESVQSAKRLLDQIV 168
Score = 43.5 bits (101), Expect = 4e-04
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 410 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 469
EI +P + G ++GKGG+T+ + QE G ++ + + G G ++ + ITG P Q A
Sbjct: 189 EIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGA-DKPLRITGDPYKVQQA 247
Query: 470 QYLISQRVTYEQGVR 484
+ ++ + + + G R
Sbjct: 248 KEMVLELIRDQGGFR 262
Score = 41.6 bits (96), Expect = 0.002
Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 4/104 (3%)
Query: 374 AGGGGGPLVAAAAAAGAAGGFLTAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQ 433
AG GGP G + + + VP G I+GKGG+T+
Sbjct: 348 AGNPGGPGPGGRGRGRGQGNW----NMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSIS 403
Query: 434 ELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRV 477
+ +GARI++ + + TI G+P A+ LI +++
Sbjct: 404 QQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 447
Score = 37.4 bits (85), Expect = 0.031
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 407 ELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAAT 466
E +++ +P VG ++G+ G+ + + Q G RIQ P R ITG P
Sbjct: 276 EGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTP---ERIAQITGPPDRC 332
Query: 467 QAAQYLISQRVTYEQGVRASNP 488
Q A +I+ + + V+A NP
Sbjct: 333 QHAAEIITDLL---RSVQAGNP 351
>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
Length = 476
Score = 71.2 bits (173), Expect = 2e-12
Identities = 62/168 (36%), Positives = 77/168 (45%), Gaps = 25/168 (14%)
Query: 230 PYASPADVLPAAAAASAAAASGLLGPAGLAGVGAFPAALPAFSGTDLLAISTALNTLASY 289
P+ AAAA+ AAAA+ + + F A +S +LL
Sbjct: 288 PHVGVTAAAAAAAASGAAAAASSPFATSIRPLDTFRALSHPYSRPELLC----------- 336
Query: 290 GYNTNSLGLGLNSAAASGVLAAVAAGANPAAAAAANLLASYAGEAGAGPAGGAAPPP--- 346
+ GL AAA+G+ +A +A A AAAAAA AS A AGA P+GG+AP
Sbjct: 337 --SFRHPGLYQAPAAAAGLNSAASAAAAAAAAAAA---ASSAAAAGAPPSGGSAPCSCLS 391
Query: 347 -PPPPGALGSFALAAAANGYLGAGAGGGAGGGGGPLVAAAAAAGAAGG 393
A + A AAAA G G G GGG GGGGG AGA GG
Sbjct: 392 CHSSQSAAAAAAAAAAALGSRGGGGGGGGGGGGG-----GGGAGAGGG 434
Score = 31.2 bits (69), Expect = 2.2
Identities = 39/129 (30%), Positives = 46/129 (35%), Gaps = 12/129 (9%)
Query: 307 GVLAAVAAGANPAAAAAANLLASYAGEAGAGPAGGAAPPPPPPPGALGSF---------A 357
GV AA AA A AAAAA+ + +A A P P L SF A
Sbjct: 291 GVTAAAAAAAASGAAAAAS--SPFATSIRPLDTFRALSHPYSRPELLCSFRHPGLYQAPA 348
Query: 358 LAAAANGYLGAGAGGGAGGGGGPLVAAAAAAGAAGGFLTAEKLAAESAKELVEIAVPENL 417
AA N A A A AAAA A +GG L+ S++ A
Sbjct: 349 AAAGLNSAASAAAAAAAAAAAASS-AAAAGAPPSGGSAPCSCLSCHSSQSAAAAAAAAAA 407
Query: 418 VGAILGKGG 426
G GG
Sbjct: 408 ALGSRGGGG 416
>gi|145312259 tudor and KH domain containing isoform a [Homo
sapiens]
Length = 561
Score = 71.2 bits (173), Expect = 2e-12
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 34/180 (18%)
Query: 30 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG-- 87
E + +++ +P A IIG+ G I QL+K+TGA I + D ERV L+ G
Sbjct: 50 EDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV----DTEDVGDERVLLISGFP 105
Query: 88 --TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLI 145
+A A+H + E Q L VP + G I
Sbjct: 106 VQVCKAKAAIHQILTENTPVSEQ--------------------------LSVPQRSVGRI 139
Query: 146 IGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQ 205
IG+GG T++++ + SGA + ++ EG L R++ +SG ++V A I++KV ED +
Sbjct: 140 IGRGGETIRSICKASGAKITCDKESEGTLLLSRLIKISGTQKEVAAAKHLILEKVSEDEE 199
Score = 49.7 bits (117), Expect = 6e-06
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 132 QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHK 191
+ ++ VP LIIG+ GA +K + +Q+GA + + + G ERV+ +SG P QV K
Sbjct: 54 EIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVG---DERVLLISGFPVQVCK 110
Query: 192 AVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPT 227
A +AI Q + E+ S L++ +V + T
Sbjct: 111 AKAAIHQILTENTPVSEQLSVPQRSVGRIIGRGGET 146
Score = 45.8 bits (107), Expect = 9e-05
Identities = 26/88 (29%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 399 KLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGT--RNRR 456
++ E+ +++VP+ VG I+G+GG+T+ + +GA+I K+ E GT +R
Sbjct: 117 QILTENTPVSEQLSVPQRSVGRIIGRGGETIRSICKASGAKITCDKESE---GTLLLSRL 173
Query: 457 VTITGSPAATQAAQYLISQRVTYEQGVR 484
+ I+G+ AA++LI ++V+ ++ +R
Sbjct: 174 IKISGTQKEVAAAKHLILEKVSEDEELR 201
Score = 32.0 bits (71), Expect = 1.3
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 468
+E+ VP+ V I+G+ G + + ++ TGARI + + R + I+G P
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDV----GDERVLLISGFPVQVCK 110
Query: 469 AQYLISQRVTYEQGV--RASNPQK 490
A+ I Q +T V + S PQ+
Sbjct: 111 AKAAIHQILTENTPVSEQLSVPQR 134
>gi|145312270 tudor and KH domain containing isoform a [Homo
sapiens]
Length = 561
Score = 71.2 bits (173), Expect = 2e-12
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 34/180 (18%)
Query: 30 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG-- 87
E + +++ +P A IIG+ G I QL+K+TGA I + D ERV L+ G
Sbjct: 50 EDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV----DTEDVGDERVLLISGFP 105
Query: 88 --TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLI 145
+A A+H + E Q L VP + G I
Sbjct: 106 VQVCKAKAAIHQILTENTPVSEQ--------------------------LSVPQRSVGRI 139
Query: 146 IGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQ 205
IG+GG T++++ + SGA + ++ EG L R++ +SG ++V A I++KV ED +
Sbjct: 140 IGRGGETIRSICKASGAKITCDKESEGTLLLSRLIKISGTQKEVAAAKHLILEKVSEDEE 199
Score = 49.7 bits (117), Expect = 6e-06
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 132 QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHK 191
+ ++ VP LIIG+ GA +K + +Q+GA + + + G ERV+ +SG P QV K
Sbjct: 54 EIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVG---DERVLLISGFPVQVCK 110
Query: 192 AVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPT 227
A +AI Q + E+ S L++ +V + T
Sbjct: 111 AKAAIHQILTENTPVSEQLSVPQRSVGRIIGRGGET 146
Score = 45.8 bits (107), Expect = 9e-05
Identities = 26/88 (29%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 399 KLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGT--RNRR 456
++ E+ +++VP+ VG I+G+GG+T+ + +GA+I K+ E GT +R
Sbjct: 117 QILTENTPVSEQLSVPQRSVGRIIGRGGETIRSICKASGAKITCDKESE---GTLLLSRL 173
Query: 457 VTITGSPAATQAAQYLISQRVTYEQGVR 484
+ I+G+ AA++LI ++V+ ++ +R
Sbjct: 174 IKISGTQKEVAAAKHLILEKVSEDEELR 201
Score = 32.0 bits (71), Expect = 1.3
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 468
+E+ VP+ V I+G+ G + + ++ TGARI + + R + I+G P
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDV----GDERVLLISGFPVQVCK 110
Query: 469 AQYLISQRVTYEQGV--RASNPQK 490
A+ I Q +T V + S PQ+
Sbjct: 111 AKAAIHQILTENTPVSEQLSVPQR 134
>gi|145312256 tudor and KH domain containing isoform a [Homo
sapiens]
Length = 561
Score = 71.2 bits (173), Expect = 2e-12
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 34/180 (18%)
Query: 30 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG-- 87
E + +++ +P A IIG+ G I QL+K+TGA I + D ERV L+ G
Sbjct: 50 EDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV----DTEDVGDERVLLISGFP 105
Query: 88 --TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLI 145
+A A+H + E Q L VP + G I
Sbjct: 106 VQVCKAKAAIHQILTENTPVSEQ--------------------------LSVPQRSVGRI 139
Query: 146 IGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQ 205
IG+GG T++++ + SGA + ++ EG L R++ +SG ++V A I++KV ED +
Sbjct: 140 IGRGGETIRSICKASGAKITCDKESEGTLLLSRLIKISGTQKEVAAAKHLILEKVSEDEE 199
Score = 49.7 bits (117), Expect = 6e-06
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 132 QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHK 191
+ ++ VP LIIG+ GA +K + +Q+GA + + + G ERV+ +SG P QV K
Sbjct: 54 EIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVG---DERVLLISGFPVQVCK 110
Query: 192 AVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPT 227
A +AI Q + E+ S L++ +V + T
Sbjct: 111 AKAAIHQILTENTPVSEQLSVPQRSVGRIIGRGGET 146
Score = 45.8 bits (107), Expect = 9e-05
Identities = 26/88 (29%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 399 KLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGT--RNRR 456
++ E+ +++VP+ VG I+G+GG+T+ + +GA+I K+ E GT +R
Sbjct: 117 QILTENTPVSEQLSVPQRSVGRIIGRGGETIRSICKASGAKITCDKESE---GTLLLSRL 173
Query: 457 VTITGSPAATQAAQYLISQRVTYEQGVR 484
+ I+G+ AA++LI ++V+ ++ +R
Sbjct: 174 IKISGTQKEVAAAKHLILEKVSEDEELR 201
Score = 32.0 bits (71), Expect = 1.3
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 468
+E+ VP+ V I+G+ G + + ++ TGARI + + R + I+G P
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDV----GDERVLLISGFPVQVCK 110
Query: 469 AQYLISQRVTYEQGV--RASNPQK 490
A+ I Q +T V + S PQ+
Sbjct: 111 AKAAIHQILTENTPVSEQLSVPQR 134
>gi|14165439 heterogeneous nuclear ribonucleoprotein K isoform a
[Homo sapiens]
Length = 464
Score = 70.5 bits (171), Expect = 3e-12
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 22/207 (10%)
Query: 10 KRPLETPPEVVCTKRS-NTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 68
KRP E E KRS NT E E L++L+ S AG++IGKGG+ I L+ + A++ +
Sbjct: 21 KRPAEDMEEEQAFKRSRNTDEMVE--LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV 78
Query: 69 SKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVRE---------IPQAMTKPEVVNIL 119
S ER+ + E + + I + E Q + + V L
Sbjct: 79 PDSSG-----PERILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECL 133
Query: 120 QPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK--PEGINLQE 177
Q D + +L++ S AG IIG GA +K + E + ++L Q+ P +
Sbjct: 134 NYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHS---TD 190
Query: 178 RVVTVSGEPEQVHKAVSAIVQKVQEDP 204
RVV + G+P++V + + I+ + E P
Sbjct: 191 RVVLIGGKPDRVVECIKIILDLISESP 217
Score = 52.8 bits (125), Expect = 7e-07
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 28/113 (24%)
Query: 365 YLGAGAGGGAGGGGGPLVAAAAAAGAAGGFLTAEKLAAESAKELVEIAVPENLVGAILGK 424
Y AG G G GGP++ ++ +P++L G+I+GK
Sbjct: 371 YSYAGGRGSYGDLGGPIITT-------------------------QVTIPKDLAGSIIGK 405
Query: 425 GGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRV 477
GG+ + + + +GA I+I E L G+ +R +TITG+ Q AQYL+ V
Sbjct: 406 GGQRIKQIRHESGASIKID---EPLEGSEDRIITITGTQDQIQNAQYLLQNSV 455
Score = 49.7 bits (117), Expect = 6e-06
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 95
+V IP AGSIIGKGGQ I Q++ E+GA+IK+ + + G+ +R+ + GT + +
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLE---GSEDRIITITGTQDQIQNA 447
Query: 96 HSFIAEKVRE 105
+ V++
Sbjct: 448 QYLLQNSVKQ 457
Score = 48.1 bits (113), Expect = 2e-05
Identities = 21/69 (30%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 193
++ +P AG IIGKGG +K + +SGA +++ + EG ++R++T++G +Q+ A
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG--SEDRIITITGTQDQIQNAQ 448
Query: 194 SAIVQKVQE 202
+ V++
Sbjct: 449 YLLQNSVKQ 457
Score = 41.6 bits (96), Expect = 0.002
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 3 PEAPDSRKRPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKET 62
P + + PLE+ + G + + L++LI AG IIG G I +L++ T
Sbjct: 115 PSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENT 174
Query: 63 GATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIP 107
TIKL ++ P +T+RV L+ G + + I + + E P
Sbjct: 175 QTTIKL--FQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESP 217
>gi|14165435 heterogeneous nuclear ribonucleoprotein K isoform b
[Homo sapiens]
Length = 463
Score = 70.5 bits (171), Expect = 3e-12
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 22/207 (10%)
Query: 10 KRPLETPPEVVCTKRS-NTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 68
KRP E E KRS NT E E L++L+ S AG++IGKGG+ I L+ + A++ +
Sbjct: 21 KRPAEDMEEEQAFKRSRNTDEMVE--LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV 78
Query: 69 SKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVRE---------IPQAMTKPEVVNIL 119
S ER+ + E + + I + E Q + + V L
Sbjct: 79 PDSSG-----PERILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECL 133
Query: 120 QPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK--PEGINLQE 177
Q D + +L++ S AG IIG GA +K + E + ++L Q+ P +
Sbjct: 134 NYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHS---TD 190
Query: 178 RVVTVSGEPEQVHKAVSAIVQKVQEDP 204
RVV + G+P++V + + I+ + E P
Sbjct: 191 RVVLIGGKPDRVVECIKIILDLISESP 217
Score = 53.5 bits (127), Expect = 4e-07
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 28/118 (23%)
Query: 365 YLGAGAGGGAGGGGGPLVAAAAAAGAAGGFLTAEKLAAESAKELVEIAVPENLVGAILGK 424
Y AG G G GGP++ ++ +P++L G+I+GK
Sbjct: 371 YSYAGGRGSYGDLGGPIITT-------------------------QVTIPKDLAGSIIGK 405
Query: 425 GGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRVTYEQG 482
GG+ + + + +GA I+I E L G+ +R +TITG+ Q AQYL+ V G
Sbjct: 406 GGQRIKQIRHESGASIKID---EPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQYSG 460
Score = 49.7 bits (117), Expect = 6e-06
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 95
+V IP AGSIIGKGGQ I Q++ E+GA+IK+ + + G+ +R+ + GT + +
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLE---GSEDRIITITGTQDQIQNA 447
Query: 96 HSFIAEKVRE 105
+ V++
Sbjct: 448 QYLLQNSVKQ 457
Score = 48.1 bits (113), Expect = 2e-05
Identities = 21/69 (30%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 193
++ +P AG IIGKGG +K + +SGA +++ + EG ++R++T++G +Q+ A
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG--SEDRIITITGTQDQIQNAQ 448
Query: 194 SAIVQKVQE 202
+ V++
Sbjct: 449 YLLQNSVKQ 457
Score = 41.6 bits (96), Expect = 0.002
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 3 PEAPDSRKRPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKET 62
P + + PLE+ + G + + L++LI AG IIG G I +L++ T
Sbjct: 115 PSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENT 174
Query: 63 GATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIP 107
TIKL ++ P +T+RV L+ G + + I + + E P
Sbjct: 175 QTTIKL--FQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESP 217
>gi|14165437 heterogeneous nuclear ribonucleoprotein K isoform a
[Homo sapiens]
Length = 464
Score = 70.5 bits (171), Expect = 3e-12
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 22/207 (10%)
Query: 10 KRPLETPPEVVCTKRS-NTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 68
KRP E E KRS NT E E L++L+ S AG++IGKGG+ I L+ + A++ +
Sbjct: 21 KRPAEDMEEEQAFKRSRNTDEMVE--LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV 78
Query: 69 SKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVRE---------IPQAMTKPEVVNIL 119
S ER+ + E + + I + E Q + + V L
Sbjct: 79 PDSSG-----PERILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECL 133
Query: 120 QPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK--PEGINLQE 177
Q D + +L++ S AG IIG GA +K + E + ++L Q+ P +
Sbjct: 134 NYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHS---TD 190
Query: 178 RVVTVSGEPEQVHKAVSAIVQKVQEDP 204
RVV + G+P++V + + I+ + E P
Sbjct: 191 RVVLIGGKPDRVVECIKIILDLISESP 217
Score = 52.8 bits (125), Expect = 7e-07
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 28/113 (24%)
Query: 365 YLGAGAGGGAGGGGGPLVAAAAAAGAAGGFLTAEKLAAESAKELVEIAVPENLVGAILGK 424
Y AG G G GGP++ ++ +P++L G+I+GK
Sbjct: 371 YSYAGGRGSYGDLGGPIITT-------------------------QVTIPKDLAGSIIGK 405
Query: 425 GGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRV 477
GG+ + + + +GA I+I E L G+ +R +TITG+ Q AQYL+ V
Sbjct: 406 GGQRIKQIRHESGASIKID---EPLEGSEDRIITITGTQDQIQNAQYLLQNSV 455
Score = 49.7 bits (117), Expect = 6e-06
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 95
+V IP AGSIIGKGGQ I Q++ E+GA+IK+ + + G+ +R+ + GT + +
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLE---GSEDRIITITGTQDQIQNA 447
Query: 96 HSFIAEKVRE 105
+ V++
Sbjct: 448 QYLLQNSVKQ 457
Score = 48.1 bits (113), Expect = 2e-05
Identities = 21/69 (30%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 193
++ +P AG IIGKGG +K + +SGA +++ + EG ++R++T++G +Q+ A
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG--SEDRIITITGTQDQIQNAQ 448
Query: 194 SAIVQKVQE 202
+ V++
Sbjct: 449 YLLQNSVKQ 457
Score = 41.6 bits (96), Expect = 0.002
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 3 PEAPDSRKRPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKET 62
P + + PLE+ + G + + L++LI AG IIG G I +L++ T
Sbjct: 115 PSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENT 174
Query: 63 GATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIP 107
TIKL ++ P +T+RV L+ G + + I + + E P
Sbjct: 175 QTTIKL--FQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESP 217
>gi|100816392 far upstream element (FUSE) binding protein 3 [Homo
sapiens]
Length = 572
Score = 69.3 bits (168), Expect = 7e-12
Identities = 41/168 (24%), Positives = 86/168 (51%), Gaps = 13/168 (7%)
Query: 39 IPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSF 98
+P G IIG+GG+ I ++Q E+G I+++ G ER C++ GT E++
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESS---GIPERPCVLTGTPESIEQAKRL 140
Query: 99 IAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVME 158
+ + V + P N + +T+ ++++P S GL+IG+GG T+K + E
Sbjct: 141 LGQIV---DRCRNGPGFHNDIDSNSTIQ-------EILIPASKVGLVIGRGGETIKQLQE 190
Query: 159 QSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQS 206
++G + + Q ++ + ++G+ +V +A +++ ++E Q+
Sbjct: 191 RTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMVLEIIREKDQA 238
Score = 64.7 bits (156), Expect = 2e-10
Identities = 58/236 (24%), Positives = 95/236 (40%), Gaps = 47/236 (19%)
Query: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
++V +P +A G +IG+ G+ I ++Q + G I+ P ER V G +
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP---ERAAQVMGPPDRCQH 312
Query: 95 VHSFIAEKVREIPQAMTKPEVVNILQPQ---------TTMNPDRAKQAKLIVPNSTAGLI 145
I+E + A + + + + P ++ VP GL+
Sbjct: 313 AAHIISELILT---AQERDGFGGLAAARGRGRGRGDWSVGAPGGVQEITYTVPADKCGLV 369
Query: 146 IGKGGATVKAVMEQSGAWVQLSQK-PEGINLQERVVTVSGEPEQVHKAVSAIVQKV---- 200
IGKGG +K++ +QSGA V+L + P + R T+ G P+Q+ A I +KV
Sbjct: 370 IGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVPQQIEVARQLIDEKVGGTN 429
Query: 201 ----------------------QEDPQSSSCLNISYANVAGPVANSNPTGSPYASP 234
P+SS C + N+A V N NP +P + P
Sbjct: 430 LGAPGAFGQSPFSQPPAPPHQNTFPPRSSGC----FPNMAAKV-NGNPHSTPVSGP 480
Score = 60.1 bits (144), Expect = 5e-09
Identities = 58/246 (23%), Positives = 101/246 (41%), Gaps = 24/246 (9%)
Query: 3 PEAPDSRKRPLETPPEVVCTKRSNTG-----EEGEYFLKVLIPSYAAGSIIGKGGQTIVQ 57
PE+ + KR L ++V R+ G + ++LIP+ G +IG+GG+TI Q
Sbjct: 131 PESIEQAKRLLG---QIVDRCRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQ 187
Query: 58 LQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVN 117
LQ+ TG + + + P ++ + G A + + E +RE QA + +
Sbjct: 188 LQERTGVKMVMIQDGPL-PTGADKPLRITGDAFKVQQAREMVLEIIREKDQADFRGVRGD 246
Query: 118 ILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQE 177
+ M ++ VP G++IG+ G +K + +G +Q KP+ E
Sbjct: 247 F---NSRMG---GGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF--KPDDGISPE 298
Query: 178 RVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSP------- 230
R V G P++ A I + + + ++ A G G+P
Sbjct: 299 RAAQVMGPPDRCQHAAHIISELILTAQERDGFGGLAAARGRGRGRGDWSVGAPGGVQEIT 358
Query: 231 YASPAD 236
Y PAD
Sbjct: 359 YTVPAD 364
Score = 58.9 bits (141), Expect = 1e-08
Identities = 76/373 (20%), Positives = 128/373 (34%), Gaps = 63/373 (16%)
Query: 137 VPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKA---V 193
VP+ G IIG+GG + + +SG +Q++ + GI ER ++G PE + +A +
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGI--PERPCVLTGTPESIEQAKRLL 141
Query: 194 SAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASGLL 253
IV + + P + ++ SN T PA + L
Sbjct: 142 GQIVDRCRNGPGFHNDID------------SNSTIQEILIPASKVGLVIGRGGETIKQLQ 189
Query: 254 GPAGLAGVGAFPAALPAFSGTDLLAISTALNTLASY-------------------GYNTN 294
G+ V LP + L A + G +
Sbjct: 190 ERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMVLEIIREKDQADFRGVRGDFNS 249
Query: 295 SLGLGLNSAAASGVLAAVAAGANPAAAAA----ANLLASYAGEAGAGPAGGAAPPPPPPP 350
+G G + + G N A + + + G P A PP
Sbjct: 250 RMGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDR 309
Query: 351 GALGSFAL------AAAANGYLGAGAGGGAGGGGGPLVAAAAAAGAAGGFLTAEKLAAES 404
+ + A +G+ G A G G G G + GA GG
Sbjct: 310 CQHAAHIISELILTAQERDGFGGLAAARGRGRGRGDW-----SVGAPGGV---------- 354
Query: 405 AKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPA 464
+ + VP + G ++GKGG+ + + +GA +++ + RR TI G P
Sbjct: 355 --QEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVPQ 412
Query: 465 ATQAAQYLISQRV 477
+ A+ LI ++V
Sbjct: 413 QIEVARQLIDEKV 425
Score = 45.8 bits (107), Expect = 9e-05
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 410 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 469
E VP+ +VG I+G+GG+ + Q +G +IQI+ + +P R +TG+P + + A
Sbjct: 81 EFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP---ERPCVLTGTPESIEQA 137
Query: 470 QYLISQRV 477
+ L+ Q V
Sbjct: 138 KRLLGQIV 145
Score = 44.7 bits (104), Expect = 2e-04
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 403 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 462
+S + EI +P + VG ++G+GG+T+ + QE TG ++ + + G LP ++ + ITG
Sbjct: 159 DSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGP-LPTGADKPLRITGD 217
Query: 463 PAATQAAQYLISQRVTYE-----QGVRASNPQKVG 492
Q A+ ++ + + + +GVR ++G
Sbjct: 218 AFKVQQAREMVLEIIREKDQADFRGVRGDFNSRMG 252
Score = 38.9 bits (89), Expect = 0.011
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 468
+E++VP VG ++G+ G+ + + Q G RIQ P R + G P Q
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP---ERAAQVMGPPDRCQH 312
Query: 469 AQYLISQRVTYEQ 481
A ++IS+ + Q
Sbjct: 313 AAHIISELILTAQ 325
>gi|64085377 insulin-like growth factor 2 mRNA binding protein 2
isoform a [Homo sapiens]
Length = 599
Score = 68.6 bits (166), Expect = 1e-11
Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 19/174 (10%)
Query: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
+ + IP+ A G+IIGK G I QL + GA+IK++ ++ P +ER+ ++ G EA
Sbjct: 430 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG--PDVSERMVIITGPPEAQFK 487
Query: 95 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVK 154
I K++E N P+ + +A + VP+STAG +IGKGG TV
Sbjct: 488 AQGRIFGKLKE----------ENFFNPKEEVK----LEAHIRVPSSTAGRVIGKGGKTVN 533
Query: 155 AVMEQSGAWVQLSQKPEGINLQERVVTVSGE---PEQVHKAVSAIVQKVQEDPQ 205
+ + A V + + +E +V + G + + + IVQ+V++ Q
Sbjct: 534 ELQNLTSAEVIVPRDQTPDENEEVIVRIIGHFFASQTAQRKIREIVQQVKQQEQ 587
Score = 60.8 bits (146), Expect = 3e-09
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
++ L++L+P+ G+IIGK G TI + K+T + + + + ++ G E+ + T E
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEG 250
Query: 92 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGA 151
+E R I + M K L + + K++ N G +IGK G
Sbjct: 251 -------TSEACRMILEIMQKEADETKLAEEIPL--------KILAHNGLVGRLIGKEGR 295
Query: 152 TVKAVMEQSGAWVQLSQKPE-GINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCL 210
+K + ++G + +S + I ER +TV G E A I++K++E ++
Sbjct: 296 NLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACASAEIEIMKKLREAFENDMLA 355
Query: 211 NISYANVAGPVANSNPTG---------SPYASPADVLPAA 241
AN+ P N + G SP A P PAA
Sbjct: 356 VNQQANLI-PGLNLSALGIFSTGLSVLSPPAGPRGAPPAA 394
Score = 56.6 bits (135), Expect = 5e-08
Identities = 94/405 (23%), Positives = 148/405 (36%), Gaps = 55/405 (13%)
Query: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 193
+++VP G IIGK G T+K + +Q+ + V + +K E E+ VT+ PE +A
Sbjct: 197 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRK-ENSGAAEKPVTIHATPEGTSEAC 255
Query: 194 SAIVQKVQEDPQSSSCLN------ISYANVAGPVANS---------NPTGSPYA-SPADV 237
I++ +Q++ + +++ + G + + TG+ S
Sbjct: 256 RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQD 315
Query: 238 LPAAAAASAAAASGLLGPAGLAGVGAFPAALPAFSGTDLLAISTALNTLASYGYNTNSLG 297
L G + A + AF D+LA++ N + G N ++LG
Sbjct: 316 LSIYNPERTITVKGTVEACASAEIEIMKKLREAFEN-DMLAVNQQANLIP--GLNLSALG 372
Query: 298 LGLNSAAASGVLAAVAAGANPAAAAAANLLASYAGE-AGAGPAGGAAPPPP----PPPGA 352
+ + VL+ A AA + +++G + P P P P
Sbjct: 373 I---FSTGLSVLSPPAGPRGAPPAAPYHPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQEI 429
Query: 353 LGSFALAAAANGYLG------------AGAGGGAGGGGGPLV------------AAAAAA 388
+ F A +G AGA GP V A A
Sbjct: 430 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQ 489
Query: 389 GAAGGFLTAEKL--AAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKG 446
G G L E E K I VP + G ++GKGGKT+ E Q LT A + I +
Sbjct: 490 GRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRD 548
Query: 447 EFLPGTRNRRVTITGSPAATQAAQYLISQRVTYEQGVRASNPQKV 491
+ V I G A+Q AQ I + V + PQ V
Sbjct: 549 QTPDENEEVIVRIIGHFFASQTAQRKIREIVQQVKQQEQKYPQGV 593
Score = 46.6 bits (109), Expect = 5e-05
Identities = 28/88 (31%), Positives = 45/88 (51%)
Query: 18 EVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPG 77
E++ + T E LK+L + G +IGK G+ + +++ ETG I +S +D
Sbjct: 260 EIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIY 319
Query: 78 TTERVCLVQGTAEALNAVHSFIAEKVRE 105
ER V+GT EA + I +K+RE
Sbjct: 320 NPERTITVKGTVEACASAEIEIMKKLRE 347
Score = 38.5 bits (88), Expect = 0.014
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 26 NTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCL- 84
N EE + + +PS AG +IGKGG+T+ +LQ T A + + +D P E V +
Sbjct: 503 NPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV--PRDQTPDENEEVIVR 560
Query: 85 VQGTAEALNAVHSFIAEKVREIPQAMTK 112
+ G A I E V+++ Q K
Sbjct: 561 IIGHFFASQTAQRKIREIVQQVKQQEQK 588
Score = 38.1 bits (87), Expect = 0.018
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 468
+ I VP VGAI+GK G T+ + T +R+ I +K G + VTI +P T
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 253
Query: 469 AQYLI 473
A +I
Sbjct: 254 ACRMI 258
>gi|154355000 KH-type splicing regulatory protein [Homo sapiens]
Length = 711
Score = 66.2 bits (160), Expect = 6e-11
Identities = 109/481 (22%), Positives = 177/481 (36%), Gaps = 128/481 (26%)
Query: 8 SRKRPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIK 67
S+ P+ PP T+ EY +P G IIG+GG+ I ++Q+++G ++
Sbjct: 132 SQLGPIHPPPRTSMTE--------EY----RVPDGMVGLIIGRGGEQINKIQQDSGCKVQ 179
Query: 68 LSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKV---REIPQAMTKPEVVNILQPQTT 124
+S G ER + G E++ + + V R P N Q T
Sbjct: 180 ISPDSG---GLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNA-NGGQNGTV 235
Query: 125 MNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSG 184
++++P AGL+IGKGG T+K + E++G + L Q ++ + + G
Sbjct: 236 Q--------EIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIG 287
Query: 185 EPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAAA 244
+P +V +A ++ ++E Q G + N GS DV
Sbjct: 288 DPYKVQQACEMVMDILRERDQ-------------GGFGDRNEYGSRIGGGIDV------- 327
Query: 245 SAAAASGLLGPAGLAGVGAFPAALPAFSGTDLLAISTALNTLASYGYNTNSLGLGLNSAA 304
P VG + SG + I N G+ +
Sbjct: 328 ----------PVPRHSVG----VVIGRSGEMIKKIQ-------------NDAGVRIQFKQ 360
Query: 305 ASGV---LAAVAAGANPAAAAAANLLASYAGEAGAGPAGGAAPP--PPPPPGALGSFALA 359
G A G AA ++ +GP G PP P PPG
Sbjct: 361 DDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPG---PPGGPGMPPG-------- 409
Query: 360 AAANGYLGAGAGGGAGGGGGPLVAAAAAAGAAGGFLTAEKLAAESAKELVEIAVPENLVG 419
G G G G G G P GG +T ++P + G
Sbjct: 410 -------GRGRGRGQGNWGPP-----------GGEMT--------------FSIPTHKCG 437
Query: 420 AILGKGGKTLVEYQELTGARIQISKKGEFLP--GTRNRRV-TITGSPAATQAAQYLISQR 476
++G+GG+ + + TGA ++IS++ LP G N ++ I GSP A+ LI ++
Sbjct: 438 LVIGRGGENVKAINQQTGAFVEISRQ---LPPNGDPNFKLFIIRGSPQQIDHAKQLIEEK 494
Query: 477 V 477
+
Sbjct: 495 I 495
Score = 64.3 bits (155), Expect = 2e-10
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 18/213 (8%)
Query: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
+ V +P ++ G +IG+ G+ I ++Q + G I+ + P E++ + G +
Sbjct: 325 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP---EKIAHIMGPPDRCEH 381
Query: 95 VHSFIAEKVREIPQAMTKPEVVNILQP--------QTTMNPDRAKQAKLIVPNSTAGLII 146
I + ++ + P + P Q P + +P GL+I
Sbjct: 382 AARIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMT-FSIPTHKCGLVI 440
Query: 147 GKGGATVKAVMEQSGAWVQLS-QKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQ 205
G+GG VKA+ +Q+GA+V++S Q P + ++ + G P+Q+ A I +K+ E P
Sbjct: 441 GRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI-EGPL 499
Query: 206 SSSCLNISYANVAGPVANSNP----TGSPYASP 234
AGP+ NP G P A P
Sbjct: 500 CPVGPGPGGPGPAGPMGPFNPGPFNQGPPGAPP 532
Score = 62.4 bits (150), Expect = 9e-10
Identities = 57/205 (27%), Positives = 83/205 (40%), Gaps = 60/205 (29%)
Query: 332 GEAGAGPAGGAAPPPPPPPGALGSFALAAAANGYLGAGAGGGAG---GGGGPLVAAAAAA 388
G GAG AGG PPP PPGA G G G G+ GG GGGGP + A A
Sbjct: 19 GGGGAGGAGGG--PPPGPPGA-GDRGGGGPGGGGPGGGSAGGPSQPPGGGGPGIRKDAFA 75
Query: 389 GAA------------------------------------GGFLTAEKLAAES-------- 404
A G ++KLA++
Sbjct: 76 DAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDGDQPESKKLASQGDSISSQLG 135
Query: 405 -------AKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRV 457
E VP+ +VG I+G+GG+ + + Q+ +G ++QIS LP R V
Sbjct: 136 PIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP---ERSV 192
Query: 458 TITGSPAATQAAQYLISQRVTYEQG 482
++TG+P + Q A+ ++ V+ +G
Sbjct: 193 SLTGAPESVQKAKMMLDDIVSRGRG 217
Score = 39.3 bits (90), Expect = 0.008
Identities = 26/57 (45%), Positives = 27/57 (47%), Gaps = 10/57 (17%)
Query: 341 GAAPPPPPPPGALGSFALAAAAN---GYLGAG-AGGGAGGGGGPLVAAAAAAGAAGG 393
G PP PPPP G A A G GAG GGG GGGGP G+AGG
Sbjct: 7 GGPPPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGP------GGGSAGG 57
Score = 32.7 bits (73), Expect = 0.77
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVT-ITGSPAATQ 467
+++ VP + VG ++G+ G+ + + Q G RIQ + GT ++ I G P +
Sbjct: 325 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQD----DGTGPEKIAHIMGPPDRCE 380
Query: 468 AAQYLISQRVTYEQGVRASNPQKVG 492
A +I+ + Q +R+ P G
Sbjct: 381 HAARIINDLL---QSLRSGPPGPPG 402
>gi|30795212 insulin-like growth factor 2 mRNA binding protein 3
[Homo sapiens]
Length = 579
Score = 61.6 bits (148), Expect = 2e-09
Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 19/200 (9%)
Query: 12 PLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 71
P PP + + + + IP+ + G+IIGK GQ I QL + GA+IK++ +
Sbjct: 385 PTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPA 444
Query: 72 KDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK 131
+ P R+ ++ G EA I K++E K EV
Sbjct: 445 E--APDAKVRMVIITGPPEAQFKAQGRIYGKIKEENFVSPKEEV--------------KL 488
Query: 132 QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGE---PEQ 188
+A + VP+ AG +IGKGG TV + S A V + + + VV ++G +
Sbjct: 489 EAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPDENDQVVVKITGHFYACQV 548
Query: 189 VHKAVSAIVQKVQEDPQSSS 208
+ + I+ +V++ Q +
Sbjct: 549 AQRKIQEILTQVKQHQQQKA 568
Score = 59.7 bits (143), Expect = 6e-09
Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 18/169 (10%)
Query: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
L++L+P+ G+IIGK G TI + K+T + I + + ++ G E+ + T E +A
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKSITILSTPEGTSA 255
Query: 95 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVK 154
I E + + Q + E + + K++ N+ G +IGK G +K
Sbjct: 256 ACKSILEIMHKEAQDIKFTEEIPL---------------KILAHNNFVGRLIGKEGRNLK 300
Query: 155 AVMEQSGAWVQLSQKPE-GINLQERVVTVSGEPEQVHKAVSAIVQKVQE 202
+ + + + +S E + ER +TV G E KA I++K++E
Sbjct: 301 KIEQDTDTKITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRE 349
Score = 42.0 bits (97), Expect = 0.001
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 379 GPLVAAAAAAGAAGGFLTAEKLAA--ESAKELVEIAVPENLVGAILGKGGKTLVEYQELT 436
GP A A G G + E + E K I VP G ++GKGGKT+ E Q L+
Sbjct: 458 GPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLS 517
Query: 437 GARIQISKKGEFLPGTRNRRVT-ITGSPAATQAAQYLISQRVT 478
A + + + + P ++ V ITG A Q AQ I + +T
Sbjct: 518 SAEVVVPR--DQTPDENDQVVVKITGHFYACQVAQRKIQEILT 558
Score = 41.6 bits (96), Expect = 0.002
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 403 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 462
+S E V + +P VGAI+GK G+ + + GA I+I+ P + R V ITG
Sbjct: 402 QSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAE--APDAKVRMVIITGP 459
Query: 463 PAATQAAQYLISQRVTYEQGVRASNPQKV 491
P A AQ I ++ E V K+
Sbjct: 460 PEAQFKAQGRIYGKIKEENFVSPKEEVKL 488
Score = 38.5 bits (88), Expect = 0.014
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 17/120 (14%)
Query: 4 EAPDSRKRP--LETPPEVVCTKRS------------NTGEEGEYFLKVLIPSYAAGSIIG 49
EAPD++ R + PPE + + EE + + +PS+AAG +IG
Sbjct: 445 EAPDAKVRMVIITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIG 504
Query: 50 KGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCL-VQGTAEALNAVHSFIAEKVREIPQ 108
KGG+T+ +LQ + A + + +D P ++V + + G A I E + ++ Q
Sbjct: 505 KGGKTVNELQNLSSAEVVV--PRDQTPDENDQVVVKITGHFYACQVAQRKIQEILTQVKQ 562
Score = 38.1 bits (87), Expect = 0.018
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 468
+ + VP VGAI+GK G T+ + T ++I + +K G + +TI +P T A
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKSITILSTPEGTSA 255
Query: 469 A 469
A
Sbjct: 256 A 256
Score = 36.6 bits (83), Expect = 0.053
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 468
++I N VG ++GK G+ L + ++ T +I IS E R +T+ G+
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGNVETCAK 338
Query: 469 AQYLISQRV--TYEQGVRASNPQ 489
A+ I +++ +YE + + N Q
Sbjct: 339 AEEEIMKKIRESYENDIASMNLQ 361
>gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform b [Homo sapiens]
Length = 373
Score = 61.2 bits (147), Expect = 2e-09
Identities = 72/247 (29%), Positives = 104/247 (42%), Gaps = 43/247 (17%)
Query: 198 QKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASGLLGPAG 257
+ V+ D S C + +AG +S P +P +S V P+ + ++ + SG A
Sbjct: 35 EPVETDRIISQCGRL----IAGGSLSSTPMSTPCSS---VPPSPSFSAPSPGSGSEQKAH 87
Query: 258 LAG---VGAFPAALP----AFSGTDLLAISTALNTLASYGYNTNSLGLGLNSAAASGVLA 310
L + +P L FS D + + + G++ + G +AAA
Sbjct: 88 LEDYYWMTGYPQQLNPEALGFSPEDAVEALISNSHQLQGGFDGYARGAQQLAAAAGAGAG 147
Query: 311 AVAAGAN----PAAAAAANLLASYAGEAGAGP---------AGGAAPPPPPPPGALGSFA 357
A G+ PAAA + ++A+ A ++GAGP AG P PGA GS A
Sbjct: 148 ASLGGSGEEMGPAAAVVSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHPTAGAPGAAGSAA 207
Query: 358 LAAAANGYLGAGA-----GGGAGGGGGPLVAAAAAAG------AAGGF-----LTAEKLA 401
+A G G G GGG GGGGG AA A G AAGG + E+L
Sbjct: 208 ASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGGLHFDDRFSDEQLV 267
Query: 402 AESAKEL 408
S +EL
Sbjct: 268 TMSVREL 274
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.128 0.355
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,024,631
Number of Sequences: 37866
Number of extensions: 1173801
Number of successful extensions: 26005
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 716
Number of HSP's that attempted gapping in prelim test: 13240
Number of HSP's gapped (non-prelim): 7357
length of query: 492
length of database: 18,247,518
effective HSP length: 106
effective length of query: 386
effective length of database: 14,233,722
effective search space: 5494216692
effective search space used: 5494216692
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.