UPK1B 31341

Name: UPK1B	Sequence: fasta or formatted (260aa)		NCBI GI: 49619237
Description: uroplakin 1B		Referenced in: Integrins Kidney
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 17 2 C cysteine 5.4 14 2 D aspartate 5.0 13 2 E glutamate 3.5 9 1 F phenylalanine 6.9 18 2 G glycine 7.3 19 1 H histidine 1.2 3 1 I isoleucine 6.9 18 2 K lysine 3.5 9 1 L leucine 9.6 25 2 M methionine 3.1 8 1 N asparagine 7.3 19 2 P proline 3.8 10 2 Q glutamine 4.2 11 2 R arginine 3.1 8 1 S serine 4.6 12 2 T threonine 4.6 12 1 V valine 5.4 14 1 W tryptophan 3.8 10 1 Y tyrosine 4.2 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 uroplakin 1B UPK1A 0.348 uroplakin 1A TSPAN18 0.128 tetraspanin 18 isoform 2 TSPAN18 0.126 tetraspanin 18 isoform 1 TSPAN4 0.072 tetraspanin 4 isoform a TSPAN4 0.072 tetraspanin 4 isoform a TSPAN4 0.072 tetraspanin 4 isoform a TSPAN4 0.072 tetraspanin 4 isoform a TSPAN4 0.072 tetraspanin 4 isoform a TSPAN4 0.072 tetraspanin 4 isoform a CD63 0.067 CD63 antigen isoform A CD63 0.065 CD63 antigen isoform B TSPAN4 0.065 tetraspanin 4 isoform b CD53 0.058 CD53 antigen CD53 0.058 CD53 antigen TSPAN17 0.054 transmembrane 4 superfamily member 17 isoform b [Hom... TSPAN9 0.054 tetraspanin 9 TSPAN1 0.052 tetraspan 1 TSPAN14 0.052 tetraspanin 14 isoform 1 CD151 0.050 CD151 antigen CD151 0.050 CD151 antigen CD151 0.050 CD151 antigen CD151 0.050 CD151 antigen TSPAN11 0.050 tetraspanin 11 TSPAN17 0.050 transmembrane 4 superfamily member 17 isoform a [Hom... TSPAN17 0.050 transmembrane 4 superfamily member 17 isoform c [Hom... CD9 0.046 CD9 antigen CD37 0.043 CD37 antigen isoform A TSPAN3 0.041 transmembrane 4 superfamily member 8 isoform 1 TSPAN6 0.041 transmembrane 4 superfamily member 6 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.