Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 5902148
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5902148 uroplakin 1A [Homo sapiens]
(258 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5902148 uroplakin 1A [Homo sapiens] 538 e-153
gi|49619237 uroplakin 1B [Homo sapiens] 212 3e-55
gi|42476204 tetraspanin 18 isoform 2 [Homo sapiens] 91 8e-19
gi|72534746 tetraspanin 18 isoform 1 [Homo sapiens] 87 1e-17
gi|21264578 tetraspan 1 [Homo sapiens] 64 1e-10
gi|5729941 tetraspanin 9 [Homo sapiens] 59 3e-09
gi|68800005 tetraspanin 4 isoform a [Homo sapiens] 58 7e-09
gi|4507543 tetraspanin 4 isoform a [Homo sapiens] 58 7e-09
gi|68800018 tetraspanin 4 isoform a [Homo sapiens] 58 7e-09
gi|68800024 tetraspanin 4 isoform a [Homo sapiens] 58 7e-09
gi|68800011 tetraspanin 4 isoform a [Homo sapiens] 58 7e-09
gi|68799997 tetraspanin 4 isoform a [Homo sapiens] 58 7e-09
gi|122937466 tetraspanin 11 [Homo sapiens] 57 2e-08
gi|87159824 CD151 antigen [Homo sapiens] 53 2e-07
gi|87159822 CD151 antigen [Homo sapiens] 53 2e-07
gi|21237751 CD151 antigen [Homo sapiens] 53 2e-07
gi|21237748 CD151 antigen [Homo sapiens] 53 2e-07
gi|5032201 transmembrane 4 superfamily member 8 isoform 1 [Homo ... 52 5e-07
gi|91199546 CD63 antigen isoform B [Homo sapiens] 50 2e-06
gi|4502679 CD63 antigen isoform A [Homo sapiens] 50 2e-06
gi|68800032 tetraspanin 4 isoform b [Homo sapiens] 49 6e-06
gi|4502693 CD9 antigen [Homo sapiens] 47 2e-05
gi|4504813 CD82 antigen isoform 1 [Homo sapiens] 46 3e-05
gi|50511934 transmembrane 4 superfamily member 17 isoform b [Hom... 44 2e-04
gi|54859560 transmembrane 4 superfamily member 17 isoform a [Hom... 44 2e-04
gi|54859505 transmembrane 4 superfamily member 17 isoform c [Hom... 44 2e-04
gi|4502663 CD37 antigen isoform A [Homo sapiens] 42 7e-04
gi|190194420 tetraspanin 14 isoform 1 [Homo sapiens] 41 0.001
gi|4507541 transmembrane 4 superfamily member 6 [Homo sapiens] 41 0.001
gi|6912528 transmembrane 4 superfamily member 12 [Homo sapiens] 39 0.003
>gi|5902148 uroplakin 1A [Homo sapiens]
Length = 258
Score = 538 bits (1385), Expect = e-153
Identities = 258/258 (100%), Positives = 258/258 (100%)
Query: 1 MASAAAAEAEKGSPVVVGLLVVGNIIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDDV 60
MASAAAAEAEKGSPVVVGLLVVGNIIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDDV
Sbjct: 1 MASAAAAEAEKGSPVVVGLLVVGNIIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDDV 60
Query: 61 FAGAWIAIFCGFSFFMVASFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDY 120
FAGAWIAIFCGFSFFMVASFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDY
Sbjct: 61 FAGAWIAIFCGFSFFMVASFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDY 120
Query: 121 MVSNPSLITKQMLTFYSADTDQGQELTRLWDRVMIEQECCGTSGPMDWVNFTSAFRAATP 180
MVSNPSLITKQMLTFYSADTDQGQELTRLWDRVMIEQECCGTSGPMDWVNFTSAFRAATP
Sbjct: 121 MVSNPSLITKQMLTFYSADTDQGQELTRLWDRVMIEQECCGTSGPMDWVNFTSAFRAATP 180
Query: 181 EVVFPWPPLCCRRTGNFIPLNEEGCRLGHMDYLFTKGCFEHIGHAIDSYTWGISWFGFAI 240
EVVFPWPPLCCRRTGNFIPLNEEGCRLGHMDYLFTKGCFEHIGHAIDSYTWGISWFGFAI
Sbjct: 181 EVVFPWPPLCCRRTGNFIPLNEEGCRLGHMDYLFTKGCFEHIGHAIDSYTWGISWFGFAI 240
Query: 241 LMWTLPVMLIAMYFYTML 258
LMWTLPVMLIAMYFYTML
Sbjct: 241 LMWTLPVMLIAMYFYTML 258
>gi|49619237 uroplakin 1B [Homo sapiens]
Length = 260
Score = 212 bits (539), Expect = 3e-55
Identities = 98/248 (39%), Positives = 148/248 (59%), Gaps = 9/248 (3%)
Query: 18 GLLVVGNIIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDDVFAGAWIAIFCGFSFFMV 77
GLL+ GN+II G++L AE I+ +DQ+ +YPL+ + DD++ AWI IF G F +
Sbjct: 13 GLLIFGNVIIGCCGIALTAECIFFVSDQHSLYPLLEATDNDDIYGAAWIGIFVGICLFCL 72
Query: 78 ASFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTFYS 137
+ G+ + R ++L Y +LM IVY FE ASCIT+ T +D+ P+L KQML Y
Sbjct: 73 SVLGIVGIMKSSRKILLAYFILMFIVYAFEVASCITAATQQDFFT--PNLFLKQMLERYQ 130
Query: 138 ADTDQGQE-------LTRLWDRVMIEQECCGTSGPMDWVNFTSAFRAATPEVVFPWPPLC 190
++ + +T+ WDR+M++ CCG +GP DW +TSAFR + +PWP C
Sbjct: 131 NNSPPNNDDQWKNNGVTKTWDRLMLQDNCCGVNGPSDWQKYTSAFRTENNDADYPWPRQC 190
Query: 191 CRRTGNFIPLNEEGCRLGHMDYLFTKGCFEHIGHAIDSYTWGISWFGFAILMWTLPVMLI 250
C PLN E C+LG + +GC+E I ++ + WG++WFGFAIL WT V+L
Sbjct: 191 CVMNNLKEPLNLEACKLGVPGFYHNQGCYELISGPMNRHAWGVAWFGFAILCWTFWVLLG 250
Query: 251 AMYFYTML 258
M++++ +
Sbjct: 251 TMFYWSRI 258
>gi|42476204 tetraspanin 18 isoform 2 [Homo sapiens]
Length = 248
Score = 91.3 bits (225), Expect = 8e-19
Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 10/240 (4%)
Query: 19 LLVVGNIIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDDVFAGAWIAIFCGFSFFMVA 78
L+ V N I L G L A IWV D + V+ + GA+I + G F++
Sbjct: 12 LMFVFNFFIFLGGACLLAIGIWVMVDPTGFREI--VAANPLLLTGAYILLAMGGLLFLLG 69
Query: 79 SFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSA 138
G A+ + ++L + + +LI+++ E ++ I ++ R+ + TK++ Y
Sbjct: 70 FLGCCGAVRENKCLLLFFFLFILIIFLAELSAAILAFIFRENLTR--EFFTKELTKHYQG 127
Query: 139 DTDQGQELTRLWDRVMIEQECCGTSGPMDWVNFTSAFRAATPEVVFPWPPLCCRR---TG 195
+ D + W+ VMI CCG +GP D+ F S FR T + P CCRR +
Sbjct: 128 NNDT-DIFSATWNSVMITFGCCGVNGPEDF-KFASVFRLLTLDSE-EVPEACCRREPQSR 184
Query: 196 NFIPLNEEGCRLGHMDYLFTKGCFEHIGHAIDSYTWGISWFGFAILMWTLPVMLIAMYFY 255
+ + L+ E C LG +L +GC+ I + ++Y + +L L M+ AM +
Sbjct: 185 DGVLLSREECLLGRSLFLNKQGCYTVILNTFETYVYLAGALAIGVLAIELFAMIFAMCLF 244
>gi|72534746 tetraspanin 18 isoform 1 [Homo sapiens]
Length = 267
Score = 87.4 bits (215), Expect = 1e-17
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 10/216 (4%)
Query: 19 LLVVGNIIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDDVFAGAWIAIFCGFSFFMVA 78
L+ V N I L G L A IWV D + V+ + GA+I + G F++
Sbjct: 12 LMFVFNFFIFLGGACLLAIGIWVMVDPTGFREI--VAANPLLLTGAYILLAMGGLLFLLG 69
Query: 79 SFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSA 138
G A+ + ++L + + +LI+++ E ++ I ++ R+ + TK++ Y
Sbjct: 70 FLGCCGAVRENKCLLLFFFLFILIIFLAELSAAILAFIFRENLTR--EFFTKELTKHYQG 127
Query: 139 DTDQGQELTRLWDRVMIEQECCGTSGPMDWVNFTSAFRAATPEVVFPWPPLCCRR---TG 195
+ D + W+ VMI CCG +GP D+ F S FR T + P CCRR +
Sbjct: 128 NNDT-DVFSATWNSVMITFGCCGVNGPEDF-KFASVFRLLTLDSE-EVPEACCRREPQSR 184
Query: 196 NFIPLNEEGCRLGHMDYLFTKGCFEHIGHAIDSYTW 231
+ + L+ E C LG +L +GC+ I + ++Y +
Sbjct: 185 DGVLLSREECLLGRSLFLNKQGCYTVILNTFETYVY 220
>gi|21264578 tetraspan 1 [Homo sapiens]
Length = 241
Score = 64.3 bits (155), Expect = 1e-10
Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 15/243 (6%)
Query: 19 LLVVGNIIILLSGLSLFAETIWVTADQ---YRVYPLMGVSGKDDVFAGAWIAIFCGFSFF 75
++++ N++I L G +L A IWV+ D +++ + S V G ++ I G F
Sbjct: 10 MMILFNLLIFLCGAALLAVGIWVSIDGASFLKIFGPLSSSAMQFVNVGYFL-IAAGVVVF 68
Query: 76 MVASFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTF 135
+ G A + ++T+ ++L+++I E A+ + + Y +T ++
Sbjct: 69 ALGFLGCYGAKTESKCALVTFFFILLLIFIAEVAAAVVALV---YTTMAEHFLTLLVVPA 125
Query: 136 YSADTDQGQELTRLWDRVMIEQECCGTSGPMDWVNFTSAFRAATPEVVFPWPPLCCRRTG 195
D ++ T++W+ M +CCG + N+T + + +PP CC
Sbjct: 126 IKKDYGSQEDFTQVWNTTMKGLKCCG------FTNYTDFEDSPYFKENSAFPPFCC--ND 177
Query: 196 NFIPLNEEGCRLGHMDYLFTKGCFEHIGHAIDSYTWGISWFGFAILMWTLPVMLIAMYFY 255
N E C +GCF + + I + + I L M+++MY Y
Sbjct: 178 NVTNTANETCTKQKAHDQKVEGCFNQLLYDIRTNAVTVGGVAAGIGGLELAAMIVSMYLY 237
Query: 256 TML 258
L
Sbjct: 238 CNL 240
>gi|5729941 tetraspanin 9 [Homo sapiens]
Length = 239
Score = 59.3 bits (142), Expect = 3e-09
Identities = 48/237 (20%), Positives = 87/237 (36%), Gaps = 21/237 (8%)
Query: 19 LLVVGNIIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDDVFAGAWIAIFCGFSFFMVA 78
++ + N+I L G L IW++ Q S + A + I G +
Sbjct: 12 MMFLFNLIFWLCGCGLLGVGIWLSVSQGNFATF---SPSFPSLSAANLVIAIGTIVMVTG 68
Query: 79 SFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSA 138
G A+ + ++L++ +++L++ + E I + + D + N K+ L Y
Sbjct: 69 FLGCLGAIKENKCLLLSFFIVLLVILLAELILLILFFVYMDKVNENAKKDLKEGLLLYHT 128
Query: 139 DTDQGQELTRLWDRVMIEQECCGTSGPMDWVNFTSAFRAATPEVVFPWPPLCCRRTGNFI 198
+ + G L W+ + E CCG + DW P CC
Sbjct: 129 ENNVG--LKNAWNIIQAEMRCCGVTDYTDWYPVLGENTV---------PDRCCME----- 172
Query: 199 PLNEEGCRLGHMDYLFTKGCFEHIGHAIDSYTWGISWFGFAILMWTLPVMLIAMYFY 255
N +GC L+ GC+E + D + G IL+ + M +M +
Sbjct: 173 --NSQGCGRNATTPLWRTGCYEKVKMWFDDNKHVLGTVGMCILIMQILGMAFSMTLF 227
>gi|68800005 tetraspanin 4 isoform a [Homo sapiens]
Length = 238
Score = 58.2 bits (139), Expect = 7e-09
Identities = 51/237 (21%), Positives = 85/237 (35%), Gaps = 21/237 (8%)
Query: 19 LLVVGNIIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDDVFAGAWIAIFCGFSFFMVA 78
L+ N++ L G + IW+ A Q L S + A + I G +
Sbjct: 12 LMFAFNLLFWLGGCGVLGVGIWLAATQGSFATL---SSSFPSLSAANLLIITGAFVMAIG 68
Query: 79 SFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSA 138
G A+ + ++LT+ +L+L+V++ E I + + D + K+ L Y
Sbjct: 69 FVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLKKGLHLYGT 128
Query: 139 DTDQGQELTRLWDRVMIEQECCGTSGPMDWVNFTSAFRAATPEVVFPWPPLCCRRTGNFI 198
+ G LT W + + CCG S DW +A R P CC
Sbjct: 129 QGNVG--LTNAWSIIQTDFRCCGVSNYTDWFEVYNATRV---------PDSCCLEF---- 173
Query: 199 PLNEEGCRLGHMDYLFTKGCFEHIGHAIDSYTWGISWFGFAILMWTLPVMLIAMYFY 255
E C L + C+E + + + FG + + + AM Y
Sbjct: 174 ---SESCGLHAPGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAMTMY 227
>gi|4507543 tetraspanin 4 isoform a [Homo sapiens]
Length = 238
Score = 58.2 bits (139), Expect = 7e-09
Identities = 51/237 (21%), Positives = 85/237 (35%), Gaps = 21/237 (8%)
Query: 19 LLVVGNIIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDDVFAGAWIAIFCGFSFFMVA 78
L+ N++ L G + IW+ A Q L S + A + I G +
Sbjct: 12 LMFAFNLLFWLGGCGVLGVGIWLAATQGSFATL---SSSFPSLSAANLLIITGAFVMAIG 68
Query: 79 SFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSA 138
G A+ + ++LT+ +L+L+V++ E I + + D + K+ L Y
Sbjct: 69 FVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLKKGLHLYGT 128
Query: 139 DTDQGQELTRLWDRVMIEQECCGTSGPMDWVNFTSAFRAATPEVVFPWPPLCCRRTGNFI 198
+ G LT W + + CCG S DW +A R P CC
Sbjct: 129 QGNVG--LTNAWSIIQTDFRCCGVSNYTDWFEVYNATRV---------PDSCCLEF---- 173
Query: 199 PLNEEGCRLGHMDYLFTKGCFEHIGHAIDSYTWGISWFGFAILMWTLPVMLIAMYFY 255
E C L + C+E + + + FG + + + AM Y
Sbjct: 174 ---SESCGLHAPGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAMTMY 227
>gi|68800018 tetraspanin 4 isoform a [Homo sapiens]
Length = 238
Score = 58.2 bits (139), Expect = 7e-09
Identities = 51/237 (21%), Positives = 85/237 (35%), Gaps = 21/237 (8%)
Query: 19 LLVVGNIIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDDVFAGAWIAIFCGFSFFMVA 78
L+ N++ L G + IW+ A Q L S + A + I G +
Sbjct: 12 LMFAFNLLFWLGGCGVLGVGIWLAATQGSFATL---SSSFPSLSAANLLIITGAFVMAIG 68
Query: 79 SFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSA 138
G A+ + ++LT+ +L+L+V++ E I + + D + K+ L Y
Sbjct: 69 FVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLKKGLHLYGT 128
Query: 139 DTDQGQELTRLWDRVMIEQECCGTSGPMDWVNFTSAFRAATPEVVFPWPPLCCRRTGNFI 198
+ G LT W + + CCG S DW +A R P CC
Sbjct: 129 QGNVG--LTNAWSIIQTDFRCCGVSNYTDWFEVYNATRV---------PDSCCLEF---- 173
Query: 199 PLNEEGCRLGHMDYLFTKGCFEHIGHAIDSYTWGISWFGFAILMWTLPVMLIAMYFY 255
E C L + C+E + + + FG + + + AM Y
Sbjct: 174 ---SESCGLHAPGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAMTMY 227
>gi|68800024 tetraspanin 4 isoform a [Homo sapiens]
Length = 238
Score = 58.2 bits (139), Expect = 7e-09
Identities = 51/237 (21%), Positives = 85/237 (35%), Gaps = 21/237 (8%)
Query: 19 LLVVGNIIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDDVFAGAWIAIFCGFSFFMVA 78
L+ N++ L G + IW+ A Q L S + A + I G +
Sbjct: 12 LMFAFNLLFWLGGCGVLGVGIWLAATQGSFATL---SSSFPSLSAANLLIITGAFVMAIG 68
Query: 79 SFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSA 138
G A+ + ++LT+ +L+L+V++ E I + + D + K+ L Y
Sbjct: 69 FVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLKKGLHLYGT 128
Query: 139 DTDQGQELTRLWDRVMIEQECCGTSGPMDWVNFTSAFRAATPEVVFPWPPLCCRRTGNFI 198
+ G LT W + + CCG S DW +A R P CC
Sbjct: 129 QGNVG--LTNAWSIIQTDFRCCGVSNYTDWFEVYNATRV---------PDSCCLEF---- 173
Query: 199 PLNEEGCRLGHMDYLFTKGCFEHIGHAIDSYTWGISWFGFAILMWTLPVMLIAMYFY 255
E C L + C+E + + + FG + + + AM Y
Sbjct: 174 ---SESCGLHAPGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAMTMY 227
>gi|68800011 tetraspanin 4 isoform a [Homo sapiens]
Length = 238
Score = 58.2 bits (139), Expect = 7e-09
Identities = 51/237 (21%), Positives = 85/237 (35%), Gaps = 21/237 (8%)
Query: 19 LLVVGNIIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDDVFAGAWIAIFCGFSFFMVA 78
L+ N++ L G + IW+ A Q L S + A + I G +
Sbjct: 12 LMFAFNLLFWLGGCGVLGVGIWLAATQGSFATL---SSSFPSLSAANLLIITGAFVMAIG 68
Query: 79 SFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSA 138
G A+ + ++LT+ +L+L+V++ E I + + D + K+ L Y
Sbjct: 69 FVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLKKGLHLYGT 128
Query: 139 DTDQGQELTRLWDRVMIEQECCGTSGPMDWVNFTSAFRAATPEVVFPWPPLCCRRTGNFI 198
+ G LT W + + CCG S DW +A R P CC
Sbjct: 129 QGNVG--LTNAWSIIQTDFRCCGVSNYTDWFEVYNATRV---------PDSCCLEF---- 173
Query: 199 PLNEEGCRLGHMDYLFTKGCFEHIGHAIDSYTWGISWFGFAILMWTLPVMLIAMYFY 255
E C L + C+E + + + FG + + + AM Y
Sbjct: 174 ---SESCGLHAPGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAMTMY 227
>gi|68799997 tetraspanin 4 isoform a [Homo sapiens]
Length = 238
Score = 58.2 bits (139), Expect = 7e-09
Identities = 51/237 (21%), Positives = 85/237 (35%), Gaps = 21/237 (8%)
Query: 19 LLVVGNIIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDDVFAGAWIAIFCGFSFFMVA 78
L+ N++ L G + IW+ A Q L S + A + I G +
Sbjct: 12 LMFAFNLLFWLGGCGVLGVGIWLAATQGSFATL---SSSFPSLSAANLLIITGAFVMAIG 68
Query: 79 SFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSA 138
G A+ + ++LT+ +L+L+V++ E I + + D + K+ L Y
Sbjct: 69 FVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLKKGLHLYGT 128
Query: 139 DTDQGQELTRLWDRVMIEQECCGTSGPMDWVNFTSAFRAATPEVVFPWPPLCCRRTGNFI 198
+ G LT W + + CCG S DW +A R P CC
Sbjct: 129 QGNVG--LTNAWSIIQTDFRCCGVSNYTDWFEVYNATRV---------PDSCCLEF---- 173
Query: 199 PLNEEGCRLGHMDYLFTKGCFEHIGHAIDSYTWGISWFGFAILMWTLPVMLIAMYFY 255
E C L + C+E + + + FG + + + AM Y
Sbjct: 174 ---SESCGLHAPGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAMTMY 227
>gi|122937466 tetraspanin 11 [Homo sapiens]
Length = 253
Score = 56.6 bits (135), Expect = 2e-08
Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 16/179 (8%)
Query: 19 LLVVGNIIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDDVFAGAWIAIFCGFSFFMVA 78
LL V N + G ++ A IW ++ + V A A+I IF G +
Sbjct: 19 LLFVFNFFFWVGGAAVLAVGIWTLVEKSGY---LSVLASSTFAASAYILIFAGVLVMVTG 75
Query: 79 SFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSA 138
G GA L R+ + TY L+L++++ E + + ++ + + KQ L A
Sbjct: 76 FLGFGAILWERKGCLSTYFCLLLVIFLVELVAGVLAHVYYQRLSDE----LKQHLNRTLA 131
Query: 139 DTDQGQ----ELTRLWDRVMIEQECCGTSGPMDWVNFT-SAFRAATPEVVFPWPPLCCR 192
+ + GQ ++T DR+ + +CCG++ DW + T R A V P CC+
Sbjct: 132 E-NYGQPGATQITASVDRLQQDFKCCGSNSSADWQHSTYILLREAEGRQV---PDSCCK 186
>gi|87159824 CD151 antigen [Homo sapiens]
Length = 253
Score = 53.1 bits (126), Expect = 2e-07
Identities = 40/151 (26%), Positives = 64/151 (42%), Gaps = 6/151 (3%)
Query: 19 LLVVGNIIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDDVFAGAWIAIFCGFSFFMVA 78
LL N L+GL++ A IW A + L+ A A+I + G +
Sbjct: 19 LLFTYNCCFWLAGLAVMAVGIWTLALKSDYISLLA---SGTYLATAYILVVAGTVVMVTG 75
Query: 79 SFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSA 138
G A RR+++ Y +L+LI+++ E + I +Y + Y N L T
Sbjct: 76 VLGCCATFKERRNLLRLYFILLLIIFLLEIIAGILAYAY--YQQLNTELKENLKDTMTKR 133
Query: 139 DTDQGQE-LTRLWDRVMIEQECCGTSGPMDW 168
G E +T D++ E CCG++ DW
Sbjct: 134 YHQPGHEAVTSAVDQLQQEFHCCGSNNSQDW 164
>gi|87159822 CD151 antigen [Homo sapiens]
Length = 253
Score = 53.1 bits (126), Expect = 2e-07
Identities = 40/151 (26%), Positives = 64/151 (42%), Gaps = 6/151 (3%)
Query: 19 LLVVGNIIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDDVFAGAWIAIFCGFSFFMVA 78
LL N L+GL++ A IW A + L+ A A+I + G +
Sbjct: 19 LLFTYNCCFWLAGLAVMAVGIWTLALKSDYISLLA---SGTYLATAYILVVAGTVVMVTG 75
Query: 79 SFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSA 138
G A RR+++ Y +L+LI+++ E + I +Y + Y N L T
Sbjct: 76 VLGCCATFKERRNLLRLYFILLLIIFLLEIIAGILAYAY--YQQLNTELKENLKDTMTKR 133
Query: 139 DTDQGQE-LTRLWDRVMIEQECCGTSGPMDW 168
G E +T D++ E CCG++ DW
Sbjct: 134 YHQPGHEAVTSAVDQLQQEFHCCGSNNSQDW 164
>gi|21237751 CD151 antigen [Homo sapiens]
Length = 253
Score = 53.1 bits (126), Expect = 2e-07
Identities = 40/151 (26%), Positives = 64/151 (42%), Gaps = 6/151 (3%)
Query: 19 LLVVGNIIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDDVFAGAWIAIFCGFSFFMVA 78
LL N L+GL++ A IW A + L+ A A+I + G +
Sbjct: 19 LLFTYNCCFWLAGLAVMAVGIWTLALKSDYISLLA---SGTYLATAYILVVAGTVVMVTG 75
Query: 79 SFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSA 138
G A RR+++ Y +L+LI+++ E + I +Y + Y N L T
Sbjct: 76 VLGCCATFKERRNLLRLYFILLLIIFLLEIIAGILAYAY--YQQLNTELKENLKDTMTKR 133
Query: 139 DTDQGQE-LTRLWDRVMIEQECCGTSGPMDW 168
G E +T D++ E CCG++ DW
Sbjct: 134 YHQPGHEAVTSAVDQLQQEFHCCGSNNSQDW 164
>gi|21237748 CD151 antigen [Homo sapiens]
Length = 253
Score = 53.1 bits (126), Expect = 2e-07
Identities = 40/151 (26%), Positives = 64/151 (42%), Gaps = 6/151 (3%)
Query: 19 LLVVGNIIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDDVFAGAWIAIFCGFSFFMVA 78
LL N L+GL++ A IW A + L+ A A+I + G +
Sbjct: 19 LLFTYNCCFWLAGLAVMAVGIWTLALKSDYISLLA---SGTYLATAYILVVAGTVVMVTG 75
Query: 79 SFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSA 138
G A RR+++ Y +L+LI+++ E + I +Y + Y N L T
Sbjct: 76 VLGCCATFKERRNLLRLYFILLLIIFLLEIIAGILAYAY--YQQLNTELKENLKDTMTKR 133
Query: 139 DTDQGQE-LTRLWDRVMIEQECCGTSGPMDW 168
G E +T D++ E CCG++ DW
Sbjct: 134 YHQPGHEAVTSAVDQLQQEFHCCGSNNSQDW 164
>gi|5032201 transmembrane 4 superfamily member 8 isoform 1 [Homo
sapiens]
Length = 253
Score = 52.0 bits (123), Expect = 5e-07
Identities = 44/188 (23%), Positives = 75/188 (39%), Gaps = 11/188 (5%)
Query: 64 AWIAIFCGFSFFMVASFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVS 123
A + I G F++ G A + R + T+++++L+V++ E + Y +R + +
Sbjct: 54 AVVIIAVGALLFIIGLIGCCATIRESRCGLATFVIILLLVFVTEVVVVVLGYVYRAKVEN 113
Query: 124 NPSLITKQMLTFYSADTDQGQELTRLWDRVMIEQECCGTSGPMDWVNFTSAFRAATPEVV 183
+++ Y+ +R D V + CCG DW N T F+ + V
Sbjct: 114 EVDRSIQKVYKTYNGTNPDAA--SRAIDYVQRQLHCCGIHNYSDWEN-TDWFKETKNQSV 170
Query: 184 FPWPPLCCRRTGNFIPLNEEGCRLGHMDYLFTKGCFEHIGHAIDSYTWGISWFGFAILMW 243
P CCR T + N G L H L+ +GC + + + W A
Sbjct: 171 ---PLSCCRETAS----NCNG-SLAHPSDLYAEGCEALVVKKLQEIMMHVIWAALAFAAI 222
Query: 244 TLPVMLIA 251
L ML A
Sbjct: 223 QLLGMLCA 230
>gi|91199546 CD63 antigen isoform B [Homo sapiens]
Length = 236
Score = 50.1 bits (118), Expect = 2e-06
Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 4/140 (2%)
Query: 66 IAIFCGFSFFMVASFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNP 125
+ I G F+VA G A +++T+ + + ++ + E A+ I Y RD ++S
Sbjct: 56 VIIAVGVFLFLVAFVGCCGACKENYCLMITFAIFLSLIMLVEVAAAIAGYVFRDKVMSEF 115
Query: 126 SLITKQMLTFYSADTDQGQELTRLWDRVMIEQECCGTSGPMDWVNFTSAFRAATPEVVFP 185
+ +Q + Y + L DR+ + +CCG + DW S + P+
Sbjct: 116 NNNFRQQMENYPKNNHTASIL----DRMQADFKCCGAANYTDWEKIPSMSKNRVPDSCCI 171
Query: 186 WPPLCCRRTGNFIPLNEEGC 205
+ C N +++EGC
Sbjct: 172 NVTVGCGINFNEKAIHKEGC 191
>gi|4502679 CD63 antigen isoform A [Homo sapiens]
Length = 238
Score = 50.1 bits (118), Expect = 2e-06
Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 4/140 (2%)
Query: 66 IAIFCGFSFFMVASFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNP 125
+ I G F+VA G A +++T+ + + ++ + E A+ I Y RD ++S
Sbjct: 56 VIIAVGVFLFLVAFVGCCGACKENYCLMITFAIFLSLIMLVEVAAAIAGYVFRDKVMSEF 115
Query: 126 SLITKQMLTFYSADTDQGQELTRLWDRVMIEQECCGTSGPMDWVNFTSAFRAATPEVVFP 185
+ +Q + Y + L DR+ + +CCG + DW S + P+
Sbjct: 116 NNNFRQQMENYPKNNHTASIL----DRMQADFKCCGAANYTDWEKIPSMSKNRVPDSCCI 171
Query: 186 WPPLCCRRTGNFIPLNEEGC 205
+ C N +++EGC
Sbjct: 172 NVTVGCGINFNEKAIHKEGC 191
>gi|68800032 tetraspanin 4 isoform b [Homo sapiens]
Length = 174
Score = 48.5 bits (114), Expect = 6e-06
Identities = 38/175 (21%), Positives = 64/175 (36%), Gaps = 18/175 (10%)
Query: 81 GVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADT 140
G A+ + ++LT+ +L+L+V++ E I + + D + K+ L Y
Sbjct: 7 GCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLKKGLHLYGTQG 66
Query: 141 DQGQELTRLWDRVMIEQECCGTSGPMDWVNFTSAFRAATPEVVFPWPPLCCRRTGNFIPL 200
+ G LT W + + CCG S DW +A R P CC
Sbjct: 67 NVG--LTNAWSIIQTDFRCCGVSNYTDWFEVYNATRV---------PDSCCLEF------ 109
Query: 201 NEEGCRLGHMDYLFTKGCFEHIGHAIDSYTWGISWFGFAILMWTLPVMLIAMYFY 255
E C L + C+E + + + FG + + + AM Y
Sbjct: 110 -SESCGLHAPGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAMTMY 163
>gi|4502693 CD9 antigen [Homo sapiens]
Length = 228
Score = 46.6 bits (109), Expect = 2e-05
Identities = 32/160 (20%), Positives = 66/160 (41%), Gaps = 6/160 (3%)
Query: 11 KGSPVVVGLLVVG-NIIILLSGLSLFAETIWVTADQY--RVYPLMGVSGKDDVFAGAWIA 67
KG + L+ G N I L+G+++ A +W+ D ++ + + G +I
Sbjct: 4 KGGTKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSIFEQETNNNNSSFYTGVYIL 63
Query: 68 IFCGFSFFMVASFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSL 127
I G +V G A+ + M+ + +L+++ E A+ I Y+H+D ++
Sbjct: 64 IGAGALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAIWGYSHKDEVIKEVQE 123
Query: 128 ITKQMLTFYSADTDQGQELTRLWDRVMIEQECCGTSGPMD 167
K + +E + + CCG +G ++
Sbjct: 124 FYKDTYNKLKTKDEPQRETLK---AIHYALNCCGLAGGVE 160
>gi|4504813 CD82 antigen isoform 1 [Homo sapiens]
Length = 267
Score = 46.2 bits (108), Expect = 3e-05
Identities = 34/166 (20%), Positives = 70/166 (42%), Gaps = 5/166 (3%)
Query: 20 LVVGNIIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDDVFAGAWIAIFCGFSFFMVAS 79
L + N+I + G + +W+ AD+ ++ S + GA++ I G ++
Sbjct: 13 LFLFNLIFFILGAVILGFGVWILADKSSFISVLQTSSSS-LRMGAYVFIGVGAVTMLMGF 71
Query: 80 FGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSAD 139
G A+ R ++ Y +L++ I + + Y + + I +++ Y++
Sbjct: 72 LGCIGAVNEVRCLLGLYFAFLLLILIAQVTAGALFYFNMGKLKQEMGGIVTELIRDYNSS 131
Query: 140 TDQGQELTRLWDRVMIEQECCGTSGPMDWVNFTSAFRAATPEVVFP 185
+ L WD V + +CCG +W + +A PEV +P
Sbjct: 132 REDS--LQDAWDYVQAQVKCCGWVSFYNWTD--NAELMNRPEVTYP 173
>gi|50511934 transmembrane 4 superfamily member 17 isoform b [Homo
sapiens]
Length = 329
Score = 43.5 bits (101), Expect = 2e-04
Identities = 33/148 (22%), Positives = 59/148 (39%), Gaps = 11/148 (7%)
Query: 24 NIIILLSGLSLFAETIWVTADQ---YRVYPLMGVSGKDDVFAGAWIAIFCGFSFFMVASF 80
NI+ + G A +W ++ + L + G D V W+ + G ++
Sbjct: 25 NIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGGLDPV----WLFVVVGGVMSVLGFA 80
Query: 81 GVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADT 140
G AL ++ + V + +++ E A+ I ++ +D++ +L + Y D
Sbjct: 81 GCIGALRENTFLLKFFSVFLGLIFFLELATGILAFVFKDWIRDQLNLFINNNVKAYRDDI 140
Query: 141 DQGQELTRLWDRVMIEQECCGTSGPMDW 168
D L L D CCG GP DW
Sbjct: 141 D----LQNLIDFAQEYWSCCGARGPNDW 164
>gi|54859560 transmembrane 4 superfamily member 17 isoform a [Homo
sapiens]
Length = 332
Score = 43.5 bits (101), Expect = 2e-04
Identities = 33/148 (22%), Positives = 59/148 (39%), Gaps = 11/148 (7%)
Query: 24 NIIILLSGLSLFAETIWVTADQ---YRVYPLMGVSGKDDVFAGAWIAIFCGFSFFMVASF 80
NI+ + G A +W ++ + L + G D V W+ + G ++
Sbjct: 25 NIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGGLDPV----WLFVVVGGVMSVLGFA 80
Query: 81 GVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADT 140
G AL ++ + V + +++ E A+ I ++ +D++ +L + Y D
Sbjct: 81 GCIGALRENTFLLKFFSVFLGLIFFLELATGILAFVFKDWIRDQLNLFINNNVKAYRDDI 140
Query: 141 DQGQELTRLWDRVMIEQECCGTSGPMDW 168
D L L D CCG GP DW
Sbjct: 141 D----LQNLIDFAQEYWSCCGARGPNDW 164
>gi|54859505 transmembrane 4 superfamily member 17 isoform c [Homo
sapiens]
Length = 266
Score = 43.5 bits (101), Expect = 2e-04
Identities = 33/148 (22%), Positives = 59/148 (39%), Gaps = 11/148 (7%)
Query: 24 NIIILLSGLSLFAETIWVTADQ---YRVYPLMGVSGKDDVFAGAWIAIFCGFSFFMVASF 80
NI+ + G A +W ++ + L + G D V W+ + G ++
Sbjct: 25 NIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGGLDPV----WLFVVVGGVMSVLGFA 80
Query: 81 GVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADT 140
G AL ++ + V + +++ E A+ I ++ +D++ +L + Y D
Sbjct: 81 GCIGALRENTFLLKFFSVFLGLIFFLELATGILAFVFKDWIRDQLNLFINNNVKAYRDDI 140
Query: 141 DQGQELTRLWDRVMIEQECCGTSGPMDW 168
D L L D CCG GP DW
Sbjct: 141 D----LQNLIDFAQEYWSCCGARGPNDW 164
>gi|4502663 CD37 antigen isoform A [Homo sapiens]
Length = 281
Score = 41.6 bits (96), Expect = 7e-04
Identities = 32/149 (21%), Positives = 60/149 (40%), Gaps = 2/149 (1%)
Query: 20 LVVGNIIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDDVFAGAWIAIFCGFSFFMVAS 79
L V N+ + G +F IW+ D+ +G++ +AI G +A
Sbjct: 15 LFVFNLFFFVLGSLIFCFGIWILIDKTSFVSFVGLAFVPLQIWSKVLAI-SGIFTMGIAL 73
Query: 80 FGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSAD 139
G AL R ++ Y ++L+++ + I T R + + + ++ + Y +
Sbjct: 74 LGCVGALKELRCLLGLYFGMLLLLFATQITLGILISTQRAQLERSLRDVVEKTIQKYGTN 133
Query: 140 TDQGQELTRLWDRVMIEQECCGTSGPMDW 168
++ WD V + CCG P DW
Sbjct: 134 PEE-TAAEESWDYVQFQLRCCGWHYPQDW 161
>gi|190194420 tetraspanin 14 isoform 1 [Homo sapiens]
Length = 270
Score = 41.2 bits (95), Expect = 0.001
Identities = 34/153 (22%), Positives = 63/153 (41%), Gaps = 11/153 (7%)
Query: 19 LLVVGNIIILLSGLSLFAETIWVTADQYRVYPLMGVS---GKDDVFAGAWIAIFCGFSFF 75
LL NII L+G+ +W +++ + L V+ G D V + + G F
Sbjct: 18 LLFSYNIIFWLAGVVFLGVGLWAWSEKGVLSDLTKVTRMHGIDPVV----LVLMVGVVMF 73
Query: 76 MVASFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTF 135
+ G AL ++ + +++++ E A + ++ +D++ + +
Sbjct: 74 TLGFAGCVGALRENICLLNFFCGTIVLIFFLELAVAVLAFLFQDWVRDRFREFFESNIKS 133
Query: 136 YSADTDQGQELTRLWDRVMIEQECCGTSGPMDW 168
Y D D L L D + +CCG GP DW
Sbjct: 134 YRDDID----LQNLIDSLQKANQCCGAYGPEDW 162
>gi|4507541 transmembrane 4 superfamily member 6 [Homo sapiens]
Length = 245
Score = 41.2 bits (95), Expect = 0.001
Identities = 43/233 (18%), Positives = 90/233 (38%), Gaps = 22/233 (9%)
Query: 19 LLVVGNIIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDDVFAGAWIAIFCGFSFFMVA 78
+L++ I ++G+ L A IW + L+ + F + I G ++
Sbjct: 20 VLLIYTFIFWITGVILLAVGIWGKVSLENYFSLLNEKATNVPF----VLIATGTVIILLG 75
Query: 79 SFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSA 138
+FG A M+ Y + + +V++ E + I + R + ++ ++ L Y++
Sbjct: 76 TFGCFATCRASAWMLKLYAMFLTLVFLVELVAAIVGFVFRHEIKNSFKNNYEKALKQYNS 135
Query: 139 DTDQGQELTRLWDRVMIEQECCGTSGPMDWVNFTSAFRAATPEVVFPWPPLCCRRTGNFI 198
D D++ CCG + DW + T+ + +P CC+
Sbjct: 136 TGDYRSHAV---DKIQNTLHCCGVTDYRDWTD-TNYYSEK------GFPKSCCKL----- 180
Query: 199 PLNEEGCRLGHMDYLFTKGCFEHIGHAIDSYTWGISWFGFAILMWTLPVMLIA 251
E+ D + +GCF + I+S ++ F + + L + +A
Sbjct: 181 ---EDCTPQRDADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLA 230
>gi|6912528 transmembrane 4 superfamily member 12 [Homo sapiens]
Length = 305
Score = 39.3 bits (90), Expect = 0.003
Identities = 51/222 (22%), Positives = 84/222 (37%), Gaps = 41/222 (18%)
Query: 19 LLVVGNIIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDD--------VFAGAWIAIFC 70
LL N++ L +S+ A + W+ V L + ++ V IA+ C
Sbjct: 13 LLYALNLLFWLMSISVLAVSAWMRDYLNNVLTLTAETRVEEAVILTYFPVVHPVMIAVCC 72
Query: 71 GFSFFMVASFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITK 130
+V G + R ++ Y +L+++ E A + +Y ++ MV +
Sbjct: 73 --FLIIVGMLGYCGTVKRNLLLLAWYFGSLLVIFCVELACGVWTY-EQELMVP---VQWS 126
Query: 131 QMLTFYSADTDQG----QELTRLWDRVMIEQECCGTSGPMDWVNFTSAFRAATPEVVFPW 186
M+T + T+ G + LT W+ E +CCG DW+ T W
Sbjct: 127 DMVTLKARMTNYGLPRYRWLTHAWNFFQREFKCCGVVYFTDWLEMTE----------MDW 176
Query: 187 PP-LCCRR----------TGNFIPLNEEGCRLGHMDYLFTKG 217
PP CC R + L +EGC G Y F +G
Sbjct: 177 PPDSCCVREFPGCSKQAHQEDLSDLYQEGC--GKKMYSFLRG 216
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.329 0.140 0.467
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,609,627
Number of Sequences: 37866
Number of extensions: 397262
Number of successful extensions: 1134
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 1093
Number of HSP's gapped (non-prelim): 52
length of query: 258
length of database: 18,247,518
effective HSP length: 100
effective length of query: 158
effective length of database: 14,460,918
effective search space: 2284825044
effective search space used: 2284825044
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.